>emb|AL034554.8|HS994L9 Human DNA sequence from clone RP5-994L9 on chromosome 20p12.3-13 Contains
              STS and GSSs, complete sequence
          Length = 137739

 Score = 42.1 bits (21), Expect = 0.61
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 3      gaaactggaaaagaattatca 23
              |||||||||||||||||||||
Sbjct: 123889 gaaactggaaaagaattatca 123869

>emb|BX640442.1| Bordetella bronchiseptica strain RB50, complete genome; segment 6/16
          Length = 349876

 Score = 42.1 bits (21), Expect = 0.61
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 77     ccaaggcggcctccccctctc 97
              |||||||||||||||||||||
Sbjct: 269659 ccaaggcggcctccccctctc 269639

>gb|AC131059.6| Mus musculus chromosome 1, clone RP24-108K12, complete sequence
          Length = 189961

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 128   agcatccagaggatcatcca 147
             ||||||||||||||||||||
Sbjct: 87000 agcatccagaggatcatcca 87019

>ref|NM_024676.3| Homo sapiens chromosome 1 open reading frame 113 (C1orf113), mRNA
          Length = 3182

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 76   gccaaggcggcctccccctc 95
            ||||||||||||||||||||
Sbjct: 2821 gccaaggcggcctccccctc 2802

>gb|AC119846.14| Mus musculus chromosome 1, clone RP23-45A13, complete sequence
          Length = 242338

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 128    agcatccagaggatcatcca 147
              ||||||||||||||||||||
Sbjct: 216464 agcatccagaggatcatcca 216445

>emb|AL591845.27| Human DNA sequence from clone RP11-268J15 on chromosome 1 Contains the
             3' end of a novel gene for thyroid hormone
             receptor-associated protein, 150 kDa subunit (TRAP150)
             (FLJ22082), a novel transcript (FLJ22938), a gene for a
             novel protein (FLJ10647), the 3' end of a gene for
             Ser/Thr-like kinase (MGC4796) and two CpG islands,
             complete sequence
          Length = 104307

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 76    gccaaggcggcctccccctc 95
             ||||||||||||||||||||
Sbjct: 60761 gccaaggcggcctccccctc 60742

>ref|XM_792039.1| PREDICTED: Strongylocentrotus purpuratus similar to MASK-4E-BP3
            protein (LOC592521), partial mRNA
          Length = 5635

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 121  ccggacaagcatccagagga 140
            ||||||||||||||||||||
Sbjct: 1588 ccggacaagcatccagagga 1607

>dbj|AK056459.1| Homo sapiens cDNA FLJ31897 fis, clone NT2RP7004080, weakly similar to
            CELL SURFACE GLYCOPROTEIN 1 PRECURSOR
          Length = 3180

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 76   gccaaggcggcctccccctc 95
            ||||||||||||||||||||
Sbjct: 2822 gccaaggcggcctccccctc 2803

>gb|AE017263.1| Mesoplasma florum L1 complete genome
          Length = 793224

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 3      gaaactggaaaagaattatcaat 25
              ||||||||||||||||| |||||
Sbjct: 593470 gaaactggaaaagaattttcaat 593492

>ref|NG_005114.1| Homo sapiens coagulation factor VIII region (F8@) on chromosome X
          Length = 652898

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 10     gaaaagaattatcaatcca 28
              |||||||||||||||||||
Sbjct: 343251 gaaaagaattatcaatcca 343233

>gb|AC125106.3| Mus musculus BAC clone RP24-221A9 from chromosome 9, complete sequence
          Length = 159785

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 30     caacagtctgtgtacaggg 48
              |||||||||||||||||||
Sbjct: 154134 caacagtctgtgtacaggg 154152

>gb|AC006972.2| Homo sapiens PAC clone RP4-799O8 from 7, complete sequence
          Length = 171537

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 1     aagaaactggaaaagaatt 19
             |||||||||||||||||||
Sbjct: 62521 aagaaactggaaaagaatt 62539

>emb|BX293995.4| Human DNA sequence from clone RP11-143H17 on chromosome X Contains the
             3' end of a novel gene (C6.1A) and a phosphatidylinositol
             binding clathrin assembly protein (PICALM) pseudogene,
             complete sequence
          Length = 74649

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 10    gaaaagaattatcaatcca 28
             |||||||||||||||||||
Sbjct: 11274 gaaaagaattatcaatcca 11292

>gb|AC013791.9| Homo sapiens chromosome 11, clone RP11-19N21, complete sequence
          Length = 174569

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 69     ggctaaggccaaggcggcc 87
              |||||||||||||||||||
Sbjct: 146068 ggctaaggccaaggcggcc 146050

>emb|BX571874.1| Photorhabdus luminescens subsp. laumondii TTO1 complete genome; segment
              16/17
          Length = 349907

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 16     aattatcaatccaacaaca 34
              |||||||||||||||||||
Sbjct: 208705 aattatcaatccaacaaca 208723

>emb|AJ006345.1|HSA6345 Homo sapiens KVLQT1 gene
          Length = 404123

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 69     ggctaaggccaaggcggcc 87
              |||||||||||||||||||
Sbjct: 351240 ggctaaggccaaggcggcc 351258

>gb|AC021424.6| Homo sapiens chromosome 11, clone RP11-38L8, complete sequence
          Length = 181025

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 69    ggctaaggccaaggcggcc 87
             |||||||||||||||||||
Sbjct: 31575 ggctaaggccaaggcggcc 31557

>gb|AC116099.2| Homo sapiens chromosome 1 clone RP11-338F23, complete sequence
          Length = 184007

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 1     aagaaactggaaaagaatt 19
             |||||||||||||||||||
Sbjct: 63778 aagaaactggaaaagaatt 63796

>dbj|AP007155.1| Aspergillus oryzae RIB40 genomic DNA, SC003
          Length = 4170692

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 9     ggaaaagaattatcaatcc 27
             |||||||||||||||||||
Sbjct: 56137 ggaaaagaattatcaatcc 56155

>gb|AC107614.3| Homo sapiens 3 BAC RP11-719A7 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 160917

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 10    gaaaagaattatcaatcca 28
             |||||||||||||||||||
Sbjct: 70188 gaaaagaattatcaatcca 70206

>gb|AC113295.5| Mus musculus chromosome 5, clone RP23-424M12, complete sequence
          Length = 239105

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 62    ctaggaaggctaaggccaa 80
             |||||||||||||||||||
Sbjct: 61927 ctaggaaggctaaggccaa 61909

>gb|AC110556.15| Mus musculus chromosome 5, clone RP23-250G21, complete sequence
          Length = 214445

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 62    ctaggaaggctaaggccaa 80
             |||||||||||||||||||
Sbjct: 62735 ctaggaaggctaaggccaa 62753

>gb|AC073215.5| Homo sapiens BAC clone RP11-501L9 from 2, complete sequence
          Length = 105392

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 9     ggaaaagaattatcaatccaaca 31
             |||||| ||||||||||||||||
Sbjct: 17946 ggaaaaaaattatcaatccaaca 17924

>gb|AC124156.3| Equus caballus clone CH241-280K8, complete sequence
          Length = 184661

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 8      tggaaaagaattatcaatc 26
              |||||||||||||||||||
Sbjct: 154213 tggaaaagaattatcaatc 154195

>dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete genome
          Length = 1849742

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 74     aggccaaggcggcctcccc 92
              |||||||||||||||||||
Sbjct: 383681 aggccaaggcggcctcccc 383663

>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                      
Query: 117     ccagccggacaagcatccagagg 139
               |||||||||||||||||| ||||
Sbjct: 2852105 ccagccggacaagcatcccgagg 2852083

>dbj|AP006628.1| Onion yellows phytoplasma OY-M DNA, complete genome
          Length = 860631

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 2      agaaactggaaaagaatta 20
              |||||||||||||||||||
Sbjct: 666020 agaaactggaaaagaatta 666002

>gb|AC006384.2|AC006384 Homo sapiens BAC clone RP11-557I6 from 7q11.23-q21.1, complete sequence
          Length = 128959

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 1     aagaaactggaaaagaatt 19
             |||||||||||||||||||
Sbjct: 71346 aagaaactggaaaagaatt 71328

>gb|AC159217.3| Pan troglodytes BAC clone CH251-347C9 from chromosome unknown, complete
              sequence
          Length = 173847

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 10     gaaaagaattatcaatcca 28
              |||||||||||||||||||
Sbjct: 160959 gaaaagaattatcaatcca 160941

>emb|CT025701.10| Mouse DNA sequence from clone RP24-68C7 on chromosome 9, complete
              sequence
          Length = 120779

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 2      agaaactggaaaagaatta 20
              |||||||||||||||||||
Sbjct: 109924 agaaactggaaaagaatta 109942

>gb|AY642926.1| Hordeum vulgare BAC CC24_14, complete sequence
          Length = 184425

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 53    cagtaggaactaggaaggc 71
             |||||||||||||||||||
Sbjct: 65244 cagtaggaactaggaaggc 65262

>emb|CT573417.1| Pan troglodytes chromosome X clone PTB-001B13 map Xq28, complete
             sequence
          Length = 117521

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 10    gaaaagaattatcaatcca 28
             |||||||||||||||||||
Sbjct: 79331 gaaaagaattatcaatcca 79313

>gb|AE017221.1| Thermus thermophilus HB27, complete genome
          Length = 1894877

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 74    aggccaaggcggcctcccc 92
             |||||||||||||||||||
Sbjct: 33333 aggccaaggcggcctcccc 33315

>gb|AC003675.1|AC003675 Human Chromosome 11p15.5 P1 - 6959, complete sequence
          Length = 86621

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 69    ggctaaggccaaggcggcc 87
             |||||||||||||||||||
Sbjct: 43297 ggctaaggccaaggcggcc 43315

>gb|AC146299.5| Mus musculus BAC clone RP23-72A20 from 9, complete sequence
          Length = 166132

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 30    caacagtctgtgtacaggg 48
             |||||||||||||||||||
Sbjct: 87183 caacagtctgtgtacaggg 87201

>gb|DP000020.1| Equus caballus target 1 genomic scaffold
          Length = 1907055

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 8      tggaaaagaattatcaatc 26
              |||||||||||||||||||
Sbjct: 816496 tggaaaagaattatcaatc 816478

>emb|AL672099.11| Mouse DNA sequence from clone RP23-379L10 on chromosome X, complete
              sequence
          Length = 181566

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 58     ggaactaggaaggctaagg 76
              |||||||||||||||||||
Sbjct: 133403 ggaactaggaaggctaagg 133421


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,493,460
Number of Sequences: 3902068
Number of extensions: 1493460
Number of successful extensions: 107396
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 107080
Number of HSP's gapped (non-prelim): 316
length of query: 192
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 170
effective length of database: 17,147,199,772
effective search space: 2915023961240
effective search space used: 2915023961240
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)