>NAK_ARATH (P43293) Probable serine/threonine-protein kinase NAK (EC 2.7.11.1)|
          Length = 389

 Score = 36.6 bits (83), Expect = 0.037
 Identities = 19/47 (40%), Positives = 29/47 (61%)
 Frame = -3

Query: 488 KVLGIVDPRLAADDYPVKAVHKTAMLAYHCLSRNPKARPLMRDIVAT 348
           ++L ++DPRL    Y +    K A+LA  C+S + K+RP M +IV T
Sbjct: 304 RLLRVMDPRLQGQ-YSLTRALKIAVLALDCISIDAKSRPTMNEIVKT 349

>CLV1_ARATH (Q9SYQ8) Receptor protein kinase CLAVATA1 precursor (EC 2.7.11.1)|
          Length = 980

 Score = 35.0 bits (79), Expect = 0.11
 Identities = 18/44 (40%), Positives = 25/44 (56%)
 Frame = -3

Query: 485  VLGIVDPRLAADDYPVKAVHKTAMLAYHCLSRNPKARPLMRDIV 354
            V+ IVDPRL    YP+ +V     +A  C+     ARP MR++V
Sbjct: 923  VVAIVDPRLTG--YPLTSVIHVFKIAMMCVEEEAAARPTMREVV 964

>PBS1_ARATH (Q9FE20) Serine/threonine-protein kinase PBS1 (EC 2.7.11.1)|
           (AvrPphB susceptible protein 1)
          Length = 456

 Score = 32.7 bits (73), Expect = 0.53
 Identities = 21/88 (23%), Positives = 33/88 (37%), Gaps = 9/88 (10%)
 Frame = -3

Query: 488 KVLGIVDPRLAADDYPVKAVHKTAMLAYHCLSRNPKARPLMRDIVATXXXXXXXXXXXXX 309
           K + + DPRL    +P +A+++   +A  C+      RPL+ D+V               
Sbjct: 314 KFIKLADPRLKGR-FPTRALYQALAVASMCIQEQAATRPLIADVVTALSYLANQAYDPSK 372

Query: 308 XXXXVS---------PANDSGGGDGVGF 252
                +           ND GGG G  F
Sbjct: 373 DDSRRNRDERGARLITRNDDGGGSGSKF 400

>APK1B_ARATH (P46573) Protein kinase APK1B, chloroplast precursor (EC 2.7.11.1)|
          Length = 412

 Score = 32.0 bits (71), Expect = 0.91
 Identities = 17/46 (36%), Positives = 26/46 (56%)
 Frame = -3

Query: 488 KVLGIVDPRLAADDYPVKAVHKTAMLAYHCLSRNPKARPLMRDIVA 351
           K+  ++D RL  D Y ++   K A LA  CL+   K RP M ++V+
Sbjct: 305 KLFRVIDNRLQ-DQYSMEEACKVATLALRCLTFEIKLRPNMNEVVS 349

>APK1A_ARATH (Q06548) Protein kinase APK1A, chloroplast precursor (EC 2.7.11.1)|
          Length = 410

 Score = 32.0 bits (71), Expect = 0.91
 Identities = 16/46 (34%), Positives = 26/46 (56%)
 Frame = -3

Query: 488 KVLGIVDPRLAADDYPVKAVHKTAMLAYHCLSRNPKARPLMRDIVA 351
           K+  ++D RL  D Y ++   K A L+  CL+   K RP M ++V+
Sbjct: 304 KIFRVIDNRLQ-DQYSMEEACKVATLSLRCLTTEIKLRPNMSEVVS 348

>RLCK7_ARATH (Q9LQQ8) Probable serine/threonine-protein kinase RLCKVII (EC|
           2.7.11.1)
          Length = 423

 Score = 31.2 bits (69), Expect = 1.6
 Identities = 13/41 (31%), Positives = 24/41 (58%)
 Frame = -3

Query: 476 IVDPRLAADDYPVKAVHKTAMLAYHCLSRNPKARPLMRDIV 354
           +VDP L    YPV+ +++   ++  C+   P  RP++ D+V
Sbjct: 335 MVDPLLQGQ-YPVRGLYQALAISAMCVQEQPTMRPVVSDVV 374

>TMK1_ARATH (P43298) Putative receptor protein kinase TMK1 precursor (EC|
           2.7.11.1)
          Length = 942

 Score = 31.2 bits (69), Expect = 1.6
 Identities = 14/36 (38%), Positives = 20/36 (55%)
 Frame = -3

Query: 473 VDPRLAADDYPVKAVHKTAMLAYHCLSRNPKARPLM 366
           +D  +  D+  + +VH  A LA HC +R P  RP M
Sbjct: 823 IDTTIDLDEETLASVHTVAELAGHCCAREPYQRPDM 858

>R1AB_CVPPU (Q9IW06) Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein)|
            [Includes: Replicase polyprotein 1a (pp1a) (ORF1a)]
            [Contains: p9; p87; p195 (EC 3.4.22.-) (Papain-like
            proteinases 1/2) (PL1-PRO/PL2-PRO); Peptide HD2; Unknown
            protein 1; 3C-like
          Length = 6684

 Score = 29.6 bits (65), Expect = 4.5
 Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 6/62 (9%)
 Frame = +3

Query: 114  KRP*ALSADQENTVSR------VAVVYNTIHTSYPYMQKSTYTRQHTNVGSPKTHAVTTT 275
            K P  ++ ++ NT+S+      +A  YNT+   Y  + K  +T      GS K+H V   
Sbjct: 5164 KAPILVNQEKYNTISKLYPVFNIAEAYNTLVPYYQMIGKQKFTTIQGPPGSGKSHCVIGL 5223

Query: 276  GV 281
            G+
Sbjct: 5224 GL 5225


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 61,608,273
Number of Sequences: 219361
Number of extensions: 1068700
Number of successful extensions: 2764
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2675
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2764
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3420806017
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)