Clone Name | rbah61n10 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | NU1M_MYTED (Q00860) NADH-ubiquinone oxidoreductase chain 1 (EC 1... | 29 | 3.0 | 2 | AKR1_EMENI (Q5B0V6) Palmitoyltransferase akr1 (EC 2.3.1.-) (Anky... | 28 | 8.7 |
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>NU1M_MYTED (Q00860) NADH-ubiquinone oxidoreductase chain 1 (EC 1.6.5.3) (NADH| dehydrogenase subunit 1) Length = 305 Score = 29.3 bits (64), Expect = 3.0 Identities = 12/25 (48%), Positives = 17/25 (68%) Frame = -1 Query: 189 WEKQFFFFFCSLLVWMILWMLVRLA 115 +++ FFFF L V M++WML LA Sbjct: 171 FQQSLFFFFLPLCVVMLVWMLCMLA 195
>AKR1_EMENI (Q5B0V6) Palmitoyltransferase akr1 (EC 2.3.1.-) (Ankyrin| repeat-containing protein akr1) Length = 737 Score = 27.7 bits (60), Expect = 8.7 Identities = 9/24 (37%), Positives = 19/24 (79%) Frame = -1 Query: 180 QFFFFFCSLLVWMILWMLVRLAIH 109 +FFFF+ LL++++LW+L + ++ Sbjct: 314 KFFFFWPFLLLFVVLWILSNMVVY 337 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 24,054,308 Number of Sequences: 219361 Number of extensions: 321978 Number of successful extensions: 842 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 815 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 840 length of database: 80,573,946 effective HSP length: 39 effective length of database: 72,018,867 effective search space used: 1728452808 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)