Clone Name | rbah61n16 |
---|---|
Clone Library Name | barley_pub |
>CAX1A_ORYSA (Q769E5) Vacuolar cation/proton exchanger 1a (Ca(2+)/H(+) exchanger| 1a) (OsCAX1a) Length = 451 Score = 82.4 bits (202), Expect = 7e-16 Identities = 39/50 (78%), Positives = 40/50 (80%) Frame = -2 Query: 528 TSHYLKGVLLLLCYIVIGACFFVTRQTEHHANGNGTLLDVPMGPMIVQVA 379 TSHYLKG+LLLLCYIVIGACFFV RQ HAN NG LLDVP G M VQ A Sbjct: 402 TSHYLKGILLLLCYIVIGACFFVARQPAGHANSNGALLDVPTGSMSVQAA 451
>CAX1B_ORYSA (Q5TKG3) Vacuolar cation/proton exchanger 1b (Ca(2+)/H(+) exchanger| 1b) (OsCAX1b) Length = 453 Score = 42.7 bits (99), Expect = 6e-04 Identities = 17/25 (68%), Positives = 21/25 (84%) Frame = -2 Query: 525 SHYLKGVLLLLCYIVIGACFFVTRQ 451 SHYLKG++L+LCY VI CFFV R+ Sbjct: 413 SHYLKGLILVLCYAVISVCFFVIRR 437
>CAX2_ORYSA (Q5KQN0) Vacuolar cation/proton exchanger 2 (Ca(2+)/H(+) exchanger| 2) (OsCAX2) Length = 437 Score = 37.0 bits (84), Expect = 0.033 Identities = 13/23 (56%), Positives = 20/23 (86%) Frame = -2 Query: 528 TSHYLKGVLLLLCYIVIGACFFV 460 TS+Y KG++L+LCY+++ A FFV Sbjct: 405 TSNYFKGLMLILCYLIVAASFFV 427
>CAX3_ORYSA (Q6K1C4) Vacuolar cation/proton exchanger 3 (Ca(2+)/H(+) exchanger| 3) (OsCAX3) Length = 417 Score = 35.4 bits (80), Expect = 0.097 Identities = 12/22 (54%), Positives = 20/22 (90%) Frame = -2 Query: 525 SHYLKGVLLLLCYIVIGACFFV 460 ++YLKG++L+LCY+++ A FFV Sbjct: 387 ANYLKGLMLILCYLIVAASFFV 408
>CAX1C_ORYSA (Q5KTQ9) Vacuolar cation/proton exchanger 1c (Ca(2+)/H(+) exchanger| 1c) (OsCAX1c) Length = 450 Score = 34.3 bits (77), Expect = 0.22 Identities = 14/23 (60%), Positives = 17/23 (73%) Frame = -2 Query: 522 HYLKGVLLLLCYIVIGACFFVTR 454 HYLKG+ L+ YIVI CFFV + Sbjct: 418 HYLKGLNLVFSYIVIAVCFFVMK 440
>CAX4_ORYSA (Q6YXZ1) Putative vacuolar cation/proton exchanger 4 (Ca(2+)/H(+)| exchanger 4) (OsCAX4) Length = 447 Score = 33.1 bits (74), Expect = 0.48 Identities = 15/41 (36%), Positives = 25/41 (60%) Frame = -2 Query: 528 TSHYLKGVLLLLCYIVIGACFFVTRQTEHHANGNGTLLDVP 406 TS+ +KG++L LCY+++ A F+V HA+ N + P Sbjct: 410 TSNCVKGLMLFLCYLIVAASFYV------HADPNSKASEKP 444
>SF01_MOUSE (Q64213) Splicing factor 1 (Zinc finger protein 162) (Transcription| factor ZFM1) (mZFM) (Zinc finger gene in MEN1 locus) (Mammalian branch point-binding protein mBBP) (BBP) (CW17) Length = 653 Score = 30.8 bits (68), Expect = 2.4 Identities = 20/52 (38%), Positives = 25/52 (48%), Gaps = 7/52 (13%) Frame = -1 Query: 520 LPQGSPPPP--MLHCYRRLL-----LCYETNRTSRERQRHAAGCPNGSHDCP 386 LP G+PPPP + C LL LC NR +R R + G + S D P Sbjct: 577 LPPGAPPPPTCSIECLLCLLSSPNSLCLSPNRAARIPPRGSDGPSHESEDFP 628
>CHRD_XENLA (Q91713) Chordin precursor (Organizer-specific secreted dorsalizing| factor) Length = 941 Score = 30.0 bits (66), Expect = 4.1 Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 1/45 (2%) Frame = -1 Query: 517 PQGSPPPPMLHCYRRLLLCY-ETNRTSRERQRHAAGCPNGSHDCP 386 P P ++HC +LCY E R+ R + C N HDCP Sbjct: 58 PDLGEPFGVMHC----VLCYCEPQRSRRGKPSGKVSCKNIKHDCP 98
>PPCK_NEUCR (Q7RVS9) Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49)| Length = 561 Score = 29.6 bits (65), Expect = 5.3 Identities = 15/55 (27%), Positives = 24/55 (43%), Gaps = 11/55 (20%) Frame = -2 Query: 330 IENEVFEPEATKLCLSYMCIT-----------VPRKRIPCVQSPHPKESVDYCCE 199 +EN VF PE ++ +T +P +IPC+ HPK + C+ Sbjct: 325 LENVVFNPETREVDYGDATLTENTRCAYPIEYIPNAKIPCLSPNHPKNIILLTCD 379
>YXX5_CAEEL (Q18179) Putative neuropeptide Y receptor (NPY-R)| Length = 455 Score = 28.9 bits (63), Expect = 9.1 Identities = 16/38 (42%), Positives = 21/38 (55%) Frame = +2 Query: 269 VMHIYDRHNLVASGSNTSFSILHTF*LVEAALLVISYA 382 V HI++ LV S S T+FSI H + A L + YA Sbjct: 289 VFHIFNTFELVNSFSVTTFSICHCLAMCSACLNPLIYA 326 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 74,881,229 Number of Sequences: 219361 Number of extensions: 1553128 Number of successful extensions: 3605 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 3523 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3605 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4027872870 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)