Clone Name | rbah61n17 |
---|---|
Clone Library Name | barley_pub |
>ref|XM_450041.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1666 Score = 329 bits (166), Expect = 7e-87 Identities = 259/290 (89%) Strand = Plus / Minus Query: 355 tgaattctatggttcctgaatagacgttcccatttacggaagaggtggttcggttaggtg 414 |||||||||| ||||||||||| ||||| |||||||| ||||||| || |||||||| | Sbjct: 1286 tgaattctatagttcctgaatatacgtttccatttacagaagaggaagtccggttagggg 1227 Query: 415 cgccagtgttcttgcatgcgcccgtgggtgccccagcctggcaagcagcaatggagttgc 474 | || |||| |||||||||||||| |||||||||||||||||||||||||||| ||||| Sbjct: 1226 ctccggtgtccttgcatgcgcccgctggtgccccagcctggcaagcagcaatggtgttgc 1167 Query: 475 aaccacatagcgtaaggccgttgattctgtcttgaacatcaaaaacaccaccaccatcgc 534 | |||||||| || | ||| ||||| ||||||||||||||||||||||| |||||||||| Sbjct: 1166 agccacatagtgtcacgccattgatcctgtcttgaacatcaaaaacacccccaccatcgc 1107 Query: 535 ttcgcatgtaaaaattaacagctatgtagttcgggattctatttccagctgcagcatagc 594 |||||||||| |||| ||||||||| |||| |||||||||||||||||||||| ||||| Sbjct: 1106 ttcgcatgtagtaattcacagctatgaagttagggattctatttccagctgcagtatagc 1047 Query: 595 atgtttggaccatctgcggtagtccaacagaattctctttgcatgcttca 644 | |||||||||||||| ||||||||||||||||||||||| || |||||| Sbjct: 1046 aagtttggaccatctgtggtagtccaacagaattctctttacacgcttca 997
>ref|XM_506634.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1310_F05.17 mRNA Length = 1719 Score = 329 bits (166), Expect = 7e-87 Identities = 259/290 (89%) Strand = Plus / Minus Query: 355 tgaattctatggttcctgaatagacgttcccatttacggaagaggtggttcggttaggtg 414 |||||||||| ||||||||||| ||||| |||||||| ||||||| || |||||||| | Sbjct: 1332 tgaattctatagttcctgaatatacgtttccatttacagaagaggaagtccggttagggg 1273 Query: 415 cgccagtgttcttgcatgcgcccgtgggtgccccagcctggcaagcagcaatggagttgc 474 | || |||| |||||||||||||| |||||||||||||||||||||||||||| ||||| Sbjct: 1272 ctccggtgtccttgcatgcgcccgctggtgccccagcctggcaagcagcaatggtgttgc 1213 Query: 475 aaccacatagcgtaaggccgttgattctgtcttgaacatcaaaaacaccaccaccatcgc 534 | |||||||| || | ||| ||||| ||||||||||||||||||||||| |||||||||| Sbjct: 1212 agccacatagtgtcacgccattgatcctgtcttgaacatcaaaaacacccccaccatcgc 1153 Query: 535 ttcgcatgtaaaaattaacagctatgtagttcgggattctatttccagctgcagcatagc 594 |||||||||| |||| ||||||||| |||| |||||||||||||||||||||| ||||| Sbjct: 1152 ttcgcatgtagtaattcacagctatgaagttagggattctatttccagctgcagtatagc 1093 Query: 595 atgtttggaccatctgcggtagtccaacagaattctctttgcatgcttca 644 | |||||||||||||| ||||||||||||||||||||||| || |||||| Sbjct: 1092 aagtttggaccatctgtggtagtccaacagaattctctttacacgcttca 1043
>dbj|AK099343.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033028L08, full insert sequence Length = 1666 Score = 329 bits (166), Expect = 7e-87 Identities = 259/290 (89%) Strand = Plus / Minus Query: 355 tgaattctatggttcctgaatagacgttcccatttacggaagaggtggttcggttaggtg 414 |||||||||| ||||||||||| ||||| |||||||| ||||||| || |||||||| | Sbjct: 1286 tgaattctatagttcctgaatatacgtttccatttacagaagaggaagtccggttagggg 1227 Query: 415 cgccagtgttcttgcatgcgcccgtgggtgccccagcctggcaagcagcaatggagttgc 474 | || |||| |||||||||||||| |||||||||||||||||||||||||||| ||||| Sbjct: 1226 ctccggtgtccttgcatgcgcccgctggtgccccagcctggcaagcagcaatggtgttgc 1167 Query: 475 aaccacatagcgtaaggccgttgattctgtcttgaacatcaaaaacaccaccaccatcgc 534 | |||||||| || | ||| ||||| ||||||||||||||||||||||| |||||||||| Sbjct: 1166 agccacatagtgtcacgccattgatcctgtcttgaacatcaaaaacacccccaccatcgc 1107 Query: 535 ttcgcatgtaaaaattaacagctatgtagttcgggattctatttccagctgcagcatagc 594 |||||||||| |||| ||||||||| |||| |||||||||||||||||||||| ||||| Sbjct: 1106 ttcgcatgtagtaattcacagctatgaagttagggattctatttccagctgcagtatagc 1047 Query: 595 atgtttggaccatctgcggtagtccaacagaattctctttgcatgcttca 644 | |||||||||||||| ||||||||||||||||||||||| || |||||| Sbjct: 1046 aagtttggaccatctgtggtagtccaacagaattctctttacacgcttca 997
>dbj|AK060378.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-009-D07, full insert sequence Length = 1719 Score = 329 bits (166), Expect = 7e-87 Identities = 259/290 (89%) Strand = Plus / Minus Query: 355 tgaattctatggttcctgaatagacgttcccatttacggaagaggtggttcggttaggtg 414 |||||||||| ||||||||||| ||||| |||||||| ||||||| || |||||||| | Sbjct: 1332 tgaattctatagttcctgaatatacgtttccatttacagaagaggaagtccggttagggg 1273 Query: 415 cgccagtgttcttgcatgcgcccgtgggtgccccagcctggcaagcagcaatggagttgc 474 | || |||| |||||||||||||| |||||||||||||||||||||||||||| ||||| Sbjct: 1272 ctccggtgtccttgcatgcgcccgctggtgccccagcctggcaagcagcaatggtgttgc 1213 Query: 475 aaccacatagcgtaaggccgttgattctgtcttgaacatcaaaaacaccaccaccatcgc 534 | |||||||| || | ||| ||||| ||||||||||||||||||||||| |||||||||| Sbjct: 1212 agccacatagtgtcacgccattgatcctgtcttgaacatcaaaaacacccccaccatcgc 1153 Query: 535 ttcgcatgtaaaaattaacagctatgtagttcgggattctatttccagctgcagcatagc 594 |||||||||| |||| ||||||||| |||| |||||||||||||||||||||| ||||| Sbjct: 1152 ttcgcatgtagtaattcacagctatgaagttagggattctatttccagctgcagtatagc 1093 Query: 595 atgtttggaccatctgcggtagtccaacagaattctctttgcatgcttca 644 | |||||||||||||| ||||||||||||||||||||||| || |||||| Sbjct: 1092 aagtttggaccatctgtggtagtccaacagaattctctttacacgcttca 1043
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 131 bits (66), Expect = 3e-27 Identities = 90/98 (91%) Strand = Plus / Plus Query: 547 aattaacagctatgtagttcgggattctatttccagctgcagcatagcatgtttggacca 606 |||| ||||||||| |||| |||||||||||||||||||||| |||||| |||||||||| Sbjct: 1174130 aattcacagctatgaagttagggattctatttccagctgcagtatagcaagtttggacca 1174189 Query: 607 tctgcggtagtccaacagaattctctttgcatgcttca 644 |||| ||||||||||||||||||||||| || |||||| Sbjct: 1174190 tctgtggtagtccaacagaattctctttacacgcttca 1174227 Score = 113 bits (57), Expect = 7e-22 Identities = 81/89 (91%) Strand = Plus / Plus Query: 451 cctggcaagcagcaatggagttgcaaccacatagcgtaaggccgttgattctgtcttgaa 510 |||||||||||||||||| |||||| |||||||| || | ||| ||||| |||||||||| Sbjct: 1173948 cctggcaagcagcaatggtgttgcagccacatagtgtcacgccattgatcctgtcttgaa 1174007 Query: 511 catcaaaaacaccaccaccatcgcttcgc 539 ||||||||||||| ||||||||||||||| Sbjct: 1174008 catcaaaaacacccccaccatcgcttcgc 1174036 Score = 95.6 bits (48), Expect = 2e-16 Identities = 87/100 (87%) Strand = Plus / Plus Query: 355 tgaattctatggttcctgaatagacgttcccatttacggaagaggtggttcggttaggtg 414 |||||||||| ||||||||||| ||||| |||||||| ||||||| || |||||||| | Sbjct: 1173694 tgaattctatagttcctgaatatacgtttccatttacagaagaggaagtccggttagggg 1173753 Query: 415 cgccagtgttcttgcatgcgcccgtgggtgccccagcctg 454 | || |||| |||||||||||||| |||||||||||||| Sbjct: 1173754 ctccggtgtccttgcatgcgcccgctggtgccccagcctg 1173793
>dbj|AP005789.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0563F09 Length = 174905 Score = 131 bits (66), Expect = 3e-27 Identities = 90/98 (91%) Strand = Plus / Plus Query: 547 aattaacagctatgtagttcgggattctatttccagctgcagcatagcatgtttggacca 606 |||| ||||||||| |||| |||||||||||||||||||||| |||||| |||||||||| Sbjct: 5004 aattcacagctatgaagttagggattctatttccagctgcagtatagcaagtttggacca 5063 Query: 607 tctgcggtagtccaacagaattctctttgcatgcttca 644 |||| ||||||||||||||||||||||| || |||||| Sbjct: 5064 tctgtggtagtccaacagaattctctttacacgcttca 5101 Score = 113 bits (57), Expect = 7e-22 Identities = 81/89 (91%) Strand = Plus / Plus Query: 451 cctggcaagcagcaatggagttgcaaccacatagcgtaaggccgttgattctgtcttgaa 510 |||||||||||||||||| |||||| |||||||| || | ||| ||||| |||||||||| Sbjct: 4822 cctggcaagcagcaatggtgttgcagccacatagtgtcacgccattgatcctgtcttgaa 4881 Query: 511 catcaaaaacaccaccaccatcgcttcgc 539 ||||||||||||| ||||||||||||||| Sbjct: 4882 catcaaaaacacccccaccatcgcttcgc 4910 Score = 95.6 bits (48), Expect = 2e-16 Identities = 87/100 (87%) Strand = Plus / Plus Query: 355 tgaattctatggttcctgaatagacgttcccatttacggaagaggtggttcggttaggtg 414 |||||||||| ||||||||||| ||||| |||||||| ||||||| || |||||||| | Sbjct: 4568 tgaattctatagttcctgaatatacgtttccatttacagaagaggaagtccggttagggg 4627 Query: 415 cgccagtgttcttgcatgcgcccgtgggtgccccagcctg 454 | || |||| |||||||||||||| |||||||||||||| Sbjct: 4628 ctccggtgtccttgcatgcgcccgctggtgccccagcctg 4667
>dbj|AP005569.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1310_F05 Length = 107916 Score = 131 bits (66), Expect = 3e-27 Identities = 90/98 (91%) Strand = Plus / Plus Query: 547 aattaacagctatgtagttcgggattctatttccagctgcagcatagcatgtttggacca 606 |||| ||||||||| |||| |||||||||||||||||||||| |||||| |||||||||| Sbjct: 62724 aattcacagctatgaagttagggattctatttccagctgcagtatagcaagtttggacca 62783 Query: 607 tctgcggtagtccaacagaattctctttgcatgcttca 644 |||| ||||||||||||||||||||||| || |||||| Sbjct: 62784 tctgtggtagtccaacagaattctctttacacgcttca 62821 Score = 113 bits (57), Expect = 7e-22 Identities = 81/89 (91%) Strand = Plus / Plus Query: 451 cctggcaagcagcaatggagttgcaaccacatagcgtaaggccgttgattctgtcttgaa 510 |||||||||||||||||| |||||| |||||||| || | ||| ||||| |||||||||| Sbjct: 62542 cctggcaagcagcaatggtgttgcagccacatagtgtcacgccattgatcctgtcttgaa 62601 Query: 511 catcaaaaacaccaccaccatcgcttcgc 539 ||||||||||||| ||||||||||||||| Sbjct: 62602 catcaaaaacacccccaccatcgcttcgc 62630 Score = 95.6 bits (48), Expect = 2e-16 Identities = 87/100 (87%) Strand = Plus / Plus Query: 355 tgaattctatggttcctgaatagacgttcccatttacggaagaggtggttcggttaggtg 414 |||||||||| ||||||||||| ||||| |||||||| ||||||| || |||||||| | Sbjct: 62288 tgaattctatagttcctgaatatacgtttccatttacagaagaggaagtccggttagggg 62347 Query: 415 cgccagtgttcttgcatgcgcccgtgggtgccccagcctg 454 | || |||| |||||||||||||| |||||||||||||| Sbjct: 62348 ctccggtgtccttgcatgcgcccgctggtgccccagcctg 62387
>gb|BT018185.1| Zea mays clone EL01N0558E02.c mRNA sequence Length = 1219 Score = 48.1 bits (24), Expect = 0.036 Identities = 39/44 (88%) Strand = Plus / Minus Query: 525 ccaccatcgcttcgcatgtaaaaattaacagctatgtagttcgg 568 ||||| || |||| ||||||||||| |||||| ||||||||||| Sbjct: 873 ccaccgtcacttctcatgtaaaaatcaacagcgatgtagttcgg 830
>gb|AF167451.1| Littorina subrotundata clone Lsub62 microsatellite sequence Length = 362 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Plus Query: 509 aacatcaaaaacaccaccacca 530 |||||||||||||||||||||| Sbjct: 273 aacatcaaaaacaccaccacca 294
>gb|AC141885.3| Mus musculus BAC clone RP24-104I20 from chromosome 16, complete sequence Length = 167248 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Minus Query: 71 tgcacactatttgttctatcca 92 |||||||||||||||||||||| Sbjct: 101428 tgcacactatttgttctatcca 101407
>ref|XM_981719.1| PREDICTED: Mus musculus synaptojanin 1 (Synj1), mRNA Length = 7284 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Minus Query: 71 tgcacactatttgttctatcca 92 |||||||||||||||||||||| Sbjct: 1613 tgcacactatttgttctatcca 1592
>ref|XM_358889.5| PREDICTED: Mus musculus synaptojanin 1 (Synj1), mRNA Length = 7284 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Minus Query: 71 tgcacactatttgttctatcca 92 |||||||||||||||||||||| Sbjct: 1613 tgcacactatttgttctatcca 1592
>ref|XM_973263.1| PREDICTED: Mus musculus synaptojanin 1 (Synj1), mRNA Length = 7285 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Minus Query: 71 tgcacactatttgttctatcca 92 |||||||||||||||||||||| Sbjct: 1614 tgcacactatttgttctatcca 1593
>gb|AC093502.2| Drosophila melanogaster 3L BAC RP98-48C4 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 166249 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Plus Query: 322 tggaagtactgctggcccttga 343 |||||||||||||||||||||| Sbjct: 137917 tggaagtactgctggcccttga 137938
>gb|AC010031.8| Drosophila melanogaster 3L BAC RP98-2M20 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 173509 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Plus Query: 322 tggaagtactgctggcccttga 343 |||||||||||||||||||||| Sbjct: 69926 tggaagtactgctggcccttga 69947
>gb|AY118377.1| Drosophila melanogaster RE24170 full insert cDNA Length = 4564 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Minus Query: 322 tggaagtactgctggcccttga 343 |||||||||||||||||||||| Sbjct: 463 tggaagtactgctggcccttga 442
>ref|NM_079337.2| Drosophila melanogaster Glued CG9206-RA (Gl), mRNA Length = 4548 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Minus Query: 322 tggaagtactgctggcccttga 343 |||||||||||||||||||||| Sbjct: 463 tggaagtactgctggcccttga 442
>dbj|AK080946.1| Mus musculus 4 days neonate male adipose cDNA, RIKEN full-length enriched library, clone:B430216F19 product:SYNAPTOJANIN 1 (EC 3.1.3.56) (SYNAPTIC INOSITOL-1,4,5-TRISPHOSPHATE 5- PHOSPHATASE 1) homolog [Rattus norvegicus], full insert sequence Length = 2745 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Minus Query: 71 tgcacactatttgttctatcca 92 |||||||||||||||||||||| Sbjct: 1293 tgcacactatttgttctatcca 1272
>dbj|AB093272.1| Mus musculus mRNA for mKIAA0910 protein Length = 6898 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Minus Query: 71 tgcacactatttgttctatcca 92 |||||||||||||||||||||| Sbjct: 1212 tgcacactatttgttctatcca 1191
>emb|CR381534.20| Zebrafish DNA sequence from clone DKEY-246J7 in linkage group 20, complete sequence Length = 151308 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Minus Query: 110 ttatctatttctctgaatatag 131 |||||||||||||||||||||| Sbjct: 43262 ttatctatttctctgaatatag 43241
>gb|AE003536.4| Drosophila melanogaster chromosome 3L, section 49 of 83 of the complete sequence Length = 350428 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Minus Query: 322 tggaagtactgctggcccttga 343 |||||||||||||||||||||| Sbjct: 190194 tggaagtactgctggcccttga 190173
>gb|J02932.1|DROGLUEDA Fruit fly (D.melanogaster) Glued mRNA, complete cds Length = 4959 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Minus Query: 322 tggaagtactgctggcccttga 343 |||||||||||||||||||||| Sbjct: 891 tggaagtactgctggcccttga 870
>ref|XM_519153.1| PREDICTED: Pan troglodytes nuclear pore membrane protein 121 (LOC463477), mRNA Length = 2100 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 205 gaagaagaagaaaaggacagt 225 ||||||||||||||||||||| Sbjct: 585 gaagaagaagaaaaggacagt 605
>gb|AC124323.10| Mus musculus chromosome 19, clone RP24-444B6, complete sequence Length = 150803 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 134 tagaaagctagcaagctgctg 154 ||||||||||||||||||||| Sbjct: 3697 tagaaagctagcaagctgctg 3717
>gb|BC017101.1| Homo sapiens POM (POM121 homolog, rat) and ZP3 fusion, transcript variant 1, mRNA (cDNA clone MGC:15195 IMAGE:3530152), complete cds Length = 1271 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 205 gaagaagaagaaaaggacagt 225 ||||||||||||||||||||| Sbjct: 554 gaagaagaagaaaaggacagt 574
>ref|NM_152992.1| Homo sapiens POM (POM121 homolog, rat) and ZP3 fusion (POMZP3), transcript variant 2, mRNA Length = 1281 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 205 gaagaagaagaaaaggacagt 225 ||||||||||||||||||||| Sbjct: 849 gaagaagaagaaaaggacagt 869
>ref|NM_012230.2| Homo sapiens POM (POM121 homolog, rat) and ZP3 fusion (POMZP3), transcript variant 1, mRNA Length = 1493 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 205 gaagaagaagaaaaggacagt 225 ||||||||||||||||||||| Sbjct: 849 gaagaagaagaaaaggacagt 869
>gb|AC126940.4| Mus musculus BAC clone RP23-77E4 from chromosome 19, complete sequence Length = 256476 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 226 tcacaaacccacaaagacatg 246 ||||||||||||||||||||| Sbjct: 73033 tcacaaacccacaaagacatg 73053
>gb|AC127434.1| Mus musculus BAC clone RP23-189J11 from 19, complete sequence Length = 199422 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 106 ctcattatctatttctctgaatata 130 |||||||||||||||||||| |||| Sbjct: 89426 ctcattatctatttctctgattata 89450
>gb|BC000487.2| Homo sapiens POM (POM121 homolog, rat) and ZP3 fusion, mRNA (cDNA clone MGC:8359 IMAGE:2819839), complete cds Length = 1279 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 205 gaagaagaagaaaaggacagt 225 ||||||||||||||||||||| Sbjct: 847 gaagaagaagaaaaggacagt 867
>gb|AC142303.1| Pan troglodytes BAC clone RP43-129L21 from 7, complete sequence Length = 199670 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 205 gaagaagaagaaaaggacagt 225 ||||||||||||||||||||| Sbjct: 37181 gaagaagaagaaaaggacagt 37161
>emb|Z84719.1|HS340G1 Human DNA sequence from clone RP3-340G1 on chromosome 6q16, complete sequence Length = 124010 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 215 aaaaggacagttcacaaaccc 235 ||||||||||||||||||||| Sbjct: 301 aaaaggacagttcacaaaccc 281
>emb|AL590027.10| Human DNA sequence from clone RP11-338L17 on chromosome 13, complete sequence Length = 68556 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 507 tgaacatcaaaaacaccacca 527 ||||||||||||||||||||| Sbjct: 54805 tgaacatcaaaaacaccacca 54785
>emb|AL137068.10| Human DNA sequence from clone RP11-165P4 on chromosome 9q34.11-34.13 Contains a novel gene, the CEP1 gene for centrosomal protein 1 (FAN, CEP110), the RAB14 gene for RAB14, member RAS oncogene family (DKFZp762K0911), the 5' end of a novel gene and a CpG island, complete sequence Length = 147029 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 201 tatggaagaagaagaaaagga 221 ||||||||||||||||||||| Sbjct: 133721 tatggaagaagaagaaaagga 133701
>gb|AC092406.3| Papio anubis clone RP41-326L21, complete sequence Length = 192030 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 205 gaagaagaagaaaaggacagt 225 ||||||||||||||||||||| Sbjct: 35770 gaagaagaagaaaaggacagt 35750
>emb|CR616549.1| full-length cDNA clone CS0DB001YO01 of Neuroblastoma Cot 10-normalized of Homo sapiens (human) Length = 1115 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 205 gaagaagaagaaaaggacagt 225 ||||||||||||||||||||| Sbjct: 516 gaagaagaagaaaaggacagt 536
>emb|CR603033.1| full-length cDNA clone CS0DM011YN19 of Fetal liver of Homo sapiens (human) Length = 1587 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 205 gaagaagaagaaaaggacagt 225 ||||||||||||||||||||| Sbjct: 864 gaagaagaagaaaaggacagt 884
>gb|AC006014.3| Homo sapiens PAC clone RP5-953A4 from 7q11.23-q21.1, complete sequence Length = 127761 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 205 gaagaagaagaaaaggacagt 225 ||||||||||||||||||||| Sbjct: 123478 gaagaagaagaaaaggacagt 123458
>gb|AC004980.5| Homo sapiens PAC clone RP5-1158B1 from 7q11.2-q22, complete sequence Length = 213740 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 205 gaagaagaagaaaaggacagt 225 ||||||||||||||||||||| Sbjct: 111631 gaagaagaagaaaaggacagt 111611
>dbj|AK143998.1| Mus musculus adult male kidney cDNA, RIKEN full-length enriched library, clone:F530014L18 product:proprotein convertase subtilisin/kexin type 5, full insert sequence Length = 4063 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 226 tcacaaacccacaaagacatg 246 ||||||||||||||||||||| Sbjct: 3446 tcacaaacccacaaagacatg 3466
>ref|XM_935945.1| PREDICTED: Homo sapiens nuclear envelope pore membrane LOC441253, transcript variant 4 (LOC441253), mRNA Length = 1429 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 205 gaagaagaagaaaaggacagt 225 ||||||||||||||||||||| Sbjct: 1148 gaagaagaagaaaaggacagt 1168
>ref|XM_379877.3| PREDICTED: Homo sapiens nuclear envelope pore membrane LOC441253, transcript variant 2 (LOC441253), mRNA Length = 1177 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 205 gaagaagaagaaaaggacagt 225 ||||||||||||||||||||| Sbjct: 896 gaagaagaagaaaaggacagt 916
>ref|XM_933746.1| PREDICTED: Homo sapiens nuclear envelope pore membrane LOC441253, transcript variant 3 (LOC441253), mRNA Length = 1429 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 205 gaagaagaagaaaaggacagt 225 ||||||||||||||||||||| Sbjct: 1148 gaagaagaagaaaaggacagt 1168
>ref|XM_290401.6| PREDICTED: Homo sapiens nuclear envelope pore membrane LOC441253, transcript variant 1 (LOC441253), mRNA Length = 1177 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 205 gaagaagaagaaaaggacagt 225 ||||||||||||||||||||| Sbjct: 896 gaagaagaagaaaaggacagt 916
>gb|AC073108.9| Homo sapiens BAC clone RP11-481D5 from 7, complete sequence Length = 95422 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 205 gaagaagaagaaaaggacagt 225 ||||||||||||||||||||| Sbjct: 31059 gaagaagaagaaaaggacagt 31079
>gb|AC158130.7| Mus musculus chromosome 19, clone RP24-360F11, complete sequence Length = 206879 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 134 tagaaagctagcaagctgctg 154 ||||||||||||||||||||| Sbjct: 142139 tagaaagctagcaagctgctg 142159
>dbj|AK031448.1| Mus musculus 13 days embryo male testis cDNA, RIKEN full-length enriched library, clone:6030433N15 product:unclassifiable, full insert sequence Length = 3088 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 134 tagaaagctagcaagctgctg 154 ||||||||||||||||||||| Sbjct: 2715 tagaaagctagcaagctgctg 2695
>gb|AC010967.3| Homo sapiens BAC clone RP11-7H13 from 2, complete sequence Length = 197328 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 274 gcttcagaatcaacacaagac 294 ||||||||||||||||||||| Sbjct: 110170 gcttcagaatcaacacaagac 110190
>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome Length = 4659019 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 297 agcgaaagaaccaagttgctc 317 ||||||||||||||||||||| Sbjct: 680685 agcgaaagaaccaagttgctc 680705
>gb|BC082993.1| Homo sapiens nuclear envelope pore membrane LOC441253, mRNA (cDNA clone IMAGE:6176382) Length = 5844 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 205 gaagaagaagaaaaggacagt 225 ||||||||||||||||||||| Sbjct: 1024 gaagaagaagaaaaggacagt 1044
>gb|U10099.1|HSU10099 Human POM-ZP3 mRNA, complete cds Length = 1496 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 205 gaagaagaagaaaaggacagt 225 ||||||||||||||||||||| Sbjct: 852 gaagaagaagaaaaggacagt 872
>gb|AC153729.1| Mus musculus BAC RP23-88C11 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 250801 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 267 cagaatggcttcagaatcaa 286 |||||||||||||||||||| Sbjct: 9773 cagaatggcttcagaatcaa 9792
>ref|NM_003895.2| Homo sapiens synaptojanin 1 (SYNJ1), transcript variant 1, mRNA Length = 6997 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 71 tgcacactatttgttctatc 90 |||||||||||||||||||| Sbjct: 1224 tgcacactatttgttctatc 1205
>gb|AC123744.8| Mus musculus chromosome 7, clone RP24-120F8, complete sequence Length = 160977 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 110 ttatctatttctctgaatat 129 |||||||||||||||||||| Sbjct: 67620 ttatctatttctctgaatat 67601
>ref|XM_864353.1| PREDICTED: Bos taurus similar to pyrroline-5-carboxylate synthetase isoform 1, transcript variant 2 (LOC514759), mRNA Length = 3336 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 625 aattctctttgcatgcttca 644 |||||||||||||||||||| Sbjct: 309 aattctctttgcatgcttca 290
>ref|XM_872596.1| PREDICTED: Bos taurus similar to pyrroline-5-carboxylate synthetase isoform 1, transcript variant 4 (LOC514759), mRNA Length = 3360 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 625 aattctctttgcatgcttca 644 |||||||||||||||||||| Sbjct: 309 aattctctttgcatgcttca 290
>ref|XM_872505.1| PREDICTED: Bos taurus similar to pyrroline-5-carboxylate synthetase isoform 1, transcript variant 3 (LOC514759), mRNA Length = 2024 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 625 aattctctttgcatgcttca 644 |||||||||||||||||||| Sbjct: 309 aattctctttgcatgcttca 290
>gb|AC163753.5| Pan troglodytes BAC clone CH251-295G5 from chromosome unknown, complete sequence Length = 176946 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 71 tgcacactatttgttctatc 90 |||||||||||||||||||| Sbjct: 65757 tgcacactatttgttctatc 65738
>ref|XM_851477.1| PREDICTED: Canis familiaris similar to synaptojanin 1 isoform b, transcript variant 5 (LOC478403), mRNA Length = 2870 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 71 tgcacactatttgttctatc 90 |||||||||||||||||||| Sbjct: 1267 tgcacactatttgttctatc 1248
>ref|XM_851437.1| PREDICTED: Canis familiaris similar to synaptojanin 1 isoform b, transcript variant 4 (LOC478403), mRNA Length = 2823 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 71 tgcacactatttgttctatc 90 |||||||||||||||||||| Sbjct: 1220 tgcacactatttgttctatc 1201
>ref|XM_535580.2| PREDICTED: Canis familiaris similar to synaptojanin 1 isoform b, transcript variant 1 (LOC478403), mRNA Length = 4802 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 71 tgcacactatttgttctatc 90 |||||||||||||||||||| Sbjct: 1267 tgcacactatttgttctatc 1248
>ref|XM_851354.1| PREDICTED: Canis familiaris similar to synaptojanin 1 isoform b, transcript variant 3 (LOC478403), mRNA Length = 4820 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 71 tgcacactatttgttctatc 90 |||||||||||||||||||| Sbjct: 1267 tgcacactatttgttctatc 1248
>ref|XM_851310.1| PREDICTED: Canis familiaris similar to synaptojanin 1 isoform b, transcript variant 2 (LOC478403), mRNA Length = 2921 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 71 tgcacactatttgttctatc 90 |||||||||||||||||||| Sbjct: 1267 tgcacactatttgttctatc 1248
>gb|AC117678.16| Mus musculus chromosome 6, clone RP23-421M9, complete sequence Length = 204437 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 570 attctatttccagctgcagc 589 |||||||||||||||||||| Sbjct: 169011 attctatttccagctgcagc 169030
>gb|AC124738.5| Mus musculus BAC clone RP23-344C15 from chromosome 14, complete sequence Length = 204590 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 571 ttctatttccagctgcagca 590 |||||||||||||||||||| Sbjct: 182556 ttctatttccagctgcagca 182537
>ref|XM_756722.1| Ustilago maydis 521 hypothetical protein (UM05668.1) partial mRNA Length = 5325 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 318 cagatggaagtactgctggc 337 |||||||||||||||||||| Sbjct: 4929 cagatggaagtactgctggc 4910
>gb|AC132244.3| Mus musculus BAC clone RP24-419I10 from chromosome 14, complete sequence Length = 185581 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 571 ttctatttccagctgcagca 590 |||||||||||||||||||| Sbjct: 134538 ttctatttccagctgcagca 134557
>gb|AC125179.4| Mus musculus BAC clone RP23-321N8 from chromosome 16, complete sequence Length = 193474 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 509 aacatcaaaaacaccaccaccatc 532 ||||||| |||||||||||||||| Sbjct: 98540 aacatcataaacaccaccaccatc 98563
>gb|AC093856.3| Homo sapiens BAC clone RP11-518I12 from 7, complete sequence Length = 205317 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 621 acagaattctctttgcatgc 640 |||||||||||||||||||| Sbjct: 29420 acagaattctctttgcatgc 29439
>gb|BC105337.1| Bos taurus similar to pyrroline-5-carboxylate synthetase isoform 1, transcript variant 2, mRNA (cDNA clone MGC:127306 IMAGE:7948807), complete cds Length = 3410 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 625 aattctctttgcatgcttca 644 |||||||||||||||||||| Sbjct: 333 aattctctttgcatgcttca 314
>gb|BC019630.1| Homo sapiens synaptojanin 1, mRNA (cDNA clone IMAGE:4940362), containing frame-shift errors Length = 2198 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 71 tgcacactatttgttctatc 90 |||||||||||||||||||| Sbjct: 1288 tgcacactatttgttctatc 1269
>ref|XM_505504.1| Yarrowia lipolytica CLIB122, YALI0F16665g predicted mRNA Length = 5268 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 262 aggttcagaatggcttcaga 281 |||||||||||||||||||| Sbjct: 1898 aggttcagaatggcttcaga 1879
>gb|AC146344.1| Mus musculus strain C57BL/6J clone rp23-74a5, complete sequence Length = 197449 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 104 gactcattatctatttctct 123 |||||||||||||||||||| Sbjct: 16044 gactcattatctatttctct 16025
>emb|AL356118.15| Human DNA sequence from clone RP11-487A2 on chromosome 13, complete sequence Length = 166245 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 511 catcaaaaacaccaccacca 530 |||||||||||||||||||| Sbjct: 37736 catcaaaaacaccaccacca 37755
>gb|BC098395.1| Homo sapiens synaptojanin 1, mRNA (cDNA clone IMAGE:30531044), complete cds Length = 4551 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 71 tgcacactatttgttctatc 90 |||||||||||||||||||| Sbjct: 1267 tgcacactatttgttctatc 1248
>emb|BX005124.7| Zebrafish DNA sequence from clone CH211-284A16 in linkage group 20 Contains the 5' end of the xrn2 gene for 5'-3' exoribonuclease 2, a novel gene and a CpG island, complete sequence Length = 148325 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 501 ctgtcttgaacatcaaaaac 520 |||||||||||||||||||| Sbjct: 58027 ctgtcttgaacatcaaaaac 58008
>gb|AF336378.1| Mus musculus Kel blood group protein (Kel), epithelial calcium channel 1 (Ecac1), epithelial calcium channel 2 (Ecac2), and ephrin type A receptor (Mep) genes, complete cds; and T cell receptor beta chain (Tcr) gene, partial cds Length = 169781 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 570 attctatttccagctgcagc 589 |||||||||||||||||||| Sbjct: 69679 attctatttccagctgcagc 69660
>dbj|AP008231.1| Synechococcus elongatus PCC 6301 DNA, complete genome Length = 2696255 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 409 taggtgcgccagtgttcttg 428 |||||||||||||||||||| Sbjct: 1463261 taggtgcgccagtgttcttg 1463242
>gb|AC096576.3| Homo sapiens BAC clone RP11-556G22 from 4, complete sequence Length = 213044 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 543 taaaaattaacagctatgta 562 |||||||||||||||||||| Sbjct: 111805 taaaaattaacagctatgta 111824
>gb|AC105415.2| Homo sapiens BAC clone RP11-265O12 from 4, complete sequence Length = 185848 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 130 agcctagaaagctagcaagctgct 153 |||| ||||||||||||||||||| Sbjct: 141830 agcccagaaagctagcaagctgct 141853
>gb|AC011744.8| Homo sapiens BAC clone RP11-324I10 from 4, complete sequence Length = 191596 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 130 agcctagaaagctagcaagctgct 153 |||| ||||||||||||||||||| Sbjct: 182500 agcccagaaagctagcaagctgct 182523
>gb|AC163646.2| Mus musculus BAC clone RP23-207D1 from chromosome 14, complete sequence Length = 185289 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 202 atggaagaagaagaaaagga 221 |||||||||||||||||||| Sbjct: 103773 atggaagaagaagaaaagga 103792
>emb|BX813317.11| Mouse DNA sequence from clone RP24-297H17 on chromosome 2, complete sequence Length = 157571 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 355 tgaattctatggttcctgaa 374 |||||||||||||||||||| Sbjct: 58968 tgaattctatggttcctgaa 58987
>gb|U19464.1|PTU19464 Paramecium tetraurelia outer arm dynein beta heavy chain gene, complete cds Length = 16556 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 612 ggtagtccaacagaattctc 631 |||||||||||||||||||| Sbjct: 9115 ggtagtccaacagaattctc 9096
>gb|BC109910.1| Bos taurus cDNA clone MGC:133720 IMAGE:8047558, complete cds Length = 1398 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 200 gtatggaagaagaagaaaaggaca 223 |||||||||||||| ||||||||| Sbjct: 302 gtatggaagaagaacaaaaggaca 325
>gb|AC153969.12| Mus musculus 10 BAC RP24-86H7 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 209599 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 267 cagaatggcttcagaatcaa 286 |||||||||||||||||||| Sbjct: 130549 cagaatggcttcagaatcaa 130530
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 254 aagctcgaaggttcagaatg 273 |||||||||||||||||||| Sbjct: 4662954 aagctcgaaggttcagaatg 4662973
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 202 atggaagaagaagaaaagga 221 |||||||||||||||||||| Sbjct: 215151 atggaagaagaagaaaagga 215132
>gb|AC068492.2| Homo sapiens BAC clone RP11-809C23 from 2, complete sequence Length = 172281 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 511 catcaaaaacaccaccacca 530 |||||||||||||||||||| Sbjct: 127950 catcaaaaacaccaccacca 127931
>dbj|AP000038.1| Homo sapiens genomic DNA, chromosome 21q22.1, segment 9/28, complete sequence Length = 100000 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 71 tgcacactatttgttctatc 90 |||||||||||||||||||| Sbjct: 5864 tgcacactatttgttctatc 5883
>dbj|BA000043.1| Geobacillus kaustophilus HTA426 DNA, complete genome Length = 3544776 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 520 caccaccaccatcgcttcgc 539 |||||||||||||||||||| Sbjct: 1456733 caccaccaccatcgcttcgc 1456714
>dbj|AP002818.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0436E04 Length = 144644 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 202 atggaagaagaagaaaagga 221 |||||||||||||||||||| Sbjct: 56821 atggaagaagaagaaaagga 56802
>emb|AL954210.1| Pan troglodytes chromosome 22 clone RP43-012J05 map 22q22.11, complete sequence Length = 168835 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 71 tgcacactatttgttctatc 90 |||||||||||||||||||| Sbjct: 93704 tgcacactatttgttctatc 93723
>emb|Y16368.1|CDY16368 Calonectris diomedea random amplified polymorphic DNA, clone Cd-Rec1-O10f2 Length = 923 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 105 actcattatctatttctctg 124 |||||||||||||||||||| Sbjct: 904 actcattatctatttctctg 885
>tpe|BN000701.1| TPA: TPA_inf: Gossypium raimondii mRNA for leucoanthocyanidin reductase 2 (lar2 gene) Length = 1319 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 456 caagcagcaatggagttgca 475 |||||||||||||||||||| Sbjct: 551 caagcagcaatggagttgca 532
>tpe|BN000699.1| TPA: TPA_inf: Gossypium arboreum mRNA for leucoanthocyanidin reductase 2 (lar2 gene) Length = 1356 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 456 caagcagcaatggagttgca 475 |||||||||||||||||||| Sbjct: 563 caagcagcaatggagttgca 544
>dbj|AP003170.4| Homo sapiens genomic DNA, chromosome 11 clone:RP11-667M19, complete sequence Length = 178456 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 6 ccctcccttttctttgcact 25 |||||||||||||||||||| Sbjct: 156583 ccctcccttttctttgcact 156564
>dbj|AP000278.2| Homo sapiens genomic DNA, chromosome 21 clone:PQ62G5, complete sequence Length = 26077 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 71 tgcacactatttgttctatc 90 |||||||||||||||||||| Sbjct: 3848 tgcacactatttgttctatc 3867
>dbj|AP001714.1| Homo sapiens genomic DNA, chromosome 21q, section 58/105 Length = 340000 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 71 tgcacactatttgttctatc 90 |||||||||||||||||||| Sbjct: 310001 tgcacactatttgttctatc 310020
>dbj|AP001874.4| Homo sapiens genomic DNA, chromosome 11q, clone:CTD-2238L14, complete sequence Length = 124167 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 6 ccctcccttttctttgcact 25 |||||||||||||||||||| Sbjct: 33631 ccctcccttttctttgcact 33612
>gb|AF009040.1|AF009040 Homo sapiens synaptojanin mRNA, alternatively spliced, complete cds Length = 4781 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 71 tgcacactatttgttctatc 90 |||||||||||||||||||| Sbjct: 1224 tgcacactatttgttctatc 1205
>gb|AF009039.1|AF009039 Homo sapiens synaptojanin mRNA, alternatively spliced, complete cds Length = 4805 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 71 tgcacactatttgttctatc 90 |||||||||||||||||||| Sbjct: 1224 tgcacactatttgttctatc 1205
>ref|NM_001038051.1| Bos taurus similar to dynein 2 light intermediate chain isoform 1 (MGC133720), mRNA Length = 1398 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 200 gtatggaagaagaagaaaaggaca 223 |||||||||||||| ||||||||| Sbjct: 302 gtatggaagaagaacaaaaggaca 325
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 254 aagctcgaaggttcagaatg 273 |||||||||||||||||||| Sbjct: 4662935 aagctcgaaggttcagaatg 4662954
>emb|AL928750.3|CNS08CBN Oryza sativa chromosome 12, . BAC OSJNBa0063C08 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 147355 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 254 aagctcgaaggttcagaatg 273 |||||||||||||||||||| Sbjct: 89173 aagctcgaaggttcagaatg 89154
>emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB122 of Yarrowia lipolytica Length = 4003362 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 262 aggttcagaatggcttcaga 281 |||||||||||||||||||| Sbjct: 2230922 aggttcagaatggcttcaga 2230941
>dbj|AP005059.2| Homo sapiens genomic DNA, chromosome 18 clone:RP11-286N3, complete sequence Length = 213005 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 322 tggaagtactgctggccctt 341 |||||||||||||||||||| Sbjct: 68823 tggaagtactgctggccctt 68804
>emb|AL807786.6| Mouse DNA sequence from clone RP23-320I1 on chromosome 4, complete sequence Length = 206324 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 104 gactcattatctatttctct 123 |||||||||||||||||||| Sbjct: 88276 gactcattatctatttctct 88295
>ref|NM_203446.1| Homo sapiens synaptojanin 1 (SYNJ1), transcript variant 2, mRNA Length = 7039 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 71 tgcacactatttgttctatc 90 |||||||||||||||||||| Sbjct: 1290 tgcacactatttgttctatc 1271
>gb|CP000100.1| Synechococcus elongatus PCC 7942, complete genome Length = 2695903 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 409 taggtgcgccagtgttcttg 428 |||||||||||||||||||| Sbjct: 157622 taggtgcgccagtgttcttg 157641
>dbj|AP000182.1| Homo sapiens genomic DNA, chromosome 21q22.1, D21S226-AML region, clone Q78C10-f32E9, segment 9/21, complete sequence Length = 100000 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 71 tgcacactatttgttctatc 90 |||||||||||||||||||| Sbjct: 11840 tgcacactatttgttctatc 11859
>dbj|AB020717.2| Homo sapiens mRNA for KIAA0910 protein, partial cds Length = 6997 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 71 tgcacactatttgttctatc 90 |||||||||||||||||||| Sbjct: 1290 tgcacactatttgttctatc 1271
>dbj|AP000106.1| Homo sapiens genomic DNA of 21q22.1, GART and AML related, Q78C10-149C3 region, segment 9/20 Length = 100000 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 71 tgcacactatttgttctatc 90 |||||||||||||||||||| Sbjct: 11840 tgcacactatttgttctatc 11859 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7,185,956 Number of Sequences: 3902068 Number of extensions: 7185956 Number of successful extensions: 159671 Number of sequences better than 10.0: 113 Number of HSP's better than 10.0 without gapping: 113 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 159214 Number of HSP's gapped (non-prelim): 457 length of query: 645 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 622 effective length of database: 17,143,297,704 effective search space: 10663131171888 effective search space used: 10663131171888 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)