Clone Name | rbah61n16 |
---|---|
Clone Library Name | barley_pub |
>gb|AY108295.1| Zea mays PCO087284 mRNA sequence Length = 1825 Score = 65.9 bits (33), Expect = 1e-07 Identities = 63/73 (86%) Strand = Plus / Minus Query: 455 ctcgtaacaaagaagcaagcgccgataacaatgtagcataggaggaggaggactcccttg 514 ||||||||||||||||| || ||||| ||||||||||| || || || |||| |||||| Sbjct: 1410 ctcgtaacaaagaagcatgcaccgatcacaatgtagcacagcagcagaaggatccccttg 1351 Query: 515 aggtaatgtgacg 527 ||||| ||||||| Sbjct: 1350 aggtagtgtgacg 1338
>ref|NM_193473.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1275 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Minus Query: 473 gcgccgataacaatgtagcataggaggaggaggactcccttgaggtaatgtga 525 |||||||| ||||||||||| ||||||||||| | ||||| ||||||||||| Sbjct: 1178 gcgccgatgacaatgtagcacaggaggaggagaatccccttcaggtaatgtga 1126
>gb|AF489111.1| Oryza sativa putative Ca2+/H+ exchanger mRNA, complete cds Length = 1065 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Minus Query: 473 gcgccgataacaatgtagcataggaggaggaggactcccttgaggtaatgtga 525 |||||||| ||||||||||| ||||||||||| | ||||| ||||||||||| Sbjct: 929 gcgccgatgacaatgtagcacaggaggaggagaatccccttcaggtaatgtga 877
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 473 gcgccgataacaatgtagcataggaggaggaggactcccttgaggtaatgtga 525 |||||||| ||||||||||| ||||||||||| | ||||| ||||||||||| Sbjct: 21068752 gcgccgatgacaatgtagcacaggaggaggagaatccccttcaggtaatgtga 21068804 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 192 tgcttttctcgcaacagtaatcaac 216 ||||||||| ||||||||||||||| Sbjct: 33811225 tgcttttcttgcaacagtaatcaac 33811249
>dbj|AP003443.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1144D11 Length = 157943 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 473 gcgccgataacaatgtagcataggaggaggaggactcccttgaggtaatgtga 525 |||||||| ||||||||||| ||||||||||| | ||||| ||||||||||| Sbjct: 36297 gcgccgatgacaatgtagcacaggaggaggagaatccccttcaggtaatgtga 36349
>dbj|AP003372.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1014_G12 Length = 158830 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 473 gcgccgataacaatgtagcataggaggaggaggactcccttgaggtaatgtga 525 |||||||| ||||||||||| ||||||||||| | ||||| ||||||||||| Sbjct: 131954 gcgccgatgacaatgtagcacaggaggaggagaatccccttcaggtaatgtga 132006
>dbj|AB112656.1| Oryza sativa (japonica cultivar-group) OsCAX1a mRNA for cation/proton exchanger 1a, complete cds Length = 1895 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Minus Query: 473 gcgccgataacaatgtagcataggaggaggaggactcccttgaggtaatgtga 525 |||||||| ||||||||||| ||||||||||| | ||||| ||||||||||| Sbjct: 1460 gcgccgatgacaatgtagcacaggaggaggagaatccccttcaggtaatgtga 1408
>dbj|AK100765.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023119J24, full insert sequence Length = 1962 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Minus Query: 473 gcgccgataacaatgtagcataggaggaggaggactcccttgaggtaatgtga 525 |||||||| ||||||||||| ||||||||||| | ||||| ||||||||||| Sbjct: 1450 gcgccgatgacaatgtagcacaggaggaggagaatccccttcaggtaatgtga 1398
>gb|AY133219.1| Oryza latifolia clone 78-2 pangrangja MITE element, partial sequence Length = 458 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Minus Query: 192 tgcttttctcgcaacagtaatcaac 216 ||||||||||||||||||||||||| Sbjct: 274 tgcttttctcgcaacagtaatcaac 250
>gb|AY133218.1| Oryza grandiglumis clone 77-9 pangrangja MITE element, partial sequence Length = 458 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Minus Query: 192 tgcttttctcgcaacagtaatcaac 216 ||||||||||||||||||||||||| Sbjct: 274 tgcttttctcgcaacagtaatcaac 250
>gb|AY133216.1| Oryza alta clone 74-2 pangrangja MITE element, partial sequence Length = 458 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Minus Query: 192 tgcttttctcgcaacagtaatcaac 216 ||||||||||||||||||||||||| Sbjct: 274 tgcttttctcgcaacagtaatcaac 250
>gb|AY133214.1| Oryza alta clone 75-8 pangrangja MITE element, partial sequence Length = 458 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Minus Query: 192 tgcttttctcgcaacagtaatcaac 216 ||||||||||||||||||||||||| Sbjct: 274 tgcttttctcgcaacagtaatcaac 250
>gb|AC090699.10| Homo sapiens chromosome 17, clone RP11-794C22, complete sequence Length = 138379 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Minus Query: 157 tcaagaaaataaagaaaaaatctggta 183 ||||||||| ||||||||||||||||| Sbjct: 123732 tcaagaaaaaaaagaaaaaatctggta 123706
>emb|BX936408.10| Zebrafish DNA sequence from clone CH211-195A15 in linkage group 17, complete sequence Length = 198387 Score = 44.1 bits (22), Expect = 0.46 Identities = 25/26 (96%) Strand = Plus / Minus Query: 444 gttctgtttgtctcgtaacaaagaag 469 ||||||||||||| |||||||||||| Sbjct: 99432 gttctgtttgtcttgtaacaaagaag 99407
>gb|AC133078.3| Mus musculus BAC clone RP24-444O21 from chromosome 10, complete sequence Length = 141420 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Minus Query: 162 aaaataaagaaaaaatctggta 183 |||||||||||||||||||||| Sbjct: 102767 aaaataaagaaaaaatctggta 102746
>gb|AC123028.4| Mus musculus BAC clone RP24-553H21 from chromosome 10, complete sequence Length = 175143 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 162 aaaataaagaaaaaatctggta 183 |||||||||||||||||||||| Sbjct: 130799 aaaataaagaaaaaatctggta 130820
>ref|NM_190915.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1884 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 192 tgcttttctcgcaacagtaatcaac 216 ||||||||| ||||||||||||||| Sbjct: 771 tgcttttcttgcaacagtaatcaac 747
>gb|AY133217.1| Oryza punctata clone 70-6 pangrangja MITE element, partial sequence Length = 458 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 192 tgcttttctcgcaacagtaatcaac 216 ||||||||| ||||||||||||||| Sbjct: 274 tgcttttcttgcaacagtaatcaac 250
>gb|AY133215.1| Oryza punctata clone 71-7 pangrangja MITE element, partial sequence Length = 458 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 192 tgcttttctcgcaacagtaatcaac 216 ||||||||| ||||||||||||||| Sbjct: 274 tgcttttcttgcaacagtaatcaac 250
>gb|AC149215.3| Mus musculus BAC clone RP24-201G21 from chromosome 7, complete sequence Length = 174164 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 160 agaaaataaagaaaaaatctg 180 ||||||||||||||||||||| Sbjct: 84572 agaaaataaagaaaaaatctg 84592
>gb|AC155823.8| Mus musculus BAC clone RP23-348C5 from chromosome 8, complete sequence Length = 219597 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 494 aggaggaggaggactcccttg 514 ||||||||||||||||||||| Sbjct: 152563 aggaggaggaggactcccttg 152583
>ref|XM_965355.1| PREDICTED: Tribolium castaneum similar to CG3523-PA (LOC659016), mRNA Length = 6468 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 158 caagaaaataaagaaaaaatc 178 ||||||||||||||||||||| Sbjct: 6118 caagaaaataaagaaaaaatc 6138
>gb|AY112735.1| Bean common mosaic virus strain NL1, complete genome Length = 10054 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 267 cagttatgcacatatatgata 287 ||||||||||||||||||||| Sbjct: 3724 cagttatgcacatatatgata 3744
>gb|DQ054364.1|DQ054364S1 Bean common mosaic virus polyprotein precursor, gene, partial cds Length = 4537 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 267 cagttatgcacatatatgata 287 ||||||||||||||||||||| Sbjct: 3078 cagttatgcacatatatgata 3098
>gb|U32996.1|HSMAP19 Human microtuble-associated protein-2 (MAP-2) gene, exon 19 Length = 3814 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 159 aagaaaataaagaaaaaatct 179 ||||||||||||||||||||| Sbjct: 1449 aagaaaataaagaaaaaatct 1429
>dbj|AP003293.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0691E06 Length = 166497 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 192 tgcttttctcgcaacagtaatcaac 216 ||||||||| ||||||||||||||| Sbjct: 50272 tgcttttcttgcaacagtaatcaac 50296
>gb|AC004398.1|AC004398 Homo sapiens Cosmid g5129z190, complete sequence Length = 42304 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 157 tcaagaaaataaagaaaaaat 177 ||||||||||||||||||||| Sbjct: 13445 tcaagaaaataaagaaaaaat 13425
>dbj|AP006428.1| Lotus japonicus genomic DNA, chromosome 5, clone:LjT04J15, TM0321, complete sequence Length = 127049 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 185 aattgcatgcttttctcgcaa 205 ||||||||||||||||||||| Sbjct: 100305 aattgcatgcttttctcgcaa 100325
>ref|XM_639626.1| Dictyostelium discoideum hypothetical protein (DDB0168059), partial mRNA Length = 6147 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 154 ggttcaagaaaataaagaaa 173 |||||||||||||||||||| Sbjct: 6063 ggttcaagaaaataaagaaa 6082
>ref|XM_639440.1| Dictyostelium discoideum hypothetical protein (DDB0217329), partial mRNA Length = 6147 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 154 ggttcaagaaaataaagaaa 173 |||||||||||||||||||| Sbjct: 6063 ggttcaagaaaataaagaaa 6082
>ref|XM_513484.1| PREDICTED: Pan troglodytes similar to dJ677H15.2 (splicing factor, arginine/serine-rich 11) (LOC456937), mRNA Length = 1961 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 493 taggaggaggaggactccct 512 |||||||||||||||||||| Sbjct: 981 taggaggaggaggactccct 1000
>ref|NM_004768.2| Homo sapiens splicing factor, arginine/serine-rich 11 (SFRS11), mRNA Length = 2775 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 493 taggaggaggaggactccct 512 |||||||||||||||||||| Sbjct: 889 taggaggaggaggactccct 908
>gb|AE017355.1| Bacillus thuringiensis serovar konkukian str. 97-27, complete genome Length = 5237682 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 158 caagaaaataaagaaaaaat 177 |||||||||||||||||||| Sbjct: 1579335 caagaaaataaagaaaaaat 1579354
>ref|XM_865151.1| PREDICTED: Bos taurus similar to FK506 binding protein 10 precursor (Peptidyl-prolyl cis-trans isomerase) (PPIase) (Rotamase) (65 kDa FK506-binding protein) (FKBP65) (Immunophilin FKBP65), transcript variant 2 (LOC535310), mRNA Length = 2726 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 411 catccagcagcgtgccgttg 430 |||||||||||||||||||| Sbjct: 711 catccagcagcgtgccgttg 692
>ref|XM_875210.1| PREDICTED: Bos taurus similar to FK506 binding protein 10 precursor (Peptidyl-prolyl cis-trans isomerase) (PPIase) (Rotamase) (65 kDa FK506-binding protein) (FKBP65) (Immunophilin FKBP65), transcript variant 3 (LOC535310), mRNA Length = 2726 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 411 catccagcagcgtgccgttg 430 |||||||||||||||||||| Sbjct: 711 catccagcagcgtgccgttg 692
>ref|XM_615360.2| PREDICTED: Bos taurus similar to FK506 binding protein 10 precursor (Peptidyl-prolyl cis-trans isomerase) (PPIase) (Rotamase) (65 kDa FK506-binding protein) (FKBP65) (Immunophilin FKBP65), transcript variant 1 (LOC535310), mRNA Length = 2714 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 411 catccagcagcgtgccgttg 430 |||||||||||||||||||| Sbjct: 711 catccagcagcgtgccgttg 692
>gb|AE017334.2| Bacillus anthracis str. 'Ames Ancestor', complete genome Length = 5227419 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 158 caagaaaataaagaaaaaat 177 |||||||||||||||||||| Sbjct: 1553185 caagaaaataaagaaaaaat 1553204
>gb|BC040436.1| Homo sapiens splicing factor, arginine/serine-rich 11, mRNA (cDNA clone MGC:48837 IMAGE:5518580), complete cds Length = 2351 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 493 taggaggaggaggactccct 512 |||||||||||||||||||| Sbjct: 844 taggaggaggaggactccct 863
>gb|AE017225.1| Bacillus anthracis str. Sterne, complete genome Length = 5228663 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 158 caagaaaataaagaaaaaat 177 |||||||||||||||||||| Sbjct: 1553139 caagaaaataaagaaaaaat 1553158
>ref|XM_596187.2| PREDICTED: Bos taurus similar to NM23-H8 (LOC518005), mRNA Length = 1767 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 155 gttcaagaaaataaagaaaaaatc 178 |||||||||| ||||||||||||| Sbjct: 508 gttcaagaaattaaagaaaaaatc 531
>ref|XM_872994.1| PREDICTED: Bos taurus similar to splicing factor p54, transcript variant 16 (LOC513451), mRNA Length = 4197 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 493 taggaggaggaggactccct 512 |||||||||||||||||||| Sbjct: 916 taggaggaggaggactccct 935
>ref|XM_872908.1| PREDICTED: Bos taurus similar to splicing factor p54, transcript variant 15 (LOC513451), mRNA Length = 4290 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 493 taggaggaggaggactccct 512 |||||||||||||||||||| Sbjct: 985 taggaggaggaggactccct 1004
>ref|XM_872806.1| PREDICTED: Bos taurus similar to splicing factor p54, transcript variant 14 (LOC513451), mRNA Length = 4137 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 493 taggaggaggaggactccct 512 |||||||||||||||||||| Sbjct: 916 taggaggaggaggactccct 935
>ref|XM_872718.1| PREDICTED: Bos taurus similar to splicing factor p54, transcript variant 13 (LOC513451), mRNA Length = 4909 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 493 taggaggaggaggactccct 512 |||||||||||||||||||| Sbjct: 1625 taggaggaggaggactccct 1644
>ref|XM_591132.2| PREDICTED: Bos taurus similar to splicing factor p54, transcript variant 1 (LOC513451), mRNA Length = 4188 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 493 taggaggaggaggactccct 512 |||||||||||||||||||| Sbjct: 919 taggaggaggaggactccct 938
>ref|XM_872510.1| PREDICTED: Bos taurus similar to splicing factor p54, transcript variant 12 (LOC513451), mRNA Length = 5386 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 493 taggaggaggaggactccct 512 |||||||||||||||||||| Sbjct: 2102 taggaggaggaggactccct 2121
>ref|XM_872407.1| PREDICTED: Bos taurus similar to splicing factor p54, transcript variant 11 (LOC513451), mRNA Length = 3902 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 493 taggaggaggaggactccct 512 |||||||||||||||||||| Sbjct: 618 taggaggaggaggactccct 637
>ref|XM_872310.1| PREDICTED: Bos taurus similar to splicing factor p54, transcript variant 10 (LOC513451), mRNA Length = 3864 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 493 taggaggaggaggactccct 512 |||||||||||||||||||| Sbjct: 916 taggaggaggaggactccct 935
>ref|XM_872193.1| PREDICTED: Bos taurus similar to splicing factor p54, transcript variant 9 (LOC513451), mRNA Length = 5680 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 493 taggaggaggaggactccct 512 |||||||||||||||||||| Sbjct: 2396 taggaggaggaggactccct 2415
>ref|XM_864072.1| PREDICTED: Bos taurus similar to splicing factor p54, transcript variant 2 (LOC513451), mRNA Length = 1268 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 493 taggaggaggaggactccct 512 |||||||||||||||||||| Sbjct: 916 taggaggaggaggactccct 935
>gb|BC113250.1| Bos taurus FK506 binding protein 10, 65 kDa, transcript variant 2, mRNA (cDNA clone MGC:138074 IMAGE:8084218), complete cds Length = 2674 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 411 catccagcagcgtgccgttg 430 |||||||||||||||||||| Sbjct: 628 catccagcagcgtgccgttg 609
>emb|CR853302.11| Zebrafish DNA sequence from clone DKEY-91M3 in linkage group 11, complete sequence Length = 231837 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 159 aagaaaataaagaaaaaatc 178 |||||||||||||||||||| Sbjct: 21240 aagaaaataaagaaaaaatc 21221
>gb|AC114817.3| Mus musculus BAC clone RP23-28O15 from 14, complete sequence Length = 211624 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 162 aaaataaagaaaaaatctggtaca 185 ||||||||||||||| |||||||| Sbjct: 146094 aaaataaagaaaaaacctggtaca 146071
>ref|XM_721459.1| Plasmodium yoelii yoelii str. 17XNL hypothetical protein (PY05985) partial mRNA Length = 586 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 157 tcaagaaaataaagaaaaaa 176 |||||||||||||||||||| Sbjct: 54 tcaagaaaataaagaaaaaa 73
>gb|CP000001.1| Bacillus cereus E33L, complete genome Length = 5300915 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 158 caagaaaataaagaaaaaat 177 |||||||||||||||||||| Sbjct: 1577951 caagaaaataaagaaaaaat 1577970
>gb|BC017359.2| Homo sapiens splicing factor, arginine/serine-rich 11, mRNA (cDNA clone IMAGE:5092873), partial cds Length = 1423 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 493 taggaggaggaggactccct 512 |||||||||||||||||||| Sbjct: 1006 taggaggaggaggactccct 1025
>gb|BC002784.2| Homo sapiens splicing factor, arginine/serine-rich 11, mRNA (cDNA clone IMAGE:3615263), partial cds Length = 1098 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 493 taggaggaggaggactccct 512 |||||||||||||||||||| Sbjct: 900 taggaggaggaggactccct 919
>emb|CR762396.8| Zebrafish DNA sequence from clone DKEY-262O12 in linkage group 1, complete sequence Length = 163635 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 172 aaaaatctggtacaattgcatgct 195 ||||||||||||||||| |||||| Sbjct: 124764 aaaaatctggtacaatttcatgct 124741
>emb|AL353771.8| Human DNA sequence from clone RP4-677H15 on chromosome 1p31.3-32.3 Contains gene FLJ20331, two novel genes, the SFRS11 gene for arginine/serine-rich 11 splicing factor and the 3' end of gene DKFZP566D1346, complete sequence Length = 131612 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 493 taggaggaggaggactccct 512 |||||||||||||||||||| Sbjct: 97842 taggaggaggaggactccct 97861
>emb|AL031684.14|HS917N8 Human DNA sequence from clone RP5-917N8 on chromosome 20p11.22-12.1 Contains STSs and GSSs, complete sequence Length = 143712 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 133 aataaaaatagctagcagta 152 |||||||||||||||||||| Sbjct: 7035 aataaaaatagctagcagta 7054
>emb|BX640645.1|HSM806696 Homo sapiens mRNA; cDNA DKFZp686P22142 (from clone DKFZp686P22142) Length = 4093 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 493 taggaggaggaggactccct 512 |||||||||||||||||||| Sbjct: 2126 taggaggaggaggactccct 2145
>emb|CR861437.1| Pongo pygmaeus mRNA; cDNA DKFZp459L092 (from clone DKFZp459L092) Length = 3900 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 241 aacgcatggaattctcttcc 260 |||||||||||||||||||| Sbjct: 599 aacgcatggaattctcttcc 580
>emb|CR860795.1| Pongo pygmaeus mRNA; cDNA DKFZp459O216 (from clone DKFZp459O216) Length = 3942 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 241 aacgcatggaattctcttcc 260 |||||||||||||||||||| Sbjct: 636 aacgcatggaattctcttcc 617
>emb|CR860532.1| Pongo pygmaeus mRNA; cDNA DKFZp459K227 (from clone DKFZp459K227) Length = 3903 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 241 aacgcatggaattctcttcc 260 |||||||||||||||||||| Sbjct: 603 aacgcatggaattctcttcc 584
>emb|CR858906.1| Pongo pygmaeus mRNA; cDNA DKFZp459N1729 (from clone DKFZp459N1729) Length = 3913 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 241 aacgcatggaattctcttcc 260 |||||||||||||||||||| Sbjct: 613 aacgcatggaattctcttcc 594
>emb|CR614713.1| full-length cDNA clone CS0DM004YH12 of Fetal liver of Homo sapiens (human) Length = 2121 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 493 taggaggaggaggactccct 512 |||||||||||||||||||| Sbjct: 258 taggaggaggaggactccct 277
>gb|AC091976.2| Homo sapiens chromosome 5 clone RP11-528F16, complete sequence Length = 175529 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 158 caagaaaataaagaaaaaat 177 |||||||||||||||||||| Sbjct: 46210 caagaaaataaagaaaaaat 46191
>gb|AC008428.5| Homo sapiens chromosome 5 clone CTC-308D9, complete sequence Length = 148069 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 158 caagaaaataaagaaaaaat 177 |||||||||||||||||||| Sbjct: 6620 caagaaaataaagaaaaaat 6639
>gb|BC110179.1| Bos taurus cDNA clone MGC:133838 IMAGE:8059306, complete cds Length = 1475 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 155 gttcaagaaaataaagaaaaaatc 178 |||||||||| ||||||||||||| Sbjct: 610 gttcaagaaattaaagaaaaaatc 633
>gb|AC024022.6| Homo sapiens BAC clone RP11-63A11 from 4, complete sequence Length = 186755 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 245 catggaattctcttccttgg 264 |||||||||||||||||||| Sbjct: 176461 catggaattctcttccttgg 176442
>gb|AC116984.2| Dictyostelium discoideum chromosome 2 map 2567470-3108875 strain AX4, complete sequence Length = 541399 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 154 ggttcaagaaaataaagaaa 173 |||||||||||||||||||| Sbjct: 311782 ggttcaagaaaataaagaaa 311801
>emb|BX641004.1|HSM807168 Homo sapiens mRNA; cDNA DKFZp686D02116 (from clone DKFZp686D02116) Length = 3272 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 493 taggaggaggaggactccct 512 |||||||||||||||||||| Sbjct: 309 taggaggaggaggactccct 328
>emb|BX294670.6| Zebrafish DNA sequence from clone CH211-154O6 in linkage group 16, complete sequence Length = 199070 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 163 aaataaagaaaaaatctggt 182 |||||||||||||||||||| Sbjct: 58106 aaataaagaaaaaatctggt 58087
>emb|CR391947.13| Zebrafish DNA sequence from clone DKEYP-88A4 in linkage group 1, complete sequence Length = 167207 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 172 aaaaatctggtacaattgcatgct 195 ||||||||||||||||| |||||| Sbjct: 144049 aaaaatctggtacaatttcatgct 144026
>gb|AE016877.1| Bacillus cereus ATCC 14579, complete genome Length = 5411809 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 158 caagaaaataaagaaaaaat 177 |||||||||||||||||||| Sbjct: 1570554 caagaaaataaagaaaaaat 1570573
>gb|AE016879.1| Bacillus anthracis str. Ames, complete genome Length = 5227293 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 158 caagaaaataaagaaaaaat 177 |||||||||||||||||||| Sbjct: 1553062 caagaaaataaagaaaaaat 1553081
>gb|AE017194.1| Bacillus cereus ATCC 10987, complete genome Length = 5224283 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 158 caagaaaataaagaaaaaat 177 |||||||||||||||||||| Sbjct: 1678918 caagaaaataaagaaaaaat 1678937
>emb|AL772403.11| Mouse DNA sequence from clone RP23-458E2 on chromosome 4, complete sequence Length = 108612 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 158 caagaaaataaagaaaaaat 177 |||||||||||||||||||| Sbjct: 73584 caagaaaataaagaaaaaat 73603
>dbj|AP004484.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT06I17, TM0017, complete sequence Length = 121127 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 160 agaaaataaagaaaaaatct 179 |||||||||||||||||||| Sbjct: 27022 agaaaataaagaaaaaatct 27041
>emb|AL928801.6| Mouse DNA sequence from clone RP23-116P4 on chromosome 2, complete sequence Length = 132674 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 278 atatatgatagacacaattt 297 |||||||||||||||||||| Sbjct: 79993 atatatgatagacacaattt 80012
>emb|AL832279.1|HSM803586 Homo sapiens mRNA; cDNA DKFZp667E0418 (from clone DKFZp667E0418) Length = 3075 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 493 taggaggaggaggactccct 512 |||||||||||||||||||| Sbjct: 1148 taggaggaggaggactccct 1167
>gb|M74002.1|HUMARGNP Human arginine-rich nuclear protein mRNA, complete cds Length = 2736 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 493 taggaggaggaggactccct 512 |||||||||||||||||||| Sbjct: 848 taggaggaggaggactccct 867
>gb|M33757.1|NEMG12 A.lumbricoides trans-spliced mRNA encoded protein gene 12, complete cds Length = 3620 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 261 ttggcacagttatgcacata 280 |||||||||||||||||||| Sbjct: 99 ttggcacagttatgcacata 80 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,017,556 Number of Sequences: 3902068 Number of extensions: 6017556 Number of successful extensions: 147940 Number of sequences better than 10.0: 83 Number of HSP's better than 10.0 without gapping: 84 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 147396 Number of HSP's gapped (non-prelim): 544 length of query: 529 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 506 effective length of database: 17,143,297,704 effective search space: 8674508638224 effective search space used: 8674508638224 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)