Clone Name | rbah61n15 |
---|---|
Clone Library Name | barley_pub |
>PPAF_ARATH (Q38924) Iron(III)-zinc(II) purple acid phosphatase precursor (EC| 3.1.3.2) (PAP) Length = 469 Score = 53.5 bits (127), Expect = 3e-07 Identities = 28/59 (47%), Positives = 34/59 (57%) Frame = -1 Query: 486 NRKGLASKFIKDHKSAPLSLFREASFGHGRLRIVNETTAVWRWHRNDDKFATVADEVWL 310 N +GL + ++ S FREASFGHG L I N T A + W+RN D A AD VWL Sbjct: 397 NSEGLLTDMMQPQPK--YSAFREASFGHGLLEIKNRTHAYFSWNRNQDGNAVAADSVWL 453
>PPAF_PHAVU (P80366) Iron(III)-zinc(II) purple acid phosphatase (EC 3.1.3.2)| (PAP) Length = 432 Score = 48.9 bits (115), Expect = 7e-06 Identities = 23/40 (57%), Positives = 25/40 (62%) Frame = -1 Query: 432 SLFREASFGHGRLRIVNETTAVWRWHRNDDKFATVADEVW 313 S FREASFGHG I N T A + W+RN D A AD VW Sbjct: 380 SAFREASFGHGMFDIKNRTHAHFSWNRNQDGVAVEADSVW 419
>PPAF_SOYBN (Q09131) Purple acid phosphatase precursor (EC 3.1.3.2)| (Manganese(II) purple acid phosphatase) Length = 464 Score = 48.5 bits (114), Expect = 9e-06 Identities = 22/40 (55%), Positives = 24/40 (60%) Frame = -1 Query: 432 SLFREASFGHGRLRIVNETTAVWRWHRNDDKFATVADEVW 313 S FREASFGH I N T A + WHRN D A AD +W Sbjct: 407 SAFREASFGHAIFDITNRTHAHYSWHRNQDGVAVEADSLW 446
>WDR17_HUMAN (Q8IZU2) WD-repeat protein 17| Length = 1322 Score = 31.2 bits (69), Expect = 1.5 Identities = 18/52 (34%), Positives = 30/52 (57%), Gaps = 1/52 (1%) Frame = +1 Query: 235 RVVAPCNSSVQRPA-LGWCLWSSQALQPDLVGHGGELVVVTVPPPDGGCLVY 387 +V+A +S+ PA L WC W+++ + V H G L + T+ PD G +V+ Sbjct: 117 KVIAKLDSTKGIPASLSWC-WNAEDVVA-FVSHRGPLFIWTISGPDSGVIVH 166
>DPOLA_RAT (O89042) DNA polymerase alpha catalytic subunit (EC 2.7.7.7)| (Fragment) Length = 1451 Score = 30.4 bits (67), Expect = 2.6 Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 5/49 (10%) Frame = +1 Query: 235 RVVAPCNSSVQRPAL-----GWCLWSSQALQPDLVGHGGELVVVTVPPP 366 ++ PC V+ P L WC + + AL+PDLV V+ V PP Sbjct: 499 KIKGPCWLEVKNPQLLNQPISWCKFEAMALKPDLVN-----VIKDVSPP 542
>V70K_EPMV (P20129) 70 kDa protein| Length = 649 Score = 30.0 bits (66), Expect = 3.4 Identities = 22/71 (30%), Positives = 32/71 (45%) Frame = -3 Query: 304 LGYSKDTNPAPVVAQMSCRVPPLDPRWLNCNLSELDGSLLSLPNN*KKSPCVPTEEKITH 125 LG+SK + A + C+ PP P L LL LP K+P PT ++ Sbjct: 364 LGHSKRVGQS---ADLVCQCPPPPPSML---------PLLLLPRGKVKAPLRPTLASLSF 411 Query: 124 ALNAIYFHMTS 92 + I +H+TS Sbjct: 412 GSHPIPYHVTS 422
>DPOLA_MOUSE (P33609) DNA polymerase alpha catalytic subunit (EC 2.7.7.7)| Length = 1465 Score = 29.3 bits (64), Expect = 5.8 Identities = 17/49 (34%), Positives = 23/49 (46%), Gaps = 5/49 (10%) Frame = +1 Query: 235 RVVAPCNSSVQRPAL-----GWCLWSSQALQPDLVGHGGELVVVTVPPP 366 ++ PC V+ P L WC + AL+PDLV V+ V PP Sbjct: 496 KIKGPCWLEVKNPQLLNQPISWCKFEVMALKPDLVN-----VIKDVSPP 539
>Y3069_YERPE (Q8ZCC3) Hypothetical protein YPO3069/y1412/YP2691 precursor| Length = 486 Score = 28.9 bits (63), Expect = 7.6 Identities = 14/37 (37%), Positives = 19/37 (51%) Frame = +2 Query: 278 WVGVFGVAKLSSQTSSATVANLSSLRCHLQTAVVSFT 388 WVGV G L+ + A +A LS Q ++SFT Sbjct: 159 WVGVLGSILLTMASPQAGMAGLSGTLAGAQQGIISFT 195
>CBPA_CLOCL (P38058) Cellulose-binding protein A precursor| Length = 1848 Score = 28.9 bits (63), Expect = 7.6 Identities = 16/56 (28%), Positives = 28/56 (50%), Gaps = 1/56 (1%) Frame = +1 Query: 295 SSQALQPDLVGH-GGELVVVTVPPPDGGCLVYNPQSPVSEARLTEQGKRRRLVILD 459 S+ + P + G+ GG V+ T P PD + NP S + +T+Q + + L+ Sbjct: 167 STPVVNPKVTGYIGGAKVLGTAPGPDVPSSIINPTSATFDKNVTKQADVKTTMTLN 222
>YHCM_ECOLI (P64612) Hypothetical protein yhcM| Length = 375 Score = 28.9 bits (63), Expect = 7.6 Identities = 16/55 (29%), Positives = 25/55 (45%) Frame = +2 Query: 230 WIEWWHPATHLCNDRRWVGVFGVAKLSSQTSSATVANLSSLRCHLQTAVVSFTIL 394 W+ H T D+ W+ + G + +S T L+++ QT VSFT L Sbjct: 224 WLSPLHDETRAQMDKLWLALAGGKRENSPTLEINHRPLATMGVENQTLAVSFTTL 278
>YHCM_ECO57 (P64613) Hypothetical protein yhcM| Length = 375 Score = 28.9 bits (63), Expect = 7.6 Identities = 16/55 (29%), Positives = 25/55 (45%) Frame = +2 Query: 230 WIEWWHPATHLCNDRRWVGVFGVAKLSSQTSSATVANLSSLRCHLQTAVVSFTIL 394 W+ H T D+ W+ + G + +S T L+++ QT VSFT L Sbjct: 224 WLSPLHDETRAQMDKLWLALAGGKRENSPTLEINHRPLATMGVENQTLAVSFTTL 278
>DPOLA_HUMAN (P09884) DNA polymerase alpha catalytic subunit (EC 2.7.7.7)| Length = 1462 Score = 28.5 bits (62), Expect = 9.9 Identities = 17/49 (34%), Positives = 23/49 (46%), Gaps = 5/49 (10%) Frame = +1 Query: 235 RVVAPCNSSVQRPAL-----GWCLWSSQALQPDLVGHGGELVVVTVPPP 366 ++ PC V+ P L WC + AL+PDLV V+ V PP Sbjct: 492 KIKGPCWLEVKSPQLLNQPVSWCKVEAMALKPDLVN-----VIKDVSPP 535 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 66,939,850 Number of Sequences: 219361 Number of extensions: 1307364 Number of successful extensions: 3620 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 3555 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3620 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3362826254 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)