Clone Name | rbah61n11 |
---|---|
Clone Library Name | barley_pub |
>gb|AC084218.6| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0001A07, complete sequence Length = 164898 Score = 418 bits (211), Expect = e-114 Identities = 435/510 (85%) Strand = Plus / Plus Query: 134 aagctaataagcaaacgatggttcaccgggccggaagctccggtagatggaggctatcac 193 ||||||||| || || || ||||| | ||||| |||||||| ||| ||||||||| || Sbjct: 108126 aagctaataggcgaaggagggttcgctgggcctgaagctcctgtaaatggaggctgcaac 108185 Query: 194 tgggacaagacccagcagcgcgatctggacctgctccgatgtgcttgtcctgacggtgat 253 ||||| |||||||| |||||||||||||||||||||||| |||||||||||||| ||||| Sbjct: 108186 tgggataagacccaacagcgcgatctggacctgctccgaggtgcttgtcctgacagtgat 108245 Query: 254 ctgtccgctcagcttgttgttgagcccaaggcgaacagccatctttgaaccccttccaat 313 ||| || || || ||||| || | ||||| ||||| ||||||| || ||||||||||| Sbjct: 108246 ctggccacttagtttgttattcaatccaagacgaaccaccatcttcgagccccttccaat 108305 Query: 314 cgagaactgggactgcagattagcccccagggcaaggtcgcggcgccacttnatgaggga 373 ||||||||||||||||| ||| || || || |||||||| ||||||||||| || | || Sbjct: 108306 cgagaactgggactgcaaattcgcaccgagagcaaggtctcggcgccacttcatcaaaga 108365 Query: 374 caggcccaaggttgacaaggactggccaattggataatctttgtcttttaagcgcgcttc 433 || |||| |||||||| |||||||||||| ||||||||||||||||| | ||| || || Sbjct: 108366 aagacccagggttgacagggactggccaatcggataatctttgtctttcaggcgtgcctc 108425 Query: 434 caaatttgctccataggcggtatccccctgagcccgcattgcacctgtgcttgccactag 493 ||| || |||||||| ||||| || || ||||| ||||||||||||||||| ||||| || Sbjct: 108426 caagttagctccataagcggtgtcgccttgagctcgcattgcacctgtgctcgccaccag 108485 Query: 494 cgccagcctcttaccaacagagagctggtcctcgaccttcagcccagtggccacaatgtc 553 |||| |||||| |||| ||||||||||||||| |||||||||||||| ||||||||||| Sbjct: 108486 tgccaacctcttcccaagagagagctggtcctcaaccttcagcccagtcgccacaatgtc 108545 Query: 554 acccaagaaagtaacagagaatcctccagtggttttgttcttcttgatactcttgaattt 613 ||||||||||| || || ||||||||||| || ||||||||||||||| ||||||| || Sbjct: 108546 gcccaagaaagtcactgaaaatcctccagtagtcttgttcttcttgatattcttgaactt 108605 Query: 614 ggtctcaccacggaggatataagcaagctg 643 ||| ||||||||||| || || |||||||| Sbjct: 108606 ggtttcaccacggagaatgtacgcaagctg 108635
>gb|AC093493.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0072C16, complete sequence Length = 159525 Score = 418 bits (211), Expect = e-114 Identities = 435/510 (85%) Strand = Plus / Plus Query: 134 aagctaataagcaaacgatggttcaccgggccggaagctccggtagatggaggctatcac 193 ||||||||| || || || ||||| | ||||| |||||||| ||| ||||||||| || Sbjct: 7531 aagctaataggcgaaggagggttcgctgggcctgaagctcctgtaaatggaggctgcaac 7590 Query: 194 tgggacaagacccagcagcgcgatctggacctgctccgatgtgcttgtcctgacggtgat 253 ||||| |||||||| |||||||||||||||||||||||| |||||||||||||| ||||| Sbjct: 7591 tgggataagacccaacagcgcgatctggacctgctccgaggtgcttgtcctgacagtgat 7650 Query: 254 ctgtccgctcagcttgttgttgagcccaaggcgaacagccatctttgaaccccttccaat 313 ||| || || || ||||| || | ||||| ||||| ||||||| || ||||||||||| Sbjct: 7651 ctggccacttagtttgttattcaatccaagacgaaccaccatcttcgagccccttccaat 7710 Query: 314 cgagaactgggactgcagattagcccccagggcaaggtcgcggcgccacttnatgaggga 373 ||||||||||||||||| ||| || || || |||||||| ||||||||||| || | || Sbjct: 7711 cgagaactgggactgcaaattcgcaccgagagcaaggtctcggcgccacttcatcaaaga 7770 Query: 374 caggcccaaggttgacaaggactggccaattggataatctttgtcttttaagcgcgcttc 433 || |||| |||||||| |||||||||||| ||||||||||||||||| | ||| || || Sbjct: 7771 aagacccagggttgacagggactggccaatcggataatctttgtctttcaggcgtgcctc 7830 Query: 434 caaatttgctccataggcggtatccccctgagcccgcattgcacctgtgcttgccactag 493 ||| || |||||||| ||||| || || ||||| ||||||||||||||||| ||||| || Sbjct: 7831 caagttagctccataagcggtgtcgccttgagctcgcattgcacctgtgctcgccaccag 7890 Query: 494 cgccagcctcttaccaacagagagctggtcctcgaccttcagcccagtggccacaatgtc 553 |||| |||||| |||| ||||||||||||||| |||||||||||||| ||||||||||| Sbjct: 7891 tgccaacctcttcccaagagagagctggtcctcaaccttcagcccagtcgccacaatgtc 7950 Query: 554 acccaagaaagtaacagagaatcctccagtggttttgttcttcttgatactcttgaattt 613 ||||||||||| || || ||||||||||| || ||||||||||||||| ||||||| || Sbjct: 7951 gcccaagaaagtcactgaaaatcctccagtagtcttgttcttcttgatattcttgaactt 8010 Query: 614 ggtctcaccacggaggatataagcaagctg 643 ||| ||||||||||| || || |||||||| Sbjct: 8011 ggtttcaccacggagaatgtacgcaagctg 8040
>dbj|AK061885.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-041-F07, full insert sequence Length = 1993 Score = 418 bits (211), Expect = e-114 Identities = 435/510 (85%) Strand = Plus / Minus Query: 134 aagctaataagcaaacgatggttcaccgggccggaagctccggtagatggaggctatcac 193 ||||||||| || || || ||||| | ||||| |||||||| ||| ||||||||| || Sbjct: 1837 aagctaataggcgaaggagggttcgctgggcctgaagctcctgtaaatggaggctgcaac 1778 Query: 194 tgggacaagacccagcagcgcgatctggacctgctccgatgtgcttgtcctgacggtgat 253 ||||| |||||||| |||||||||||||||||||||||| |||||||||||||| ||||| Sbjct: 1777 tgggataagacccaacagcgcgatctggacctgctccgaggtgcttgtcctgacagtgat 1718 Query: 254 ctgtccgctcagcttgttgttgagcccaaggcgaacagccatctttgaaccccttccaat 313 ||| || || || ||||| || | ||||| ||||| ||||||| || ||||||||||| Sbjct: 1717 ctggccacttagtttgttattcaatccaagacgaaccaccatcttcgagccccttccaat 1658 Query: 314 cgagaactgggactgcagattagcccccagggcaaggtcgcggcgccacttnatgaggga 373 ||||||||||||||||| ||| || || || |||||||| ||||||||||| || | || Sbjct: 1657 cgagaactgggactgcaaattcgcaccgagagcaaggtctcggcgccacttcatcaaaga 1598 Query: 374 caggcccaaggttgacaaggactggccaattggataatctttgtcttttaagcgcgcttc 433 || |||| |||||||| |||||||||||| ||||||||||||||||| | ||| || || Sbjct: 1597 aagacccagggttgacagggactggccaatcggataatctttgtctttcaggcgtgcctc 1538 Query: 434 caaatttgctccataggcggtatccccctgagcccgcattgcacctgtgcttgccactag 493 ||| || |||||||| ||||| || || ||||| ||||||||||||||||| ||||| || Sbjct: 1537 caagttagctccataagcggtgtcgccttgagctcgcattgcacctgtgctcgccaccag 1478 Query: 494 cgccagcctcttaccaacagagagctggtcctcgaccttcagcccagtggccacaatgtc 553 |||| |||||| |||| ||||||||||||||| |||||||||||||| ||||||||||| Sbjct: 1477 tgccaacctcttcccaagagagagctggtcctcaaccttcagcccagtcgccacaatgtc 1418 Query: 554 acccaagaaagtaacagagaatcctccagtggttttgttcttcttgatactcttgaattt 613 ||||||||||| || || ||||||||||| || ||||||||||||||| ||||||| || Sbjct: 1417 gcccaagaaagtcactgaaaatcctccagtagtcttgttcttcttgatattcttgaactt 1358 Query: 614 ggtctcaccacggaggatataagcaagctg 643 ||| ||||||||||| || || |||||||| Sbjct: 1357 ggtttcaccacggagaatgtacgcaagctg 1328
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 418 bits (211), Expect = e-114 Identities = 435/510 (85%) Strand = Plus / Plus Query: 134 aagctaataagcaaacgatggttcaccgggccggaagctccggtagatggaggctatcac 193 ||||||||| || || || ||||| | ||||| |||||||| ||| ||||||||| || Sbjct: 2913515 aagctaataggcgaaggagggttcgctgggcctgaagctcctgtaaatggaggctgcaac 2913574 Query: 194 tgggacaagacccagcagcgcgatctggacctgctccgatgtgcttgtcctgacggtgat 253 ||||| |||||||| |||||||||||||||||||||||| |||||||||||||| ||||| Sbjct: 2913575 tgggataagacccaacagcgcgatctggacctgctccgaggtgcttgtcctgacagtgat 2913634 Query: 254 ctgtccgctcagcttgttgttgagcccaaggcgaacagccatctttgaaccccttccaat 313 ||| || || || ||||| || | ||||| ||||| ||||||| || ||||||||||| Sbjct: 2913635 ctggccacttagtttgttattcaatccaagacgaaccaccatcttcgagccccttccaat 2913694 Query: 314 cgagaactgggactgcagattagcccccagggcaaggtcgcggcgccacttnatgaggga 373 ||||||||||||||||| ||| || || || |||||||| ||||||||||| || | || Sbjct: 2913695 cgagaactgggactgcaaattcgcaccgagagcaaggtctcggcgccacttcatcaaaga 2913754 Query: 374 caggcccaaggttgacaaggactggccaattggataatctttgtcttttaagcgcgcttc 433 || |||| |||||||| |||||||||||| ||||||||||||||||| | ||| || || Sbjct: 2913755 aagacccagggttgacagggactggccaatcggataatctttgtctttcaggcgtgcctc 2913814 Query: 434 caaatttgctccataggcggtatccccctgagcccgcattgcacctgtgcttgccactag 493 ||| || |||||||| ||||| || || ||||| ||||||||||||||||| ||||| || Sbjct: 2913815 caagttagctccataagcggtgtcgccttgagctcgcattgcacctgtgctcgccaccag 2913874 Query: 494 cgccagcctcttaccaacagagagctggtcctcgaccttcagcccagtggccacaatgtc 553 |||| |||||| |||| ||||||||||||||| |||||||||||||| ||||||||||| Sbjct: 2913875 tgccaacctcttcccaagagagagctggtcctcaaccttcagcccagtcgccacaatgtc 2913934 Query: 554 acccaagaaagtaacagagaatcctccagtggttttgttcttcttgatactcttgaattt 613 ||||||||||| || || ||||||||||| || ||||||||||||||| ||||||| || Sbjct: 2913935 gcccaagaaagtcactgaaaatcctccagtagtcttgttcttcttgatattcttgaactt 2913994 Query: 614 ggtctcaccacggaggatataagcaagctg 643 ||| ||||||||||| || || |||||||| Sbjct: 2913995 ggtttcaccacggagaatgtacgcaagctg 2914024 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 134 aagctaataagcaaacgatg 153 |||||||||||||||||||| Sbjct: 6093582 aagctaataagcaaacgatg 6093563
>dbj|AK102924.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033114D01, full insert sequence Length = 4269 Score = 418 bits (211), Expect = e-114 Identities = 435/510 (85%) Strand = Plus / Minus Query: 134 aagctaataagcaaacgatggttcaccgggccggaagctccggtagatggaggctatcac 193 ||||||||| || || || ||||| | ||||| |||||||| ||| ||||||||| || Sbjct: 4052 aagctaataggcgaaggagggttcgctgggcctgaagctcctgtaaatggaggctgcaac 3993 Query: 194 tgggacaagacccagcagcgcgatctggacctgctccgatgtgcttgtcctgacggtgat 253 ||||| |||||||| |||||||||||||||||||||||| |||||||||||||| ||||| Sbjct: 3992 tgggataagacccaacagcgcgatctggacctgctccgaggtgcttgtcctgacagtgat 3933 Query: 254 ctgtccgctcagcttgttgttgagcccaaggcgaacagccatctttgaaccccttccaat 313 ||| || || || ||||| || | ||||| ||||| ||||||| || ||||||||||| Sbjct: 3932 ctggccacttagtttgttattcaatccaagacgaaccaccatcttcgagccccttccaat 3873 Query: 314 cgagaactgggactgcagattagcccccagggcaaggtcgcggcgccacttnatgaggga 373 ||||||||||||||||| ||| || || || |||||||| ||||||||||| || | || Sbjct: 3872 cgagaactgggactgcaaattcgcaccgagagcaaggtctcggcgccacttcatcaaaga 3813 Query: 374 caggcccaaggttgacaaggactggccaattggataatctttgtcttttaagcgcgcttc 433 || |||| |||||||| |||||||||||| ||||||||||||||||| | ||| || || Sbjct: 3812 aagacccagggttgacagggactggccaatcggataatctttgtctttcaggcgtgcctc 3753 Query: 434 caaatttgctccataggcggtatccccctgagcccgcattgcacctgtgcttgccactag 493 ||| || |||||||| ||||| || || ||||| ||||||||||||||||| ||||| || Sbjct: 3752 caagttagctccataagcggtgtcgccttgagctcgcattgcacctgtgctcgccaccag 3693 Query: 494 cgccagcctcttaccaacagagagctggtcctcgaccttcagcccagtggccacaatgtc 553 |||| |||||| |||| ||||||||||||||| |||||||||||||| ||||||||||| Sbjct: 3692 tgccaacctcttcccaagagagagctggtcctcaaccttcagcccagtcgccacaatgtc 3633 Query: 554 acccaagaaagtaacagagaatcctccagtggttttgttcttcttgatactcttgaattt 613 ||||||||||| || || ||||||||||| || ||||||||||||||| ||||||| || Sbjct: 3632 gcccaagaaagtcactgaaaatcctccagtagtcttgttcttcttgatattcttgaactt 3573 Query: 614 ggtctcaccacggaggatataagcaagctg 643 ||| ||||||||||| || || |||||||| Sbjct: 3572 ggtttcaccacggagaatgtacgcaagctg 3543
>ref|XM_493929.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2940 Score = 412 bits (208), Expect = e-112 Identities = 414/483 (85%) Strand = Plus / Minus Query: 161 gggccggaagctccggtagatggaggctatcactgggacaagacccagcagcgcgatctg 220 ||||| |||||||| ||| ||||||||| ||||||| |||||||| |||||||||||| Sbjct: 2916 gggcctgaagctcctgtaaatggaggctgcaactgggataagacccaacagcgcgatctg 2857 Query: 221 gacctgctccgatgtgcttgtcctgacggtgatctgtccgctcagcttgttgttgagccc 280 |||||||||||| |||||||||||||| |||||||| || || || ||||| || | || Sbjct: 2856 gacctgctccgaggtgcttgtcctgacagtgatctggccacttagtttgttattcaatcc 2797 Query: 281 aaggcgaacagccatctttgaaccccttccaatcgagaactgggactgcagattagcccc 340 ||| ||||| ||||||| || |||||||||||||||||||||||||||| ||| || || Sbjct: 2796 aagacgaaccaccatcttcgagccccttccaatcgagaactgggactgcaaattcgcacc 2737 Query: 341 cagggcaaggtcgcggcgccacttnatgagggacaggcccaaggttgacaaggactggcc 400 || |||||||| ||||||||||| || | || || |||| |||||||| ||||||||| Sbjct: 2736 gagagcaaggtctcggcgccacttcatcaaagaaagacccagggttgacagggactggcc 2677 Query: 401 aattggataatctttgtcttttaagcgcgcttccaaatttgctccataggcggtatcccc 460 ||| ||||||||||||||||| | ||| || ||||| || |||||||| ||||| || || Sbjct: 2676 aatcggataatctttgtctttcaggcgtgcctccaagttagctccataagcggtgtcgcc 2617 Query: 461 ctgagcccgcattgcacctgtgcttgccactagcgccagcctcttaccaacagagagctg 520 ||||| ||||||||||||||||| ||||| || |||| |||||| |||| ||||||||| Sbjct: 2616 ttgagctcgcattgcacctgtgctcgccaccagtgccaacctcttcccaagagagagctg 2557 Query: 521 gtcctcgaccttcagcccagtggccacaatgtcacccaagaaagtaacagagaatcctcc 580 |||||| |||||||||||||| ||||||||||| ||||||||||| || || |||||||| Sbjct: 2556 gtcctcaaccttcagcccagtcgccacaatgtcgcccaagaaagtcactgaaaatcctcc 2497 Query: 581 agtggttttgttcttcttgatactcttgaatttggtctcaccacggaggatataagcaag 640 ||| || ||||||||||||||| ||||||| ||||| ||||||||||| || || ||||| Sbjct: 2496 agtagtcttgttcttcttgatattcttgaacttggtttcaccacggagaatgtacgcaag 2437 Query: 641 ctg 643 ||| Sbjct: 2436 ctg 2434
>dbj|AK065647.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013038D10, full insert sequence Length = 3790 Score = 410 bits (207), Expect = e-111 Identities = 434/510 (85%) Strand = Plus / Minus Query: 134 aagctaataagcaaacgatggttcaccgggccggaagctccggtagatggaggctatcac 193 ||||||||| || || || ||||| | ||||| |||||||| ||| ||||||||| || Sbjct: 3570 aagctaataggcgaaggagggttcgctgggcctgaagctcctgtaaatggaggctgcaac 3511 Query: 194 tgggacaagacccagcagcgcgatctggacctgctccgatgtgcttgtcctgacggtgat 253 ||||| |||||||| |||||||||||||||||||||||| |||||||||||||| ||||| Sbjct: 3510 tgggataagacccaacagcgcgatctggacctgctccgaggtgcttgtcctgacagtgat 3451 Query: 254 ctgtccgctcagcttgttgttgagcccaaggcgaacagccatctttgaaccccttccaat 313 ||| || || || ||||| || | ||||| ||||| ||||||| || ||||||||||| Sbjct: 3450 ctggccacttagtttgttattcaatccaagacgaaccaccatcttcgagccccttccaat 3391 Query: 314 cgagaactgggactgcagattagcccccagggcaaggtcgcggcgccacttnatgaggga 373 ||||||||||||||||| ||| || || || |||||||| ||||||||||| || | || Sbjct: 3390 cgagaactgggactgcaaattcgcaccgagagcaaggtctcggcgccacttcatcaaaga 3331 Query: 374 caggcccaaggttgacaaggactggccaattggataatctttgtcttttaagcgcgcttc 433 || |||| |||||||| |||||||||||| ||||||||||||||||| | ||| || || Sbjct: 3330 aagacccagggttgacagggactggccaatcggataatctttgtctttcaggcgtgcctc 3271 Query: 434 caaatttgctccataggcggtatccccctgagcccgcattgcacctgtgcttgccactag 493 ||| || |||||||| ||||| || || ||||| ||||||||||||||||| ||||| || Sbjct: 3270 caagttagctccataagcggtgtcgccttgagctcgcattgcacctgtgctcgccaccag 3211 Query: 494 cgccagcctcttaccaacagagagctggtcctcgaccttcagcccagtggccacaatgtc 553 |||| |||||| |||| ||||||||||||||| |||||||||||||| ||||||||||| Sbjct: 3210 tgccaacctcttcccaagagagagctggtcctcaaccttcagcccagtcgccacaatgtc 3151 Query: 554 acccaagaaagtaacagagaatcctccagtggttttgttcttcttgatactcttgaattt 613 ||||||||||| || || ||||| ||||| || ||||||||||||||| ||||||| || Sbjct: 3150 gcccaagaaagtcactgaaaatcccccagtagtcttgttcttcttgatattcttgaactt 3091 Query: 614 ggtctcaccacggaggatataagcaagctg 643 ||| ||||||||||| || || |||||||| Sbjct: 3090 ggtttcaccacggagaatgtacgcaagctg 3061
>gb|BT018894.1| Zea mays clone EL01T0206D09.d mRNA sequence Length = 2400 Score = 361 bits (182), Expect = 2e-96 Identities = 426/508 (83%) Strand = Plus / Minus Query: 136 gctaataagcaaacgatggttcaccgggccggaagctccggtagatggaggctatcactg 195 |||||||||| || || ||||||| |||||||||||||| ||||||||||||| || | Sbjct: 2164 gctaataagcgaaggacggttcactgggccggaagctcctgtagatggaggctgcaaccg 2105 Query: 196 ggacaagacccagcagcgcgatctggacctgctccgatgtgcttgtcctgacggtgatct 255 | || |||||||| || |||||||||||||||||||| |||||||||||||| ||||||| Sbjct: 2104 gtacgagacccagaagtgcgatctggacctgctccgaggtgcttgtcctgaccgtgatct 2045 Query: 256 gtccgctcagcttgttgttgagcccaaggcgaacagccatctttgaaccccttccaatcg 315 | ||||||||||||||||| || ||||| || || |||||||| || |||||||| || | Sbjct: 2044 gcccgctcagcttgttgttcagaccaagtcgcactgccatcttcgacccccttccgatgg 1985 Query: 316 agaactgggactgcagattagcccccagggcaaggtcgcggcgccacttnatgagggaca 375 ||||||||||||||| || || ||||| |||||||| ||||||||||| || || || | Sbjct: 1984 agaactgggactgcaagttcgcgcccagagcaaggtcccggcgccacttcatcagagaga 1925 Query: 376 ggcccaaggttgacaaggactggccaattggataatctttgtcttttaagcgcgcttcca 435 | |||| ||||| | |||||||||||| ||||| |||||||| || | ||| || |||| Sbjct: 1924 gacccagcgttgagagggactggccaatcggatagtctttgtccttcaggcgtgcctcca 1865 Query: 436 aatttgctccataggcggtatccccctgagcccgcattgcacctgtgcttgccactagcg 495 | || |||||||| || || ||||| || || ||||| || || ||||| || ||||||| Sbjct: 1864 agttagctccatatgcagtttccccttgggctcgcatcgcgccagtgctggcaactagcg 1805 Query: 496 ccagcctcttaccaacagagagctggtcctcgaccttcagcccagtggccacaatgtcac 555 ||||||||| |||| ||||||||||||||||||||||| ||||| ||||||||||||| Sbjct: 1804 acagcctcttcccaagggagagctggtcctcgaccttcagtccagttgccacaatgtcac 1745 Query: 556 ccaagaaagtaacagagaatcctccagtggttttgttcttcttgatactcttgaatttgg 615 ||| |||||| || ||||| ||||| |||| |||||||||||||| |||||| ||| | Sbjct: 1744 ccaggaaagttaccgagaagcctcctgtggncttgttcttcttgatgttcttgatttttg 1685 Query: 616 tctcaccacggaggatataagcaagctg 643 ||| || ||||| ||||| |||||||| Sbjct: 1684 cctcgccgcggagaatataggcaagctg 1657
>gb|BT017569.1| Zea mays clone EL01N0426F07.c mRNA sequence Length = 1227 Score = 359 bits (181), Expect = 7e-96 Identities = 426/508 (83%) Strand = Plus / Minus Query: 136 gctaataagcaaacgatggttcaccgggccggaagctccggtagatggaggctatcactg 195 |||||||||| || || ||||||| |||||||||||||| ||| ||||||||| || | Sbjct: 942 gctaataagcgaaggacggttcactgggccggaagctcctgtaaatggaggctgcaaccg 883 Query: 196 ggacaagacccagcagcgcgatctggacctgctccgatgtgcttgtcctgacggtgatct 255 | || |||||||| || |||||||||||||||||||| |||||||||||||| ||||||| Sbjct: 882 gtacgagacccagaagtgcgatctggacctgctccgaggtgcttgtcctgaccgtgatct 823 Query: 256 gtccgctcagcttgttgttgagcccaaggcgaacagccatctttgaaccccttccaatcg 315 | ||||||||||||||||| || ||||| || || |||||||| || |||||||| || | Sbjct: 822 gcccgctcagcttgttgttcagaccaagtcgcactgccatcttcgacccccttccgatgg 763 Query: 316 agaactgggactgcagattagcccccagggcaaggtcgcggcgccacttnatgagggaca 375 ||||||||||||||| || || ||||| |||||||| ||||||||||| || || || | Sbjct: 762 agaactgggactgcaagttcgcgcccagagcaaggtcccggcgccacttcatcagagaga 703 Query: 376 ggcccaaggttgacaaggactggccaattggataatctttgtcttttaagcgcgcttcca 435 | |||| ||||| | |||||||||||| ||||| |||||||| || | ||| || |||| Sbjct: 702 gacccagcgttgagagggactggccaatcggatagtctttgtccttcaggcgtgcctcca 643 Query: 436 aatttgctccataggcggtatccccctgagcccgcattgcacctgtgcttgccactagcg 495 | || |||||||| || || ||||| || || ||||| || || ||||| || ||||||| Sbjct: 642 agttagctccatatgcagtttccccttgggctcgcatcgcgccagtgctggcaactagcg 583 Query: 496 ccagcctcttaccaacagagagctggtcctcgaccttcagcccagtggccacaatgtcac 555 ||||||||| |||| ||||||||||||||||||||||| ||||| ||||||||||||| Sbjct: 582 acagcctcttcccaagggagagctggtcctcgaccttcagtccagttgccacaatgtcac 523 Query: 556 ccaagaaagtaacagagaatcctccagtggttttgttcttcttgatactcttgaatttgg 615 ||| |||||| || ||||| ||||| ||||| |||||||||||||| |||||| ||| | Sbjct: 522 ccaggaaagttaccgagaagcctcctgtggtcttgttcttcttgatgttcttgatttttg 463 Query: 616 tctcaccacggaggatataagcaagctg 643 ||| || ||||| ||||| |||||||| Sbjct: 462 cctcgccgcggagaatataggcaagctg 435
>gb|BT019204.1| Zea mays clone Contig877.F mRNA sequence Length = 1517 Score = 349 bits (176), Expect = 7e-93 Identities = 427/511 (83%) Strand = Plus / Minus Query: 133 caagctaataagcaaacgatggttcaccgggccggaagctccggtagatggaggctatca 192 |||||||||||||||| |||||||||| ||||||||| |||||||| ||||||||| | Sbjct: 1260 caagctaataagcaaaggatggttcactgggccggaaactccggtaaatggaggctgcaa 1201 Query: 193 ctgggacaagacccagcagcgcgatctggacctgctccgatgtgcttgtcctgacggtga 252 | || || |||||||| || || |||||||||||||| || ||||||||||||||||||| Sbjct: 1200 ccggtacgagacccagaagtgcaatctggacctgctctgaggtgcttgtcctgacggtga 1141 Query: 253 tctgtccgctcagcttgttgttgagcccaaggcgaacagccatctttgaaccccttccaa 312 |||| || |||||||||||||| || ||||| ||||| |||||||| || |||||||| | Sbjct: 1140 tctgcccactcagcttgttgttcagaccaagtcgaactgccatcttcgacccccttccga 1081 Query: 313 tcgagaactgggactgcagattagcccccagggcaaggtcgcggcgccacttnatgaggg 372 | || ||||||||||||| || || ||||| |||||||| || |||||||| || || | Sbjct: 1080 tggaaaactgggactgcaagtttgcgcccagagcaaggtcccgacgccacttcatcagag 1021 Query: 373 acaggcccaaggttgacaaggactggccaattggataatctttgtcttttaagcgcgctt 432 | || ||||||||||| | ||||||| | || ||||| |||||||| || ||||| || | Sbjct: 1020 agagacccaaggttgagagggactgggctatcggatagtctttgtccttcaagcgtgcct 961 Query: 433 ccaaatttgctccataggcggtatccccctgagcccgcattgcacctgtgcttgccacta 492 ||| || |||||||| || || ||||| || || ||||| || || ||||| || |||| Sbjct: 960 ccaggttagctccatatgcagtgtccccttgggctcgcatcgcgccagtgctagcaacta 901 Query: 493 gcgccagcctcttaccaacagagagctggtcctcgaccttcagcccagtggccacaatgt 552 | | || |||||| |||| |||||||||||||| | |||||| ||||| |||||||||| Sbjct: 900 gtgacaacctcttcccaagggagagctggtcctcaatcttcagtccagttgccacaatgt 841 Query: 553 cacccaagaaagtaacagagaatcctccagtggttttgttcttcttgatactcttgaatt 612 | |||| |||||| || ||||| ||||| ||||||||||||||||||||| |||||| || Sbjct: 840 cgcccaggaaagttactgagaaccctcctgtggttttgttcttcttgatattcttgattt 781 Query: 613 tggtctcaccacggaggatataagcaagctg 643 | ||||| |||||||| ||||| |||||||| Sbjct: 780 ttgtctccccacggagaatatatgcaagctg 750
>gb|BT017999.1| Zea mays clone EL01N0526F10.c mRNA sequence Length = 787 Score = 349 bits (176), Expect = 7e-93 Identities = 427/511 (83%) Strand = Plus / Minus Query: 133 caagctaataagcaaacgatggttcaccgggccggaagctccggtagatggaggctatca 192 |||||||||||||||| |||||||||| ||||||||| |||||||| ||||||||| | Sbjct: 534 caagctaataagcaaaggatggttcactgggccggaaactccggtaaatggaggctgcaa 475 Query: 193 ctgggacaagacccagcagcgcgatctggacctgctccgatgtgcttgtcctgacggtga 252 | || || |||||||| || || |||||||||||||| || ||||||||||||||||||| Sbjct: 474 ccggtacgagacccagaagtgcaatctggacctgctctgaggtgcttgtcctgacggtga 415 Query: 253 tctgtccgctcagcttgttgttgagcccaaggcgaacagccatctttgaaccccttccaa 312 |||| || |||||||||||||| || ||||| ||||| |||||||| || |||||||| | Sbjct: 414 tctgcccactcagcttgttgttcagaccaagtcgaactgccatcttcgacccccttccga 355 Query: 313 tcgagaactgggactgcagattagcccccagggcaaggtcgcggcgccacttnatgaggg 372 | || ||||||||||||| || || ||||| |||||||| || |||||||| || || | Sbjct: 354 tggaaaactgggactgcaagtttgcgcccagagcaaggtcccgacgccacttcatcagag 295 Query: 373 acaggcccaaggttgacaaggactggccaattggataatctttgtcttttaagcgcgctt 432 | || ||||||||||| | ||||||| | || ||||| |||||||| || ||||| || | Sbjct: 294 agagacccaaggttgagagggactgggctatcggatagtctttgtccttcaagcgtgcct 235 Query: 433 ccaaatttgctccataggcggtatccccctgagcccgcattgcacctgtgcttgccacta 492 ||| || |||||||| || || ||||| || || ||||| || || ||||| || |||| Sbjct: 234 ccaggttagctccatatgcagtgtccccttgggctcgcatcgcgccagtgctagcaacta 175 Query: 493 gcgccagcctcttaccaacagagagctggtcctcgaccttcagcccagtggccacaatgt 552 | | || |||||| |||| |||||||||||||| | |||||| ||||| |||||||||| Sbjct: 174 gtgacaacctcttcccaagggagagctggtcctcaatcttcagtccagttgccacaatgt 115 Query: 553 cacccaagaaagtaacagagaatcctccagtggttttgttcttcttgatactcttgaatt 612 | |||| |||||| || ||||| |||| |||||||||||||||||||||| |||||| || Sbjct: 114 cgcccaggaaagttactgagaaccctcgagtggttttgttcttcttgatattcttgattt 55 Query: 613 tggtctcaccacggaggatataagcaagctg 643 | ||||| |||||||| ||||| |||||||| Sbjct: 54 ttgtctccccacggagaatatatgcaagctg 24
>gb|AY110505.1| Zea mays CL12299_1 mRNA sequence Length = 752 Score = 240 bits (121), Expect = 5e-60 Identities = 374/459 (81%), Gaps = 1/459 (0%) Strand = Plus / Plus Query: 133 caagctaataagcaaacgatggttcaccgggccggaagctccggtagatggaggctatca 192 |||||||||||||||| |||||||||| ||||||||| |||||||| ||||||||| | Sbjct: 264 caagctaataagcaaaggatggttcactgggccggaaactccggtaaatggaggctgcaa 323 Query: 193 ctgggacaagacccagcagcgcgatctggacctgctccgatgtgcttgtcctgacggtga 252 | || || |||||||| || || |||||||||||||| || ||||||||||||||||||| Sbjct: 324 ccggtacgagacccagaagtgcaatctggacctgctctgaggtgcttgtcctgacggtga 383 Query: 253 tctgtccgctcagcttgttgttgagcccaaggcgaacagccatctttgaaccccttccaa 312 |||| || |||||||||||||| || ||||| ||||| |||||||| || |||| | Sbjct: 384 tctgcccactcagcttgttgttcagaccaagtcgaactgccatcttcgannnnnttccga 443 Query: 313 tcgagaactgggactgcagattagcccccagggcaaggtcgcggcgccacttnatgaggg 372 | || ||||||||||||| || || ||||| |||||||| || |||||||| || || | Sbjct: 444 tggaaaactgggactgcaagtttgcgcccagagcaaggtcccgacgccacttcatcagag 503 Query: 373 acaggcccaaggttgacaaggactggccaattggataatctttgtcttttaagcgcgctt 432 | || ||||||||||| | ||||||| | || ||||| |||||||| || ||||| || | Sbjct: 504 agagacccaaggttgagagggactgggctatcggatagtctttgtccttcaagcgtgcct 563 Query: 433 ccaaatttgctccataggcggtatccccctgagcccgcattgcacctgtgcttgccacta 492 ||| || |||||||| || || ||||| || || ||||| || || ||||| || |||| Sbjct: 564 ccaggttagctccatatgcagtgtccccttgggctcgcatcgcgccagtgctagcaacta 623 Query: 493 gcgccagcctcttaccaacagagagctggtcctcgaccttcagcccagtggccacaatgt 552 | | || |||||| |||| ||||||| | |||| | |||||| ||||| |||||||||| Sbjct: 624 gtgacaacctcttcccaagggagagcttggcctcaatcttcagtccagttgccacaatgt 683 Query: 553 c-acccaagaaagtaacagagaatcctccagtggttttg 590 | |||| |||||| || ||||| ||||| ||||||||| Sbjct: 684 cgccccaggaaagttactgagaaccctcctgtggttttg 722
>ref|NM_116485.2| Arabidopsis thaliana TOC159 AT4G02510 (TOC159) mRNA, complete cds Length = 4740 Score = 48.1 bits (24), Expect = 0.036 Identities = 30/32 (93%) Strand = Plus / Minus Query: 243 ctgacggtgatctgtccgctcagcttgttgtt 274 ||||| |||||||||||||||| ||||||||| Sbjct: 4397 ctgactgtgatctgtccgctcatcttgttgtt 4366
>gb|AC002330.1| Arabidopsis thaliana BAC T10P11 from chromosome IV, near 15 cM, complete sequence Length = 113566 Score = 48.1 bits (24), Expect = 0.036 Identities = 30/32 (93%) Strand = Plus / Plus Query: 243 ctgacggtgatctgtccgctcagcttgttgtt 274 ||||| |||||||||||||||| ||||||||| Sbjct: 101849 ctgactgtgatctgtccgctcatcttgttgtt 101880
>emb|AL161494.2|ATCHRIV6 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 6 Length = 194892 Score = 48.1 bits (24), Expect = 0.036 Identities = 30/32 (93%) Strand = Plus / Minus Query: 243 ctgacggtgatctgtccgctcagcttgttgtt 274 ||||| |||||||||||||||| ||||||||| Sbjct: 144896 ctgactgtgatctgtccgctcatcttgttgtt 144865
>gb|AY133653.1| Arabidopsis thaliana AT4g02510/T10P11_19 mRNA, complete cds Length = 1446 Score = 48.1 bits (24), Expect = 0.036 Identities = 30/32 (93%) Strand = Plus / Minus Query: 243 ctgacggtgatctgtccgctcagcttgttgtt 274 ||||| |||||||||||||||| ||||||||| Sbjct: 1331 ctgactgtgatctgtccgctcatcttgttgtt 1300
>gb|AF412063.1|AF412063 Arabidopsis thaliana AT4g02510/T10P11_19 mRNA, complete cds Length = 1733 Score = 48.1 bits (24), Expect = 0.036 Identities = 30/32 (93%) Strand = Plus / Minus Query: 243 ctgacggtgatctgtccgctcagcttgttgtt 274 ||||| |||||||||||||||| ||||||||| Sbjct: 1390 ctgactgtgatctgtccgctcatcttgttgtt 1359
>dbj|AK222164.1| Arabidopsis thaliana mRNA for chloroplast protein import component Toc159-like, partial cds, clone: RAFL23-20-P12 Length = 2322 Score = 48.1 bits (24), Expect = 0.036 Identities = 30/32 (93%) Strand = Plus / Minus Query: 243 ctgacggtgatctgtccgctcagcttgttgtt 274 ||||| |||||||||||||||| ||||||||| Sbjct: 1957 ctgactgtgatctgtccgctcatcttgttgtt 1926
>gb|AF069298.1|T14P8 Arabidopsis thaliana BAC T14P8 Length = 94536 Score = 48.1 bits (24), Expect = 0.036 Identities = 30/32 (93%) Strand = Plus / Plus Query: 243 ctgacggtgatctgtccgctcagcttgttgtt 274 ||||| |||||||||||||||| ||||||||| Sbjct: 1719 ctgactgtgatctgtccgctcatcttgttgtt 1750
>gb|AC152752.18| Medicago truncatula clone mth2-89c9, complete sequence Length = 117577 Score = 44.1 bits (22), Expect = 0.56 Identities = 34/38 (89%) Strand = Plus / Minus Query: 237 cttgtcctgacggtgatctgtccgctcagcttgttgtt 274 |||||||| || ||||||||||| || ||||||||||| Sbjct: 62237 cttgtcctcacagtgatctgtccactaagcttgttgtt 62200
>gb|AC157758.4| Medicago truncatula clone mth2-62b13, complete sequence Length = 106286 Score = 44.1 bits (22), Expect = 0.56 Identities = 34/38 (89%) Strand = Plus / Plus Query: 237 cttgtcctgacggtgatctgtccgctcagcttgttgtt 274 |||||||| || ||||||||||| || ||||||||||| Sbjct: 12405 cttgtcctcacagtgatctgtccactaagcttgttgtt 12442
>gb|AC016542.11| Homo sapiens chromosome 10 clone RP11-354E23, complete sequence Length = 171480 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Plus Query: 548 aatgtcacccaagaaagtaaca 569 |||||||||||||||||||||| Sbjct: 124574 aatgtcacccaagaaagtaaca 124595
>gb|AC010987.9| Homo sapiens BAC clone RP11-553M15 from 2, complete sequence Length = 193319 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Plus Query: 33 agggaaaaatggaactgataca 54 |||||||||||||||||||||| Sbjct: 113040 agggaaaaatggaactgataca 113061
>ref|NM_197639.1| Oryza sativa (japonica cultivar-group) putative outer envelope protein (OSJNBa0082M15.3), mRNA Length = 3275 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 397 ggccaattggataatctttgtcttt 421 |||||||||| |||||||||||||| Sbjct: 2788 ggccaattgggtaatctttgtcttt 2764
>ref|XM_362002.1| Magnaporthe grisea 70-15 predicted protein (MG04447.4) partial cds Length = 894 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 209 cagcgcgatctggacctgctc 229 ||||||||||||||||||||| Sbjct: 540 cagcgcgatctggacctgctc 520
>gb|AC163737.3| Pan troglodytes BAC clone CH251-547O12 from chromosome 6, complete sequence Length = 207116 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 101 atgagatataagtaaatagat 121 ||||||||||||||||||||| Sbjct: 97564 atgagatataagtaaatagat 97584
>emb|AL035588.21|HS696P19 Human DNA sequence from clone RP4-696P19 on chromosome 6p12.3-21.2 Contains the 3' end of the TFEB gene for transcription factor EB (TCFEB), a nucleophosmin (nucleolar phosphoprotein B23, numatrin) (NPM1) pseudogene, the MDFI gene for MyoD family inhibitor, the 5' end of a novel gene and two CpG islands, complete sequence Length = 110665 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 101 atgagatataagtaaatagat 121 ||||||||||||||||||||| Sbjct: 4879 atgagatataagtaaatagat 4859
>gb|AC020666.8| Oryza sativa chromosome 10 BAC OSJNBa0082M15 genomic sequence, complete sequence Length = 158550 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 397 ggccaattggataatctttgtcttt 421 |||||||||| |||||||||||||| Sbjct: 109440 ggccaattgggtaatctttgtcttt 109416
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 397 ggccaattggataatctttgtcttt 421 |||||||||| |||||||||||||| Sbjct: 20954951 ggccaattgggtaatctttgtcttt 20954975
>gb|AC096557.1| Homo sapiens BAC clone RP11-122A7 from 2, complete sequence Length = 79683 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 178 agatggaggctatcactggga 198 ||||||||||||||||||||| Sbjct: 54346 agatggaggctatcactggga 54326
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 210 agcgcgatctggacctgctcc 230 ||||||||||||||||||||| Sbjct: 2979116 agcgcgatctggacctgctcc 2979136
>dbj|AK072270.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023008M11, full insert sequence Length = 3464 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 397 ggccaattggataatctttgtcttt 421 |||||||||| |||||||||||||| Sbjct: 2934 ggccaattgggtaatctttgtcttt 2910
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 397 ggccaattggataatctttgtcttt 421 |||||||||| |||||||||||||| Sbjct: 20966215 ggccaattgggtaatctttgtcttt 20966239
>gb|AC136520.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0017O06, complete sequence Length = 151656 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 134 aagctaataagcaaacgatg 153 |||||||||||||||||||| Sbjct: 41151 aagctaataagcaaacgatg 41132
>gb|AC136519.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0007C23, complete sequence Length = 173764 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 134 aagctaataagcaaacgatg 153 |||||||||||||||||||| Sbjct: 141135 aagctaataagcaaacgatg 141116
>gb|AC146066.4| Pan troglodytes BAC clone RP43-60F19 from 7, complete sequence Length = 183557 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 34 gggaaaaatggaactgatac 53 |||||||||||||||||||| Sbjct: 73565 gggaaaaatggaactgatac 73546
>gb|CP000261.1| Streptococcus pyogenes MGAS2096, complete genome Length = 1860355 Score = 40.1 bits (20), Expect = 8.8 Identities = 29/32 (90%) Strand = Plus / Minus Query: 582 gtggttttgttcttcttgatactcttgaattt 613 ||||||||||| ||||| | |||||||||||| Sbjct: 960146 gtggttttgtttttcttcaaactcttgaattt 960115
>gb|CP000259.1| Streptococcus pyogenes MGAS9429, complete genome Length = 1836467 Score = 40.1 bits (20), Expect = 8.8 Identities = 29/32 (90%) Strand = Plus / Minus Query: 582 gtggttttgttcttcttgatactcttgaattt 613 ||||||||||| ||||| | |||||||||||| Sbjct: 999271 gtggttttgtttttcttcaaactcttgaattt 999240
>gb|AC000119.1| Homo sapiens BAC clone CTB-104I4 from 7, complete sequence Length = 191191 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 387 gacaaggactggccaattggataa 410 ||||||||||||| |||||||||| Sbjct: 66962 gacaaggactggcaaattggataa 66985
>gb|AC003079.2| Homo sapiens BAC clone GS1-303P24 from 7, complete sequence Length = 62331 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 34 gggaaaaatggaactgatac 53 |||||||||||||||||||| Sbjct: 57839 gggaaaaatggaactgatac 57858
>emb|Z82242.1|HS96A9 Human DNA sequence from clone RP1-96A9 on chromosome X Contains a CpG island, complete sequence Length = 91690 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 387 gacaaggactggccaattggataa 410 ||||||||||||| |||||||||| Sbjct: 20724 gacaaggactggcaaattggataa 20747
>emb|AL590397.7| Human DNA sequence from clone RP11-376O21 on chromosome 9 Contains the 3' end of the PTPRD gene for protein tyrosine phosphatase, receptor type, D (HPTP, PTPD, HPTPD), complete sequence Length = 168323 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 387 gacaaggactggccaattggataa 410 |||| ||||||||||||||||||| Sbjct: 81052 gacacggactggccaattggataa 81075
>emb|AL445926.5| Human DNA sequence from clone RP11-439I6 on chromosome 9 Contains the 3' end of the PTPRD gene for protein tyrosine phosphatase, receptor type, D (HPTP, PTPD, HPTPD), complete sequence Length = 167253 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 387 gacaaggactggccaattggataa 410 |||| ||||||||||||||||||| Sbjct: 138078 gacacggactggccaattggataa 138101
>emb|AL023655.1|HS242N11 Human DNA sequence from clone RP1-242N11 on chromosome 6p22.3-23, complete sequence Length = 167514 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 387 gacaaggactggccaattggataa 410 ||||||||||||| |||||||||| Sbjct: 142079 gacaaggactggcaaattggataa 142102
>emb|AL662949.4|OSJN00144 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0115I21, complete sequence Length = 127162 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 479 tgtgcttgccactagcgccagcct 502 ||||||||||||||||| |||||| Sbjct: 103944 tgtgcttgccactagcggcagcct 103921
>emb|AL662959.3|OSJN00160 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0019G23, complete sequence Length = 150305 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 479 tgtgcttgccactagcgccagcct 502 ||||||||||||||||| |||||| Sbjct: 141266 tgtgcttgccactagcggcagcct 141289
>gb|AF186190.4| Homo sapiens chromosome 8 clone CTC-369M3 map 8q24.3 , complete sequence Length = 152405 Score = 40.1 bits (20), Expect = 8.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 374 caggcccaaggttgacaaggactggcca 401 |||||||||||||||| ||| ||||||| Sbjct: 99145 caggcccaaggttgaccagggctggcca 99118
>gb|AC079310.20| Homo sapiens 12 BAC RP11-850F7 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 180971 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 571 agaatcctccagtggttttg 590 |||||||||||||||||||| Sbjct: 124734 agaatcctccagtggttttg 124715
>gb|AC068759.11| Homo sapiens 3 BAC RP11-324C10 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 183357 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 470 cattgcacctgtgcttgcca 489 |||||||||||||||||||| Sbjct: 13376 cattgcacctgtgcttgcca 13357
>gb|AC175822.2| Pan troglodytes BAC clone CH251-442M6 from chromosome 7, complete sequence Length = 163335 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 34 gggaaaaatggaactgatac 53 |||||||||||||||||||| Sbjct: 126259 gggaaaaatggaactgatac 126240
>gb|AC017067.4|AC017067 Homo sapiens BAC clone RP11-370B11 from 9, complete sequence Length = 191373 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 387 gacaaggactggccaattggataa 410 |||| ||||||||||||||||||| Sbjct: 90208 gacacggactggccaattggataa 90185
>gb|AC016565.6|AC016565 Homo sapiens chromosome 5 clone CTC-538O12, complete sequence Length = 140092 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 577 ctccagtggttttgttcttc 596 |||||||||||||||||||| Sbjct: 62706 ctccagtggttttgttcttc 62687
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 479 tgtgcttgccactagcgccagcct 502 ||||||||||||||||| |||||| Sbjct: 4513534 tgtgcttgccactagcggcagcct 4513557
>gb|AC156541.7| Mus musculus chromosome 1, clone RP23-478I8, complete sequence Length = 173297 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 391 aggactggccaattggataa 410 |||||||||||||||||||| Sbjct: 27193 aggactggccaattggataa 27212
>gb|AC027026.11| Homo sapiens chromosome 11, clone RP11-589F4, complete sequence Length = 155376 Score = 40.1 bits (20), Expect = 8.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 16 caatctgcggggcagaaagggaaaaatg 43 ||||||| |||||||||||| ||||||| Sbjct: 14221 caatctgaggggcagaaaggaaaaaatg 14248
>gb|AC008176.3|AC008176 Homo sapiens BAC clone RP11-451F11 from 7p11.2-p21, complete sequence Length = 90180 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 387 gacaaggactggccaattggataa 410 ||||||||||||| |||||||||| Sbjct: 69398 gacaaggactggcaaattggataa 69375
>gb|AC008518.3|AC008518 Homo sapiens chromosome 5 clone CTC-459I6, complete sequence Length = 172551 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 577 ctccagtggttttgttcttc 596 |||||||||||||||||||| Sbjct: 159258 ctccagtggttttgttcttc 159239
>gb|AC102776.10| Mus musculus chromosome 1, clone RP23-469D21, complete sequence Length = 190746 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 575 tcctccagtggttttgttct 594 |||||||||||||||||||| Sbjct: 12872 tcctccagtggttttgttct 12853 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,305,064 Number of Sequences: 3902068 Number of extensions: 5305064 Number of successful extensions: 102465 Number of sequences better than 10.0: 58 Number of HSP's better than 10.0 without gapping: 59 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 102158 Number of HSP's gapped (non-prelim): 301 length of query: 643 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 620 effective length of database: 17,143,297,704 effective search space: 10628844576480 effective search space used: 10628844576480 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)