Clone Name | rbah61n11 |
---|---|
Clone Library Name | barley_pub |
>EGR2_RAT (P51774) Early growth response protein 2 (EGR-2) (Krox-20 protein)| Length = 470 Score = 32.0 bits (71), Expect = 1.6 Identities = 25/70 (35%), Positives = 32/70 (45%), Gaps = 2/70 (2%) Frame = -3 Query: 377 PVPHXVAPRPC--PGG*SAVPVLDWKGFKDGCSPWAQQQAERTDHRQDKHIGAGPDRAAG 204 P P +P+P PG +P D+ GF SP ++D H AGPDR Sbjct: 204 PPPSYPSPKPAMDPGLIPMIP--DYPGFFP--SPC----------QRDPHGAAGPDRKPF 249 Query: 203 SCPSDSLHLP 174 CP DSL +P Sbjct: 250 PCPLDSLRVP 259
>EGR2_MOUSE (P08152) Early growth response protein 2 (EGR-2) (Krox-20 protein)| Length = 470 Score = 32.0 bits (71), Expect = 1.6 Identities = 25/70 (35%), Positives = 32/70 (45%), Gaps = 2/70 (2%) Frame = -3 Query: 377 PVPHXVAPRPC--PGG*SAVPVLDWKGFKDGCSPWAQQQAERTDHRQDKHIGAGPDRAAG 204 P P +P+P PG +P D+ GF SP ++D H AGPDR Sbjct: 204 PPPSYPSPKPAMDPGLIPMIP--DYPGFFP--SPC----------QRDPHGAAGPDRKPF 249 Query: 203 SCPSDSLHLP 174 CP DSL +P Sbjct: 250 PCPLDSLRVP 259
>ELK1_HUMAN (P19419) ETS domain-containing protein Elk-1| Length = 428 Score = 31.6 bits (70), Expect = 2.1 Identities = 15/33 (45%), Positives = 22/33 (66%) Frame = +3 Query: 471 IAPVLATSASLLPTESWSSTFSPVATMSPKKVT 569 + PVL T +SL P+ + ST SP+A SP K++ Sbjct: 362 LTPVLLTPSSLPPSIHFWSTLSPIAPRSPAKLS 394
>ELK1_MOUSE (P41969) ETS domain-containing protein Elk-1| Length = 429 Score = 31.6 bits (70), Expect = 2.1 Identities = 15/33 (45%), Positives = 22/33 (66%) Frame = +3 Query: 471 IAPVLATSASLLPTESWSSTFSPVATMSPKKVT 569 + PVL T +SL P+ + ST SP+A SP K++ Sbjct: 363 LTPVLLTPSSLPPSIHFWSTLSPIAPRSPAKLS 395
>EGR2_HUMAN (P11161) Early growth response protein 2 (EGR-2) (Krox-20 protein)| (AT591) Length = 476 Score = 30.4 bits (67), Expect = 4.6 Identities = 24/70 (34%), Positives = 31/70 (44%), Gaps = 2/70 (2%) Frame = -3 Query: 377 PVPHXVAPRPC--PGG*SAVPVLDWKGFKDGCSPWAQQQAERTDHRQDKHIGAGPDRAAG 204 P P +P+P PG +P D+ GF Q +R D H AGPDR Sbjct: 204 PPPSYPSPKPATDPGLFPMIP--DYPGF-------FPSQCQR-----DLHGTAGPDRKPF 249 Query: 203 SCPSDSLHLP 174 CP D+L +P Sbjct: 250 PCPLDTLRVP 259
>NCAP_DHVI1 (P11468) Nucleoprotein| Length = 477 Score = 27.3 bits (59), Expect(2) = 4.7 Identities = 19/66 (28%), Positives = 31/66 (46%), Gaps = 8/66 (12%) Frame = -1 Query: 334 NLQSQFSIGRGSKMAVRLGLNNKLSGQITVRTSTSEQVQIAL--------LGLVPVIASI 179 NLQ++ S+G+G K++ R + + T+ T Q Q A+ L V +A Sbjct: 187 NLQTEKSVGKGRKLSPRAAAGIRKRLEATLMRQTIGQSQKAMLRQIFDGKLAYVRTLAHS 246 Query: 178 YRSFRP 161 Y S +P Sbjct: 247 YCSIKP 252 Score = 21.6 bits (44), Expect(2) = 4.7 Identities = 7/21 (33%), Positives = 15/21 (71%) Frame = -2 Query: 438 IWKRA*KTKIIQLASPCQPWA 376 +W+R T+ +Q++ C+P+A Sbjct: 139 LWQRNPVTRELQVSPVCEPFA 159
>GP124_HUMAN (Q96PE1) Probable G-protein coupled receptor 124 precursor (Tumor| endothelial marker 5) Length = 1331 Score = 29.6 bits (65), Expect = 7.9 Identities = 23/67 (34%), Positives = 25/67 (37%), Gaps = 6/67 (8%) Frame = -3 Query: 542 HWAEGRGPALCW------*EAGASGKHRCNAGSGGYRLWSKFGSALKRQRLSNWPVLVNL 381 HWAEG P W EAG C S + SAL Q L N VL+ L Sbjct: 694 HWAEGAEPVAAWWSQEGPGEAGGWTSEGCQLRSSQPNV-----SALHCQHLGNVAVLMEL 748 Query: 380 GPVPHXV 360 P V Sbjct: 749 SAFPREV 755
>GPI16_YEAST (P38875) GPI transamidase component GPI16 precursor| Length = 602 Score = 29.6 bits (65), Expect = 7.9 Identities = 17/52 (32%), Positives = 24/52 (46%) Frame = -3 Query: 539 WAEGRGPALCW*EAGASGKHRCNAGSGGYRLWSKFGSALKRQRLSNWPVLVN 384 + G AL W + +GK AG+ G LWS+ + + Q NW L N Sbjct: 93 FTRGFWDALSWGQLPHAGKE---AGASGVELWSQVQAMDQEQAFHNWKKLSN 141 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 95,028,839 Number of Sequences: 219361 Number of extensions: 2032215 Number of successful extensions: 5302 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 5069 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5298 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 5972710590 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)