ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbah62c20 |
|---|---|
| Clone Library Name | barley_pub |
>ACPH_HUMAN (P13798) Acylamino-acid-releasing enzyme (EC 3.4.19.1) (AARE)| (Acyl-peptide hydrolase) (APH) (Acylaminoacyl-peptidase) (Oxidized protein hydrolase) (OPH) (DNF15S2 protein) Length = 732 Score = 53.9 bits (128), Expect = 2e-07 Identities = 22/59 (37%), Positives = 36/59 (61%) Frame = -1 Query: 442 GGADLRVPASNGLQYARALRERGVEIKTIMFPEDTHEIDIPRSDFESFLNMGVWFRKHL 266 G D RVP G++Y RAL+ R V ++ +++P+ TH + + +SF+N +W R HL Sbjct: 672 GQEDRRVPFKQGMEYYRALKTRNVPVRLLLYPKSTHALSEVEVESDSFMNAVLWLRTHL 730
>ACPH_RAT (P13676) Acylamino-acid-releasing enzyme (EC 3.4.19.1) (AARE)| (Acyl-peptide hydrolase) (APH) (Acylaminoacyl-peptidase) Length = 732 Score = 51.2 bits (121), Expect = 2e-06 Identities = 20/59 (33%), Positives = 35/59 (59%) Frame = -1 Query: 442 GGADLRVPASNGLQYARALRERGVEIKTIMFPEDTHEIDIPRSDFESFLNMGVWFRKHL 266 G D RVP G++Y RAL+ R V ++ +++P+ H + ++ +SF+N +W HL Sbjct: 672 GQEDRRVPFKQGMEYYRALKARNVPVRLLLYPKSNHALSEVEAESDSFMNAVLWLHTHL 730
>APEH_MOUSE (Q8R146) Acylamino-acid-releasing enzyme (EC 3.4.19.1) (AARE)| (Acyl-peptide hydrolase) (APH) (Acylaminoacyl-peptidase) Length = 732 Score = 50.8 bits (120), Expect = 2e-06 Identities = 21/59 (35%), Positives = 34/59 (57%) Frame = -1 Query: 442 GGADLRVPASNGLQYARALRERGVEIKTIMFPEDTHEIDIPRSDFESFLNMGVWFRKHL 266 G D RVP GL+Y AL+ R V ++ +++P+ TH + + +SF+N +W HL Sbjct: 672 GQEDRRVPFKQGLEYYHALKARNVPVRLLLYPKSTHALSEVEVESDSFMNTVLWLHTHL 730
>ACPH_PIG (P19205) Acylamino-acid-releasing enzyme (EC 3.4.19.1) (AARE)| (Acyl-peptide hydrolase) (APH) (Acylaminoacyl-peptidase) Length = 732 Score = 49.3 bits (116), Expect = 6e-06 Identities = 20/59 (33%), Positives = 34/59 (57%) Frame = -1 Query: 442 GGADLRVPASNGLQYARALRERGVEIKTIMFPEDTHEIDIPRSDFESFLNMGVWFRKHL 266 G D RVP G++Y R L+ R V ++ +++P+ TH + + +SF+N +W HL Sbjct: 672 GQEDRRVPFKQGMEYYRVLKARNVPVRLLLYPKSTHALSEVEVESDSFMNAVLWLCTHL 730
>DPP5_ASPFU (O13479) Dipeptidyl-peptidase 5 precursor (EC 3.4.14.-)| (Dipeptidyl-peptidase V) (DPP V) (DppV) Length = 721 Score = 34.3 bits (77), Expect = 0.20 Identities = 16/55 (29%), Positives = 26/55 (47%) Frame = -1 Query: 433 DLRVPASNGLQYARALRERGVEIKTIMFPEDTHEIDIPRSDFESFLNMGVWFRKH 269 D R+P + GL L+ERGV + + FP++ H + P + W K+ Sbjct: 643 DYRLPVAEGLSLFNVLQERGVPSRFLNFPDENHWVVNPENSLVWHQQALGWINKY 697
>DPP5_ASPOR (Q9Y8E3) Dipeptidyl-peptidase 5 precursor (EC 3.4.14.-)| (Dipeptidyl-peptidase V) (DPP V) (DppV) (Alanyl dipeptidyl peptidase) Length = 725 Score = 33.9 bits (76), Expect = 0.26 Identities = 16/55 (29%), Positives = 26/55 (47%) Frame = -1 Query: 433 DLRVPASNGLQYARALRERGVEIKTIMFPEDTHEIDIPRSDFESFLNMGVWFRKH 269 D R+P S GL L+ERGV + + FP++ H + + + W K+ Sbjct: 646 DYRLPVSEGLSLFNILQERGVPSRFLNFPDENHWVQNKENSLVWHQQVLGWLNKY 700
>SPHR_SYNP7 (P39663) Alkaline phosphatase synthesis transcriptional regulatory| protein sphR Length = 257 Score = 32.7 bits (73), Expect = 0.58 Identities = 15/36 (41%), Positives = 20/36 (55%) Frame = -1 Query: 433 DLRVPASNGLQYARALRERGVEIKTIMFPEDTHEID 326 DL +PA NGL + R LR +GV + +M E D Sbjct: 83 DLMLPAVNGLDFCRLLRRQGVTVPILMLSAKDTETD 118
>NARL_SHIFL (P0AF31) Nitrate/nitrite response regulator protein narL| Length = 216 Score = 31.2 bits (69), Expect = 1.7 Identities = 13/37 (35%), Positives = 21/37 (56%) Frame = -1 Query: 433 DLRVPASNGLQYARALRERGVEIKTIMFPEDTHEIDI 323 DL +P NGL+ LRE+ + + ++F HE D+ Sbjct: 59 DLNMPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDV 95
>NARL_ECOLI (P0AF28) Nitrate/nitrite response regulator protein narL| Length = 216 Score = 31.2 bits (69), Expect = 1.7 Identities = 13/37 (35%), Positives = 21/37 (56%) Frame = -1 Query: 433 DLRVPASNGLQYARALRERGVEIKTIMFPEDTHEIDI 323 DL +P NGL+ LRE+ + + ++F HE D+ Sbjct: 59 DLNMPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDV 95
>NARL_ECOL6 (P0AF29) Nitrate/nitrite response regulator protein narL| Length = 216 Score = 31.2 bits (69), Expect = 1.7 Identities = 13/37 (35%), Positives = 21/37 (56%) Frame = -1 Query: 433 DLRVPASNGLQYARALRERGVEIKTIMFPEDTHEIDI 323 DL +P NGL+ LRE+ + + ++F HE D+ Sbjct: 59 DLNMPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDV 95
>NARL_ECO57 (P0AF30) Nitrate/nitrite response regulator protein narL| Length = 216 Score = 31.2 bits (69), Expect = 1.7 Identities = 13/37 (35%), Positives = 21/37 (56%) Frame = -1 Query: 433 DLRVPASNGLQYARALRERGVEIKTIMFPEDTHEIDI 323 DL +P NGL+ LRE+ + + ++F HE D+ Sbjct: 59 DLNMPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDV 95
>DPP5_TRISH (Q8J1L4) Dipeptidyl-peptidase 5 precursor (EC 3.4.14.-)| (Dipeptidyl-peptidase V) (DPP V) (DppV) (Allergen Tri s 4) Length = 726 Score = 31.2 bits (69), Expect = 1.7 Identities = 13/55 (23%), Positives = 27/55 (49%) Frame = -1 Query: 436 ADLRVPASNGLQYARALRERGVEIKTIMFPEDTHEIDIPRSDFESFLNMGVWFRK 272 +D R+ + G+ L+E+G+ + + FP++TH + P + + W K Sbjct: 640 SDFRLSVAEGVGLFNVLQEKGIPSRFLNFPDETHWVTKPENSLVWHQQVLGWINK 694
>DPP5_TRIRU (Q9UW98) Dipeptidyl-peptidase 5 precursor (EC 3.4.14.-)| (Dipeptidyl-peptidase V) (DPP V) (DppV) (Allergen Tri r 4) Length = 726 Score = 30.8 bits (68), Expect = 2.2 Identities = 14/54 (25%), Positives = 26/54 (48%) Frame = -1 Query: 433 DLRVPASNGLQYARALRERGVEIKTIMFPEDTHEIDIPRSDFESFLNMGVWFRK 272 D R+ + G+ L+E+GV + + FP++TH + P + + W K Sbjct: 641 DFRLSVAEGVGLFNVLQEKGVPSRFLNFPDETHWVTKPENSLVWHQQVLGWVNK 694
>DPP5_ARTBE (Q8J1M3) Dipeptidyl-peptidase 5 precursor (EC 3.4.14.-)| (Dipeptidyl-peptidase V) (DPP V) (DppV) (Allergen Tri m 4) Length = 726 Score = 30.8 bits (68), Expect = 2.2 Identities = 13/54 (24%), Positives = 26/54 (48%) Frame = -1 Query: 433 DLRVPASNGLQYARALRERGVEIKTIMFPEDTHEIDIPRSDFESFLNMGVWFRK 272 D R+ + G+ L+E+G+ + + FP++TH + P + + W K Sbjct: 641 DFRLSVAEGVGLFNVLQEKGIPSRFLNFPDETHWVTKPENSLVWHQQVLGWINK 694
>Y809_METJA (Q58219) Hypothetical protein MJ0809| Length = 167 Score = 30.4 bits (67), Expect = 2.9 Identities = 20/89 (22%), Positives = 43/89 (48%), Gaps = 14/89 (15%) Frame = +2 Query: 131 WEKYILVVDPQNASVASQKDKITKKLRSSVAMSRKLPKLSGSDLLEM------------- 271 ++KYI ++ ++ + +K + K+L + + + +LS D+LE+ Sbjct: 62 FKKYIERLEKKDKLIEIEKIE-EKRLNTYIEFPEGISRLSSDDILELNKKLDEGVKYIKL 120 Query: 272 -FPEPDSHVEEALEVRPRYIDFVRVLWEH 355 F E + H + LE++ ++ V +L EH Sbjct: 121 IFAELEEHKKVLLEIKDMHVKTVEILSEH 149
>XYNB_BUTFI (P26223) Endo-1,4-beta-xylanase B (EC 3.2.1.8) (Xylanase B)| (1,4-beta-D-xylan xylanohydrolase B) Length = 635 Score = 30.4 bits (67), Expect = 2.9 Identities = 14/44 (31%), Positives = 21/44 (47%) Frame = -1 Query: 433 DLRVPASNGLQYARALRERGVEIKTIMFPEDTHEIDIPRSDFES 302 D VP N +A ALRE+ + +FP H + + +F S Sbjct: 573 DSVVPVENSYLFANALREKKIPFAHYVFPRGFHGLTVANDEFFS 616
>NMT_AJECA (P34763) Glycylpeptide N-tetradecanoyltransferase (EC 2.3.1.97)| (Peptide N-myristoyltransferase) (Myristoyl-CoA:protein N-myristoyltransferase) (NMT) Length = 529 Score = 30.0 bits (66), Expect = 3.7 Identities = 19/65 (29%), Positives = 32/65 (49%) Frame = -2 Query: 360 PSCSQRTRTKSIYRGRTSRASSTWESGSGNISSRSDPESFGSFLDIATELRSFLVILSFC 181 P+ SQ T + G+ + SS + + N +++ P S L++ LRS L + Sbjct: 28 PTTSQSTNASTGTAGKGEKKSSDGDPAAANPATKLTPSMAESLLELNPALRSELAGMDKE 87 Query: 180 EATEA 166 +ATEA Sbjct: 88 KATEA 92
>DHE4_SCHPO (P78804) NADP-specific glutamate dehydrogenase (EC 1.4.1.4)| (NADP-GDH) (NADP-dependent glutamate dehydrogenase) Length = 451 Score = 29.6 bits (65), Expect = 4.9 Identities = 15/43 (34%), Positives = 24/43 (55%) Frame = -2 Query: 333 KSIYRGRTSRASSTWESGSGNISSRSDPESFGSFLDIATELRS 205 ++I+ T AS +SGS NI S D + FL +AT +++ Sbjct: 404 QNIFEQSTDVASKYCDSGSNNIPSLVDGANIAGFLKVATAMQA 446
>LRRK2_MOUSE (Q5S006) Leucine-rich repeat serine/threonine-protein kinase 2 (EC| 2.7.11.1) Length = 2527 Score = 29.3 bits (64), Expect = 6.4 Identities = 16/48 (33%), Positives = 24/48 (50%) Frame = -2 Query: 273 NISSRSDPESFGSFLDIATELRSFLVILSFCEATEAF*GSTTSIYFSQ 130 N+S P G FL+ +++ SF ++F A A S TS+ SQ Sbjct: 1135 NLSKNHIPSLPGDFLEACSKVESFSARMNFLAAMPALPSSITSLKLSQ 1182
>MYO7A_MOUSE (P97479) Myosin-7A (Myosin VIIa)| Length = 2215 Score = 29.3 bits (64), Expect = 6.4 Identities = 12/28 (42%), Positives = 16/28 (57%) Frame = +3 Query: 150 LSILKMLQSPHRKTKSPRSFEVLWLCRG 233 + ILK L H + R +E+LWLC G Sbjct: 1815 VQILKQLTDNHIRYSEERGWELLWLCTG 1842
>MYO7A_HUMAN (Q13402) Myosin-7A (Myosin VIIa)| Length = 2215 Score = 29.3 bits (64), Expect = 6.4 Identities = 12/28 (42%), Positives = 16/28 (57%) Frame = +3 Query: 150 LSILKMLQSPHRKTKSPRSFEVLWLCRG 233 + ILK L H + R +E+LWLC G Sbjct: 1815 VQILKQLTDNHIRYSEERGWELLWLCTG 1842
>Y4NM_RHISN (P55585) Hypothetical 57.3 kDa protein y4nM| Length = 516 Score = 29.3 bits (64), Expect = 6.4 Identities = 18/53 (33%), Positives = 29/53 (54%) Frame = -1 Query: 424 VPASNGLQYARALRERGVEIKTIMFPEDTHEIDIPRSDFESFLNMGVWFRKHL 266 V +G+++ LRE GVE++T+ PE +H P D+ S L + W + L Sbjct: 197 VLVGDGVKFESKLREAGVEVRTLS-PEKSH----PVKDWLSELRIHQWSKNVL 244
>YMT4_YEAST (Q04213) Hypothetical 55.4 kDa protein in MCM1-NUP116 intergenic| region Length = 475 Score = 28.9 bits (63), Expect = 8.3 Identities = 16/42 (38%), Positives = 22/42 (52%) Frame = -2 Query: 384 EKEESRSKPSCSQRTRTKSIYRGRTSRASSTWESGSGNISSR 259 E+EE ++P T+S R R RAS T +S GN + R Sbjct: 186 EEEEEENEPEKKAIRPTRSSSRQRQKRASETEKSEGGNSNKR 227
>FBX38_MOUSE (Q8BMI0) F-box only protein 38 (Modulator of KLF7 activity) (MoKA)| Length = 1194 Score = 28.9 bits (63), Expect = 8.3 Identities = 16/55 (29%), Positives = 27/55 (49%) Frame = -2 Query: 381 KEESRSKPSCSQRTRTKSIYRGRTSRASSTWESGSGNISSRSDPESFGSFLDIAT 217 K + ++ S++ ++K +Y +S +SST S +GN SS S F T Sbjct: 684 KADMKAARDVSEKKKSKDVYPSCSSSSSSTAASTAGNASSPSTASQSPDFARTVT 738
>YGFK_ECOLI (Q46811) Hypothetical protein ygfK| Length = 1032 Score = 28.9 bits (63), Expect = 8.3 Identities = 16/39 (41%), Positives = 22/39 (56%) Frame = -1 Query: 391 ALRERGVEIKTIMFPEDTHEIDIPRSDFESFLNMGVWFR 275 ALR GVE TI++ E+ R ++E L+ GV FR Sbjct: 697 ALRVPGVEKATIVYRRSLQEMPAWREEYEEALHDGVEFR 735
>HAM1_CHLTE (Q8KFJ6) HAM1 protein homolog| Length = 226 Score = 28.9 bits (63), Expect = 8.3 Identities = 14/46 (30%), Positives = 25/46 (54%) Frame = +2 Query: 185 KDKITKKLRSSVAMSRKLPKLSGSDLLEMFPEPDSHVEEALEVRPR 322 K K T + R+ +AM +LP +GS +E+ D H++ + P+ Sbjct: 127 KSKRTARFRTVIAMKGRLPAANGS-AVEIEETTDGHIDGLITTEPK 171
>MKL_MYCTU (P63357) Probable ribonucleotide transport ATP-binding protein mkl| Length = 359 Score = 28.9 bits (63), Expect = 8.3 Identities = 16/32 (50%), Positives = 20/32 (62%) Frame = -1 Query: 340 THEIDIPRSDFESFLNMGVWFRKHLKQI*PRE 245 TH I+I R+ + NMG+ FRKHL PRE Sbjct: 221 THNINIARTVPD---NMGMLFRKHLVMFGPRE 249
>MKL_MYCBO (P63358) Probable ribonucleotide transport ATP-binding protein mkl| Length = 359 Score = 28.9 bits (63), Expect = 8.3 Identities = 16/32 (50%), Positives = 20/32 (62%) Frame = -1 Query: 340 THEIDIPRSDFESFLNMGVWFRKHLKQI*PRE 245 TH I+I R+ + NMG+ FRKHL PRE Sbjct: 221 THNINIARTVPD---NMGMLFRKHLVMFGPRE 249 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 72,715,430 Number of Sequences: 219361 Number of extensions: 1423979 Number of successful extensions: 4913 Number of sequences better than 10.0: 28 Number of HSP's better than 10.0 without gapping: 4746 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4912 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3696665728 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
