Clone Name | rbah61n19 |
---|---|
Clone Library Name | barley_pub |
>RCAA_HORVU (Q40073) Ribulose bisphosphate carboxylase/oxygenase activase A,| chloroplast precursor (RuBisCO activase A) (RA A) Length = 464 Score = 328 bits (841), Expect = 7e-90 Identities = 160/160 (100%), Positives = 160/160 (100%) Frame = -1 Query: 606 VCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLV 427 VCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLV Sbjct: 305 VCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLV 364 Query: 426 NSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGS 247 NSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGS Sbjct: 365 NSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGS 424 Query: 246 FYGKGAQQGTLPVPEGCTDQNAKNYDPTARSDDGSCLYTF 127 FYGKGAQQGTLPVPEGCTDQNAKNYDPTARSDDGSCLYTF Sbjct: 425 FYGKGAQQGTLPVPEGCTDQNAKNYDPTARSDDGSCLYTF 464
>RCA_ARATH (P10896) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 474 Score = 256 bits (653), Expect = 5e-68 Identities = 121/160 (75%), Positives = 140/160 (87%) Frame = -1 Query: 606 VCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLV 427 VCKGIF+TD + DE +V +VD FPGQSIDFFGALRARVYDDEVRK+V S G+E IGKRLV Sbjct: 315 VCKGIFRTDKIKDEDIVTLVDQFPGQSIDFFGALRARVYDDEVRKFVESLGVEKIGKRLV 374 Query: 426 NSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGS 247 NSR+GP FEQP+MT EKL+EYG+MLV EQ+NVKRVQLA+TY+SQAALGDAN DA+ G+ Sbjct: 375 NSREGPPVFEQPEMTYEKLMEYGNMLVMEQENVKRVQLAETYLSQAALGDANADAIGRGT 434 Query: 246 FYGKGAQQGTLPVPEGCTDQNAKNYDPTARSDDGSCLYTF 127 FYGKGAQQ LPVPEGCTD A+N+DPTARSDDG+C+Y F Sbjct: 435 FYGKGAQQVNLPVPEGCTDPVAENFDPTARSDDGTCVYNF 474
>RCA1_LARTR (Q7X9A0) Ribulose bisphosphate carboxylase/oxygenase activase 1,| chloroplast precursor (RuBisCO activase 1) (RA 1) (RubisCO activase alpha form) Length = 476 Score = 255 bits (651), Expect = 8e-68 Identities = 121/162 (74%), Positives = 140/162 (86%), Gaps = 2/162 (1%) Frame = -1 Query: 606 VCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLV 427 VCKGIF+TDNV+D+ +VK+VDTFPGQSIDFFGALRARVY DEVRKWV G++ IGK+LV Sbjct: 315 VCKGIFRTDNVADDDIVKLVDTFPGQSIDFFGALRARVYHDEVRKWVSEVGVDTIGKKLV 374 Query: 426 NSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGS 247 NS++GP +FEQPKMT++KLL YG MLVQEQ+NVKRVQLAD YMS+AALGDAN DA+K G+ Sbjct: 375 NSKEGPPSFEQPKMTIDKLLGYGGMLVQEQENVKRVQLADKYMSEAALGDANNDAIKRGT 434 Query: 246 FYGKGAQQ--GTLPVPEGCTDQNAKNYDPTARSDDGSCLYTF 127 FYG A Q G +PVPEGCTD A NYDPTARSDDGSC+Y F Sbjct: 435 FYGGQAAQQVGNVPVPEGCTDPQATNYDPTARSDDGSCVYKF 476
>RCA_SPIOL (P10871) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 472 Score = 251 bits (641), Expect = 1e-66 Identities = 118/158 (74%), Positives = 137/158 (86%) Frame = -1 Query: 606 VCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLV 427 VC GIF+TD V E VVK+VD FPGQSIDFFGALRARVY DEVRKWV S G++N+GK+LV Sbjct: 313 VCTGIFKTDKVPAEHVVKLVDAFPGQSIDFFGALRARVYHDEVRKWVNSVGVDNVGKKLV 372 Query: 426 NSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGS 247 NS+DGP FEQP+MT++KL+EYG+MLVQEQ+NVKRVQLAD YMS AALGDAN+DA+ G+ Sbjct: 373 NSKDGPPVFEQPEMTLQKLMEYGNMLVQEQENVKRVQLADQYMSSAALGDANKDAIDRGT 432 Query: 246 FYGKGAQQGTLPVPEGCTDQNAKNYDPTARSDDGSCLY 133 F+GK AQQ +LPV +GCTD AKNYDPTARSDDGSC Y Sbjct: 433 FFGKAAQQVSLPVAQGCTDPEAKNYDPTARSDDGSCTY 470
>RCAB_HORVU (Q42450) Ribulose bisphosphate carboxylase/oxygenase activase B,| chloroplast precursor (RuBisCO activase B) (RA B) Length = 425 Score = 220 bits (560), Expect = 3e-57 Identities = 103/124 (83%), Positives = 116/124 (93%) Frame = -1 Query: 606 VCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLV 427 VCKGIF+TDNV DE+VV++VDTFPGQSIDFFGALRARVYDDEVRKWVG G+ENI KRLV Sbjct: 302 VCKGIFRTDNVPDEAVVRLVDTFPGQSIDFFGALRARVYDDEVRKWVGEIGVENISKRLV 361 Query: 426 NSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGS 247 NSR+GP TF+QPKMT+EKL+EYGHMLVQEQ+NVKRVQLAD Y+S+AALG AN DAMKTG+ Sbjct: 362 NSREGPPTFDQPKMTIEKLMEYGHMLVQEQENVKRVQLADKYLSEAALGQANDDAMKTGA 421 Query: 246 FYGK 235 FYGK Sbjct: 422 FYGK 425
>RCA_ORYSA (P93431) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 432 Score = 217 bits (552), Expect = 2e-56 Identities = 102/123 (82%), Positives = 115/123 (93%) Frame = -1 Query: 606 VCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLV 427 VCKGIF+TDNV DE +VKIVD+FPGQSIDFFGALRARVYDDEVRKWV TG+ENIGKRLV Sbjct: 305 VCKGIFRTDNVPDEDIVKIVDSFPGQSIDFFGALRARVYDDEVRKWVSDTGVENIGKRLV 364 Query: 426 NSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGS 247 NSR+GP FEQPKMT+EKL+EYG+MLV+EQ+NVKRVQLA+ Y+S+AALGDAN DAMKTGS Sbjct: 365 NSREGPPEFEQPKMTIEKLIEYGYMLVKEQENVKRVQLAEQYLSEAALGDANSDAMKTGS 424 Query: 246 FYG 238 FYG Sbjct: 425 FYG 427
>RCA_MALDO (Q40281) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 437 Score = 205 bits (522), Expect = 7e-53 Identities = 95/123 (77%), Positives = 113/123 (91%) Frame = -1 Query: 606 VCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLV 427 VC GIF++DNV+ E +VK+VDTFPGQSIDFFGALRARVYDDEVRKW+ G+++IGK+LV Sbjct: 315 VCIGIFRSDNVAKEDIVKLVDTFPGQSIDFFGALRARVYDDEVRKWITGVGVDSIGKKLV 374 Query: 426 NSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGS 247 NS++GP TFEQPKMT+EKLLEYG+MLVQEQ+NVKRVQLAD Y+S+AALGDAN DAM TG+ Sbjct: 375 NSKEGPPTFEQPKMTIEKLLEYGNMLVQEQENVKRVQLADKYLSEAALGDANSDAMNTGT 434 Query: 246 FYG 238 FYG Sbjct: 435 FYG 437
>RCA_MAIZE (Q9ZT00) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 433 Score = 204 bits (520), Expect = 1e-52 Identities = 94/122 (77%), Positives = 113/122 (92%) Frame = -1 Query: 606 VCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLV 427 VCKGIF+TD V +E VV++VDTFPGQSIDFFGALRARVYDDEVR+WV TG+ENI ++LV Sbjct: 311 VCKGIFRTDGVDEEHVVQLVDTFPGQSIDFFGALRARVYDDEVRRWVSETGVENIARKLV 370 Query: 426 NSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGS 247 NS++GP TFEQPK+T+EKLLEYGHMLV EQ+NVKRVQLAD Y+++AALG+AN+DAMKTGS Sbjct: 371 NSKEGPPTFEQPKITIEKLLEYGHMLVAEQENVKRVQLADKYLNEAALGEANEDAMKTGS 430 Query: 246 FY 241 F+ Sbjct: 431 FF 432
>RCA2_TOBAC (Q40565) Ribulose bisphosphate carboxylase/oxygenase activase 2,| chloroplast precursor (RuBisCO activase 2) (RA 2) Length = 439 Score = 204 bits (518), Expect = 2e-52 Identities = 98/121 (80%), Positives = 111/121 (91%) Frame = -1 Query: 606 VCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLV 427 VCKGIF+TDNV +E+V+KIVDTFPGQSIDFFGALRARVYDDEVRKWV TGIE IG +L+ Sbjct: 319 VCKGIFRTDNVPEEAVIKIVDTFPGQSIDFFGALRARVYDDEVRKWVSGTGIEAIGDKLL 378 Query: 426 NSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGS 247 NS DGP TFEQPKMTVEKLLEYG+MLVQEQ+NVKRVQLA+TY+ +AALGDAN DA+ TG+ Sbjct: 379 NSFDGPPTFEQPKMTVEKLLEYGNMLVQEQENVKRVQLAETYLKEAALGDANADAINTGN 438 Query: 246 F 244 F Sbjct: 439 F 439
>RCA_LYCPN (O49074) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 459 Score = 202 bits (514), Expect = 6e-52 Identities = 97/119 (81%), Positives = 111/119 (93%) Frame = -1 Query: 606 VCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLV 427 VCKGIF+TDNV +E+VVKIVD+FPGQSIDFFGALRARVYDDEVRKWV TGIE IG++L+ Sbjct: 314 VCKGIFRTDNVPEEAVVKIVDSFPGQSIDFFGALRARVYDDEVRKWVSGTGIELIGEKLL 373 Query: 426 NSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTG 250 NSRDGP TFEQPKMT+EKLLEYG+MLVQEQ+NVKRVQLA+TY+ +AALGDAN DA+ TG Sbjct: 374 NSRDGPPTFEQPKMTLEKLLEYGNMLVQEQENVKRVQLAETYLKEAALGDANADAINTG 432
>RCA2_LARTR (Q7X999) Ribulose bisphosphate carboxylase/oxygenase activase 2,| chloroplast precursor (RuBisCO activase 2) (RA 2) (RubisCO activase beta form) Length = 435 Score = 202 bits (513), Expect = 8e-52 Identities = 93/121 (76%), Positives = 111/121 (91%) Frame = -1 Query: 606 VCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLV 427 VCKGIF+TDNV +E +VK+VD FPGQSIDFFGALRARVYDDEVRKWV G++ IGK+LV Sbjct: 315 VCKGIFRTDNVPEEDIVKVVDQFPGQSIDFFGALRARVYDDEVRKWVSEVGVDTIGKKLV 374 Query: 426 NSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGS 247 NS++GP TFEQPKMT++KLL+YG+MLV+EQ+NVKRVQLAD YMS+AALGDANQDA+K G+ Sbjct: 375 NSKEGPPTFEQPKMTIDKLLQYGNMLVEEQENVKRVQLADKYMSEAALGDANQDAIKRGT 434 Query: 246 F 244 F Sbjct: 435 F 435
>RCA1_TOBAC (Q40460) Ribulose bisphosphate carboxylase/oxygenase activase 1,| chloroplast precursor (RuBisCO activase 1) (RA 1) Length = 442 Score = 198 bits (503), Expect = 1e-50 Identities = 96/122 (78%), Positives = 106/122 (86%) Frame = -1 Query: 606 VCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLV 427 VC GIF+TDNV E VVKIVD FPGQSIDFFGALRARVYDDEVRKWV TGIE IG +L+ Sbjct: 319 VCTGIFRTDNVPAEDVVKIVDNFPGQSIDFFGALRARVYDDEVRKWVSGTGIEKIGDKLL 378 Query: 426 NSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGS 247 NS DGP TFEQPKMT+EKLLEYG+MLVQEQ+NVKRVQLAD Y+ +AALGDAN DA+ GS Sbjct: 379 NSFDGPPTFEQPKMTIEKLLEYGNMLVQEQENVKRVQLADKYLKEAALGDANADAINNGS 438 Query: 246 FY 241 F+ Sbjct: 439 FF 440
>RCA_PHAAU (O98997) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 439 Score = 192 bits (488), Expect = 6e-49 Identities = 86/122 (70%), Positives = 111/122 (90%) Frame = -1 Query: 606 VCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLV 427 VCKGIF+TD V +E + K+VDTFPGQSIDFFGALRARVYDDEVRKW+ G++ GK+LV Sbjct: 317 VCKGIFRTDGVPEEDITKLVDTFPGQSIDFFGALRARVYDDEVRKWISGVGVDATGKKLV 376 Query: 426 NSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGS 247 NS++GP TF+QPKM+++KLL+YG+MLVQEQ+NVKRVQLAD Y+++AALG+AN+DA+K+GS Sbjct: 377 NSKEGPPTFDQPKMSLDKLLQYGNMLVQEQENVKRVQLADKYLNEAALGNANEDAIKSGS 436 Query: 246 FY 241 F+ Sbjct: 437 FF 438
>RCA_PHAVU (O64981) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 441 Score = 185 bits (469), Expect = 1e-46 Identities = 83/122 (68%), Positives = 109/122 (89%) Frame = -1 Query: 606 VCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLV 427 VCKGIF+TD V ++ +V++VD PGQSIDFFGALRARVYDDEVRKW+ G++++GK+LV Sbjct: 319 VCKGIFRTDGVPEKDIVELVDKHPGQSIDFFGALRARVYDDEVRKWISGVGVDSVGKKLV 378 Query: 426 NSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGS 247 NS++GP TF+QPKMT++KLL Y MLVQEQ+NVKRVQLAD Y+++AALG+AN+DA+K+GS Sbjct: 379 NSKEGPPTFDQPKMTLDKLLLYASMLVQEQENVKRVQLADQYLNEAALGNANEDAIKSGS 438 Query: 246 FY 241 F+ Sbjct: 439 FF 440
>RCA_CUCSA (Q01587) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 413 Score = 154 bits (388), Expect = 2e-37 Identities = 71/98 (72%), Positives = 84/98 (85%) Frame = -1 Query: 606 VCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLV 427 +C GIF+TD V E +VK+VDTFPGQSIDFFGALRARVYDDEVRKW G+E IG+ LV Sbjct: 312 ICTGIFRTDGVPFEDIVKLVDTFPGQSIDFFGALRARVYDDEVRKWAVGVGVERIGRNLV 371 Query: 426 NSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQL 313 NS++ P TF+QPKMT+EKLLEYG+MLV EQ+NVKRV+L Sbjct: 372 NSKESPPTFDQPKMTIEKLLEYGNMLVMEQENVKRVKL 409
>RCA_CHLRE (P23489) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 408 Score = 129 bits (325), Expect = 5e-30 Identities = 65/108 (60%), Positives = 79/108 (73%) Frame = -1 Query: 606 VCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLV 427 VC GIFQ DNV V +VDTFPGQSIDFFGALRARVYDD VR+W+ TG++ IG++LV Sbjct: 288 VCMGIFQEDNVQRREVENLVDTFPGQSIDFFGALRARVYDDMVRQWITDTGVDKIGQQLV 347 Query: 426 NSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAAL 283 N+R V + M + L++YG LV EQ+NVKRVQLAD Y+S A L Sbjct: 348 NARQ-KVAMPKVSMDLNVLIKYGKSLVDEQENVKRVQLADAYLSGAEL 394
>RCA_ANASC (Q06721) Ribulose bisphosphate carboxylase/oxygenase activase| (RuBisCO activase) (RA) Length = 415 Score = 100 bits (250), Expect = 3e-21 Identities = 45/99 (45%), Positives = 66/99 (66%) Frame = -1 Query: 597 GIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSR 418 GIF D +S V K+VD+FP QSIDFF ALR+R+YD+++R ++ G EN+ R+VNS Sbjct: 191 GIFAEDGLSQRDVEKLVDSFPNQSIDFFSALRSRIYDEQIRDFIHQVGYENVSLRVVNSL 250 Query: 417 DGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTY 301 +GP F++P T+ L+E + +V EQ ++ QL D Y Sbjct: 251 EGPPAFKKPDFTLSHLIESANFMVAEQKRIETSQLVDEY 289
>RCA_ANASP (P58555) Ribulose bisphosphate carboxylase/oxygenase activase| (RuBisCO activase) (RA) Length = 414 Score = 93.2 bits (230), Expect = 5e-19 Identities = 43/99 (43%), Positives = 64/99 (64%) Frame = -1 Query: 597 GIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSR 418 GIF D +S + ++VDTFP QSIDFF ALR+R+YD ++R ++ G E I R+VNS Sbjct: 191 GIFAEDGLSQREIEQLVDTFPKQSIDFFSALRSRIYDIQIRDFIHKVGFERISLRVVNSL 250 Query: 417 DGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTY 301 + P F++P ++ L+E G++++ EQ V QL D Y Sbjct: 251 EAPPEFKKPDFSLAHLIESGNLVLGEQQRVDNSQLVDEY 289
>RCA_POPEU (P84562) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast (RuBisCO activase) (RA) (Fragments) Length = 32 Score = 47.0 bits (110), Expect = 4e-05 Identities = 27/60 (45%), Positives = 30/60 (50%) Frame = -1 Query: 552 IVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEK 373 +VDTFPGQSIDFFGAL R+GP TFEQP MT+EK Sbjct: 1 LVDTFPGQSIDFFGAL----------------------------REGPPTFEQPAMTIEK 32
>ZDH23_HUMAN (Q8IYP9) Probable palmitoyltransferase ZDHHC23 (EC 2.3.1.-) (Zinc| finger DHHC domain-containing protein 23) (DHHC-23) Length = 409 Score = 30.8 bits (68), Expect = 3.2 Identities = 18/64 (28%), Positives = 25/64 (39%), Gaps = 1/64 (1%) Frame = +2 Query: 200 PSGTGKVPCCAPLP*KEPVFIASWLASPRAAWLM*VSASCT-RLTLSCSWTSMCPYSSSF 376 P G+ K+P +P KE L P AW + C R+ C W + C S+ Sbjct: 242 PKGSSKMPAGSPTKAKEDWCAKCQLVRPARAWRCRICGICVRRMDHHCVWINSCVGESNH 301 Query: 377 STVI 388 I Sbjct: 302 QAFI 305
>YNEI_ECOLI (P76149) Aldehyde dehydrogenase-like protein yneI (EC 1.2.1.-)| Length = 462 Score = 30.4 bits (67), Expect = 4.2 Identities = 14/42 (33%), Positives = 23/42 (54%) Frame = +1 Query: 469 PLAHLIVVHPSTQSTEKVNGLSWEGVDDLDDRLVTDIVGLED 594 P H I ++P+T E+++ L W G DD+++ L G D Sbjct: 5 PATHAISINPATG--EQLSVLPWAGADDIENALQLAAAGFRD 44
>LEPA_HELPY (O25122) GTP-binding protein lepA| Length = 602 Score = 30.4 bits (67), Expect = 4.2 Identities = 20/79 (25%), Positives = 37/79 (46%) Frame = -1 Query: 555 KIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVE 376 KI+ T P S DF L+A +YD ++G+ LV DG + EQ + + Sbjct: 180 KIITTIPAPSGDFNAPLKALIYDSWFDNYLGALA-------LVRIMDGSINTEQEILVMG 232 Query: 375 KLLEYGHMLVQEQDNVKRV 319 ++G + + + +K++ Sbjct: 233 TGKKHGVLGLYYPNPLKKI 251
>GP116_HUMAN (Q8IZF2) Probable G-protein coupled receptor 116 precursor| Length = 1346 Score = 30.0 bits (66), Expect = 5.4 Identities = 14/35 (40%), Positives = 21/35 (60%) Frame = +2 Query: 305 VSASCTRLTLSCSWTSMCPYSSSFSTVIFGCSKVT 409 + +SC+R TL T CP SS +TVI+ C ++ Sbjct: 420 IDSSCSRYTLKADGTQ-CPSGSSGTTVIYTCEFIS 453
>S20AB_XENLA (Q6PB26) Sodium-dependent phosphate transporter 1-B (Solute carrier| family 20 member 1-B) Length = 685 Score = 29.6 bits (65), Expect = 7.1 Identities = 21/73 (28%), Positives = 39/73 (53%), Gaps = 2/73 (2%) Frame = +1 Query: 130 GVKAAAVVAPCRWVVVLGILVG--ATFRHGQSTLLCSFTVEGTSLHRILVSITQSCLAHV 303 G++ ++AP W++VLG ++ F G + + SF GT++ +V++ Q+C+ Sbjct: 15 GIQDVHIMAPYLWMLVLGFVIAFVLAFSVGANDVANSF---GTAVGSGVVTLRQACIL-- 69 Query: 304 GVSKLHTLDIVLL 342 S T+ VLL Sbjct: 70 -ASIFETVGSVLL 81
>LRC24_MOUSE (Q8BHA1) Leucine-rich repeat-containing protein 24 precursor| Length = 521 Score = 29.6 bits (65), Expect = 7.1 Identities = 16/37 (43%), Positives = 26/37 (70%), Gaps = 1/37 (2%) Frame = -1 Query: 471 WVGSTGIENIGKRLVNSRDGPVT-FEQPKMTVEKLLE 364 W+GS I+ G+RL++SRD +T E P++ ++ LLE Sbjct: 222 WLGSW-IKEGGRRLLSSRDKKITCAEPPRLALQSLLE 257
>CCMF_ARATH (P93286) Putative cytochrome c biogenesis ccmF-like mitochondrial| protein Length = 442 Score = 29.6 bits (65), Expect = 7.1 Identities = 19/36 (52%), Positives = 21/36 (58%) Frame = -3 Query: 253 WFLLR*RSTARYFARAGRLHRPKCQELRPNGKERRR 146 +FL R RS R AR R K Q LRPNG E+RR Sbjct: 139 FFLARDRSAKRERAR-----RRKGQTLRPNGNEQRR 169
>TAL_STRP8 (P66961) Probable transaldolase (EC 2.2.1.2)| Length = 214 Score = 29.3 bits (64), Expect = 9.3 Identities = 20/86 (23%), Positives = 39/86 (45%) Frame = -1 Query: 450 ENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDAN 271 E + K + + DGP++ E +T + ++E + + DNV V++ T A + Sbjct: 40 ETVIKEICDIVDGPISAEVTGLTADAMVEEARSIAKWHDNVV-VKIPMTTEGLKATNILS 98 Query: 270 QDAMKTGSFYGKGAQQGTLPVPEGCT 193 ++ +KT QG + + G T Sbjct: 99 KEGIKTNVTLIFTVSQGLMAMKAGAT 124
>TAL_STRP6 (Q5XAK4) Probable transaldolase (EC 2.2.1.2)| Length = 214 Score = 29.3 bits (64), Expect = 9.3 Identities = 20/86 (23%), Positives = 39/86 (45%) Frame = -1 Query: 450 ENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDAN 271 E + K + + DGP++ E +T + ++E + + DNV V++ T A + Sbjct: 40 ETVIKEICDIVDGPISAEVTGLTADAMVEEARSIAKWHDNVV-VKIPMTTEGLKATNILS 98 Query: 270 QDAMKTGSFYGKGAQQGTLPVPEGCT 193 ++ +KT QG + + G T Sbjct: 99 KEGIKTNVTLIFTVSQGLMAMKAGAT 124
>TAL_STRP3 (P66960) Probable transaldolase (EC 2.2.1.2)| Length = 214 Score = 29.3 bits (64), Expect = 9.3 Identities = 20/86 (23%), Positives = 39/86 (45%) Frame = -1 Query: 450 ENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDAN 271 E + K + + DGP++ E +T + ++E + + DNV V++ T A + Sbjct: 40 ETVIKEICDIVDGPISAEVTGLTADAMVEEARSIAKWHDNVV-VKIPMTTEGLKATNILS 98 Query: 270 QDAMKTGSFYGKGAQQGTLPVPEGCT 193 ++ +KT QG + + G T Sbjct: 99 KEGIKTNVTLIFTVSQGLMAMKAGAT 124
>TAL_STRP1 (P66959) Probable transaldolase (EC 2.2.1.2)| Length = 214 Score = 29.3 bits (64), Expect = 9.3 Identities = 20/86 (23%), Positives = 39/86 (45%) Frame = -1 Query: 450 ENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDAN 271 E + K + + DGP++ E +T + ++E + + DNV V++ T A + Sbjct: 40 ETVIKEICDIVDGPISAEVTGLTADAMVEEARSIAKWHDNVV-VKIPMTTEGLKATNILS 98 Query: 270 QDAMKTGSFYGKGAQQGTLPVPEGCT 193 ++ +KT QG + + G T Sbjct: 99 KEGIKTNVTLIFTVSQGLMAMKAGAT 124
>RL3_CLOPE (Q8XHS3) 50S ribosomal protein L3| Length = 209 Score = 29.3 bits (64), Expect = 9.3 Identities = 21/77 (27%), Positives = 33/77 (42%), Gaps = 1/77 (1%) Frame = -1 Query: 579 NVSDESVVKIVDTFP-GQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVT 403 NV DE +K VDTF G +D G + + + +++W S G + G + + Sbjct: 92 NVGDE--IK-VDTFEIGDKVDVSGVSKGKGFQGTIKRWNASRGPMSHGSKFHRAPGSMGA 148 Query: 402 FEQPKMTVEKLLEYGHM 352 P T + GHM Sbjct: 149 ASDPSRTFKNKRMPGHM 165
>DNLI_VARV (P33798) DNA ligase (EC 6.5.1.1) (Polydeoxyribonucleotide synthase| [ATP]) Length = 552 Score = 29.3 bits (64), Expect = 9.3 Identities = 16/57 (28%), Positives = 32/57 (56%), Gaps = 1/57 (1%) Frame = -1 Query: 348 VQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFYGKGAQQGTLPV-PEGCTDQNA 181 V E + +++ Y+++ ++ D+ D + G++YGKGA+ G + V GC D + Sbjct: 387 VYEPGKRRWLKIKRDYLNEGSMADS-ADLVVLGAYYGKGAKGGIMAVFLMGCYDDES 442
>DNLI_VACCV (P16272) DNA ligase (EC 6.5.1.1) (Polydeoxyribonucleotide synthase| [ATP]) Length = 552 Score = 29.3 bits (64), Expect = 9.3 Identities = 16/57 (28%), Positives = 32/57 (56%), Gaps = 1/57 (1%) Frame = -1 Query: 348 VQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFYGKGAQQGTLPV-PEGCTDQNA 181 V E + +++ Y+++ ++ D+ D + G++YGKGA+ G + V GC D + Sbjct: 387 VYEPGKRRWLKIKRDYLNEGSMADS-ADLVVLGAYYGKGAKGGIMAVFLMGCYDDES 442
>DNLI_VACCC (P20492) DNA ligase (EC 6.5.1.1) (Polydeoxyribonucleotide synthase| [ATP]) Length = 552 Score = 29.3 bits (64), Expect = 9.3 Identities = 16/57 (28%), Positives = 32/57 (56%), Gaps = 1/57 (1%) Frame = -1 Query: 348 VQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFYGKGAQQGTLPV-PEGCTDQNA 181 V E + +++ Y+++ ++ D+ D + G++YGKGA+ G + V GC D + Sbjct: 387 VYEPGKRRWLKIKRDYLNEGSMADS-ADLVVLGAYYGKGAKGGIMAVFLMGCYDDES 442
>DNLI_VACCA (O57250) DNA ligase (EC 6.5.1.1) (Polydeoxyribonucleotide synthase| [ATP]) Length = 552 Score = 29.3 bits (64), Expect = 9.3 Identities = 16/57 (28%), Positives = 32/57 (56%), Gaps = 1/57 (1%) Frame = -1 Query: 348 VQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFYGKGAQQGTLPV-PEGCTDQNA 181 V E + +++ Y+++ ++ D+ D + G++YGKGA+ G + V GC D + Sbjct: 387 VYEPGKRRWLKIKRDYLNEGSMADS-ADLVVLGAYYGKGAKGGIMAVFLMGCYDDES 442
>RPOA_ANAMM (Q5PA81) DNA-directed RNA polymerase alpha chain (EC 2.7.7.6) (RNAP| alpha subunit) (Transcriptase alpha chain) (RNA polymerase alpha subunit) Length = 366 Score = 29.3 bits (64), Expect = 9.3 Identities = 15/57 (26%), Positives = 32/57 (56%) Frame = -1 Query: 567 ESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFE 397 + +V V+T S D A+ ARV D+++ ++GS +E ++ V+ +G + ++ Sbjct: 224 DRLVISVETDGSISPDEAVAVSARVLQDQLQSFIGSEEVEGESRKKVDKEEGALPYD 280
>LEPA_LEIXX (Q6AEB5) GTP-binding protein lepA| Length = 616 Score = 29.3 bits (64), Expect = 9.3 Identities = 26/66 (39%), Positives = 33/66 (50%), Gaps = 9/66 (13%) Frame = +1 Query: 433 PLANVLDSGRADP------LAHLIVVHPSTQSTEKVNGLSWEGVDDLDDRLVTDI---VG 585 P+ N +D ADP LA LI P +V+G + GVDDL DR+V +I VG Sbjct: 142 PVLNKIDLPAADPDKYAAELAGLIGGKPG--DVLRVSGKTGVGVDDLLDRVVQEIPAPVG 199 Query: 586 LEDTLA 603 D A Sbjct: 200 AADAPA 205 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 83,215,759 Number of Sequences: 219361 Number of extensions: 1644022 Number of successful extensions: 4887 Number of sequences better than 10.0: 37 Number of HSP's better than 10.0 without gapping: 4762 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4884 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5367617986 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)