ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbah62c20
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ref|NM_196492.1| Oryza sativa (japonica cultivar-group) putative... 167 4e-38
2dbj|AK066318.1| Oryza sativa (japonica cultivar-group) cDNA clon... 167 4e-38
3dbj|AK061694.1| Oryza sativa (japonica cultivar-group) cDNA clon... 167 4e-38
4gb|AY110152.1| Zea mays CL9977_1 mRNA sequence 145 2e-31
5dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 64 5e-07
6gb|AF229187.1|AF229187 Oryza sativa subsp. japonica BAC clone nb... 64 5e-07
7gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 64 5e-07
8gb|AF475113.1| Triticum aestivum histone acetyltransferase mRNA,... 56 1e-04
9gb|AC135288.1| Solanum demissum chromosome 5 BAC PGEC219 genomic... 44 0.44
10gb|AC118695.10| Mus musculus chromosome 19, clone RP24-62C10, co... 42 1.7
11gb|AY710429.1| Cryptococcus gattii strain E566 MATa locus, compl... 40 6.9
12gb|BT018357.1| Zea mays clone EL01T0404A12.c mRNA sequence 40 6.9
13gb|AC123694.11| Mus musculus chromosome 10, clone RP23-326O5, co... 40 6.9
14ref|XM_709207.1| Candida albicans SC5314 hypothetical protein (C... 40 6.9
15ref|XM_708931.1| Candida albicans SC5314 hypothetical protein (C... 40 6.9
16emb|AL138721.16| Human DNA sequence from clone RP11-174N3 on chr... 40 6.9
17emb|AL133321.11| Human DNA sequence from clone RP13-17E1 on chro... 40 6.9
18gb|AC009630.14| Homo sapiens chromosome 8, clone RP11-360L9, com... 40 6.9
19gb|AF386920.1| Bovine rotavirus strain B8 outer capsid protein V... 40 6.9
20gb|AF386916.1| Bovine rotavirus strain Hg2 outer capsid protein ... 40 6.9
21gb|AC097533.2| Homo sapiens BAC clone RP11-770K15 from 4, comple... 40 6.9
22emb|BX005328.9| Zebrafish DNA sequence from clone DKEY-63D15 in ... 40 6.9
23gb|AC079447.4| Homo sapiens BAC clone RP11-111H13 from 2, comple... 40 6.9
24emb|CR749772.5| Zebrafish DNA sequence from clone DKEY-260P18 in... 40 6.9
25emb|BX545847.9| Zebrafish DNA sequence from clone RP71-14M1 in l... 40 6.9
26emb|BX908748.7| Zebrafish DNA sequence from clone CH211-215D8 in... 40 6.9
27gb|AY105542.1| Zea mays PCO091746 mRNA sequence 40 6.9
28gb|AC175032.1| Mus musculus BAC clone RP24-222L21 from chromosom... 40 6.9
29gb|AC174723.2| Mus musculus BAC clone RP23-93L3 from chromosome ... 40 6.9
30dbj|D14033.1|ROHVP7P Human rotavirus gene for VP7 protein, compl... 40 6.9
31gb|AC174479.2| Mus musculus BAC clone RP23-100J17 from chromosom... 40 6.9
32emb|CT025547.17| Mouse DNA sequence from clone RP24-111B7 on chr... 40 6.9
33gb|AC165285.2| Mus musculus BAC clone RP24-235I1 from chromosome... 40 6.9

>ref|NM_196492.1| Oryza sativa (japonica cultivar-group) putative
            acylaminoacyl-peptidase like protein (OSJNBa0032I20.5),
            mRNA
          Length = 2406

 Score =  167 bits (84), Expect = 4e-38
 Identities = 197/234 (84%), Gaps = 1/234 (0%)
 Strand = Plus / Minus

                                                                        
Query: 267  agatgtttcctgaaccagactcccatgttgaggaagctctcgaagtccgaccgcggtata 326
            ||||| ||| |||||||||| || ||||||||||||||||| || |||||  | ||||| 
Sbjct: 2375 agatgcttcttgaaccagacaccaatgttgaggaagctctcaaaatccgattgtggtatg 2316

                                                                        
Query: 327  tcgatttcgtgcgtgtcctctgggaacatgatggttttgatctcgactcctctttctctc 386
            | |||||| ||  |||| ||||||||||| ||| |  |||||||| | ||||||||||||
Sbjct: 2315 ttgatttcatgtatgtcgtctgggaacatcatgatcctgatctcgccgcctctttctctc 2256

                                                                        
Query: 387  agagcccttgcgtactgtaggccattggaagcgggcacccgaagatccgctcccccgaga 446
            ||||| |||||||||||||||||||| |||  ||| || |||||||| ||||| || |||
Sbjct: 2255 agagctcttgcgtactgtaggccattagaaatggggactcgaagatctgctcctccaaga 2196

                                                                  
Query: 447  agcataagcaanaggcgctttcacttttgaaatgtgggcaattggngatttctg 500
            ||||||||| |  ||||||||||| || ||||| ||||||||||| ||||||||
Sbjct: 2195 agcataagc-aggggcgctttcaccttcgaaatatgggcaattggtgatttctg 2143



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>dbj|AK066318.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013067G13, full
            insert sequence
          Length = 2732

 Score =  167 bits (84), Expect = 4e-38
 Identities = 197/234 (84%), Gaps = 1/234 (0%)
 Strand = Plus / Minus

                                                                        
Query: 267  agatgtttcctgaaccagactcccatgttgaggaagctctcgaagtccgaccgcggtata 326
            ||||| ||| |||||||||| || ||||||||||||||||| || |||||  | ||||| 
Sbjct: 2427 agatgcttcttgaaccagacaccaatgttgaggaagctctcaaaatccgattgtggtatg 2368

                                                                        
Query: 327  tcgatttcgtgcgtgtcctctgggaacatgatggttttgatctcgactcctctttctctc 386
            | |||||| ||  |||| ||||||||||| ||| |  |||||||| | ||||||||||||
Sbjct: 2367 ttgatttcatgtatgtcgtctgggaacatcatgatcctgatctcgccgcctctttctctc 2308

                                                                        
Query: 387  agagcccttgcgtactgtaggccattggaagcgggcacccgaagatccgctcccccgaga 446
            ||||| |||||||||||||||||||| |||  ||| || |||||||| ||||| || |||
Sbjct: 2307 agagctcttgcgtactgtaggccattagaaatggggactcgaagatctgctcctccaaga 2248

                                                                  
Query: 447  agcataagcaanaggcgctttcacttttgaaatgtgggcaattggngatttctg 500
            ||||||||| |  ||||||||||| || ||||| ||||||||||| ||||||||
Sbjct: 2247 agcataagc-aggggcgctttcaccttcgaaatatgggcaattggtgatttctg 2195



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>dbj|AK061694.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-037-C07, full
            insert sequence
          Length = 1252

 Score =  167 bits (84), Expect = 4e-38
 Identities = 197/234 (84%), Gaps = 1/234 (0%)
 Strand = Plus / Minus

                                                                        
Query: 267  agatgtttcctgaaccagactcccatgttgaggaagctctcgaagtccgaccgcggtata 326
            ||||| ||| |||||||||| || ||||||||||||||||| || |||||  | ||||| 
Sbjct: 1054 agatgcttcttgaaccagacaccaatgttgaggaagctctcaaaatccgattgtggtatg 995

                                                                        
Query: 327  tcgatttcgtgcgtgtcctctgggaacatgatggttttgatctcgactcctctttctctc 386
            | |||||| ||  |||| ||||||||||| ||| |  |||||||| | ||||||||||||
Sbjct: 994  ttgatttcatgtatgtcgtctgggaacatcatgatcctgatctcgccgcctctttctctc 935

                                                                        
Query: 387  agagcccttgcgtactgtaggccattggaagcgggcacccgaagatccgctcccccgaga 446
            ||||| |||||||||||||||||||| |||  ||| || |||||||| ||||| || |||
Sbjct: 934  agagctcttgcgtactgtaggccattagaaatggggactcgaagatctgctcctccaaga 875

                                                                  
Query: 447  agcataagcaanaggcgctttcacttttgaaatgtgggcaattggngatttctg 500
            ||||||||| |  ||||||||||| || ||||| ||||||||||| ||||||||
Sbjct: 874  agcataagc-aggggcgctttcaccttcgaaatatgggcaattggtgatttctg 822



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>gb|AY110152.1| Zea mays CL9977_1 mRNA sequence
          Length = 551

 Score =  145 bits (73), Expect = 2e-31
 Identities = 148/173 (85%)
 Strand = Plus / Plus

                                                                       
Query: 267 agatgtttcctgaaccagactcccatgttgaggaagctctcgaagtccgaccgcggtata 326
           ||||||||| ||||||| || || |||||||||||||| ||||| || |||||||||| |
Sbjct: 277 agatgtttcttgaaccataccccaatgttgaggaagctttcgaaatcggaccgcggtaaa 336

                                                                       
Query: 327 tcgatttcgtgcgtgtcctctgggaacatgatggttttgatctcgactcctctttctctc 386
           | |||||||||  |||||||||||||||| ||| ||||||  ||| ||||||||||| ||
Sbjct: 337 ttgatttcgtgtatgtcctctgggaacatcatgattttgacatcgcctcctctttctatc 396

                                                                
Query: 387 agagcccttgcgtactgtaggccattggaagcgggcacccgaagatccgctcc 439
           ||   ||||||||||||||||||||| ||||| ||||| ||||| || |||||
Sbjct: 397 aggctccttgcgtactgtaggccattagaagcaggcactcgaaggtcagctcc 449



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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 56/64 (87%)
 Strand = Plus / Minus

                                                                            
Query: 340      tgtcctctgggaacatgatggttttgatctcgactcctctttctctcagagcccttgcgt 399
                |||| ||||||||||| ||| |  |||||||| | ||||||||||||||||| |||||||
Sbjct: 14034304 tgtcgtctgggaacatcatgatcctgatctcgccgcctctttctctcagagctcttgcgt 14034245

                    
Query: 400      actg 403
                ||||
Sbjct: 14034244 actg 14034241



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Minus

                                                                  
Query: 267      agatgtttcctgaaccagactcccatgttgaggaagctctcgaagtccga 316
                ||||| ||| |||||||||| || ||||||||||||||||| || |||||
Sbjct: 14034531 agatgcttcttgaaccagacaccaatgttgaggaagctctcaaaatccga 14034482



 Score = 48.1 bits (24), Expect = 0.028
 Identities = 48/56 (85%)
 Strand = Plus / Minus

                                                                        
Query: 401      ctgtaggccattggaagcgggcacccgaagatccgctcccccgagaagcataagca 456
                |||||||||||| |||  ||| || |||||||| ||||| || |||||||||||||
Sbjct: 14033995 ctgtaggccattagaaatggggactcgaagatctgctcctccaagaagcataagca 14033940



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>gb|AF229187.1|AF229187 Oryza sativa subsp. japonica BAC clone nbxb0032I20, complete sequence
          Length = 144651

 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 56/64 (87%)
 Strand = Plus / Minus

                                                                         
Query: 340   tgtcctctgggaacatgatggttttgatctcgactcctctttctctcagagcccttgcgt 399
             |||| ||||||||||| ||| |  |||||||| | ||||||||||||||||| |||||||
Sbjct: 50433 tgtcgtctgggaacatcatgatcctgatctcgccgcctctttctctcagagctcttgcgt 50374

                 
Query: 400   actg 403
             ||||
Sbjct: 50373 actg 50370



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Minus

                                                               
Query: 267   agatgtttcctgaaccagactcccatgttgaggaagctctcgaagtccga 316
             ||||| ||| |||||||||| || ||||||||||||||||| || |||||
Sbjct: 50660 agatgcttcttgaaccagacaccaatgttgaggaagctctcaaaatccga 50611



 Score = 48.1 bits (24), Expect = 0.028
 Identities = 48/56 (85%)
 Strand = Plus / Minus

                                                                     
Query: 401   ctgtaggccattggaagcgggcacccgaagatccgctcccccgagaagcataagca 456
             |||||||||||| |||  ||| || |||||||| ||||| || |||||||||||||
Sbjct: 50124 ctgtaggccattagaaatggggactcgaagatctgctcctccaagaagcataagca 50069



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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 56/64 (87%)
 Strand = Plus / Minus

                                                                            
Query: 340      tgtcctctgggaacatgatggttttgatctcgactcctctttctctcagagcccttgcgt 399
                |||| ||||||||||| ||| |  |||||||| | ||||||||||||||||| |||||||
Sbjct: 14042546 tgtcgtctgggaacatcatgatcctgatctcgccgcctctttctctcagagctcttgcgt 14042487

                    
Query: 400      actg 403
                ||||
Sbjct: 14042486 actg 14042483



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Minus

                                                                  
Query: 267      agatgtttcctgaaccagactcccatgttgaggaagctctcgaagtccga 316
                ||||| ||| |||||||||| || ||||||||||||||||| || |||||
Sbjct: 14042773 agatgcttcttgaaccagacaccaatgttgaggaagctctcaaaatccga 14042724



 Score = 48.1 bits (24), Expect = 0.028
 Identities = 48/56 (85%)
 Strand = Plus / Minus

                                                                        
Query: 401      ctgtaggccattggaagcgggcacccgaagatccgctcccccgagaagcataagca 456
                |||||||||||| |||  ||| || |||||||| ||||| || |||||||||||||
Sbjct: 14042237 ctgtaggccattagaaatggggactcgaagatctgctcctccaagaagcataagca 14042182



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>gb|AF475113.1| Triticum aestivum histone acetyltransferase mRNA, partial cds
          Length = 339

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 43/48 (89%)
 Strand = Plus / Plus

                                                           
Query: 28  ctactccacaaacagaagccaaactcacattgcccaggctgcgtcaac 75
           ||||| |||||| |||| |||| ||||| |||||||||||||||||||
Sbjct: 282 ctacttcacaaatagaatccaatctcaccttgcccaggctgcgtcaac 329



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>gb|AC135288.1| Solanum demissum chromosome 5 BAC PGEC219 genomic sequence, complete
             sequence
          Length = 124895

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 118   tacgctcataatttgggagaaa 139
             ||||||||||||||||||||||
Sbjct: 28673 tacgctcataatttgggagaaa 28652



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>gb|AC118695.10| Mus musculus chromosome 19, clone RP24-62C10, complete sequence
          Length = 261979

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 193    aatcaccaagaagcttcgaagttct 217
              |||||||||||||||||| ||||||
Sbjct: 138503 aatcaccaagaagcttcggagttct 138527



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>gb|AY710429.1| Cryptococcus gattii strain E566 MATa locus, complete sequence
          Length = 144400

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 361    ttttgatctcgactcctctttctctcag 388
              |||||||| |||| ||||||||||||||
Sbjct: 105605 ttttgatcgcgacccctctttctctcag 105578



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>gb|BT018357.1| Zea mays clone EL01T0404A12.c mRNA sequence
          Length = 712

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 389 agcccttgcgtactgtaggccatt 412
           ||||||||||||||| ||||||||
Sbjct: 345 agcccttgcgtactgcaggccatt 322



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>gb|AC123694.11| Mus musculus chromosome 10, clone RP23-326O5, complete sequence
          Length = 214111

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 123    tcataatttgggagaaatat 142
              ||||||||||||||||||||
Sbjct: 119643 tcataatttgggagaaatat 119624



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>ref|XM_709207.1| Candida albicans SC5314 hypothetical protein (CaO19.91), mRNA
          Length = 900

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 97  gttcatttttatcaatctctttacgctc 124
           |||| |||||||||||||||||| ||||
Sbjct: 253 gttcctttttatcaatctctttatgctc 226



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>ref|XM_708931.1| Candida albicans SC5314 hypothetical protein (CaO19.7737), mRNA
          Length = 900

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 97  gttcatttttatcaatctctttacgctc 124
           |||| |||||||||||||||||| ||||
Sbjct: 253 gttcctttttatcaatctctttatgctc 226



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>emb|AL138721.16| Human DNA sequence from clone RP11-174N3 on chromosome 6 Contains the
             3' end of gene KIAA0229 for a novel Ank, SAM (Sterile
             alpha motif) and Phosphotyrosine interaction (PTB/PID)
             domain containing protein, the TCP11 gene for t-complex 11
             (mouse) and two CpG islands, complete sequence
          Length = 155539

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 91    gatgctgttcatttttatcaatct 114
             |||||||||||||||| |||||||
Sbjct: 45549 gatgctgttcatttttttcaatct 45526



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>emb|AL133321.11| Human DNA sequence from clone RP13-17E1 on chromosome X Contains part
             of the PCDH11X gene for protocadherin 11 X-linked,
             complete sequence
          Length = 170805

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 125   ataatttgggagaaatatat 144
             ||||||||||||||||||||
Sbjct: 10084 ataatttgggagaaatatat 10065



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>gb|AC009630.14| Homo sapiens chromosome 8, clone RP11-360L9, complete sequence
          Length = 219622

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 186   aagacaaaatcaccaagaag 205
             ||||||||||||||||||||
Sbjct: 85496 aagacaaaatcaccaagaag 85477



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>gb|AF386920.1| Bovine rotavirus strain B8 outer capsid protein VP7 gene, complete
           cds
          Length = 1062

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 25  ctactactccacaaacagaa 44
           ||||||||||||||||||||
Sbjct: 875 ctactactccacaaacagaa 894



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>gb|AF386916.1| Bovine rotavirus strain Hg2 outer capsid protein VP7 gene, complete
           cds
          Length = 1062

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 25  ctactactccacaaacagaa 44
           ||||||||||||||||||||
Sbjct: 875 ctactactccacaaacagaa 894



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>gb|AC097533.2| Homo sapiens BAC clone RP11-770K15 from 4, complete sequence
          Length = 174696

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 373    ctcctctttctctcagagcc 392
              ||||||||||||||||||||
Sbjct: 114528 ctcctctttctctcagagcc 114509



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>emb|BX005328.9| Zebrafish DNA sequence from clone DKEY-63D15 in linkage group 8, complete
              sequence
          Length = 272840

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 376    ctctttctctcagagccctt 395
              ||||||||||||||||||||
Sbjct: 180267 ctctttctctcagagccctt 180248



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>gb|AC079447.4| Homo sapiens BAC clone RP11-111H13 from 2, complete sequence
          Length = 175567

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 180    cacagaaagacaaaatcacc 199
              ||||||||||||||||||||
Sbjct: 108611 cacagaaagacaaaatcacc 108630



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>emb|CR749772.5| Zebrafish DNA sequence from clone DKEY-260P18 in linkage group 19,
             complete sequence
          Length = 91686

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 96    tgttcatttttatcaatctcttta 119
             ||||||||||||||||| ||||||
Sbjct: 91182 tgttcatttttatcaatttcttta 91205



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>emb|BX545847.9| Zebrafish DNA sequence from clone RP71-14M1 in linkage group 19, complete
              sequence
          Length = 128770

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 96     tgttcatttttatcaatctcttta 119
              ||||||||||||||||| ||||||
Sbjct: 127275 tgttcatttttatcaatttcttta 127252



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>emb|BX908748.7| Zebrafish DNA sequence from clone CH211-215D8 in linkage group 18,
              complete sequence
          Length = 212425

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 373    ctcctctttctctcagagcc 392
              ||||||||||||||||||||
Sbjct: 171347 ctcctctttctctcagagcc 171328



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>gb|AY105542.1| Zea mays PCO091746 mRNA sequence
          Length = 951

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 389 agcccttgcgtactgtaggccatt 412
           ||||||||||||||| ||||||||
Sbjct: 900 agcccttgcgtactgcaggccatt 877



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>gb|AC175032.1| Mus musculus BAC clone RP24-222L21 from chromosome 14, complete
             sequence
          Length = 204872

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 49    aactcacattgcccaggctg 68
             ||||||||||||||||||||
Sbjct: 71591 aactcacattgcccaggctg 71610



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>gb|AC174723.2| Mus musculus BAC clone RP23-93L3 from chromosome 14, complete sequence
          Length = 153644

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 49    aactcacattgcccaggctg 68
             ||||||||||||||||||||
Sbjct: 85070 aactcacattgcccaggctg 85089



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>dbj|D14033.1|ROHVP7P Human rotavirus gene for VP7 protein, complete cds
          Length = 1062

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 25  ctactactccacaaacagaa 44
           ||||||||||||||||||||
Sbjct: 875 ctactactccacaaacagaa 894



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>gb|AC174479.2| Mus musculus BAC clone RP23-100J17 from chromosome 14, complete
             sequence
          Length = 185390

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 49    aactcacattgcccaggctg 68
             ||||||||||||||||||||
Sbjct: 83975 aactcacattgcccaggctg 83956



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>emb|CT025547.17| Mouse DNA sequence from clone RP24-111B7 on chromosome 14, complete
              sequence
          Length = 178908

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 339    gtgtcctctgggaacatgat 358
              ||||||||||||||||||||
Sbjct: 157784 gtgtcctctgggaacatgat 157765



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>gb|AC165285.2| Mus musculus BAC clone RP24-235I1 from chromosome 14, complete sequence
          Length = 171474

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 49     aactcacattgcccaggctg 68
              ||||||||||||||||||||
Sbjct: 121199 aactcacattgcccaggctg 121218


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,069,266
Number of Sequences: 3902068
Number of extensions: 5069266
Number of successful extensions: 105498
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 105363
Number of HSP's gapped (non-prelim): 132
length of query: 508
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 486
effective length of database: 17,147,199,772
effective search space: 8333539089192
effective search space used: 8333539089192
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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