Clone Name	rbah61n15
Clone Library Name	barley_pub

---

No.	Definition	Score (bits)	E Value
1	gb|AY642926.1| Hordeum vulgare BAC CC24_14, complete sequence	170	3e-39
2	dbj|AK073222.1| Oryza sativa (japonica cultivar-group) cDNA clon...	135	1e-28
3	gb|AC116949.11| Oryza sativa (japonica cultivar-group) chromosom...	119	9e-24
4	dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D...	119	9e-24
5	gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome...	119	9e-24
6	gb|K02637.1|BLYAMYABD Hordeum vulgare alpha-amylase type B isozy...	80	8e-12
7	gb|AY137516.1| Hordeum vulgare subsp. vulgare hypersensitive-ind...	58	3e-05
8	ref|XM_472396.1| Oryza sativa (japonica cultivar-group), predic...	54	4e-04
9	emb|AL662947.3|OSJN00148 Oryza sativa genomic DNA, chromosome 4,...	54	4e-04
10	dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D...	54	4e-04
11	dbj|AK121649.1| Oryza sativa (japonica cultivar-group) cDNA clon...	54	4e-04
12	emb|X52103.1|TAEMG T.aestivum Em gene	50	0.007
13	gb|AY121655.1| Drosophila melanogaster RE04029 full insert cDNA	44	0.42
14	ref|NM_141274.1| Drosophila melanogaster CG2669-RA (CG2669), mRNA	44	0.42
15	gb|AC007575.10| Drosophila melanogaster, chromosome 3R, region 8...	44	0.42
16	gb|AC008190.7|AC008190 Drosophila melanogaster, chromosome 3R, r...	44	0.42
17	gb|AE003603.4| Drosophila melanogaster chromosome 3R, section 5 ...	44	0.42
18	gb|AC123645.7| Mus musculus chromosome 15, clone RP23-99N19, com...	42	1.7
19	gb|AC115742.13| Mus musculus chromosome 7, clone RP23-477E13, co...	42	1.7
20	gb|AC125340.3| Mus musculus BAC clone RP24-364H15 from chromosom...	42	1.7
21	gb|AC102611.10| Mus musculus chromosome 1, clone RP23-416O18, co...	40	6.6
22	gb|AC024746.1| Caenorhabditis elegans cosmid Y110A2AL, complete ...	40	6.6
23	ref|XM_673291.1| Plasmodium berghei strain ANKA hypothetical pro...	40	6.6
24	emb|CR382283.8| Zebrafish DNA sequence from clone DKEYP-32G11 in...	40	6.6
25	emb|BX571680.7| Zebrafish DNA sequence from clone DKEY-30L20 in ...	40	6.6
26	emb|BX530085.3| Zebrafish DNA sequence from clone DKEY-18A21 in ...	40	6.6
27	emb|BX677663.6| Zebrafish DNA sequence from clone DKEY-76N12 in ...	40	6.6
28	emb|BX248329.10| Zebrafish DNA sequence from clone CH211-206P14,...	40	6.6
29	gb|AC153362.4| Mus musculus BAC clone RP23-92N20 from chromosome...	40	6.6
30	dbj|AK035333.1| Mus musculus adult male urinary bladder cDNA, RI...	40	6.6
31	dbj|AK034590.1| Mus musculus 12 days embryo embryonic body betwe...	40	6.6
32	ref|NM_182232.2| Caenorhabditis elegans Y110A2AL.4b (Y110A2AL.4)...	40	6.6
33	ref|NM_061979.3| Caenorhabditis elegans Y110A2AL.4a (Y110A2AL.4)...	40	6.6
34	gb|AF474982.1| Hordeum vulgare clone BAC 011009, complete sequence	40	6.6
35	emb|AL928817.5| Zebrafish DNA sequence from clone CH211-244H4 in...	40	6.6
36	emb|CR847788.7| Zebrafish DNA sequence from clone CH211-249H16 i...	40	6.6
37	emb|CR318601.8| Zebrafish DNA sequence from clone CH211-274E20 i...	40	6.6
38	emb|AL807829.21| Zebrafish DNA sequence from clone CH211-246M4 i...	40	6.6
39	gb|AC116724.13| Mus musculus chromosome 15, clone RP23-267E9, co...	40	6.6
40	gb|AC104747.23| Mus musculus chromosome 1, clone RP23-248N10, co...	40	6.6
41	emb|BX088719.6| Zebrafish DNA sequence from clone CH211-207H2 in...	40	6.6
42	gb|AC144783.4| Mus musculus BAC clone RP23-57A16 from 10, comple...	40	6.6
43	emb|AL805969.13| Mouse DNA sequence from clone RP23-40L1 on chro...	40	6.6
44	gb|L10083.1|SSACAPPRO Satellite St. Augustine decline virus caps...	40	6.6

---

>gb|AY642926.1| Hordeum vulgare BAC CC24_14, complete sequence
          Length = 184425

 Score =  170 bits (86), Expect = 3e-39
 Identities = 125/138 (90%)
 Strand = Plus / Plus

                                                                          
Query: 23     ccgagtgactgtatattcaaatgtgttttcattgtgtgagcactaaagccatcgtcggca 82
              |||||||| |||| ||||||| | |||||  ||||||||||||| | |||||||||| ||
Sbjct: 143889 ccgagtgattgtacattcaaacgcgtttttgttgtgtgagcactgaggccatcgtcgaca 143948

                                                                          
Query: 83     acacaaatgtgatgtcatgtgaaaatatattgcgttcaaagcgtgtgttattttctcttc 142
              ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 143949 acacaaatgtgatgtcatgtgaaaatatattacgttcaaagcgtgtgttattttctcttc 144008

                                
Query: 143    cgttggaacgcacgggct 160
              | ||| ||| ||||||||
Sbjct: 144009 cattgcaacacacgggct 144026

---

>dbj|AK073222.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033024D09, full
            insert sequence
          Length = 1769

 Score =  135 bits (68), Expect = 1e-28
 Identities = 158/188 (84%)
 Strand = Plus / Minus

                                                                        
Query: 299  gccaagctctccagccagacctcgtcggccacggtggcgaacttgtcgtcgttacggtgc 358
            |||||||| | ||||||||||||||||   ||||||||||||| ||||||||| ||||||
Sbjct: 1436 gccaagctgtgcagccagacctcgtcgcggacggtggcgaactggtcgtcgttgcggtgc 1377

                                                                        
Query: 359  cacctccagacggcggttgtctcgtttacaatcctcagtcgcccgtgtccgaagctcgcc 418
            ||| ||||||||||| | |||||||| |  | |||||| |||||||| ||||||||||||
Sbjct: 1376 cacgtccagacggcgctcgtctcgttcaggaccctcagccgcccgtgcccgaagctcgcc 1317

                                                                        
Query: 419  tcacggaacaaggaaagcggcgccgacttgtgatccttgatgaatttggaagcaaggcct 478
            || | ||||   || ||  |||||||||||||  |||||||||| |||  ||||||||||
Sbjct: 1316 tccctgaactccgacaggtgcgccgacttgtgccccttgatgaacttgagagcaaggcct 1257

                    
Query: 479  ttcctgtt 486
            | ||||||
Sbjct: 1256 tccctgtt 1249

---

>gb|AC116949.11| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0040B10 map R2918, complete sequence
          Length = 149132

 Score =  119 bits (60), Expect = 9e-24
 Identities = 138/164 (84%)
 Strand = Plus / Plus

                                                                         
Query: 299   gccaagctctccagccagacctcgtcggccacggtggcgaacttgtcgtcgttacggtgc 358
             |||||||| | ||||||||||||||||   ||||||||||||| ||||||||| ||||||
Sbjct: 58876 gccaagctgtgcagccagacctcgtcgcggacggtggcgaactggtcgtcgttgcggtgc 58935

                                                                         
Query: 359   cacctccagacggcggttgtctcgtttacaatcctcagtcgcccgtgtccgaagctcgcc 418
             ||| ||||||||||| | |||||||| |  | |||||| |||||||| ||||||||||||
Sbjct: 58936 cacgtccagacggcgctcgtctcgttcaggaccctcagccgcccgtgcccgaagctcgcc 58995

                                                         
Query: 419   tcacggaacaaggaaagcggcgccgacttgtgatccttgatgaa 462
             || | ||||   || ||  |||||||||||||  ||||||||||
Sbjct: 58996 tccctgaactccgacaggtgcgccgacttgtgccccttgatgaa 59039



 Score = 40.1 bits (20), Expect = 6.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 400   cccgtgtccgaagctcgcctcacggaac 427
             |||||| |||||||||||||| ||||||
Sbjct: 71581 cccgtgcccgaagctcgcctcccggaac 71554

---

>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score =  119 bits (60), Expect = 9e-24
 Identities = 138/164 (84%)
 Strand = Plus / Plus

                                                                           
Query: 299     gccaagctctccagccagacctcgtcggccacggtggcgaacttgtcgtcgttacggtgc 358
               |||||||| | ||||||||||||||||   ||||||||||||| ||||||||| ||||||
Sbjct: 2406779 gccaagctgtgcagccagacctcgtcgcggacggtggcgaactggtcgtcgttgcggtgc 2406838

                                                                           
Query: 359     cacctccagacggcggttgtctcgtttacaatcctcagtcgcccgtgtccgaagctcgcc 418
               ||| ||||||||||| | |||||||| |  | |||||| |||||||| ||||||||||||
Sbjct: 2406839 cacgtccagacggcgctcgtctcgttcaggaccctcagccgcccgtgcccgaagctcgcc 2406898

                                                           
Query: 419     tcacggaacaaggaaagcggcgccgacttgtgatccttgatgaa 462
               || | ||||   || ||  |||||||||||||  ||||||||||
Sbjct: 2406899 tccctgaactccgacaggtgcgccgacttgtgccccttgatgaa 2406942



 Score = 40.1 bits (20), Expect = 6.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                           
Query: 400     cccgtgtccgaagctcgcctcacggaac 427
               |||||| |||||||||||||| ||||||
Sbjct: 2419484 cccgtgcccgaagctcgcctcccggaac 2419457

---

>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score =  119 bits (60), Expect = 9e-24
 Identities = 138/164 (84%)
 Strand = Plus / Plus

                                                                           
Query: 299     gccaagctctccagccagacctcgtcggccacggtggcgaacttgtcgtcgttacggtgc 358
               |||||||| | ||||||||||||||||   ||||||||||||| ||||||||| ||||||
Sbjct: 2414515 gccaagctgtgcagccagacctcgtcgcggacggtggcgaactggtcgtcgttgcggtgc 2414574

                                                                           
Query: 359     cacctccagacggcggttgtctcgtttacaatcctcagtcgcccgtgtccgaagctcgcc 418
               ||| ||||||||||| | |||||||| |  | |||||| |||||||| ||||||||||||
Sbjct: 2414575 cacgtccagacggcgctcgtctcgttcaggaccctcagccgcccgtgcccgaagctcgcc 2414634

                                                           
Query: 419     tcacggaacaaggaaagcggcgccgacttgtgatccttgatgaa 462
               || | ||||   || ||  |||||||||||||  ||||||||||
Sbjct: 2414635 tccctgaactccgacaggtgcgccgacttgtgccccttgatgaa 2414678



 Score = 40.1 bits (20), Expect = 6.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                           
Query: 400     cccgtgtccgaagctcgcctcacggaac 427
               |||||| |||||||||||||| ||||||
Sbjct: 2427220 cccgtgcccgaagctcgcctcccggaac 2427193

---

>gb|K02637.1|BLYAMYABD Hordeum vulgare alpha-amylase type B isozyme (Amy6-4) gene,
           complete cds
          Length = 2910

 Score = 79.8 bits (40), Expect = 8e-12
 Identities = 49/52 (94%)
 Strand = Plus / Plus

                                                               
Query: 107 atatattgcgttcaaagcgtgtgttattttctcttccgttggaacgcacggg 158
           ||||||| |||||||||||||||||||||||||||| |||| ||||||||||
Sbjct: 1   atatattacgttcaaagcgtgtgttattttctcttctgttgcaacgcacggg 52

---

>gb|AY137516.1| Hordeum vulgare subsp. vulgare hypersensitive-induced reaction
           protein 2 (hir2) gene, complete cds
          Length = 5125

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 38/41 (92%)
 Strand = Plus / Minus

                                                    
Query: 120 aaagcgtgtgttattttctcttccgttggaacgcacgggct 160
           |||||||||| |||||| |||||||||| ||||||||||||
Sbjct: 630 aaagcgtgtggtattttttcttccgttgcaacgcacgggct 590

---

>ref|XM_472396.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1359

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 99/123 (80%)
 Strand = Plus / Minus

                                                                        
Query: 298  agccaagctctccagccagacctcgtcggccacggtggcgaacttgtcgtcgttacggtg 357
            ||||| |||||||||||||| |||||||  |||||||| |     ||||||||| |||||
Sbjct: 1290 agccaggctctccagccagatctcgtcgcgcacggtggagtcggcgtcgtcgttgcggtg 1231

                                                                        
Query: 358  ccacctccagacggcggttgtctcgtttacaatcctcagtcgcccgtgtccgaagctcgc 417
            |||| |||||   ||||  ||| |||| || |  ||||| |||||||| |||||||||||
Sbjct: 1230 ccacgtccagcgcgcggcggtcgcgttcaccacgctcagccgcccgtgcccgaagctcgc 1171

               
Query: 418  ctc 420
            |||
Sbjct: 1170 ctc 1168

---

>emb|AL662947.3|OSJN00148 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0073L04,
             complete sequence
          Length = 143301

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 99/123 (80%)
 Strand = Plus / Plus

                                                                         
Query: 298   agccaagctctccagccagacctcgtcggccacggtggcgaacttgtcgtcgttacggtg 357
             ||||| |||||||||||||| |||||||  |||||||| |     ||||||||| |||||
Sbjct: 23436 agccaggctctccagccagatctcgtcgcgcacggtggagtcggcgtcgtcgttgcggtg 23495

                                                                         
Query: 358   ccacctccagacggcggttgtctcgtttacaatcctcagtcgcccgtgtccgaagctcgc 417
             |||| |||||   ||||  ||| |||| || |  ||||| |||||||| |||||||||||
Sbjct: 23496 ccacgtccagcgcgcggcggtcgcgttcaccacgctcagccgcccgtgcccgaagctcgc 23555

                
Query: 418   ctc 420
             |||
Sbjct: 23556 ctc 23558

---

>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 99/123 (80%)
 Strand = Plus / Plus

                                                                            
Query: 298      agccaagctctccagccagacctcgtcggccacggtggcgaacttgtcgtcgttacggtg 357
                ||||| |||||||||||||| |||||||  |||||||| |     ||||||||| |||||
Sbjct: 20292803 agccaggctctccagccagatctcgtcgcgcacggtggagtcggcgtcgtcgttgcggtg 20292862

                                                                            
Query: 358      ccacctccagacggcggttgtctcgtttacaatcctcagtcgcccgtgtccgaagctcgc 417
                |||| |||||   ||||  ||| |||| || |  ||||| |||||||| |||||||||||
Sbjct: 20292863 ccacgtccagcgcgcggcggtcgcgttcaccacgctcagccgcccgtgcccgaagctcgc 20292922

                   
Query: 418      ctc 420
                |||
Sbjct: 20292923 ctc 20292925

---

>dbj|AK121649.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033060H09, full
            insert sequence
          Length = 1643

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 99/123 (80%)
 Strand = Plus / Minus

                                                                        
Query: 298  agccaagctctccagccagacctcgtcggccacggtggcgaacttgtcgtcgttacggtg 357
            ||||| |||||||||||||| |||||||  |||||||| |     ||||||||| |||||
Sbjct: 1347 agccaggctctccagccagatctcgtcgcgcacggtggagtcggcgtcgtcgttgcggtg 1288

                                                                        
Query: 358  ccacctccagacggcggttgtctcgtttacaatcctcagtcgcccgtgtccgaagctcgc 417
            |||| |||||   ||||  ||| |||| || |  ||||| |||||||| |||||||||||
Sbjct: 1287 ccacgtccagcgcgcggcggtcgcgttcaccacgctcagccgcccgtgcccgaagctcgc 1228

               
Query: 418  ctc 420
            |||
Sbjct: 1227 ctc 1225

---

>emb|X52103.1|TAEMG T.aestivum Em gene
          Length = 2465

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 81  caacacaaatgtgatgtcatgtgaaaata 109
           |||||||||||||||| ||||||||||||
Sbjct: 195 caacacaaatgtgatgccatgtgaaaata 167

---

>gb|AY121655.1| Drosophila melanogaster RE04029 full insert cDNA
          Length = 1940

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 300  ccaagctctccagccagacctcgtcg 325
            ||||||||||||||||| ||||||||
Sbjct: 1218 ccaagctctccagccagtcctcgtcg 1193

---

>ref|NM_141274.1| Drosophila melanogaster CG2669-RA (CG2669), mRNA
          Length = 1925

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 300  ccaagctctccagccagacctcgtcg 325
            ||||||||||||||||| ||||||||
Sbjct: 1218 ccaagctctccagccagtcctcgtcg 1193

---

>gb|AC007575.10| Drosophila melanogaster, chromosome 3R, region 82F-83A, BAC clone
              BACR42H10, complete sequence
          Length = 181009

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 300    ccaagctctccagccagacctcgtcg 325
              ||||||||||||||||| ||||||||
Sbjct: 107077 ccaagctctccagccagtcctcgtcg 107102

---

>gb|AC008190.7|AC008190 Drosophila melanogaster, chromosome 3R, region 83A-83A, BAC clone
            BACR34M23, complete sequence
          Length = 158012

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 300  ccaagctctccagccagacctcgtcg 325
            ||||||||||||||||| ||||||||
Sbjct: 1645 ccaagctctccagccagtcctcgtcg 1670

---

>gb|AE003603.4| Drosophila melanogaster chromosome 3R, section 5 of 118 of the complete
              sequence
          Length = 265289

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 300    ccaagctctccagccagacctcgtcg 325
              ||||||||||||||||| ||||||||
Sbjct: 227917 ccaagctctccagccagtcctcgtcg 227942

---

>gb|AC123645.7| Mus musculus chromosome 15, clone RP23-99N19, complete sequence
          Length = 192973

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 41    aaatgtgttttcattgtgtga 61
             |||||||||||||||||||||
Sbjct: 96193 aaatgtgttttcattgtgtga 96173



 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 35   atattcaaatgtgttttcat 54
            ||||||||||||||||||||
Sbjct: 8662 atattcaaatgtgttttcat 8681

---

>gb|AC115742.13| Mus musculus chromosome 7, clone RP23-477E13, complete sequence
          Length = 186195

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 26    agtgactgtatattcaaatgt 46
             |||||||||||||||||||||
Sbjct: 59222 agtgactgtatattcaaatgt 59242

---

>gb|AC125340.3| Mus musculus BAC clone RP24-364H15 from chromosome 1, complete sequence
          Length = 177161

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 454   cttgatgaatttggaagcaag 474
             |||||||||||||||||||||
Sbjct: 30510 cttgatgaatttggaagcaag 30530

---

>gb|AC102611.10| Mus musculus chromosome 1, clone RP23-416O18, complete sequence
          Length = 210808

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 126   tgtgttattttctcttccgt 145
             ||||||||||||||||||||
Sbjct: 72591 tgtgttattttctcttccgt 72572

---

>gb|AC024746.1| Caenorhabditis elegans cosmid Y110A2AL, complete sequence
          Length = 59320

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 442  cgacttgtgatccttgatgaattt 465
            |||||||||| |||||||||||||
Sbjct: 3281 cgacttgtgagccttgatgaattt 3258

---

>ref|XM_673291.1| Plasmodium berghei strain ANKA hypothetical protein (PB000730.01.0)
            partial mRNA
          Length = 1338

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 134  tttctcttccgttggaacgc 153
            ||||||||||||||||||||
Sbjct: 1320 tttctcttccgttggaacgc 1301

---

>emb|CR382283.8| Zebrafish DNA sequence from clone DKEYP-32G11 in linkage group 7,
             complete sequence
          Length = 145013

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 104   aaaatatattgcgttcaaag 123
             ||||||||||||||||||||
Sbjct: 25594 aaaatatattgcgttcaaag 25613

---

>emb|BX571680.7| Zebrafish DNA sequence from clone DKEY-30L20 in linkage group 7,
             complete sequence
          Length = 145338

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 104   aaaatatattgcgttcaaag 123
             ||||||||||||||||||||
Sbjct: 39773 aaaatatattgcgttcaaag 39792

---

>emb|BX530085.3| Zebrafish DNA sequence from clone DKEY-18A21 in linkage group 14,
             complete sequence
          Length = 227326

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 104   aaaatatattgcgttcaaag 123
             ||||||||||||||||||||
Sbjct: 21955 aaaatatattgcgttcaaag 21974

---

>emb|BX677663.6| Zebrafish DNA sequence from clone DKEY-76N12 in linkage group 2, complete
              sequence
          Length = 143503

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 104    aaaatatattgcgttcaaag 123
              ||||||||||||||||||||
Sbjct: 125804 aaaatatattgcgttcaaag 125823

---

>emb|BX248329.10| Zebrafish DNA sequence from clone CH211-206P14, complete sequence
          Length = 151789

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 80    gcaacacaaatgtgatgtca 99
             ||||||||||||||||||||
Sbjct: 72714 gcaacacaaatgtgatgtca 72733

---

>gb|AC153362.4| Mus musculus BAC clone RP23-92N20 from chromosome 10, complete sequence
          Length = 214898

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 42    aatgtgttttcattgtgtga 61
             ||||||||||||||||||||
Sbjct: 29429 aatgtgttttcattgtgtga 29448

---

>dbj|AK035333.1| Mus musculus adult male urinary bladder cDNA, RIKEN full-length
            enriched library, clone:9530018I21 product:polydomain
            protein, full insert sequence
          Length = 3242

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 38   ttcaaatgtgttttcattgtgtga 61
            ||||| ||||||||||||||||||
Sbjct: 2973 ttcaactgtgttttcattgtgtga 2950

---

>dbj|AK034590.1| Mus musculus 12 days embryo embryonic body between diaphragm region
           and neck cDNA, RIKEN full-length enriched library,
           clone:9430012B12 product:unclassifiable, full insert
           sequence
          Length = 2085

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 42  aatgtgttttcattgtgtga 61
           ||||||||||||||||||||
Sbjct: 423 aatgtgttttcattgtgtga 404

---

>ref|NM_182232.2| Caenorhabditis elegans Y110A2AL.4b (Y110A2AL.4) mRNA, complete cds
          Length = 537

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 442 cgacttgtgatccttgatgaattt 465
           |||||||||| |||||||||||||
Sbjct: 207 cgacttgtgagccttgatgaattt 184

---

>ref|NM_061979.3| Caenorhabditis elegans Y110A2AL.4a (Y110A2AL.4) mRNA, complete cds
          Length = 910

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 442 cgacttgtgatccttgatgaattt 465
           |||||||||| |||||||||||||
Sbjct: 379 cgacttgtgagccttgatgaattt 356

---

>gb|AF474982.1| Hordeum vulgare clone BAC 011009, complete sequence
          Length = 77136

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                    
Query: 120  aaagcgtgtgttattttctcttccgttggaacgcacgggc 159
            |||||||||| | |||| ||| |||||| |||||||||||
Sbjct: 1921 aaagcgtgtggttttttttctaccgttgcaacgcacgggc 1882

---

>emb|AL928817.5| Zebrafish DNA sequence from clone CH211-244H4 in linkage group 22,
             complete sequence
          Length = 153594

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 87    aaatgtgatgtcatgtgaaa 106
             ||||||||||||||||||||
Sbjct: 39384 aaatgtgatgtcatgtgaaa 39403

---

>emb|CR847788.7| Zebrafish DNA sequence from clone CH211-249H16 in linkage group 10,
             complete sequence
          Length = 176964

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 104   aaaatatattgcgttcaaag 123
             ||||||||||||||||||||
Sbjct: 59244 aaaatatattgcgttcaaag 59263

---

>emb|CR318601.8| Zebrafish DNA sequence from clone CH211-274E20 in linkage group 7,
              complete sequence
          Length = 165501

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 104    aaaatatattgcgttcaaag 123
              ||||||||||||||||||||
Sbjct: 116260 aaaatatattgcgttcaaag 116279

---

>emb|AL807829.21| Zebrafish DNA sequence from clone CH211-246M4 in linkage group 9,
             complete sequence
          Length = 166114

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 104   aaaatatattgcgttcaaag 123
             ||||||||||||||||||||
Sbjct: 13558 aaaatatattgcgttcaaag 13577

---

>gb|AC116724.13| Mus musculus chromosome 15, clone RP23-267E9, complete sequence
          Length = 136996

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 35    atattcaaatgtgttttcat 54
             ||||||||||||||||||||
Sbjct: 22072 atattcaaatgtgttttcat 22053

---

>gb|AC104747.23| Mus musculus chromosome 1, clone RP23-248N10, complete sequence
          Length = 228588

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 32     tgtatattcaaatgtgttttcatt 55
              ||||| ||||||||||||||||||
Sbjct: 113356 tgtatcttcaaatgtgttttcatt 113333

---

>emb|BX088719.6| Zebrafish DNA sequence from clone CH211-207H2 in linkage group 17,
              complete sequence
          Length = 205685

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 104    aaaatatattgcgttcaaag 123
              ||||||||||||||||||||
Sbjct: 150171 aaaatatattgcgttcaaag 150152

---

>gb|AC144783.4| Mus musculus BAC clone RP23-57A16 from 10, complete sequence
          Length = 246132

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 42     aatgtgttttcattgtgtga 61
              ||||||||||||||||||||
Sbjct: 117325 aatgtgttttcattgtgtga 117306

---

>emb|AL805969.13| Mouse DNA sequence from clone RP23-40L1 on chromosome 4, complete
             sequence
          Length = 252953

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 38    ttcaaatgtgttttcattgtgtga 61
             ||||| ||||||||||||||||||
Sbjct: 64132 ttcaactgtgttttcattgtgtga 64155

---

>gb|L10083.1|SSACAPPRO Satellite St. Augustine decline virus capsid protein gene, complete
           cds
          Length = 824

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 373 ggttgtctcgtttacaatcc 392
           ||||||||||||||||||||
Sbjct: 256 ggttgtctcgtttacaatcc 275


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,827,703
Number of Sequences: 3902068
Number of extensions: 3827703
Number of successful extensions: 72259
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 72108
Number of HSP's gapped (non-prelim): 147
length of query: 486
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 464
effective length of database: 17,147,199,772
effective search space: 7956300694208
effective search space used: 7956300694208
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

---