ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbah61n09
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1gb|BT009272.1| Triticum aestivum clone wlk8.pk0011.e10:fis, full... 904 0.0
2ref|XM_469653.1| Oryza sativa (japonica cultivar-group), mRNA 422 e-115
3dbj|AK061913.1| Oryza sativa (japonica cultivar-group) cDNA clon... 422 e-115
4dbj|AK119226.1| Oryza sativa (japonica cultivar-group) cDNA clon... 422 e-115
5dbj|AK100404.1| Oryza sativa (japonica cultivar-group) cDNA clon... 422 e-115
6dbj|AK060674.1| Oryza sativa (japonica cultivar-group) cDNA clon... 422 e-115
7gb|AY105738.1| Zea mays PCO070960 mRNA sequence 339 6e-90
8gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 176 5e-41
9gb|AC117988.3| Oryza sativa chromosome 3 BAC OSJNBa0057G07 genom... 176 5e-41
10dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 176 5e-41
11gb|AF439728.1|AF439728 Zea mays serine hydroxymethyltransferase ... 149 1e-32
12emb|Z25860.1|FPGHMT2 Flaveria pringlei mRNA for glycine hydroxym... 101 2e-18
13gb|M87649.1|PEASHMTA Pisum sativum serine hydroxymethyltransfera... 100 9e-18
14emb|Z25859.1|FPGHMT1 Flaveria pringlei mRNA for glycine hydroxym... 96 1e-16
15ref|NM_180750.1| Arabidopsis thaliana glycine hydroxymethyltrans... 88 4e-14
16ref|NM_122560.2| Arabidopsis thaliana glycine hydroxymethyltrans... 88 4e-14
17ref|NM_180749.2| Arabidopsis thaliana glycine hydroxymethyltrans... 88 4e-14
18gb|BT001097.1| Arabidopsis thaliana clone C104687 (D) putative g... 88 4e-14
19dbj|AK220785.1| Arabidopsis thaliana mRNA for glycine hydroxymet... 88 4e-14
20emb|BX830710.1|CNS09YQU Arabidopsis thaliana Full-length cDNA Co... 88 4e-14
21gb|BT001113.1| Arabidopsis thaliana clone C104687 (D) putative g... 88 4e-14
22emb|Z25863.1|STGHMT S.tuberosum mRNA for glycine hydroxymethyltr... 80 9e-12
23gb|AY035117.1| Arabidopsis thaliana putative glycine hydroxymeth... 80 9e-12
24ref|NM_119954.2| Arabidopsis thaliana SHM1 (SERINE HYDROXYMETHYL... 64 5e-07
25emb|AL161592.2|ATCHRIV88 Arabidopsis thaliana DNA chromosome 4, ... 64 5e-07
26emb|AL035538.1|ATF20D10 Arabidopsis thaliana DNA chromosome 4, B... 64 5e-07
27emb|AJ271726.1|ATH271726 Arabidopsis thaliana mRNA for serine hy... 64 5e-07
28gb|AY070726.1| Arabidopsis thaliana AT4g37930/F20D10_50 mRNA, co... 64 5e-07
29gb|AY057645.1| Arabidopsis thaliana AT4g37930/F20D10_50 mRNA, co... 64 5e-07
30gb|AF428388.1|AF428388 Arabidopsis thaliana AT4g37930/F20D10_50 ... 64 5e-07
31gb|AY054254.1| Arabidopsis thaliana AT4g37930/F20D10_50 mRNA, co... 64 5e-07
32gb|BT006353.1| Arabidopsis thaliana At4g37930/F20D10_50 gene, co... 64 5e-07
33gb|AF007270.1|F2P16 Arabidopsis thaliana BAC F2P16, complete seq... 64 5e-07
34emb|BX828432.1|CNS0A3VV Arabidopsis thaliana Full-length cDNA Co... 64 5e-07
35gb|AY089107.1| Arabidopsis thaliana clone 33799 mRNA, complete s... 64 5e-07
36dbj|AP004579.1| Lotus japonicus genomic DNA, chromosome 2, clone... 62 2e-06
37dbj|AP004578.1| Lotus japonicus genomic DNA, chromosome 2, clone... 62 2e-06
38gb|BT013569.1| Lycopersicon esculentum clone 132307R, mRNA sequence 52 0.002
39gb|DQ139269.1| Medicago truncatula serine hydroxymethyltransfera... 52 0.002
40gb|AF416481.1|AF416481 Cicer arietinum hydroxymethyl transferase... 46 0.12
41gb|AC129335.4| Mus musculus BAC clone RP23-109H7 from chromosome... 44 0.48
42gb|AC164169.8| Mus musculus 6 BAC RP23-413M4 (Roswell Park Cance... 44 0.48
43gb|AC126010.13| Medicago truncatula clone mth2-20e4, complete se... 44 0.48
44gb|AC153848.5| Mus musculus 6 BAC RP23-111L15 (Roswell Park Canc... 44 0.48
45gb|AC113269.13| Mus musculus chromosome 15, clone RP23-372F2, co... 42 1.9
46emb|AL121870.9|HSB166C10 Human DNA sequence from clone RP13-166C... 42 1.9
47emb|AL031985.10|HS228H13 Human DNA sequence from clone RP1-228H1... 42 1.9
48gb|AC012077.4|AC012077 Homo sapiens BAC clone RP11-524G14 from Y... 42 1.9
49gb|AC110036.8| Mus musculus chromosome 7, clone RP23-254F9, comp... 40 7.4
50gb|AC118627.6| Mus musculus chromosome 15, clone RP24-91E8, comp... 40 7.4
51ref|XM_706572.1| Candida albicans SC5314 serine hydroxymethyl tr... 40 7.4
52ref|XM_745127.1| Aspergillus fumigatus Af293 hypothetical protei... 40 7.4
53emb|Z78199.1|CEK12F2 Caenorhabditis elegans Cosmid K12F2, comple... 40 7.4
54gb|AC116734.14| Mus musculus chromosome 7, clone RP23-359D11, co... 40 7.4
55gb|AC104871.8| Mus musculus chromosome 13, clone RP23-281C23, co... 40 7.4
56emb|X08067.1|CEMYO3 Caenorhabditis elegans myo-3 gene for myosin... 40 7.4
57gb|AC087847.6| Homo sapiens chromosome 8, clone RP11-353D5, comp... 40 7.4
58ref|NM_073664.3| Caenorhabditis elegans MYOsin heavy chain struc... 40 7.4
59gb|AC155267.1| Mus musculus BAC clone RP23-248M19 from chromosom... 40 7.4
60gb|AC087798.10| Homo sapiens 12 BAC RP11-788H18 (Roswell Park Ca... 40 7.4
61dbj|AB010698.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 40 7.4
62gb|AF009965.1|AF009965 Candida albicans serine hydroxymethyl-tra... 40 7.4
63gb|AC009294.8|AC009294 Homo sapiens chromosome 11, clone 579_H_1... 40 7.4
64dbj|AP003460.3| Homo sapiens genomic DNA, chromosome 11 clone:RP... 40 7.4
65gb|BC084962.1| Xenopus laevis hypothetical LOC495440, mRNA (cDNA... 40 7.4
66dbj|AB002815.1| Perilla frutescens mRNA for chalcone synthase, c... 40 7.4

>gb|BT009272.1| Triticum aestivum clone wlk8.pk0011.e10:fis, full insert mRNA
            sequence
          Length = 1878

 Score =  904 bits (456), Expect = 0.0
 Identities = 522/540 (96%), Gaps = 3/540 (0%)
 Strand = Plus / Minus

                                                                        
Query: 11   tatagcatat-agcgaaacatcttacagtatgtgcctgcaataagaaactattgacaaag 69
            |||||||||| |||||| |||||||||||||||||||||||||||||||||| |||||||
Sbjct: 1793 tatagcatatcagcgaagcatcttacagtatgtgcctgcaataagaaactatcgacaaag 1734

                                                                        
Query: 70   ttcccatattctgtaaaatgcttggattccttttacataagatggcgcttcatcatggat 129
            ||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||
Sbjct: 1733 ttcccatattctgtaaaatgcttggattccttttacatatggtggcgcttcatcatggat 1674

                                                                        
Query: 130  ctattgtttacatggacttgtcctcagttgtgcttcctgtttgcttcctt-gctgttgaa 188
            ||||||||||||||||||||||||||| |||||||| ||||||||||||| |||||||||
Sbjct: 1673 ctattgtttacatggacttgtcctcagctgtgcttcttgtttgcttcctttgctgttgaa 1614

                                                                        
Query: 189  acacagcagtgcttagttcttgtacttcatggtctctttctcgaatccgattgttgggaa 248
            |||||||||| ||||||||||||||||||||||||| ||||||||||| |||||||||||
Sbjct: 1613 acacagcagttcttagttcttgtacttcatggtctccttctcgaatccaattgttgggaa 1554

                                                                        
Query: 249  ttgttttgcatattcctccacatcgtggcgaagctttgcaatttcagcttggatgttgct 308
            |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1553 ttgtttcgcatattcctccacatcgtggcgaagctttgcaatttcagcttggatgttgct 1494

                                                                        
Query: 309  gtcggattgcaaagtggcaacaaagtccttcagtttggtacctgctgctgcagctttaac 368
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1493 gtcggattgcaaagtggcaacaaagtccttcagtttggtacctgctgctgcagctttaac 1434

                                                                        
Query: 369  cttcaaagccaagttcactgccgaatcgaagaattcggcaaccttggcgaagtcctcctc 428
            |||||| |||||||||||||||||||||||||| || |||||||||||||||||||||||
Sbjct: 1433 cttcaaggccaagttcactgccgaatcgaagaagtcagcaaccttggcgaagtcctcctc 1374

                                                                        
Query: 429  aacaaatcctcttgatgtaagcgcgggggttcccatcctgatgcctccgggtaccatagc 488
            ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 1373 aacaaatcctcttgatgtaagtgcgggggttcccatcctgatgcctccgggtaccatagc 1314

                                                                        
Query: 489  tgaaacatcaccaggaactgtgtttcttgtttgctgcaatatgcacattttctaaaacct 548
            |||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||
Sbjct: 1313 tgaaacatcaccaggaaccgtg-ttcttgtttgctgcaatatgcacattttctaaaacct 1255



to top

>ref|XM_469653.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2052

 Score =  422 bits (213), Expect = e-115
 Identities = 316/349 (90%), Gaps = 1/349 (0%)
 Strand = Plus / Minus

                                                                        
Query: 200  cttagttcttgtacttcatggtctctttctcgaatccgattgttgggaattgttttgcat 259
            |||||||||||||||||||||| |||||||| || || ||||| ||||| ||||||||||
Sbjct: 1675 cttagttcttgtacttcatggtttctttctcaaacccaattgtggggaactgttttgcat 1616

                                                                        
Query: 260  attcctccacatcgtggcgaagctttgcaatttcagcttggatgttgctgtcggattgca 319
            ||||||||||||| |||||||| |||||||| || | ||| |||||||| || |||||||
Sbjct: 1615 attcctccacatcatggcgaagttttgcaatctcggattgaatgttgctatcagattgca 1556

                                                                        
Query: 320  aagtggcaacaaagtccttcagtttggtacctgctgctgcagctttaaccttcaaagcca 379
            ||||||||||||||||||||||||| || ||  |||||||||| ||||||||||||||||
Sbjct: 1555 aagtggcaacaaagtccttcagttttgttccacctgctgcagccttaaccttcaaagcca 1496

                                                                        
Query: 380  agttcactgccgaatcgaagaattcggcaaccttggcgaagtcctcctcaacaaatcctc 439
            |||||||||| | ||||||||| || |||||||| || ||||||||||||||||||||||
Sbjct: 1495 agttcactgctgcatcgaagaaatcagcaaccttagcaaagtcctcctcaacaaatcctc 1436

                                                                        
Query: 440  ttgatgtaagcgcgggggttcccatcctgatgcctccgggtaccatagctgaaacatcac 499
            |||| || || || ||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 1435 ttgaggtcagtgctggggttcccatcctgatgcctcctggtaccatagctgaaacatcac 1376

                                                             
Query: 500  caggaactgtgtttcttgtttgctgcaatatgcacattttctaaaacct 548
            ||||||||||| ||||||||||||||||| ||||| |||||||||||||
Sbjct: 1375 caggaactgtg-ttcttgtttgctgcaatgtgcacgttttctaaaacct 1328



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 77/91 (84%), Gaps = 2/91 (2%)
 Strand = Plus / Minus

                                                                        
Query: 26   aacatcttacagtatgtgcctgcaataagaaactattgacaaagttcccatattctgtaa 85
            |||||||||||||| ||| || | ||||||| |||||||||||||| ||| |  ||||||
Sbjct: 1876 aacatcttacagtaggtgtctacgataagaa-ctattgacaaagtttccacacgctgtaa 1818

                                           
Query: 86   aatg-cttggattccttttacataagatggc 115
            |||| |  || | ||||||||||||||||||
Sbjct: 1817 aatgccaggggtcccttttacataagatggc 1787



to top

>dbj|AK061913.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-042-A08, full
            insert sequence
          Length = 1402

 Score =  422 bits (213), Expect = e-115
 Identities = 316/349 (90%), Gaps = 1/349 (0%)
 Strand = Plus / Minus

                                                                        
Query: 200  cttagttcttgtacttcatggtctctttctcgaatccgattgttgggaattgttttgcat 259
            |||||||||||||||||||||| |||||||| || || ||||| ||||| ||||||||||
Sbjct: 1128 cttagttcttgtacttcatggtttctttctcaaacccaattgtggggaactgttttgcat 1069

                                                                        
Query: 260  attcctccacatcgtggcgaagctttgcaatttcagcttggatgttgctgtcggattgca 319
            ||||||||||||| |||||||| |||||||| || | ||| |||||||| || |||||||
Sbjct: 1068 attcctccacatcatggcgaagttttgcaatctcggattgaatgttgctatcagattgca 1009

                                                                        
Query: 320  aagtggcaacaaagtccttcagtttggtacctgctgctgcagctttaaccttcaaagcca 379
            ||||||||||||||||||||||||| || ||  |||||||||| ||||||||||||||||
Sbjct: 1008 aagtggcaacaaagtccttcagttttgttccacctgctgcagccttaaccttcaaagcca 949

                                                                        
Query: 380  agttcactgccgaatcgaagaattcggcaaccttggcgaagtcctcctcaacaaatcctc 439
            |||||||||| | ||||||||| || |||||||| || ||||||||||||||||||||||
Sbjct: 948  agttcactgctgcatcgaagaaatcagcaaccttagcaaagtcctcctcaacaaatcctc 889

                                                                        
Query: 440  ttgatgtaagcgcgggggttcccatcctgatgcctccgggtaccatagctgaaacatcac 499
            |||| || || || ||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 888  ttgaggtcagtgctggggttcccatcctgatgcctcctggtaccatagctgaaacatcac 829

                                                             
Query: 500  caggaactgtgtttcttgtttgctgcaatatgcacattttctaaaacct 548
            ||||||||||| ||||||||||||||||| ||||| |||||||||||||
Sbjct: 828  caggaactgtg-ttcttgtttgctgcaatgtgcacgttttctaaaacct 781



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 77/91 (84%), Gaps = 2/91 (2%)
 Strand = Plus / Minus

                                                                        
Query: 26   aacatcttacagtatgtgcctgcaataagaaactattgacaaagttcccatattctgtaa 85
            |||||||||||||| ||| || | ||||||| |||||||||||||| ||| |  ||||||
Sbjct: 1329 aacatcttacagtaggtgtctacgataagaa-ctattgacaaagtttccacacgctgtaa 1271

                                           
Query: 86   aatgcttggattcc-ttttacataagatggc 115
            |||||  ||  ||| ||||||||||||||||
Sbjct: 1270 aatgccaggggtcccttttacataagatggc 1240



to top

>dbj|AK119226.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-100-H12, full
            insert sequence
          Length = 1923

 Score =  422 bits (213), Expect = e-115
 Identities = 316/349 (90%), Gaps = 1/349 (0%)
 Strand = Plus / Minus

                                                                        
Query: 200  cttagttcttgtacttcatggtctctttctcgaatccgattgttgggaattgttttgcat 259
            |||||||||||||||||||||| |||||||| || || ||||| ||||| ||||||||||
Sbjct: 1598 cttagttcttgtacttcatggtttctttctcaaacccaattgtggggaactgttttgcat 1539

                                                                        
Query: 260  attcctccacatcgtggcgaagctttgcaatttcagcttggatgttgctgtcggattgca 319
            ||||||||||||| |||||||| |||||||| || | ||| |||||||| || |||||||
Sbjct: 1538 attcctccacatcatggcgaagttttgcaatctcggattgaatgttgctatcagattgca 1479

                                                                        
Query: 320  aagtggcaacaaagtccttcagtttggtacctgctgctgcagctttaaccttcaaagcca 379
            ||||||||||||||||||||||||| || ||  |||||||||| ||||||||||||||||
Sbjct: 1478 aagtggcaacaaagtccttcagttttgttccacctgctgcagccttaaccttcaaagcca 1419

                                                                        
Query: 380  agttcactgccgaatcgaagaattcggcaaccttggcgaagtcctcctcaacaaatcctc 439
            |||||||||| | ||||||||| || |||||||| || ||||||||||||||||||||||
Sbjct: 1418 agttcactgctgcatcgaagaaatcagcaaccttagcaaagtcctcctcaacaaatcctc 1359

                                                                        
Query: 440  ttgatgtaagcgcgggggttcccatcctgatgcctccgggtaccatagctgaaacatcac 499
            |||| || || || ||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 1358 ttgaggtcagtgctggggttcccatcctgatgcctcctggtaccatagctgaaacatcac 1299

                                                             
Query: 500  caggaactgtgtttcttgtttgctgcaatatgcacattttctaaaacct 548
            ||||||||||| ||||||||||||||||| ||||| |||||||||||||
Sbjct: 1298 caggaactgtg-ttcttgtttgctgcaatgtgcacgttttctaaaacct 1251



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 77/91 (84%), Gaps = 2/91 (2%)
 Strand = Plus / Minus

                                                                        
Query: 26   aacatcttacagtatgtgcctgcaataagaaactattgacaaagttcccatattctgtaa 85
            |||||||||||||| ||| || | ||||||| |||||||||||||| ||| |  ||||||
Sbjct: 1799 aacatcttacagtaggtgtctacgataagaa-ctattgacaaagtttccacacgctgtaa 1741

                                           
Query: 86   aatg-cttggattccttttacataagatggc 115
            |||| |  || | ||||||||||||||||||
Sbjct: 1740 aatgccaggggtcccttttacataagatggc 1710



to top

>dbj|AK100404.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023086P20, full
            insert sequence
          Length = 1976

 Score =  422 bits (213), Expect = e-115
 Identities = 316/349 (90%), Gaps = 1/349 (0%)
 Strand = Plus / Minus

                                                                        
Query: 200  cttagttcttgtacttcatggtctctttctcgaatccgattgttgggaattgttttgcat 259
            |||||||||||||||||||||| |||||||| || || ||||| ||||| ||||||||||
Sbjct: 1599 cttagttcttgtacttcatggtttctttctcaaacccaattgtggggaactgttttgcat 1540

                                                                        
Query: 260  attcctccacatcgtggcgaagctttgcaatttcagcttggatgttgctgtcggattgca 319
            ||||||||||||| |||||||| |||||||| || | ||| |||||||| || |||||||
Sbjct: 1539 attcctccacatcatggcgaagttttgcaatctcggattgaatgttgctatcagattgca 1480

                                                                        
Query: 320  aagtggcaacaaagtccttcagtttggtacctgctgctgcagctttaaccttcaaagcca 379
            ||||||||||||||||||||||||| || ||  |||||||||| ||||||||||||||||
Sbjct: 1479 aagtggcaacaaagtccttcagttttgttccacctgctgcagccttaaccttcaaagcca 1420

                                                                        
Query: 380  agttcactgccgaatcgaagaattcggcaaccttggcgaagtcctcctcaacaaatcctc 439
            |||||||||| | ||||||||| || |||||||| || ||||||||||||||||||||||
Sbjct: 1419 agttcactgctgcatcgaagaaatcagcaaccttagcaaagtcctcctcaacaaatcctc 1360

                                                                        
Query: 440  ttgatgtaagcgcgggggttcccatcctgatgcctccgggtaccatagctgaaacatcac 499
            |||| || || || ||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 1359 ttgaggtcagtgctggggttcccatcctgatgcctcctggtaccatagctgaaacatcac 1300

                                                             
Query: 500  caggaactgtgtttcttgtttgctgcaatatgcacattttctaaaacct 548
            ||||||||||| ||||||||||||||||| ||||| |||||||||||||
Sbjct: 1299 caggaactgtg-ttcttgtttgctgcaatgtgcacgttttctaaaacct 1252



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 77/91 (84%), Gaps = 2/91 (2%)
 Strand = Plus / Minus

                                                                        
Query: 26   aacatcttacagtatgtgcctgcaataagaaactattgacaaagttcccatattctgtaa 85
            |||||||||||||| ||| || | ||||||| |||||||||||||| ||| |  ||||||
Sbjct: 1800 aacatcttacagtaggtgtctacgataagaa-ctattgacaaagtttccacacgctgtaa 1742

                                           
Query: 86   aatg-cttggattccttttacataagatggc 115
            |||| |  || | ||||||||||||||||||
Sbjct: 1741 aatgccaggggtcccttttacataagatggc 1711



to top

>dbj|AK060674.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-029-A01, full
            insert sequence
          Length = 1844

 Score =  422 bits (213), Expect = e-115
 Identities = 316/349 (90%), Gaps = 1/349 (0%)
 Strand = Plus / Minus

                                                                        
Query: 200  cttagttcttgtacttcatggtctctttctcgaatccgattgttgggaattgttttgcat 259
            |||||||||||||||||||||| |||||||| || || ||||| ||||| ||||||||||
Sbjct: 1591 cttagttcttgtacttcatggtttctttctcaaacccaattgtggggaactgttttgcat 1532

                                                                        
Query: 260  attcctccacatcgtggcgaagctttgcaatttcagcttggatgttgctgtcggattgca 319
            ||||||||||||| |||||||| |||||||| || | ||| |||||||| || |||||||
Sbjct: 1531 attcctccacatcatggcgaagttttgcaatctcggattgaatgttgctatcagattgca 1472

                                                                        
Query: 320  aagtggcaacaaagtccttcagtttggtacctgctgctgcagctttaaccttcaaagcca 379
            ||||||||||||||||||||||||| || ||  |||||||||| ||||||||||||||||
Sbjct: 1471 aagtggcaacaaagtccttcagttttgttccacctgctgcagccttaaccttcaaagcca 1412

                                                                        
Query: 380  agttcactgccgaatcgaagaattcggcaaccttggcgaagtcctcctcaacaaatcctc 439
            |||||||||| | ||||||||| || |||||||| || ||||||||||||||||||||||
Sbjct: 1411 agttcactgctgcatcgaagaaatcagcaaccttagcaaagtcctcctcaacaaatcctc 1352

                                                                        
Query: 440  ttgatgtaagcgcgggggttcccatcctgatgcctccgggtaccatagctgaaacatcac 499
            |||| || || || ||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 1351 ttgaggtcagtgctggggttcccatcctgatgcctcctggtaccatagctgaaacatcac 1292

                                                             
Query: 500  caggaactgtgtttcttgtttgctgcaatatgcacattttctaaaacct 548
            ||||||||||| ||||||||||||||||| ||||| |||||||||||||
Sbjct: 1291 caggaactgtg-ttcttgtttgctgcaatgtgcacgttttctaaaacct 1244



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 77/91 (84%), Gaps = 2/91 (2%)
 Strand = Plus / Minus

                                                                        
Query: 26   aacatcttacagtatgtgcctgcaataagaaactattgacaaagttcccatattctgtaa 85
            |||||||||||||| ||| || | ||||||| |||||||||||||| ||| |  ||||||
Sbjct: 1792 aacatcttacagtaggtgtctacgataagaa-ctattgacaaagtttccacacgctgtaa 1734

                                           
Query: 86   aatg-cttggattccttttacataagatggc 115
            |||| |  || | ||||||||||||||||||
Sbjct: 1733 aatgccaggggtcccttttacataagatggc 1703



to top

>gb|AY105738.1| Zea mays PCO070960 mRNA sequence
          Length = 1476

 Score =  339 bits (171), Expect = 6e-90
 Identities = 308/351 (87%), Gaps = 7/351 (1%)
 Strand = Plus / Minus

                                                                        
Query: 201  ttagttcttgtacttcatggtctctttctcgaatccgattgttgggaattgttttgcata 260
            |||||||||||| ||||||||||||||||| ||||| ||||||||||||||||||||| |
Sbjct: 1231 ttagttcttgtatttcatggtctctttctcaaatccaattgttgggaattgttttgcaaa 1172

                                                                        
Query: 261  ttcctccacatcgtggcgaagctttgcaatttcagcttggatgttgctgtcggattgcaa 320
            |||||| ||||| ||||||||||||||||| ||| ||||||||   || || ||||||||
Sbjct: 1171 ttcctctacatcatggcgaagctttgcaatctcaacttggatg---ctatcagattgcaa 1115

                                                                        
Query: 321  agtggcaacaaagtccttcagtttggt---acctgctgctgcagctttaaccttcaaagc 377
            ||||||||||||||||||||| || ||   |||||  | |||||| |||| |||||| ||
Sbjct: 1114 agtggcaacaaagtccttcagctttgttccacctgtcgttgcagccttaatcttcaaggc 1055

                                                                        
Query: 378  caagttcactgccgaatcgaagaattcggcaaccttggcgaagtcctcctcaacaaatcc 437
            ||  |||||||| | ||||||||| || ||||| || ||||| || || |||||||||||
Sbjct: 1054 cagattcactgctgcatcgaagaagtcagcaactttagcgaaatcttcttcaacaaatcc 995

                                                                        
Query: 438  tcttgatgtaagcgcgggggttcccatcctgatgcctccgggtaccatagctgaaacatc 497
            ||| || ||||| || ||||||||||||||||||||||| || |||||||||||||||||
Sbjct: 994  tctcgacgtaagggctggggttcccatcctgatgcctcctggcaccatagctgaaacatc 935

                                                               
Query: 498  accaggaactgtgtttcttgtttgctgcaatatgcacattttctaaaacct 548
            ||||||||||||| |||||||||||||||||||||||| ||||||||||||
Sbjct: 934  accaggaactgtg-ttcttgtttgctgcaatatgcacactttctaaaacct 885



to top

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  176 bits (89), Expect = 5e-41
 Identities = 131/145 (90%)
 Strand = Plus / Minus

                                                                            
Query: 200      cttagttcttgtacttcatggtctctttctcgaatccgattgttgggaattgttttgcat 259
                |||||||||||||||||||||| |||||||| || || ||||| ||||| ||||||||||
Sbjct: 30011320 cttagttcttgtacttcatggtttctttctcaaacccaattgtggggaactgttttgcat 30011261

                                                                            
Query: 260      attcctccacatcgtggcgaagctttgcaatttcagcttggatgttgctgtcggattgca 319
                ||||||||||||| |||||||| |||||||| || | ||| |||||||| || |||||||
Sbjct: 30011260 attcctccacatcatggcgaagttttgcaatctcggattgaatgttgctatcagattgca 30011201

                                         
Query: 320      aagtggcaacaaagtccttcagttt 344
                |||||||||||||||||||||||||
Sbjct: 30011200 aagtggcaacaaagtccttcagttt 30011176



 Score =  137 bits (69), Expect = 4e-29
 Identities = 85/89 (95%), Gaps = 1/89 (1%)
 Strand = Plus / Minus

                                                                            
Query: 460      cccatcctgatgcctccgggtaccatagctgaaacatcaccaggaactgtgtttcttgtt 519
                ||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 30010834 cccatcctgatgcctcctggtaccatagctgaaacatcaccaggaactgtg-ttcttgtt 30010776

                                             
Query: 520      tgctgcaatatgcacattttctaaaacct 548
                ||||||||| ||||| |||||||||||||
Sbjct: 30010775 tgctgcaatgtgcacgttttctaaaacct 30010747



 Score =  129 bits (65), Expect = 1e-26
 Identities = 98/109 (89%)
 Strand = Plus / Minus

                                                                            
Query: 353      ctgctgcagctttaaccttcaaagccaagttcactgccgaatcgaagaattcggcaacct 412
                |||||||||| |||||||||||||||||||||||||| | ||||||||| || |||||||
Sbjct: 30011026 ctgctgcagccttaaccttcaaagccaagttcactgctgcatcgaagaaatcagcaacct 30010967

                                                                 
Query: 413      tggcgaagtcctcctcaacaaatcctcttgatgtaagcgcgggggttcc 461
                | || |||||||||||||||||||||||||| || || || ||||||||
Sbjct: 30010966 tagcaaagtcctcctcaacaaatcctcttgaggtcagtgctggggttcc 30010918



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 77/91 (84%), Gaps = 2/91 (2%)
 Strand = Plus / Minus

                                                                            
Query: 26       aacatcttacagtatgtgcctgcaataagaaactattgacaaagttcccatattctgtaa 85
                |||||||||||||| ||| || | ||||||| |||||||||||||| ||| |  ||||||
Sbjct: 30011757 aacatcttacagtaggtgtctacgataagaa-ctattgacaaagtttccacacgctgtaa 30011699

                                               
Query: 86       aatgcttggattcc-ttttacataagatggc 115
                |||||  ||  ||| ||||||||||||||||
Sbjct: 30011698 aatgccaggggtcccttttacataagatggc 30011668



to top

>gb|AC117988.3| Oryza sativa chromosome 3 BAC OSJNBa0057G07 genomic sequence, complete
             sequence
          Length = 155106

 Score =  176 bits (89), Expect = 5e-41
 Identities = 131/145 (90%)
 Strand = Plus / Plus

                                                                         
Query: 200   cttagttcttgtacttcatggtctctttctcgaatccgattgttgggaattgttttgcat 259
             |||||||||||||||||||||| |||||||| || || ||||| ||||| ||||||||||
Sbjct: 96431 cttagttcttgtacttcatggtttctttctcaaacccaattgtggggaactgttttgcat 96490

                                                                         
Query: 260   attcctccacatcgtggcgaagctttgcaatttcagcttggatgttgctgtcggattgca 319
             ||||||||||||| |||||||| |||||||| || | ||| |||||||| || |||||||
Sbjct: 96491 attcctccacatcatggcgaagttttgcaatctcggattgaatgttgctatcagattgca 96550

                                      
Query: 320   aagtggcaacaaagtccttcagttt 344
             |||||||||||||||||||||||||
Sbjct: 96551 aagtggcaacaaagtccttcagttt 96575



 Score =  137 bits (69), Expect = 4e-29
 Identities = 85/89 (95%), Gaps = 1/89 (1%)
 Strand = Plus / Plus

                                                                         
Query: 460   cccatcctgatgcctccgggtaccatagctgaaacatcaccaggaactgtgtttcttgtt 519
             ||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 96917 cccatcctgatgcctcctggtaccatagctgaaacatcaccaggaactgtg-ttcttgtt 96975

                                          
Query: 520   tgctgcaatatgcacattttctaaaacct 548
             ||||||||| ||||| |||||||||||||
Sbjct: 96976 tgctgcaatgtgcacgttttctaaaacct 97004



 Score =  129 bits (65), Expect = 1e-26
 Identities = 98/109 (89%)
 Strand = Plus / Plus

                                                                         
Query: 353   ctgctgcagctttaaccttcaaagccaagttcactgccgaatcgaagaattcggcaacct 412
             |||||||||| |||||||||||||||||||||||||| | ||||||||| || |||||||
Sbjct: 96725 ctgctgcagccttaaccttcaaagccaagttcactgctgcatcgaagaaatcagcaacct 96784

                                                              
Query: 413   tggcgaagtcctcctcaacaaatcctcttgatgtaagcgcgggggttcc 461
             | || |||||||||||||||||||||||||| || || || ||||||||
Sbjct: 96785 tagcaaagtcctcctcaacaaatcctcttgaggtcagtgctggggttcc 96833



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 77/91 (84%), Gaps = 2/91 (2%)
 Strand = Plus / Plus

                                                                         
Query: 26    aacatcttacagtatgtgcctgcaataagaaactattgacaaagttcccatattctgtaa 85
             |||||||||||||| ||| || | ||||||| |||||||||||||| ||| |  ||||||
Sbjct: 95994 aacatcttacagtaggtgtctacgataagaa-ctattgacaaagtttccacacgctgtaa 96052

                                            
Query: 86    aatg-cttggattccttttacataagatggc 115
             |||| |  || | ||||||||||||||||||
Sbjct: 96053 aatgccaggggtcccttttacataagatggc 96083



to top

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  176 bits (89), Expect = 5e-41
 Identities = 131/145 (90%)
 Strand = Plus / Minus

                                                                            
Query: 200      cttagttcttgtacttcatggtctctttctcgaatccgattgttgggaattgttttgcat 259
                |||||||||||||||||||||| |||||||| || || ||||| ||||| ||||||||||
Sbjct: 30102742 cttagttcttgtacttcatggtttctttctcaaacccaattgtggggaactgttttgcat 30102683

                                                                            
Query: 260      attcctccacatcgtggcgaagctttgcaatttcagcttggatgttgctgtcggattgca 319
                ||||||||||||| |||||||| |||||||| || | ||| |||||||| || |||||||
Sbjct: 30102682 attcctccacatcatggcgaagttttgcaatctcggattgaatgttgctatcagattgca 30102623

                                         
Query: 320      aagtggcaacaaagtccttcagttt 344
                |||||||||||||||||||||||||
Sbjct: 30102622 aagtggcaacaaagtccttcagttt 30102598



 Score =  137 bits (69), Expect = 4e-29
 Identities = 85/89 (95%), Gaps = 1/89 (1%)
 Strand = Plus / Minus

                                                                            
Query: 460      cccatcctgatgcctccgggtaccatagctgaaacatcaccaggaactgtgtttcttgtt 519
                ||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 30102256 cccatcctgatgcctcctggtaccatagctgaaacatcaccaggaactgtg-ttcttgtt 30102198

                                             
Query: 520      tgctgcaatatgcacattttctaaaacct 548
                ||||||||| ||||| |||||||||||||
Sbjct: 30102197 tgctgcaatgtgcacgttttctaaaacct 30102169



 Score =  129 bits (65), Expect = 1e-26
 Identities = 98/109 (89%)
 Strand = Plus / Minus

                                                                            
Query: 353      ctgctgcagctttaaccttcaaagccaagttcactgccgaatcgaagaattcggcaacct 412
                |||||||||| |||||||||||||||||||||||||| | ||||||||| || |||||||
Sbjct: 30102448 ctgctgcagccttaaccttcaaagccaagttcactgctgcatcgaagaaatcagcaacct 30102389

                                                                 
Query: 413      tggcgaagtcctcctcaacaaatcctcttgatgtaagcgcgggggttcc 461
                | || |||||||||||||||||||||||||| || || || ||||||||
Sbjct: 30102388 tagcaaagtcctcctcaacaaatcctcttgaggtcagtgctggggttcc 30102340



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 77/91 (84%), Gaps = 2/91 (2%)
 Strand = Plus / Minus

                                                                            
Query: 26       aacatcttacagtatgtgcctgcaataagaaactattgacaaagttcccatattctgtaa 85
                |||||||||||||| ||| || | ||||||| |||||||||||||| ||| |  ||||||
Sbjct: 30103179 aacatcttacagtaggtgtctacgataagaa-ctattgacaaagtttccacacgctgtaa 30103121

                                               
Query: 86       aatg-cttggattccttttacataagatggc 115
                |||| |  || | ||||||||||||||||||
Sbjct: 30103120 aatgccaggggtcccttttacataagatggc 30103090



to top

>gb|AF439728.1|AF439728 Zea mays serine hydroxymethyltransferase mRNA, partial cds
          Length = 1028

 Score =  149 bits (75), Expect = 1e-32
 Identities = 91/95 (95%), Gaps = 1/95 (1%)
 Strand = Plus / Minus

                                                                        
Query: 454  ggggttcccatcctgatgcctccgggtaccatagctgaaacatcaccaggaactgtgttt 513
            ||||||||||||||||||||||| || |||||||||||||||||||||||||||||| ||
Sbjct: 1025 ggggttcccatcctgatgcctcctggcaccatagctgaaacatcaccaggaactgtg-tt 967

                                               
Query: 514  cttgtttgctgcaatatgcacattttctaaaacct 548
            |||||||||||||||||||||| ||||||||||||
Sbjct: 966  cttgtttgctgcaatatgcacactttctaaaacct 932



to top

>emb|Z25860.1|FPGHMT2 Flaveria pringlei mRNA for glycine hydroxymethyltransferase
          Length = 1779

 Score =  101 bits (51), Expect = 2e-18
 Identities = 81/91 (89%)
 Strand = Plus / Minus

                                                                        
Query: 203  agttcttgtacttcatggtctctttctcgaatccgattgttgggaattgttttgcatatt 262
            |||| ||||| |||||||| |||||||| || |||||||||||||||||||| ||||| |
Sbjct: 1576 agtttttgtatttcatggtttctttctcaaacccgattgttgggaattgtttggcatact 1517

                                           
Query: 263  cctccacatcgtggcgaagctttgcaatttc 293
            ||||||| |||||||| ||||||| ||||||
Sbjct: 1516 cctccacgtcgtggcgtagctttgaaatttc 1486



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 78/93 (83%)
 Strand = Plus / Minus

                                                                        
Query: 421  tcctcctcaacaaatcctcttgatgtaagcgcgggggttcccatcctgatgcctccgggt 480
            ||||| ||||||||||| || || || || || ||||||||||| |||||||| || || 
Sbjct: 1361 tcctcttcaacaaatcccctagaagtgagagcaggggttcccattctgatgccaccagga 1302

                                             
Query: 481  accatagctgaaacatcaccaggaactgtgttt 513
            ||||| || || |||||||||||||| ||||||
Sbjct: 1301 accatggcagacacatcaccaggaacagtgttt 1269



to top

>gb|M87649.1|PEASHMTA Pisum sativum serine hydroxymethyltransferase mRNA, complete cds
          Length = 1803

 Score = 99.6 bits (50), Expect = 9e-18
 Identities = 86/98 (87%)
 Strand = Plus / Minus

                                                                        
Query: 416  cgaagtcctcctcaacaaatcctcttgatgtaagcgcgggggttcccatcctgatgcctc 475
            |||| ||||||||||||||||| ||||| |||||||| || ||||||||||||||||| |
Sbjct: 1363 cgaaatcctcctcaacaaatccccttgaagtaagcgcaggagttcccatcctgatgccac 1304

                                                  
Query: 476  cgggtaccatagctgaaacatcaccaggaactgtgttt 513
            | || |||||||| || ||||| || ||||||||||||
Sbjct: 1303 caggaaccatagcagacacatctcctggaactgtgttt 1266



 Score = 42.1 bits (21), Expect = 1.9
 Identities = 54/65 (83%)
 Strand = Plus / Minus

                                                                        
Query: 208  ttgtacttcatggtctctttctcgaatccgattgttgggaattgttttgcatattcctcc 267
            ||||||||||||||  |||| || || || || ||||| |||||||||||| | ||||| 
Sbjct: 1571 ttgtacttcatggttgctttttcaaaaccaatggttggaaattgttttgcaaactcctca 1512

                 
Query: 268  acatc 272
            |||||
Sbjct: 1511 acatc 1507



to top

>emb|Z25859.1|FPGHMT1 Flaveria pringlei mRNA for glycine hydroxymethyltransferase
          Length = 1746

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 90/104 (86%)
 Strand = Plus / Minus

                                                                        
Query: 200  cttagttcttgtacttcatggtctctttctcgaatccgattgttgggaattgttttgcat 259
            ||||||| ||||| |||||||| |||||||| ||||||||||| ||||||||||| || |
Sbjct: 1588 cttagtttttgtatttcatggtttctttctcaaatccgattgtcgggaattgtttcgcgt 1529

                                                        
Query: 260  attcctccacatcgtggcgaagctttgcaatttcagcttggatg 303
            |||||||||| || ||||| |||||||  ||||| | |||||||
Sbjct: 1528 attcctccacgtcatggcgtagctttgagatttctgattggatg 1485



 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 91/109 (83%)
 Strand = Plus / Minus

                                                                        
Query: 405  ggcaaccttggcgaagtcctcctcaacaaatcctcttgatgtaagcgcgggggttcccat 464
            |||||| || || |||||||| ||||||||||| || || || || || |||||||||||
Sbjct: 1386 ggcaactttagcaaagtcctcttcaacaaatcccctagaggtgagagcaggggttcccat 1327

                                                             
Query: 465  cctgatgcctccgggtaccatagctgaaacatcaccaggaactgtgttt 513
             |||||||| || || ||||| || || |||||||||||||| ||||||
Sbjct: 1326 tctgatgccaccaggaaccatggcagagacatcaccaggaacagtgttt 1278



to top

>ref|NM_180750.1| Arabidopsis thaliana glycine hydroxymethyltransferase AT5G26780
            transcript variant AT5G26780.2 mRNA, complete cds
          Length = 1966

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 93/108 (86%), Gaps = 1/108 (0%)
 Strand = Plus / Minus

                                                                        
Query: 424  tcctcaacaaatcctcttgatgtaagcgcgggggttcccatcctgatgcctccgggtacc 483
            |||||||  |||||||||||||| || || || |||||||| | |||||| ||||| |||
Sbjct: 1483 tcctcaatgaatcctcttgatgtgagggctggtgttcccatacggatgccaccgggaacc 1424

                                                            
Query: 484  atagctgaaacatcaccaggaactgtgtttcttgtttgctgcaatatg 531
            || || ||||||||||||||||| ||  ||||||||||||||||||||
Sbjct: 1423 atggcagaaacatcaccaggaacagt-attcttgtttgctgcaatatg 1377



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 43/49 (87%)
 Strand = Plus / Minus

                                                             
Query: 215  tcatggtctctttctcgaatccgattgttgggaattgttttgcatattc 263
            |||| |||||||||||||| || || ||||||||||| || ||||||||
Sbjct: 1692 tcatcgtctctttctcgaacccaatcgttgggaattgcttagcatattc 1644



to top

>ref|NM_122560.2| Arabidopsis thaliana glycine hydroxymethyltransferase AT5G26780
            transcript variant AT5G26780.3 mRNA, complete cds
          Length = 2072

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 93/108 (86%), Gaps = 1/108 (0%)
 Strand = Plus / Minus

                                                                        
Query: 424  tcctcaacaaatcctcttgatgtaagcgcgggggttcccatcctgatgcctccgggtacc 483
            |||||||  |||||||||||||| || || || |||||||| | |||||| ||||| |||
Sbjct: 1483 tcctcaatgaatcctcttgatgtgagggctggtgttcccatacggatgccaccgggaacc 1424

                                                            
Query: 484  atagctgaaacatcaccaggaactgtgtttcttgtttgctgcaatatg 531
            || || ||||||||||||||||| ||  ||||||||||||||||||||
Sbjct: 1423 atggcagaaacatcaccaggaacagt-attcttgtttgctgcaatatg 1377



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 43/49 (87%)
 Strand = Plus / Minus

                                                             
Query: 215  tcatggtctctttctcgaatccgattgttgggaattgttttgcatattc 263
            |||| |||||||||||||| || || ||||||||||| || ||||||||
Sbjct: 1692 tcatcgtctctttctcgaacccaatcgttgggaattgcttagcatattc 1644



to top

>ref|NM_180749.2| Arabidopsis thaliana glycine hydroxymethyltransferase AT5G26780
            transcript variant AT5G26780.1 mRNA, complete cds
          Length = 1962

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 93/108 (86%), Gaps = 1/108 (0%)
 Strand = Plus / Minus

                                                                        
Query: 424  tcctcaacaaatcctcttgatgtaagcgcgggggttcccatcctgatgcctccgggtacc 483
            |||||||  |||||||||||||| || || || |||||||| | |||||| ||||| |||
Sbjct: 1435 tcctcaatgaatcctcttgatgtgagggctggtgttcccatacggatgccaccgggaacc 1376

                                                            
Query: 484  atagctgaaacatcaccaggaactgtgtttcttgtttgctgcaatatg 531
            || || ||||||||||||||||| ||  ||||||||||||||||||||
Sbjct: 1375 atggcagaaacatcaccaggaacagt-attcttgtttgctgcaatatg 1329



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 43/49 (87%)
 Strand = Plus / Minus

                                                             
Query: 215  tcatggtctctttctcgaatccgattgttgggaattgttttgcatattc 263
            |||| |||||||||||||| || || ||||||||||| || ||||||||
Sbjct: 1644 tcatcgtctctttctcgaacccaatcgttgggaattgcttagcatattc 1596



to top

>gb|BT001097.1| Arabidopsis thaliana clone C104687 (D) putative glycine
            hydroxymethyltransferase (At5g26780) mRNA, complete cds
          Length = 1633

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 93/108 (86%), Gaps = 1/108 (0%)
 Strand = Plus / Minus

                                                                        
Query: 424  tcctcaacaaatcctcttgatgtaagcgcgggggttcccatcctgatgcctccgggtacc 483
            |||||||  |||||||||||||| || || || |||||||| | |||||| ||||| |||
Sbjct: 1379 tcctcaatgaatcctcttgatgtgagggctggtgttcccatacggatgccaccgggaacc 1320

                                                            
Query: 484  atagctgaaacatcaccaggaactgtgtttcttgtttgctgcaatatg 531
            || || ||||||||||||||||| ||  ||||||||||||||||||||
Sbjct: 1319 atggcagaaacatcaccaggaacagt-attcttgtttgctgcaatatg 1273



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 43/49 (87%)
 Strand = Plus / Minus

                                                             
Query: 215  tcatggtctctttctcgaatccgattgttgggaattgttttgcatattc 263
            |||| |||||||||||||| || || ||||||||||| || ||||||||
Sbjct: 1588 tcatcgtctctttctcgaacccaatcgttgggaattgcttagcatattc 1540



to top

>dbj|AK220785.1| Arabidopsis thaliana mRNA for glycine hydroxymethyltransferase
           -like protein, complete cds, clone: RAFL22-26-M08
          Length = 909

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 93/108 (86%), Gaps = 1/108 (0%)
 Strand = Plus / Minus

                                                                       
Query: 424 tcctcaacaaatcctcttgatgtaagcgcgggggttcccatcctgatgcctccgggtacc 483
           |||||||  |||||||||||||| || || || |||||||| | |||||| ||||| |||
Sbjct: 343 tcctcaatgaatcctcttgatgtgagggctggtgttcccatacggatgccaccgggaacc 284

                                                           
Query: 484 atagctgaaacatcaccaggaactgtgtttcttgtttgctgcaatatg 531
           || || ||||||||||||||||| ||  ||||||||||||||||||||
Sbjct: 283 atggcagaaacatcaccaggaacagt-attcttgtttgctgcaatatg 237



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 43/49 (87%)
 Strand = Plus / Minus

                                                            
Query: 215 tcatggtctctttctcgaatccgattgttgggaattgttttgcatattc 263
           |||| |||||||||||||| || || ||||||||||| || ||||||||
Sbjct: 552 tcatcgtctctttctcgaacccaatcgttgggaattgcttagcatattc 504



to top

>emb|BX830710.1|CNS09YQU Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTLS16ZG06 of Adult vegetative tissue of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1960

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 93/108 (86%), Gaps = 1/108 (0%)
 Strand = Plus / Minus

                                                                        
Query: 424  tcctcaacaaatcctcttgatgtaagcgcgggggttcccatcctgatgcctccgggtacc 483
            |||||||  |||||||||||||| || || || |||||||| | |||||| ||||| |||
Sbjct: 1429 tcctcaatgaatcctcttgatgtgagggctggtgttcccatacggatgccaccgggaacc 1370

                                                            
Query: 484  atagctgaaacatcaccaggaactgtgtttcttgtttgctgcaatatg 531
            || || ||||||||||||||||| ||  ||||||||||||||||||||
Sbjct: 1369 atggcagaaacatcaccaggaacagt-attcttgtttgctgcaatatg 1323



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 43/49 (87%)
 Strand = Plus / Minus

                                                             
Query: 215  tcatggtctctttctcgaatccgattgttgggaattgttttgcatattc 263
            |||| |||||||||||||| || || ||||||||||| || ||||||||
Sbjct: 1639 tcatcgtctctttctcgaacccaatcgttgggaattgcttagcatattc 1591



to top

>gb|BT001113.1| Arabidopsis thaliana clone C104687 (D) putative glycine
            hydroxymethyltransferase (At5g26780) mRNA, complete cds
          Length = 1633

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 93/108 (86%), Gaps = 1/108 (0%)
 Strand = Plus / Minus

                                                                        
Query: 424  tcctcaacaaatcctcttgatgtaagcgcgggggttcccatcctgatgcctccgggtacc 483
            |||||||  |||||||||||||| || || || |||||||| | |||||| ||||| |||
Sbjct: 1379 tcctcaatgaatcctcttgatgtgagggctggtgttcccatacggatgccaccgggaacc 1320

                                                            
Query: 484  atagctgaaacatcaccaggaactgtgtttcttgtttgctgcaatatg 531
            || || ||||||||||||||||| ||  ||||||||||||||||||||
Sbjct: 1319 atggcagaaacatcaccaggaacagt-attcttgtttgctgcaatatg 1273



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 43/49 (87%)
 Strand = Plus / Minus

                                                             
Query: 215  tcatggtctctttctcgaatccgattgttgggaattgttttgcatattc 263
            |||| |||||||||||||| || || ||||||||||| || ||||||||
Sbjct: 1588 tcatcgtctctttctcgaacccaatcgttgggaattgcttagcatattc 1540



to top

>emb|Z25863.1|STGHMT S.tuberosum mRNA for glycine hydroxymethyltransferase
          Length = 1745

 Score = 79.8 bits (40), Expect = 9e-12
 Identities = 82/96 (85%)
 Strand = Plus / Minus

                                                                        
Query: 200  cttagttcttgtacttcatggtctctttctcgaatccgattgttgggaattgttttgcat 259
            ||||||| |||||||||||||| |||||||| || || ||||| ||||| || || ||||
Sbjct: 1563 cttagtttttgtacttcatggtttctttctcaaacccaattgtagggaactgcttagcat 1504

                                                
Query: 260  attcctccacatcgtggcgaagctttgcaatttcag 295
            | ||||||||||| || || || |||||||||||||
Sbjct: 1503 actcctccacatcatgacggagttttgcaatttcag 1468



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 64/75 (85%), Gaps = 1/75 (1%)
 Strand = Plus / Minus

                                                                        
Query: 457  gttcccatcctgatgcctccgggtaccatagctgaaacatcaccaggaactgtgtttctt 516
            |||||||| |||||||| || || ||||| || || ||||| |||||||| ||||| |||
Sbjct: 1306 gttcccattctgatgccaccagggaccatggcagatacatctccaggaacggtgtt-ctt 1248

                           
Query: 517  gtttgctgcaatatg 531
            ||| |||||||||||
Sbjct: 1247 gttggctgcaatatg 1233



to top

>gb|AY035117.1| Arabidopsis thaliana putative glycine hydroxymethyltransferase
            (At5g26780) mRNA, complete cds
          Length = 1933

 Score = 79.8 bits (40), Expect = 9e-12
 Identities = 92/108 (85%), Gaps = 1/108 (0%)
 Strand = Plus / Minus

                                                                        
Query: 424  tcctcaacaaatcctcttgatgtaagcgcgggggttcccatcctgatgcctccgggtacc 483
            |||||||  |||||||||||||| || || || ||||||||   |||||| ||||| |||
Sbjct: 1434 tcctcaatgaatcctcttgatgtgagggctggtgttcccatatggatgccaccgggaacc 1375

                                                            
Query: 484  atagctgaaacatcaccaggaactgtgtttcttgtttgctgcaatatg 531
            || || ||||||||||||||||| ||  ||||||||||||||||||||
Sbjct: 1374 atggcagaaacatcaccaggaacagt-attcttgtttgctgcaatatg 1328



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 43/49 (87%)
 Strand = Plus / Minus

                                                             
Query: 215  tcatggtctctttctcgaatccgattgttgggaattgttttgcatattc 263
            |||| |||||||||||||| || || ||||||||||| || ||||||||
Sbjct: 1643 tcatcgtctctttctcgaacccaatcgttgggaattgcttagcatattc 1595



to top

>ref|NM_119954.2| Arabidopsis thaliana SHM1 (SERINE HYDROXYMETHYLTRANSFERASE 1);
            glycine hydroxymethyltransferase AT4G37930 (SHM1) mRNA,
            complete cds
          Length = 1822

 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 44/48 (91%)
 Strand = Plus / Minus

                                                            
Query: 201  ttagttcttgtacttcatggtctctttctcgaatccgattgttgggaa 248
            ||||||||||||||||||||| |||||||| || || |||||||||||
Sbjct: 1677 ttagttcttgtacttcatggtttctttctcaaacccaattgttgggaa 1630



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 97/120 (80%)
 Strand = Plus / Minus

                                                                        
Query: 394  tcgaagaattcggcaaccttggcgaagtcctcctcaacaaatcctcttgatgtaagcgcg 453
            |||||| |||| || || ||||| ||||| ||||||||||| ||||| || || || || 
Sbjct: 1484 tcgaagtattcagctactttggcaaagtcttcctcaacaaagcctctggaagtgagagca 1425

                                                                        
Query: 454  ggggttcccatcctgatgcctccgggtaccatagctgaaacatcaccaggaactgtgttt 513
            || || ||||| ||||| || || || ||||| || |||||||| |||||||| ||||||
Sbjct: 1424 ggagtacccattctgattccaccaggaaccatggcagaaacatctccaggaacagtgttt 1365



to top

>emb|AL161592.2|ATCHRIV88 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 88
          Length = 198493

 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 44/48 (91%)
 Strand = Plus / Plus

                                                              
Query: 201    ttagttcttgtacttcatggtctctttctcgaatccgattgttgggaa 248
              ||||||||||||||||||||| |||||||| || || |||||||||||
Sbjct: 134324 ttagttcttgtacttcatggtttctttctcaaacccaattgttgggaa 134371



to top

>emb|AL035538.1|ATF20D10 Arabidopsis thaliana DNA chromosome 4, BAC clone  F20D10 (ESSA project)
          Length = 147215

 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 44/48 (91%)
 Strand = Plus / Plus

                                                             
Query: 201   ttagttcttgtacttcatggtctctttctcgaatccgattgttgggaa 248
             ||||||||||||||||||||| |||||||| || || |||||||||||
Sbjct: 19909 ttagttcttgtacttcatggtttctttctcaaacccaattgttgggaa 19956



to top

>emb|AJ271726.1|ATH271726 Arabidopsis thaliana mRNA for serine hydroxymethyl transferase (shm1
            gene)
          Length = 1797

 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 44/48 (91%)
 Strand = Plus / Minus

                                                            
Query: 201  ttagttcttgtacttcatggtctctttctcgaatccgattgttgggaa 248
            ||||||||||||||||||||| |||||||| || || |||||||||||
Sbjct: 1653 ttagttcttgtacttcatggtttctttctcaaacccaattgttgggaa 1606



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 97/120 (80%)
 Strand = Plus / Minus

                                                                        
Query: 394  tcgaagaattcggcaaccttggcgaagtcctcctcaacaaatcctcttgatgtaagcgcg 453
            |||||| |||| || || ||||| ||||| ||||||||||| ||||| || || || || 
Sbjct: 1460 tcgaagtattcagctactttggcaaagtcttcctcaacaaagcctctggaagtgagagca 1401

                                                                        
Query: 454  ggggttcccatcctgatgcctccgggtaccatagctgaaacatcaccaggaactgtgttt 513
            || || ||||| ||||| || || || ||||| || |||||||| |||||||| ||||||
Sbjct: 1400 ggagtacccattctgattccaccaggaaccatggcagaaacatctccaggaacagtgttt 1341



to top

>gb|AY070726.1| Arabidopsis thaliana AT4g37930/F20D10_50 mRNA, complete cds
          Length = 1775

 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 44/48 (91%)
 Strand = Plus / Minus

                                                            
Query: 201  ttagttcttgtacttcatggtctctttctcgaatccgattgttgggaa 248
            ||||||||||||||||||||| |||||||| || || |||||||||||
Sbjct: 1661 ttagttcttgtacttcatggtttctttctcaaacccaattgttgggaa 1614



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 97/120 (80%)
 Strand = Plus / Minus

                                                                        
Query: 394  tcgaagaattcggcaaccttggcgaagtcctcctcaacaaatcctcttgatgtaagcgcg 453
            |||||| |||| || || ||||| ||||| ||||||||||| ||||| || || || || 
Sbjct: 1468 tcgaagtattcagctactttggcaaagtcttcctcaacaaagcctctggaagtgagagca 1409

                                                                        
Query: 454  ggggttcccatcctgatgcctccgggtaccatagctgaaacatcaccaggaactgtgttt 513
            || || ||||| ||||| || || || ||||| || |||||||| |||||||| ||||||
Sbjct: 1408 ggagtacccattctgattccaccaggaaccatggcagaaacatctccaggaacagtgttt 1349



to top

>gb|AY057645.1| Arabidopsis thaliana AT4g37930/F20D10_50 mRNA, complete cds
          Length = 1716

 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 44/48 (91%)
 Strand = Plus / Minus

                                                            
Query: 201  ttagttcttgtacttcatggtctctttctcgaatccgattgttgggaa 248
            ||||||||||||||||||||| |||||||| || || |||||||||||
Sbjct: 1607 ttagttcttgtacttcatggtttctttctcaaacccaattgttgggaa 1560



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 97/120 (80%)
 Strand = Plus / Minus

                                                                        
Query: 394  tcgaagaattcggcaaccttggcgaagtcctcctcaacaaatcctcttgatgtaagcgcg 453
            |||||| |||| || || ||||| ||||| ||||||||||| ||||| || || || || 
Sbjct: 1414 tcgaagtattcagctactttggcaaagtcttcctcaacaaagcctctggaagtgagagca 1355

                                                                        
Query: 454  ggggttcccatcctgatgcctccgggtaccatagctgaaacatcaccaggaactgtgttt 513
            || || ||||| ||||| || || || ||||| || |||||||| |||||||| ||||||
Sbjct: 1354 ggagtacccattctgattccaccaggaaccatggcagaaacatctccaggaacagtgttt 1295



to top

>gb|AF428388.1|AF428388 Arabidopsis thaliana AT4g37930/F20D10_50 mRNA, complete cds
          Length = 1730

 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 44/48 (91%)
 Strand = Plus / Minus

                                                            
Query: 201  ttagttcttgtacttcatggtctctttctcgaatccgattgttgggaa 248
            ||||||||||||||||||||| |||||||| || || |||||||||||
Sbjct: 1608 ttagttcttgtacttcatggtttctttctcaaacccaattgttgggaa 1561



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 97/120 (80%)
 Strand = Plus / Minus

                                                                        
Query: 394  tcgaagaattcggcaaccttggcgaagtcctcctcaacaaatcctcttgatgtaagcgcg 453
            |||||| |||| || || ||||| ||||| ||||||||||| ||||| || || || || 
Sbjct: 1415 tcgaagtattcagctactttggcaaagtcttcctcaacaaagcctctggaagtgagagca 1356

                                                                        
Query: 454  ggggttcccatcctgatgcctccgggtaccatagctgaaacatcaccaggaactgtgttt 513
            || || ||||| ||||| || || || ||||| || |||||||| |||||||| ||||||
Sbjct: 1355 ggagtacccattctgattccaccaggaaccatggcagaaacatctccaggaacagtgttt 1296



to top

>gb|AY054254.1| Arabidopsis thaliana AT4g37930/F20D10_50 mRNA, complete cds
          Length = 1770

 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 44/48 (91%)
 Strand = Plus / Minus

                                                            
Query: 201  ttagttcttgtacttcatggtctctttctcgaatccgattgttgggaa 248
            ||||||||||||||||||||| |||||||| || || |||||||||||
Sbjct: 1661 ttagttcttgtacttcatggtttctttctcaaacccaattgttgggaa 1614



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 97/120 (80%)
 Strand = Plus / Minus

                                                                        
Query: 394  tcgaagaattcggcaaccttggcgaagtcctcctcaacaaatcctcttgatgtaagcgcg 453
            |||||| |||| || || ||||| ||||| ||||||||||| ||||| || || || || 
Sbjct: 1468 tcgaagtattcagctactttggcaaagtcttcctcaacaaagcctctggaagtgagagca 1409

                                                                        
Query: 454  ggggttcccatcctgatgcctccgggtaccatagctgaaacatcaccaggaactgtgttt 513
            || || ||||| ||||| || || || ||||| || |||||||| |||||||| ||||||
Sbjct: 1408 ggagtacccattctgattccaccaggaaccatggcagaaacatctccaggaacagtgttt 1349



to top

>gb|BT006353.1| Arabidopsis thaliana At4g37930/F20D10_50 gene, complete cds
          Length = 1554

 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 44/48 (91%)
 Strand = Plus / Minus

                                                            
Query: 201  ttagttcttgtacttcatggtctctttctcgaatccgattgttgggaa 248
            ||||||||||||||||||||| |||||||| || || |||||||||||
Sbjct: 1554 ttagttcttgtacttcatggtttctttctcaaacccaattgttgggaa 1507



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 97/120 (80%)
 Strand = Plus / Minus

                                                                        
Query: 394  tcgaagaattcggcaaccttggcgaagtcctcctcaacaaatcctcttgatgtaagcgcg 453
            |||||| |||| || || ||||| ||||| ||||||||||| ||||| || || || || 
Sbjct: 1361 tcgaagtattcagctactttggcaaagtcttcctcaacaaagcctctggaagtgagagca 1302

                                                                        
Query: 454  ggggttcccatcctgatgcctccgggtaccatagctgaaacatcaccaggaactgtgttt 513
            || || ||||| ||||| || || || ||||| || |||||||| |||||||| ||||||
Sbjct: 1301 ggagtacccattctgattccaccaggaaccatggcagaaacatctccaggaacagtgttt 1242



to top

>gb|AF007270.1|F2P16 Arabidopsis thaliana BAC F2P16, complete sequence
          Length = 110946

 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 57/64 (89%), Gaps = 1/64 (1%)
 Strand = Plus / Minus

                                                                         
Query: 468   gatgcctccgggtaccatagctgaaacatcaccaggaactgtgtttcttgtttgctgcaa 527
             |||||| ||||| ||||| || ||||||||||||||||| ||  ||||||||||||||||
Sbjct: 22521 gatgccaccgggaaccatggcagaaacatcaccaggaacagt-attcttgtttgctgcaa 22463

                 
Query: 528   tatg 531
             ||||
Sbjct: 22462 tatg 22459



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 43/49 (87%)
 Strand = Plus / Minus

                                                              
Query: 215   tcatggtctctttctcgaatccgattgttgggaattgttttgcatattc 263
             |||| |||||||||||||| || || ||||||||||| || ||||||||
Sbjct: 23145 tcatcgtctctttctcgaacccaatcgttgggaattgcttagcatattc 23097



to top

>emb|BX828432.1|CNS0A3VV Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTPGH89ZH08 of Hormone Treated Callus of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1771

 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 44/48 (91%)
 Strand = Plus / Minus

                                                            
Query: 201  ttagttcttgtacttcatggtctctttctcgaatccgattgttgggaa 248
            ||||||||||||||||||||| |||||||| || || |||||||||||
Sbjct: 1650 ttagttcttgtacttcatggtttctttctcaaacccaattgttgggaa 1603



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 97/120 (80%)
 Strand = Plus / Minus

                                                                        
Query: 394  tcgaagaattcggcaaccttggcgaagtcctcctcaacaaatcctcttgatgtaagcgcg 453
            |||||| |||| || || ||||| ||||| ||||||||||| ||||| || || || || 
Sbjct: 1457 tcgaagtattcagctactttggcaaagtcttcctcaacaaagcctctggaagtgagagca 1398

                                                                        
Query: 454  ggggttcccatcctgatgcctccgggtaccatagctgaaacatcaccaggaactgtgttt 513
            || || ||||| ||||| || || || ||||| || |||||||| |||||||| ||||||
Sbjct: 1397 ggagtacccattctgattccaccaggaaccatggcagaaacatctccaggaacagtgttt 1338



to top

>gb|AY089107.1| Arabidopsis thaliana clone 33799 mRNA, complete sequence
          Length = 1725

 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 44/48 (91%)
 Strand = Plus / Minus

                                                            
Query: 201  ttagttcttgtacttcatggtctctttctcgaatccgattgttgggaa 248
            ||||||||||||||||||||| |||||||| || || |||||||||||
Sbjct: 1616 ttagttcttgtacttcatggtttctttctcaaacccaattgttgggaa 1569



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 97/120 (80%)
 Strand = Plus / Minus

                                                                        
Query: 394  tcgaagaattcggcaaccttggcgaagtcctcctcaacaaatcctcttgatgtaagcgcg 453
            |||||| |||| || || ||||| ||||| ||||||||||| ||||| || || || || 
Sbjct: 1423 tcgaagtattcagctactttggcaaagtcttcctcaacaaagcctctggaagtgagagca 1364

                                                                        
Query: 454  ggggttcccatcctgatgcctccgggtaccatagctgaaacatcaccaggaactgtgttt 513
            || || ||||| ||||| || || || ||||| || |||||||| |||||||| ||||||
Sbjct: 1363 ggagtacccattctgattccaccaggaaccatggcagaaacatctccaggaacagtgttt 1304



to top

>dbj|AP004579.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT11E23, TM0557
          Length = 87695

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 70/83 (84%)
 Strand = Plus / Minus

                                                                        
Query: 208  ttgtacttcatggtctctttctcgaatccgattgttgggaattgttttgcatattcctcc 267
            ||||||||||| ||  | ||||| || || || ||||| || ||||| ||||| ||||| 
Sbjct: 7579 ttgtacttcattgttgccttctcaaaaccaatggttggaaactgtttcgcatactcctca 7520

                                   
Query: 268  acatcgtggcgaagctttgcaat 290
            |||||||||||||||||||||||
Sbjct: 7519 acatcgtggcgaagctttgcaat 7497



to top

>dbj|AP004578.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT17H01, TM0541,
             complete sequence
          Length = 110985

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 70/83 (84%)
 Strand = Plus / Minus

                                                                         
Query: 208   ttgtacttcatggtctctttctcgaatccgattgttgggaattgttttgcatattcctcc 267
             ||||||||||| ||  | ||||| || || || ||||| || ||||| ||||| ||||| 
Sbjct: 95182 ttgtacttcattgttgccttctcaaaaccaatggttggaaactgtttcgcatactcctca 95123

                                    
Query: 268   acatcgtggcgaagctttgcaat 290
             |||||||||||||||||||||||
Sbjct: 95122 acatcgtggcgaagctttgcaat 95100



to top

>gb|BT013569.1| Lycopersicon esculentum clone 132307R, mRNA sequence
          Length = 1923

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 93/114 (81%), Gaps = 1/114 (0%)
 Strand = Plus / Minus

                                                                        
Query: 421  tcctcctcaacaaatcctcttgatgtaagcgcgggggttcccatcctgatgcctccgggt 480
            |||||||||||||| ||||| || || || || ||||| ||||| |  ||||| || |||
Sbjct: 1376 tcctcctcaacaaaacctctagaagtgagagctggggtgcccatgcgaatgccaccaggt 1317

                                                                  
Query: 481  accatagctgaaacatcaccaggaactgtgtttcttgtttgctgcaatatgcac 534
            ||||| || || ||||||||||| || ||  ||||| || ||||||||||||||
Sbjct: 1316 accatggcagatacatcaccaggcacagt-attcttattggctgcaatatgcac 1264



 Score = 44.1 bits (22), Expect = 0.48
 Identities = 52/62 (83%)
 Strand = Plus / Minus

                                                                        
Query: 205  ttcttgtacttcatggtctctttctcgaatccgattgttgggaattgttttgcatattcc 264
            |||||||| ||||| || ||||||||||| || |  || ||||||||||| ||||| |||
Sbjct: 1592 ttcttgtatttcattgtttctttctcgaaaccaacagtagggaattgtttggcatagtcc 1533

              
Query: 265  tc 266
            ||
Sbjct: 1532 tc 1531



to top

>gb|DQ139269.1| Medicago truncatula serine hydroxymethyltransferase mRNA, complete
            cds
          Length = 1524

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 74/90 (82%)
 Strand = Plus / Minus

                                                                        
Query: 424  tcctcaacaaatcctcttgatgtaagcgcgggggttcccatcctgatgcctccgggtacc 483
            ||||||||||| || || |||||||| || || |||||||| ||||| ||||| || |||
Sbjct: 1301 tcctcaacaaaacccctagatgtaagagcaggagttcccattctgatccctccaggaacc 1242

                                          
Query: 484  atagctgaaacatcaccaggaactgtgttt 513
            || || || ||||| || ||||| ||||||
Sbjct: 1241 attgcagacacatctcctggaacagtgttt 1212



to top

>gb|AF416481.1|AF416481 Cicer arietinum hydroxymethyl transferase mRNA, partial cds
          Length = 284

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 50/59 (84%)
 Strand = Plus / Minus

                                                                      
Query: 208 ttgtacttcatggtctctttctcgaatccgattgttgggaattgttttgcatattcctc 266
           ||||||||||||||  |||| || || || || ||||| |||||||||||| |||||||
Sbjct: 68  ttgtacttcatggttgctttttcaaaaccaatggttggaaattgttttgcaaattcctc 10



to top

>gb|AC129335.4| Mus musculus BAC clone RP23-109H7 from chromosome 1, complete sequence
          Length = 201274

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 362   ctttaaccttcaaagccaagtt 383
             ||||||||||||||||||||||
Sbjct: 32135 ctttaaccttcaaagccaagtt 32114



to top

>gb|AC164169.8| Mus musculus 6 BAC RP23-413M4 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 209149

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 157    ttgtgcttcctgtttgcttcct 178
              ||||||||||||||||||||||
Sbjct: 194735 ttgtgcttcctgtttgcttcct 194756



to top

>gb|AC126010.13| Medicago truncatula clone mth2-20e4, complete sequence
          Length = 113964

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                               
Query: 416   cgaagtcctcctcaacaaatcctcttgatgtaag 449
             |||| ||||||||||||||||| ||||| |||||
Sbjct: 58456 cgaaatcctcctcaacaaatccccttgaagtaag 58423



 Score = 40.1 bits (20), Expect = 7.4
 Identities = 60/72 (83%), Gaps = 1/72 (1%)
 Strand = Plus / Minus

                                                                         
Query: 460   cccatcctgatgcctccgggtaccatagctgaaacatcaccaggaactgtgtttcttgtt 519
             ||||||||||| || || || |||||||| || ||||| || ||||| |||||| || ||
Sbjct: 58327 cccatcctgataccaccaggaaccatagcagacacatctcctggaacagtgttt-ttatt 58269

                         
Query: 520   tgctgcaatatg 531
              |||||||||||
Sbjct: 58268 agctgcaatatg 58257



to top

>gb|AC153848.5| Mus musculus 6 BAC RP23-111L15 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 187830

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 157   ttgtgcttcctgtttgcttcct 178
             ||||||||||||||||||||||
Sbjct: 54206 ttgtgcttcctgtttgcttcct 54227



to top

>gb|AC113269.13| Mus musculus chromosome 15, clone RP23-372F2, complete sequence
          Length = 202155

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 160   tgcttcctgtttgcttccttgctgt 184
             |||||||||||||||||| ||||||
Sbjct: 70853 tgcttcctgtttgcttccgtgctgt 70877



to top

>emb|AL121870.9|HSB166C10 Human DNA sequence from clone RP13-166C10 on chromosome Xq21.1-21.3,
              complete sequence
          Length = 122049

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 290    tttcagcttggatgttgctgt 310
              |||||||||||||||||||||
Sbjct: 104450 tttcagcttggatgttgctgt 104470



to top

>emb|AL031985.10|HS228H13 Human DNA sequence from clone RP1-228H13 on chromosome 1p34.1-35.3
              Contains the gene for a novel protein, a ribosomal protein
              L21 (RPL21), a ribosomal protein L10a (RPL10A) and the gene
              for a novel zinc finger protein, complete sequence
          Length = 139737

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 158    tgtgcttcctgtttgcttcct 178
              |||||||||||||||||||||
Sbjct: 105621 tgtgcttcctgtttgcttcct 105601



to top

>gb|AC012077.4|AC012077 Homo sapiens BAC clone RP11-524G14 from Y, complete sequence
          Length = 209287

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 290    tttcagcttggatgttgctgt 310
              |||||||||||||||||||||
Sbjct: 169390 tttcagcttggatgttgctgt 169410



to top

>gb|AC110036.8| Mus musculus chromosome 7, clone RP23-254F9, complete sequence
          Length = 185681

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 455    gggttcccatcctgatgcct 474
              ||||||||||||||||||||
Sbjct: 170075 gggttcccatcctgatgcct 170094



to top

>gb|AC118627.6| Mus musculus chromosome 15, clone RP24-91E8, complete sequence
          Length = 256158

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 166   ctgtttgcttccttgctgtt 185
             ||||||||||||||||||||
Sbjct: 85155 ctgtttgcttccttgctgtt 85174



to top

>ref|XM_706572.1| Candida albicans SC5314 serine hydroxymethyl transferase I
            (CaO19.8922), mRNA
          Length = 1482

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 486  agctgaaacatcaccaggaactgtgttt 513
            |||||| |||||||||||||| ||||||
Sbjct: 1221 agctgatacatcaccaggaacggtgttt 1194



to top

>ref|XM_745127.1| Aspergillus fumigatus Af293 hypothetical protein (Afu1g04710)
           partial mRNA
          Length = 1263

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 172 gcttccttgctgttgaaacacagc 195
           |||||||||| |||||||||||||
Sbjct: 35  gcttccttgcagttgaaacacagc 12



to top

>emb|Z78199.1|CEK12F2 Caenorhabditis elegans Cosmid K12F2, complete sequence
          Length = 12999

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 275  ggcgaagctttgcaatttcagctt 298
            |||||||||| |||||||||||||
Sbjct: 7977 ggcgaagcttggcaatttcagctt 8000



to top

>gb|AC116734.14| Mus musculus chromosome 7, clone RP23-359D11, complete sequence
          Length = 217741

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 455   gggttcccatcctgatgcct 474
             ||||||||||||||||||||
Sbjct: 34173 gggttcccatcctgatgcct 34192



to top

>gb|AC104871.8| Mus musculus chromosome 13, clone RP23-281C23, complete sequence
          Length = 165863

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 278   gaagctttgcaatttcagct 297
             ||||||||||||||||||||
Sbjct: 21826 gaagctttgcaatttcagct 21807



to top

>emb|X08067.1|CEMYO3 Caenorhabditis elegans myo-3 gene for myosin heavy chain 3 (MHC-A)
          Length = 11621

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 275  ggcgaagctttgcaatttcagctt 298
            |||||||||| |||||||||||||
Sbjct: 7886 ggcgaagcttggcaatttcagctt 7863



to top

>gb|AC087847.6| Homo sapiens chromosome 8, clone RP11-353D5, complete sequence
          Length = 170722

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 205    ttcttgtacttcatggtctc 224
              ||||||||||||||||||||
Sbjct: 117303 ttcttgtacttcatggtctc 117322



to top

>ref|NM_073664.3| Caenorhabditis elegans MYOsin heavy chain structural genes family
            member (myo-3) (myo-3) mRNA, complete cds
          Length = 6059

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 275  ggcgaagctttgcaatttcagctt 298
            |||||||||| |||||||||||||
Sbjct: 3565 ggcgaagcttggcaatttcagctt 3542



to top

>gb|AC155267.1| Mus musculus BAC clone RP23-248M19 from chromosome 13, complete
             sequence
          Length = 178290

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 278   gaagctttgcaatttcagct 297
             ||||||||||||||||||||
Sbjct: 83245 gaagctttgcaatttcagct 83226



to top

>gb|AC087798.10| Homo sapiens 12 BAC RP11-788H18 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 160095

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 526   aatatgcacattttctaaaa 545
             ||||||||||||||||||||
Sbjct: 37622 aatatgcacattttctaaaa 37641



to top

>dbj|AB010698.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MPL12
          Length = 87434

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 42    tgcctgcaataagaaactat 61
             ||||||||||||||||||||
Sbjct: 54636 tgcctgcaataagaaactat 54617



to top

>gb|AF009965.1|AF009965 Candida albicans serine hydroxymethyl-transferase I (SHM1) gene,
            complete cds
          Length = 2260

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 486  agctgaaacatcaccaggaactgtgttt 513
            |||||| |||||||||||||| ||||||
Sbjct: 1999 agctgatacatcaccaggaacggtgttt 1972



to top

>gb|AC009294.8|AC009294 Homo sapiens chromosome 11, clone 579_H_17, complete sequence
          Length = 211316

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 52     aagaaactattgacaaagtt 71
              ||||||||||||||||||||
Sbjct: 122669 aagaaactattgacaaagtt 122650



to top

>dbj|AP003460.3| Homo sapiens genomic DNA, chromosome 11 clone:RP11-285P16, complete
              sequence
          Length = 171738

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 52     aagaaactattgacaaagtt 71
              ||||||||||||||||||||
Sbjct: 164989 aagaaactattgacaaagtt 165008



to top

>gb|BC084962.1| Xenopus laevis hypothetical LOC495440, mRNA (cDNA clone MGC:84058
           IMAGE:6948237), complete cds
          Length = 6578

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 348 acctgctgctgcagctttaa 367
           ||||||||||||||||||||
Sbjct: 240 acctgctgctgcagctttaa 221



to top

>dbj|AB002815.1| Perilla frutescens mRNA for chalcone synthase, complete cds
          Length = 1449

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 339  cagtttggtacctgctgctg 358
            ||||||||||||||||||||
Sbjct: 1203 cagtttggtacctgctgctg 1222


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,445,500
Number of Sequences: 3902068
Number of extensions: 5445500
Number of successful extensions: 136584
Number of sequences better than 10.0: 66
Number of HSP's better than 10.0 without gapping: 66
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 136315
Number of HSP's gapped (non-prelim): 229
length of query: 548
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 525
effective length of database: 17,143,297,704
effective search space: 9000231294600
effective search space used: 9000231294600
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top