Clone Name | rbah61n09 |
---|---|
Clone Library Name | barley_pub |
>gb|BT009272.1| Triticum aestivum clone wlk8.pk0011.e10:fis, full insert mRNA sequence Length = 1878 Score = 904 bits (456), Expect = 0.0 Identities = 522/540 (96%), Gaps = 3/540 (0%) Strand = Plus / Minus Query: 11 tatagcatat-agcgaaacatcttacagtatgtgcctgcaataagaaactattgacaaag 69 |||||||||| |||||| |||||||||||||||||||||||||||||||||| ||||||| Sbjct: 1793 tatagcatatcagcgaagcatcttacagtatgtgcctgcaataagaaactatcgacaaag 1734 Query: 70 ttcccatattctgtaaaatgcttggattccttttacataagatggcgcttcatcatggat 129 ||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||| Sbjct: 1733 ttcccatattctgtaaaatgcttggattccttttacatatggtggcgcttcatcatggat 1674 Query: 130 ctattgtttacatggacttgtcctcagttgtgcttcctgtttgcttcctt-gctgttgaa 188 ||||||||||||||||||||||||||| |||||||| ||||||||||||| ||||||||| Sbjct: 1673 ctattgtttacatggacttgtcctcagctgtgcttcttgtttgcttcctttgctgttgaa 1614 Query: 189 acacagcagtgcttagttcttgtacttcatggtctctttctcgaatccgattgttgggaa 248 |||||||||| ||||||||||||||||||||||||| ||||||||||| ||||||||||| Sbjct: 1613 acacagcagttcttagttcttgtacttcatggtctccttctcgaatccaattgttgggaa 1554 Query: 249 ttgttttgcatattcctccacatcgtggcgaagctttgcaatttcagcttggatgttgct 308 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1553 ttgtttcgcatattcctccacatcgtggcgaagctttgcaatttcagcttggatgttgct 1494 Query: 309 gtcggattgcaaagtggcaacaaagtccttcagtttggtacctgctgctgcagctttaac 368 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1493 gtcggattgcaaagtggcaacaaagtccttcagtttggtacctgctgctgcagctttaac 1434 Query: 369 cttcaaagccaagttcactgccgaatcgaagaattcggcaaccttggcgaagtcctcctc 428 |||||| |||||||||||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 1433 cttcaaggccaagttcactgccgaatcgaagaagtcagcaaccttggcgaagtcctcctc 1374 Query: 429 aacaaatcctcttgatgtaagcgcgggggttcccatcctgatgcctccgggtaccatagc 488 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 1373 aacaaatcctcttgatgtaagtgcgggggttcccatcctgatgcctccgggtaccatagc 1314 Query: 489 tgaaacatcaccaggaactgtgtttcttgtttgctgcaatatgcacattttctaaaacct 548 |||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| Sbjct: 1313 tgaaacatcaccaggaaccgtg-ttcttgtttgctgcaatatgcacattttctaaaacct 1255
>ref|XM_469653.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2052 Score = 422 bits (213), Expect = e-115 Identities = 316/349 (90%), Gaps = 1/349 (0%) Strand = Plus / Minus Query: 200 cttagttcttgtacttcatggtctctttctcgaatccgattgttgggaattgttttgcat 259 |||||||||||||||||||||| |||||||| || || ||||| ||||| |||||||||| Sbjct: 1675 cttagttcttgtacttcatggtttctttctcaaacccaattgtggggaactgttttgcat 1616 Query: 260 attcctccacatcgtggcgaagctttgcaatttcagcttggatgttgctgtcggattgca 319 ||||||||||||| |||||||| |||||||| || | ||| |||||||| || ||||||| Sbjct: 1615 attcctccacatcatggcgaagttttgcaatctcggattgaatgttgctatcagattgca 1556 Query: 320 aagtggcaacaaagtccttcagtttggtacctgctgctgcagctttaaccttcaaagcca 379 ||||||||||||||||||||||||| || || |||||||||| |||||||||||||||| Sbjct: 1555 aagtggcaacaaagtccttcagttttgttccacctgctgcagccttaaccttcaaagcca 1496 Query: 380 agttcactgccgaatcgaagaattcggcaaccttggcgaagtcctcctcaacaaatcctc 439 |||||||||| | ||||||||| || |||||||| || |||||||||||||||||||||| Sbjct: 1495 agttcactgctgcatcgaagaaatcagcaaccttagcaaagtcctcctcaacaaatcctc 1436 Query: 440 ttgatgtaagcgcgggggttcccatcctgatgcctccgggtaccatagctgaaacatcac 499 |||| || || || ||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 1435 ttgaggtcagtgctggggttcccatcctgatgcctcctggtaccatagctgaaacatcac 1376 Query: 500 caggaactgtgtttcttgtttgctgcaatatgcacattttctaaaacct 548 ||||||||||| ||||||||||||||||| ||||| ||||||||||||| Sbjct: 1375 caggaactgtg-ttcttgtttgctgcaatgtgcacgttttctaaaacct 1328 Score = 54.0 bits (27), Expect = 5e-04 Identities = 77/91 (84%), Gaps = 2/91 (2%) Strand = Plus / Minus Query: 26 aacatcttacagtatgtgcctgcaataagaaactattgacaaagttcccatattctgtaa 85 |||||||||||||| ||| || | ||||||| |||||||||||||| ||| | |||||| Sbjct: 1876 aacatcttacagtaggtgtctacgataagaa-ctattgacaaagtttccacacgctgtaa 1818 Query: 86 aatg-cttggattccttttacataagatggc 115 |||| | || | |||||||||||||||||| Sbjct: 1817 aatgccaggggtcccttttacataagatggc 1787
>dbj|AK061913.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-042-A08, full insert sequence Length = 1402 Score = 422 bits (213), Expect = e-115 Identities = 316/349 (90%), Gaps = 1/349 (0%) Strand = Plus / Minus Query: 200 cttagttcttgtacttcatggtctctttctcgaatccgattgttgggaattgttttgcat 259 |||||||||||||||||||||| |||||||| || || ||||| ||||| |||||||||| Sbjct: 1128 cttagttcttgtacttcatggtttctttctcaaacccaattgtggggaactgttttgcat 1069 Query: 260 attcctccacatcgtggcgaagctttgcaatttcagcttggatgttgctgtcggattgca 319 ||||||||||||| |||||||| |||||||| || | ||| |||||||| || ||||||| Sbjct: 1068 attcctccacatcatggcgaagttttgcaatctcggattgaatgttgctatcagattgca 1009 Query: 320 aagtggcaacaaagtccttcagtttggtacctgctgctgcagctttaaccttcaaagcca 379 ||||||||||||||||||||||||| || || |||||||||| |||||||||||||||| Sbjct: 1008 aagtggcaacaaagtccttcagttttgttccacctgctgcagccttaaccttcaaagcca 949 Query: 380 agttcactgccgaatcgaagaattcggcaaccttggcgaagtcctcctcaacaaatcctc 439 |||||||||| | ||||||||| || |||||||| || |||||||||||||||||||||| Sbjct: 948 agttcactgctgcatcgaagaaatcagcaaccttagcaaagtcctcctcaacaaatcctc 889 Query: 440 ttgatgtaagcgcgggggttcccatcctgatgcctccgggtaccatagctgaaacatcac 499 |||| || || || ||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 888 ttgaggtcagtgctggggttcccatcctgatgcctcctggtaccatagctgaaacatcac 829 Query: 500 caggaactgtgtttcttgtttgctgcaatatgcacattttctaaaacct 548 ||||||||||| ||||||||||||||||| ||||| ||||||||||||| Sbjct: 828 caggaactgtg-ttcttgtttgctgcaatgtgcacgttttctaaaacct 781 Score = 54.0 bits (27), Expect = 5e-04 Identities = 77/91 (84%), Gaps = 2/91 (2%) Strand = Plus / Minus Query: 26 aacatcttacagtatgtgcctgcaataagaaactattgacaaagttcccatattctgtaa 85 |||||||||||||| ||| || | ||||||| |||||||||||||| ||| | |||||| Sbjct: 1329 aacatcttacagtaggtgtctacgataagaa-ctattgacaaagtttccacacgctgtaa 1271 Query: 86 aatgcttggattcc-ttttacataagatggc 115 ||||| || ||| |||||||||||||||| Sbjct: 1270 aatgccaggggtcccttttacataagatggc 1240
>dbj|AK119226.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-100-H12, full insert sequence Length = 1923 Score = 422 bits (213), Expect = e-115 Identities = 316/349 (90%), Gaps = 1/349 (0%) Strand = Plus / Minus Query: 200 cttagttcttgtacttcatggtctctttctcgaatccgattgttgggaattgttttgcat 259 |||||||||||||||||||||| |||||||| || || ||||| ||||| |||||||||| Sbjct: 1598 cttagttcttgtacttcatggtttctttctcaaacccaattgtggggaactgttttgcat 1539 Query: 260 attcctccacatcgtggcgaagctttgcaatttcagcttggatgttgctgtcggattgca 319 ||||||||||||| |||||||| |||||||| || | ||| |||||||| || ||||||| Sbjct: 1538 attcctccacatcatggcgaagttttgcaatctcggattgaatgttgctatcagattgca 1479 Query: 320 aagtggcaacaaagtccttcagtttggtacctgctgctgcagctttaaccttcaaagcca 379 ||||||||||||||||||||||||| || || |||||||||| |||||||||||||||| Sbjct: 1478 aagtggcaacaaagtccttcagttttgttccacctgctgcagccttaaccttcaaagcca 1419 Query: 380 agttcactgccgaatcgaagaattcggcaaccttggcgaagtcctcctcaacaaatcctc 439 |||||||||| | ||||||||| || |||||||| || |||||||||||||||||||||| Sbjct: 1418 agttcactgctgcatcgaagaaatcagcaaccttagcaaagtcctcctcaacaaatcctc 1359 Query: 440 ttgatgtaagcgcgggggttcccatcctgatgcctccgggtaccatagctgaaacatcac 499 |||| || || || ||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 1358 ttgaggtcagtgctggggttcccatcctgatgcctcctggtaccatagctgaaacatcac 1299 Query: 500 caggaactgtgtttcttgtttgctgcaatatgcacattttctaaaacct 548 ||||||||||| ||||||||||||||||| ||||| ||||||||||||| Sbjct: 1298 caggaactgtg-ttcttgtttgctgcaatgtgcacgttttctaaaacct 1251 Score = 54.0 bits (27), Expect = 5e-04 Identities = 77/91 (84%), Gaps = 2/91 (2%) Strand = Plus / Minus Query: 26 aacatcttacagtatgtgcctgcaataagaaactattgacaaagttcccatattctgtaa 85 |||||||||||||| ||| || | ||||||| |||||||||||||| ||| | |||||| Sbjct: 1799 aacatcttacagtaggtgtctacgataagaa-ctattgacaaagtttccacacgctgtaa 1741 Query: 86 aatg-cttggattccttttacataagatggc 115 |||| | || | |||||||||||||||||| Sbjct: 1740 aatgccaggggtcccttttacataagatggc 1710
>dbj|AK100404.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023086P20, full insert sequence Length = 1976 Score = 422 bits (213), Expect = e-115 Identities = 316/349 (90%), Gaps = 1/349 (0%) Strand = Plus / Minus Query: 200 cttagttcttgtacttcatggtctctttctcgaatccgattgttgggaattgttttgcat 259 |||||||||||||||||||||| |||||||| || || ||||| ||||| |||||||||| Sbjct: 1599 cttagttcttgtacttcatggtttctttctcaaacccaattgtggggaactgttttgcat 1540 Query: 260 attcctccacatcgtggcgaagctttgcaatttcagcttggatgttgctgtcggattgca 319 ||||||||||||| |||||||| |||||||| || | ||| |||||||| || ||||||| Sbjct: 1539 attcctccacatcatggcgaagttttgcaatctcggattgaatgttgctatcagattgca 1480 Query: 320 aagtggcaacaaagtccttcagtttggtacctgctgctgcagctttaaccttcaaagcca 379 ||||||||||||||||||||||||| || || |||||||||| |||||||||||||||| Sbjct: 1479 aagtggcaacaaagtccttcagttttgttccacctgctgcagccttaaccttcaaagcca 1420 Query: 380 agttcactgccgaatcgaagaattcggcaaccttggcgaagtcctcctcaacaaatcctc 439 |||||||||| | ||||||||| || |||||||| || |||||||||||||||||||||| Sbjct: 1419 agttcactgctgcatcgaagaaatcagcaaccttagcaaagtcctcctcaacaaatcctc 1360 Query: 440 ttgatgtaagcgcgggggttcccatcctgatgcctccgggtaccatagctgaaacatcac 499 |||| || || || ||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 1359 ttgaggtcagtgctggggttcccatcctgatgcctcctggtaccatagctgaaacatcac 1300 Query: 500 caggaactgtgtttcttgtttgctgcaatatgcacattttctaaaacct 548 ||||||||||| ||||||||||||||||| ||||| ||||||||||||| Sbjct: 1299 caggaactgtg-ttcttgtttgctgcaatgtgcacgttttctaaaacct 1252 Score = 54.0 bits (27), Expect = 5e-04 Identities = 77/91 (84%), Gaps = 2/91 (2%) Strand = Plus / Minus Query: 26 aacatcttacagtatgtgcctgcaataagaaactattgacaaagttcccatattctgtaa 85 |||||||||||||| ||| || | ||||||| |||||||||||||| ||| | |||||| Sbjct: 1800 aacatcttacagtaggtgtctacgataagaa-ctattgacaaagtttccacacgctgtaa 1742 Query: 86 aatg-cttggattccttttacataagatggc 115 |||| | || | |||||||||||||||||| Sbjct: 1741 aatgccaggggtcccttttacataagatggc 1711
>dbj|AK060674.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-029-A01, full insert sequence Length = 1844 Score = 422 bits (213), Expect = e-115 Identities = 316/349 (90%), Gaps = 1/349 (0%) Strand = Plus / Minus Query: 200 cttagttcttgtacttcatggtctctttctcgaatccgattgttgggaattgttttgcat 259 |||||||||||||||||||||| |||||||| || || ||||| ||||| |||||||||| Sbjct: 1591 cttagttcttgtacttcatggtttctttctcaaacccaattgtggggaactgttttgcat 1532 Query: 260 attcctccacatcgtggcgaagctttgcaatttcagcttggatgttgctgtcggattgca 319 ||||||||||||| |||||||| |||||||| || | ||| |||||||| || ||||||| Sbjct: 1531 attcctccacatcatggcgaagttttgcaatctcggattgaatgttgctatcagattgca 1472 Query: 320 aagtggcaacaaagtccttcagtttggtacctgctgctgcagctttaaccttcaaagcca 379 ||||||||||||||||||||||||| || || |||||||||| |||||||||||||||| Sbjct: 1471 aagtggcaacaaagtccttcagttttgttccacctgctgcagccttaaccttcaaagcca 1412 Query: 380 agttcactgccgaatcgaagaattcggcaaccttggcgaagtcctcctcaacaaatcctc 439 |||||||||| | ||||||||| || |||||||| || |||||||||||||||||||||| Sbjct: 1411 agttcactgctgcatcgaagaaatcagcaaccttagcaaagtcctcctcaacaaatcctc 1352 Query: 440 ttgatgtaagcgcgggggttcccatcctgatgcctccgggtaccatagctgaaacatcac 499 |||| || || || ||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 1351 ttgaggtcagtgctggggttcccatcctgatgcctcctggtaccatagctgaaacatcac 1292 Query: 500 caggaactgtgtttcttgtttgctgcaatatgcacattttctaaaacct 548 ||||||||||| ||||||||||||||||| ||||| ||||||||||||| Sbjct: 1291 caggaactgtg-ttcttgtttgctgcaatgtgcacgttttctaaaacct 1244 Score = 54.0 bits (27), Expect = 5e-04 Identities = 77/91 (84%), Gaps = 2/91 (2%) Strand = Plus / Minus Query: 26 aacatcttacagtatgtgcctgcaataagaaactattgacaaagttcccatattctgtaa 85 |||||||||||||| ||| || | ||||||| |||||||||||||| ||| | |||||| Sbjct: 1792 aacatcttacagtaggtgtctacgataagaa-ctattgacaaagtttccacacgctgtaa 1734 Query: 86 aatg-cttggattccttttacataagatggc 115 |||| | || | |||||||||||||||||| Sbjct: 1733 aatgccaggggtcccttttacataagatggc 1703
>gb|AY105738.1| Zea mays PCO070960 mRNA sequence Length = 1476 Score = 339 bits (171), Expect = 6e-90 Identities = 308/351 (87%), Gaps = 7/351 (1%) Strand = Plus / Minus Query: 201 ttagttcttgtacttcatggtctctttctcgaatccgattgttgggaattgttttgcata 260 |||||||||||| ||||||||||||||||| ||||| ||||||||||||||||||||| | Sbjct: 1231 ttagttcttgtatttcatggtctctttctcaaatccaattgttgggaattgttttgcaaa 1172 Query: 261 ttcctccacatcgtggcgaagctttgcaatttcagcttggatgttgctgtcggattgcaa 320 |||||| ||||| ||||||||||||||||| ||| |||||||| || || |||||||| Sbjct: 1171 ttcctctacatcatggcgaagctttgcaatctcaacttggatg---ctatcagattgcaa 1115 Query: 321 agtggcaacaaagtccttcagtttggt---acctgctgctgcagctttaaccttcaaagc 377 ||||||||||||||||||||| || || ||||| | |||||| |||| |||||| || Sbjct: 1114 agtggcaacaaagtccttcagctttgttccacctgtcgttgcagccttaatcttcaaggc 1055 Query: 378 caagttcactgccgaatcgaagaattcggcaaccttggcgaagtcctcctcaacaaatcc 437 || |||||||| | ||||||||| || ||||| || ||||| || || ||||||||||| Sbjct: 1054 cagattcactgctgcatcgaagaagtcagcaactttagcgaaatcttcttcaacaaatcc 995 Query: 438 tcttgatgtaagcgcgggggttcccatcctgatgcctccgggtaccatagctgaaacatc 497 ||| || ||||| || ||||||||||||||||||||||| || ||||||||||||||||| Sbjct: 994 tctcgacgtaagggctggggttcccatcctgatgcctcctggcaccatagctgaaacatc 935 Query: 498 accaggaactgtgtttcttgtttgctgcaatatgcacattttctaaaacct 548 ||||||||||||| |||||||||||||||||||||||| |||||||||||| Sbjct: 934 accaggaactgtg-ttcttgtttgctgcaatatgcacactttctaaaacct 885
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 176 bits (89), Expect = 5e-41 Identities = 131/145 (90%) Strand = Plus / Minus Query: 200 cttagttcttgtacttcatggtctctttctcgaatccgattgttgggaattgttttgcat 259 |||||||||||||||||||||| |||||||| || || ||||| ||||| |||||||||| Sbjct: 30011320 cttagttcttgtacttcatggtttctttctcaaacccaattgtggggaactgttttgcat 30011261 Query: 260 attcctccacatcgtggcgaagctttgcaatttcagcttggatgttgctgtcggattgca 319 ||||||||||||| |||||||| |||||||| || | ||| |||||||| || ||||||| Sbjct: 30011260 attcctccacatcatggcgaagttttgcaatctcggattgaatgttgctatcagattgca 30011201 Query: 320 aagtggcaacaaagtccttcagttt 344 ||||||||||||||||||||||||| Sbjct: 30011200 aagtggcaacaaagtccttcagttt 30011176 Score = 137 bits (69), Expect = 4e-29 Identities = 85/89 (95%), Gaps = 1/89 (1%) Strand = Plus / Minus Query: 460 cccatcctgatgcctccgggtaccatagctgaaacatcaccaggaactgtgtttcttgtt 519 ||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||| Sbjct: 30010834 cccatcctgatgcctcctggtaccatagctgaaacatcaccaggaactgtg-ttcttgtt 30010776 Query: 520 tgctgcaatatgcacattttctaaaacct 548 ||||||||| ||||| ||||||||||||| Sbjct: 30010775 tgctgcaatgtgcacgttttctaaaacct 30010747 Score = 129 bits (65), Expect = 1e-26 Identities = 98/109 (89%) Strand = Plus / Minus Query: 353 ctgctgcagctttaaccttcaaagccaagttcactgccgaatcgaagaattcggcaacct 412 |||||||||| |||||||||||||||||||||||||| | ||||||||| || ||||||| Sbjct: 30011026 ctgctgcagccttaaccttcaaagccaagttcactgctgcatcgaagaaatcagcaacct 30010967 Query: 413 tggcgaagtcctcctcaacaaatcctcttgatgtaagcgcgggggttcc 461 | || |||||||||||||||||||||||||| || || || |||||||| Sbjct: 30010966 tagcaaagtcctcctcaacaaatcctcttgaggtcagtgctggggttcc 30010918 Score = 54.0 bits (27), Expect = 5e-04 Identities = 77/91 (84%), Gaps = 2/91 (2%) Strand = Plus / Minus Query: 26 aacatcttacagtatgtgcctgcaataagaaactattgacaaagttcccatattctgtaa 85 |||||||||||||| ||| || | ||||||| |||||||||||||| ||| | |||||| Sbjct: 30011757 aacatcttacagtaggtgtctacgataagaa-ctattgacaaagtttccacacgctgtaa 30011699 Query: 86 aatgcttggattcc-ttttacataagatggc 115 ||||| || ||| |||||||||||||||| Sbjct: 30011698 aatgccaggggtcccttttacataagatggc 30011668
>gb|AC117988.3| Oryza sativa chromosome 3 BAC OSJNBa0057G07 genomic sequence, complete sequence Length = 155106 Score = 176 bits (89), Expect = 5e-41 Identities = 131/145 (90%) Strand = Plus / Plus Query: 200 cttagttcttgtacttcatggtctctttctcgaatccgattgttgggaattgttttgcat 259 |||||||||||||||||||||| |||||||| || || ||||| ||||| |||||||||| Sbjct: 96431 cttagttcttgtacttcatggtttctttctcaaacccaattgtggggaactgttttgcat 96490 Query: 260 attcctccacatcgtggcgaagctttgcaatttcagcttggatgttgctgtcggattgca 319 ||||||||||||| |||||||| |||||||| || | ||| |||||||| || ||||||| Sbjct: 96491 attcctccacatcatggcgaagttttgcaatctcggattgaatgttgctatcagattgca 96550 Query: 320 aagtggcaacaaagtccttcagttt 344 ||||||||||||||||||||||||| Sbjct: 96551 aagtggcaacaaagtccttcagttt 96575 Score = 137 bits (69), Expect = 4e-29 Identities = 85/89 (95%), Gaps = 1/89 (1%) Strand = Plus / Plus Query: 460 cccatcctgatgcctccgggtaccatagctgaaacatcaccaggaactgtgtttcttgtt 519 ||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||| Sbjct: 96917 cccatcctgatgcctcctggtaccatagctgaaacatcaccaggaactgtg-ttcttgtt 96975 Query: 520 tgctgcaatatgcacattttctaaaacct 548 ||||||||| ||||| ||||||||||||| Sbjct: 96976 tgctgcaatgtgcacgttttctaaaacct 97004 Score = 129 bits (65), Expect = 1e-26 Identities = 98/109 (89%) Strand = Plus / Plus Query: 353 ctgctgcagctttaaccttcaaagccaagttcactgccgaatcgaagaattcggcaacct 412 |||||||||| |||||||||||||||||||||||||| | ||||||||| || ||||||| Sbjct: 96725 ctgctgcagccttaaccttcaaagccaagttcactgctgcatcgaagaaatcagcaacct 96784 Query: 413 tggcgaagtcctcctcaacaaatcctcttgatgtaagcgcgggggttcc 461 | || |||||||||||||||||||||||||| || || || |||||||| Sbjct: 96785 tagcaaagtcctcctcaacaaatcctcttgaggtcagtgctggggttcc 96833 Score = 54.0 bits (27), Expect = 5e-04 Identities = 77/91 (84%), Gaps = 2/91 (2%) Strand = Plus / Plus Query: 26 aacatcttacagtatgtgcctgcaataagaaactattgacaaagttcccatattctgtaa 85 |||||||||||||| ||| || | ||||||| |||||||||||||| ||| | |||||| Sbjct: 95994 aacatcttacagtaggtgtctacgataagaa-ctattgacaaagtttccacacgctgtaa 96052 Query: 86 aatg-cttggattccttttacataagatggc 115 |||| | || | |||||||||||||||||| Sbjct: 96053 aatgccaggggtcccttttacataagatggc 96083
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 176 bits (89), Expect = 5e-41 Identities = 131/145 (90%) Strand = Plus / Minus Query: 200 cttagttcttgtacttcatggtctctttctcgaatccgattgttgggaattgttttgcat 259 |||||||||||||||||||||| |||||||| || || ||||| ||||| |||||||||| Sbjct: 30102742 cttagttcttgtacttcatggtttctttctcaaacccaattgtggggaactgttttgcat 30102683 Query: 260 attcctccacatcgtggcgaagctttgcaatttcagcttggatgttgctgtcggattgca 319 ||||||||||||| |||||||| |||||||| || | ||| |||||||| || ||||||| Sbjct: 30102682 attcctccacatcatggcgaagttttgcaatctcggattgaatgttgctatcagattgca 30102623 Query: 320 aagtggcaacaaagtccttcagttt 344 ||||||||||||||||||||||||| Sbjct: 30102622 aagtggcaacaaagtccttcagttt 30102598 Score = 137 bits (69), Expect = 4e-29 Identities = 85/89 (95%), Gaps = 1/89 (1%) Strand = Plus / Minus Query: 460 cccatcctgatgcctccgggtaccatagctgaaacatcaccaggaactgtgtttcttgtt 519 ||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||| Sbjct: 30102256 cccatcctgatgcctcctggtaccatagctgaaacatcaccaggaactgtg-ttcttgtt 30102198 Query: 520 tgctgcaatatgcacattttctaaaacct 548 ||||||||| ||||| ||||||||||||| Sbjct: 30102197 tgctgcaatgtgcacgttttctaaaacct 30102169 Score = 129 bits (65), Expect = 1e-26 Identities = 98/109 (89%) Strand = Plus / Minus Query: 353 ctgctgcagctttaaccttcaaagccaagttcactgccgaatcgaagaattcggcaacct 412 |||||||||| |||||||||||||||||||||||||| | ||||||||| || ||||||| Sbjct: 30102448 ctgctgcagccttaaccttcaaagccaagttcactgctgcatcgaagaaatcagcaacct 30102389 Query: 413 tggcgaagtcctcctcaacaaatcctcttgatgtaagcgcgggggttcc 461 | || |||||||||||||||||||||||||| || || || |||||||| Sbjct: 30102388 tagcaaagtcctcctcaacaaatcctcttgaggtcagtgctggggttcc 30102340 Score = 54.0 bits (27), Expect = 5e-04 Identities = 77/91 (84%), Gaps = 2/91 (2%) Strand = Plus / Minus Query: 26 aacatcttacagtatgtgcctgcaataagaaactattgacaaagttcccatattctgtaa 85 |||||||||||||| ||| || | ||||||| |||||||||||||| ||| | |||||| Sbjct: 30103179 aacatcttacagtaggtgtctacgataagaa-ctattgacaaagtttccacacgctgtaa 30103121 Query: 86 aatg-cttggattccttttacataagatggc 115 |||| | || | |||||||||||||||||| Sbjct: 30103120 aatgccaggggtcccttttacataagatggc 30103090
>gb|AF439728.1|AF439728 Zea mays serine hydroxymethyltransferase mRNA, partial cds Length = 1028 Score = 149 bits (75), Expect = 1e-32 Identities = 91/95 (95%), Gaps = 1/95 (1%) Strand = Plus / Minus Query: 454 ggggttcccatcctgatgcctccgggtaccatagctgaaacatcaccaggaactgtgttt 513 ||||||||||||||||||||||| || |||||||||||||||||||||||||||||| || Sbjct: 1025 ggggttcccatcctgatgcctcctggcaccatagctgaaacatcaccaggaactgtg-tt 967 Query: 514 cttgtttgctgcaatatgcacattttctaaaacct 548 |||||||||||||||||||||| |||||||||||| Sbjct: 966 cttgtttgctgcaatatgcacactttctaaaacct 932
>emb|Z25860.1|FPGHMT2 Flaveria pringlei mRNA for glycine hydroxymethyltransferase Length = 1779 Score = 101 bits (51), Expect = 2e-18 Identities = 81/91 (89%) Strand = Plus / Minus Query: 203 agttcttgtacttcatggtctctttctcgaatccgattgttgggaattgttttgcatatt 262 |||| ||||| |||||||| |||||||| || |||||||||||||||||||| ||||| | Sbjct: 1576 agtttttgtatttcatggtttctttctcaaacccgattgttgggaattgtttggcatact 1517 Query: 263 cctccacatcgtggcgaagctttgcaatttc 293 ||||||| |||||||| ||||||| |||||| Sbjct: 1516 cctccacgtcgtggcgtagctttgaaatttc 1486 Score = 65.9 bits (33), Expect = 1e-07 Identities = 78/93 (83%) Strand = Plus / Minus Query: 421 tcctcctcaacaaatcctcttgatgtaagcgcgggggttcccatcctgatgcctccgggt 480 ||||| ||||||||||| || || || || || ||||||||||| |||||||| || || Sbjct: 1361 tcctcttcaacaaatcccctagaagtgagagcaggggttcccattctgatgccaccagga 1302 Query: 481 accatagctgaaacatcaccaggaactgtgttt 513 ||||| || || |||||||||||||| |||||| Sbjct: 1301 accatggcagacacatcaccaggaacagtgttt 1269
>gb|M87649.1|PEASHMTA Pisum sativum serine hydroxymethyltransferase mRNA, complete cds Length = 1803 Score = 99.6 bits (50), Expect = 9e-18 Identities = 86/98 (87%) Strand = Plus / Minus Query: 416 cgaagtcctcctcaacaaatcctcttgatgtaagcgcgggggttcccatcctgatgcctc 475 |||| ||||||||||||||||| ||||| |||||||| || ||||||||||||||||| | Sbjct: 1363 cgaaatcctcctcaacaaatccccttgaagtaagcgcaggagttcccatcctgatgccac 1304 Query: 476 cgggtaccatagctgaaacatcaccaggaactgtgttt 513 | || |||||||| || ||||| || |||||||||||| Sbjct: 1303 caggaaccatagcagacacatctcctggaactgtgttt 1266 Score = 42.1 bits (21), Expect = 1.9 Identities = 54/65 (83%) Strand = Plus / Minus Query: 208 ttgtacttcatggtctctttctcgaatccgattgttgggaattgttttgcatattcctcc 267 |||||||||||||| |||| || || || || ||||| |||||||||||| | ||||| Sbjct: 1571 ttgtacttcatggttgctttttcaaaaccaatggttggaaattgttttgcaaactcctca 1512 Query: 268 acatc 272 ||||| Sbjct: 1511 acatc 1507
>emb|Z25859.1|FPGHMT1 Flaveria pringlei mRNA for glycine hydroxymethyltransferase Length = 1746 Score = 95.6 bits (48), Expect = 1e-16 Identities = 90/104 (86%) Strand = Plus / Minus Query: 200 cttagttcttgtacttcatggtctctttctcgaatccgattgttgggaattgttttgcat 259 ||||||| ||||| |||||||| |||||||| ||||||||||| ||||||||||| || | Sbjct: 1588 cttagtttttgtatttcatggtttctttctcaaatccgattgtcgggaattgtttcgcgt 1529 Query: 260 attcctccacatcgtggcgaagctttgcaatttcagcttggatg 303 |||||||||| || ||||| ||||||| ||||| | ||||||| Sbjct: 1528 attcctccacgtcatggcgtagctttgagatttctgattggatg 1485 Score = 73.8 bits (37), Expect = 5e-10 Identities = 91/109 (83%) Strand = Plus / Minus Query: 405 ggcaaccttggcgaagtcctcctcaacaaatcctcttgatgtaagcgcgggggttcccat 464 |||||| || || |||||||| ||||||||||| || || || || || ||||||||||| Sbjct: 1386 ggcaactttagcaaagtcctcttcaacaaatcccctagaggtgagagcaggggttcccat 1327 Query: 465 cctgatgcctccgggtaccatagctgaaacatcaccaggaactgtgttt 513 |||||||| || || ||||| || || |||||||||||||| |||||| Sbjct: 1326 tctgatgccaccaggaaccatggcagagacatcaccaggaacagtgttt 1278
>ref|NM_180750.1| Arabidopsis thaliana glycine hydroxymethyltransferase AT5G26780 transcript variant AT5G26780.2 mRNA, complete cds Length = 1966 Score = 87.7 bits (44), Expect = 4e-14 Identities = 93/108 (86%), Gaps = 1/108 (0%) Strand = Plus / Minus Query: 424 tcctcaacaaatcctcttgatgtaagcgcgggggttcccatcctgatgcctccgggtacc 483 ||||||| |||||||||||||| || || || |||||||| | |||||| ||||| ||| Sbjct: 1483 tcctcaatgaatcctcttgatgtgagggctggtgttcccatacggatgccaccgggaacc 1424 Query: 484 atagctgaaacatcaccaggaactgtgtttcttgtttgctgcaatatg 531 || || ||||||||||||||||| || |||||||||||||||||||| Sbjct: 1423 atggcagaaacatcaccaggaacagt-attcttgtttgctgcaatatg 1377 Score = 50.1 bits (25), Expect = 0.008 Identities = 43/49 (87%) Strand = Plus / Minus Query: 215 tcatggtctctttctcgaatccgattgttgggaattgttttgcatattc 263 |||| |||||||||||||| || || ||||||||||| || |||||||| Sbjct: 1692 tcatcgtctctttctcgaacccaatcgttgggaattgcttagcatattc 1644
>ref|NM_122560.2| Arabidopsis thaliana glycine hydroxymethyltransferase AT5G26780 transcript variant AT5G26780.3 mRNA, complete cds Length = 2072 Score = 87.7 bits (44), Expect = 4e-14 Identities = 93/108 (86%), Gaps = 1/108 (0%) Strand = Plus / Minus Query: 424 tcctcaacaaatcctcttgatgtaagcgcgggggttcccatcctgatgcctccgggtacc 483 ||||||| |||||||||||||| || || || |||||||| | |||||| ||||| ||| Sbjct: 1483 tcctcaatgaatcctcttgatgtgagggctggtgttcccatacggatgccaccgggaacc 1424 Query: 484 atagctgaaacatcaccaggaactgtgtttcttgtttgctgcaatatg 531 || || ||||||||||||||||| || |||||||||||||||||||| Sbjct: 1423 atggcagaaacatcaccaggaacagt-attcttgtttgctgcaatatg 1377 Score = 50.1 bits (25), Expect = 0.008 Identities = 43/49 (87%) Strand = Plus / Minus Query: 215 tcatggtctctttctcgaatccgattgttgggaattgttttgcatattc 263 |||| |||||||||||||| || || ||||||||||| || |||||||| Sbjct: 1692 tcatcgtctctttctcgaacccaatcgttgggaattgcttagcatattc 1644
>ref|NM_180749.2| Arabidopsis thaliana glycine hydroxymethyltransferase AT5G26780 transcript variant AT5G26780.1 mRNA, complete cds Length = 1962 Score = 87.7 bits (44), Expect = 4e-14 Identities = 93/108 (86%), Gaps = 1/108 (0%) Strand = Plus / Minus Query: 424 tcctcaacaaatcctcttgatgtaagcgcgggggttcccatcctgatgcctccgggtacc 483 ||||||| |||||||||||||| || || || |||||||| | |||||| ||||| ||| Sbjct: 1435 tcctcaatgaatcctcttgatgtgagggctggtgttcccatacggatgccaccgggaacc 1376 Query: 484 atagctgaaacatcaccaggaactgtgtttcttgtttgctgcaatatg 531 || || ||||||||||||||||| || |||||||||||||||||||| Sbjct: 1375 atggcagaaacatcaccaggaacagt-attcttgtttgctgcaatatg 1329 Score = 50.1 bits (25), Expect = 0.008 Identities = 43/49 (87%) Strand = Plus / Minus Query: 215 tcatggtctctttctcgaatccgattgttgggaattgttttgcatattc 263 |||| |||||||||||||| || || ||||||||||| || |||||||| Sbjct: 1644 tcatcgtctctttctcgaacccaatcgttgggaattgcttagcatattc 1596
>gb|BT001097.1| Arabidopsis thaliana clone C104687 (D) putative glycine hydroxymethyltransferase (At5g26780) mRNA, complete cds Length = 1633 Score = 87.7 bits (44), Expect = 4e-14 Identities = 93/108 (86%), Gaps = 1/108 (0%) Strand = Plus / Minus Query: 424 tcctcaacaaatcctcttgatgtaagcgcgggggttcccatcctgatgcctccgggtacc 483 ||||||| |||||||||||||| || || || |||||||| | |||||| ||||| ||| Sbjct: 1379 tcctcaatgaatcctcttgatgtgagggctggtgttcccatacggatgccaccgggaacc 1320 Query: 484 atagctgaaacatcaccaggaactgtgtttcttgtttgctgcaatatg 531 || || ||||||||||||||||| || |||||||||||||||||||| Sbjct: 1319 atggcagaaacatcaccaggaacagt-attcttgtttgctgcaatatg 1273 Score = 50.1 bits (25), Expect = 0.008 Identities = 43/49 (87%) Strand = Plus / Minus Query: 215 tcatggtctctttctcgaatccgattgttgggaattgttttgcatattc 263 |||| |||||||||||||| || || ||||||||||| || |||||||| Sbjct: 1588 tcatcgtctctttctcgaacccaatcgttgggaattgcttagcatattc 1540
>dbj|AK220785.1| Arabidopsis thaliana mRNA for glycine hydroxymethyltransferase -like protein, complete cds, clone: RAFL22-26-M08 Length = 909 Score = 87.7 bits (44), Expect = 4e-14 Identities = 93/108 (86%), Gaps = 1/108 (0%) Strand = Plus / Minus Query: 424 tcctcaacaaatcctcttgatgtaagcgcgggggttcccatcctgatgcctccgggtacc 483 ||||||| |||||||||||||| || || || |||||||| | |||||| ||||| ||| Sbjct: 343 tcctcaatgaatcctcttgatgtgagggctggtgttcccatacggatgccaccgggaacc 284 Query: 484 atagctgaaacatcaccaggaactgtgtttcttgtttgctgcaatatg 531 || || ||||||||||||||||| || |||||||||||||||||||| Sbjct: 283 atggcagaaacatcaccaggaacagt-attcttgtttgctgcaatatg 237 Score = 50.1 bits (25), Expect = 0.008 Identities = 43/49 (87%) Strand = Plus / Minus Query: 215 tcatggtctctttctcgaatccgattgttgggaattgttttgcatattc 263 |||| |||||||||||||| || || ||||||||||| || |||||||| Sbjct: 552 tcatcgtctctttctcgaacccaatcgttgggaattgcttagcatattc 504
>emb|BX830710.1|CNS09YQU Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS16ZG06 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1960 Score = 87.7 bits (44), Expect = 4e-14 Identities = 93/108 (86%), Gaps = 1/108 (0%) Strand = Plus / Minus Query: 424 tcctcaacaaatcctcttgatgtaagcgcgggggttcccatcctgatgcctccgggtacc 483 ||||||| |||||||||||||| || || || |||||||| | |||||| ||||| ||| Sbjct: 1429 tcctcaatgaatcctcttgatgtgagggctggtgttcccatacggatgccaccgggaacc 1370 Query: 484 atagctgaaacatcaccaggaactgtgtttcttgtttgctgcaatatg 531 || || ||||||||||||||||| || |||||||||||||||||||| Sbjct: 1369 atggcagaaacatcaccaggaacagt-attcttgtttgctgcaatatg 1323 Score = 50.1 bits (25), Expect = 0.008 Identities = 43/49 (87%) Strand = Plus / Minus Query: 215 tcatggtctctttctcgaatccgattgttgggaattgttttgcatattc 263 |||| |||||||||||||| || || ||||||||||| || |||||||| Sbjct: 1639 tcatcgtctctttctcgaacccaatcgttgggaattgcttagcatattc 1591
>gb|BT001113.1| Arabidopsis thaliana clone C104687 (D) putative glycine hydroxymethyltransferase (At5g26780) mRNA, complete cds Length = 1633 Score = 87.7 bits (44), Expect = 4e-14 Identities = 93/108 (86%), Gaps = 1/108 (0%) Strand = Plus / Minus Query: 424 tcctcaacaaatcctcttgatgtaagcgcgggggttcccatcctgatgcctccgggtacc 483 ||||||| |||||||||||||| || || || |||||||| | |||||| ||||| ||| Sbjct: 1379 tcctcaatgaatcctcttgatgtgagggctggtgttcccatacggatgccaccgggaacc 1320 Query: 484 atagctgaaacatcaccaggaactgtgtttcttgtttgctgcaatatg 531 || || ||||||||||||||||| || |||||||||||||||||||| Sbjct: 1319 atggcagaaacatcaccaggaacagt-attcttgtttgctgcaatatg 1273 Score = 50.1 bits (25), Expect = 0.008 Identities = 43/49 (87%) Strand = Plus / Minus Query: 215 tcatggtctctttctcgaatccgattgttgggaattgttttgcatattc 263 |||| |||||||||||||| || || ||||||||||| || |||||||| Sbjct: 1588 tcatcgtctctttctcgaacccaatcgttgggaattgcttagcatattc 1540
>emb|Z25863.1|STGHMT S.tuberosum mRNA for glycine hydroxymethyltransferase Length = 1745 Score = 79.8 bits (40), Expect = 9e-12 Identities = 82/96 (85%) Strand = Plus / Minus Query: 200 cttagttcttgtacttcatggtctctttctcgaatccgattgttgggaattgttttgcat 259 ||||||| |||||||||||||| |||||||| || || ||||| ||||| || || |||| Sbjct: 1563 cttagtttttgtacttcatggtttctttctcaaacccaattgtagggaactgcttagcat 1504 Query: 260 attcctccacatcgtggcgaagctttgcaatttcag 295 | ||||||||||| || || || ||||||||||||| Sbjct: 1503 actcctccacatcatgacggagttttgcaatttcag 1468 Score = 54.0 bits (27), Expect = 5e-04 Identities = 64/75 (85%), Gaps = 1/75 (1%) Strand = Plus / Minus Query: 457 gttcccatcctgatgcctccgggtaccatagctgaaacatcaccaggaactgtgtttctt 516 |||||||| |||||||| || || ||||| || || ||||| |||||||| ||||| ||| Sbjct: 1306 gttcccattctgatgccaccagggaccatggcagatacatctccaggaacggtgtt-ctt 1248 Query: 517 gtttgctgcaatatg 531 ||| ||||||||||| Sbjct: 1247 gttggctgcaatatg 1233
>gb|AY035117.1| Arabidopsis thaliana putative glycine hydroxymethyltransferase (At5g26780) mRNA, complete cds Length = 1933 Score = 79.8 bits (40), Expect = 9e-12 Identities = 92/108 (85%), Gaps = 1/108 (0%) Strand = Plus / Minus Query: 424 tcctcaacaaatcctcttgatgtaagcgcgggggttcccatcctgatgcctccgggtacc 483 ||||||| |||||||||||||| || || || |||||||| |||||| ||||| ||| Sbjct: 1434 tcctcaatgaatcctcttgatgtgagggctggtgttcccatatggatgccaccgggaacc 1375 Query: 484 atagctgaaacatcaccaggaactgtgtttcttgtttgctgcaatatg 531 || || ||||||||||||||||| || |||||||||||||||||||| Sbjct: 1374 atggcagaaacatcaccaggaacagt-attcttgtttgctgcaatatg 1328 Score = 50.1 bits (25), Expect = 0.008 Identities = 43/49 (87%) Strand = Plus / Minus Query: 215 tcatggtctctttctcgaatccgattgttgggaattgttttgcatattc 263 |||| |||||||||||||| || || ||||||||||| || |||||||| Sbjct: 1643 tcatcgtctctttctcgaacccaatcgttgggaattgcttagcatattc 1595
>ref|NM_119954.2| Arabidopsis thaliana SHM1 (SERINE HYDROXYMETHYLTRANSFERASE 1); glycine hydroxymethyltransferase AT4G37930 (SHM1) mRNA, complete cds Length = 1822 Score = 63.9 bits (32), Expect = 5e-07 Identities = 44/48 (91%) Strand = Plus / Minus Query: 201 ttagttcttgtacttcatggtctctttctcgaatccgattgttgggaa 248 ||||||||||||||||||||| |||||||| || || ||||||||||| Sbjct: 1677 ttagttcttgtacttcatggtttctttctcaaacccaattgttgggaa 1630 Score = 56.0 bits (28), Expect = 1e-04 Identities = 97/120 (80%) Strand = Plus / Minus Query: 394 tcgaagaattcggcaaccttggcgaagtcctcctcaacaaatcctcttgatgtaagcgcg 453 |||||| |||| || || ||||| ||||| ||||||||||| ||||| || || || || Sbjct: 1484 tcgaagtattcagctactttggcaaagtcttcctcaacaaagcctctggaagtgagagca 1425 Query: 454 ggggttcccatcctgatgcctccgggtaccatagctgaaacatcaccaggaactgtgttt 513 || || ||||| ||||| || || || ||||| || |||||||| |||||||| |||||| Sbjct: 1424 ggagtacccattctgattccaccaggaaccatggcagaaacatctccaggaacagtgttt 1365
>emb|AL161592.2|ATCHRIV88 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 88 Length = 198493 Score = 63.9 bits (32), Expect = 5e-07 Identities = 44/48 (91%) Strand = Plus / Plus Query: 201 ttagttcttgtacttcatggtctctttctcgaatccgattgttgggaa 248 ||||||||||||||||||||| |||||||| || || ||||||||||| Sbjct: 134324 ttagttcttgtacttcatggtttctttctcaaacccaattgttgggaa 134371
>emb|AL035538.1|ATF20D10 Arabidopsis thaliana DNA chromosome 4, BAC clone F20D10 (ESSA project) Length = 147215 Score = 63.9 bits (32), Expect = 5e-07 Identities = 44/48 (91%) Strand = Plus / Plus Query: 201 ttagttcttgtacttcatggtctctttctcgaatccgattgttgggaa 248 ||||||||||||||||||||| |||||||| || || ||||||||||| Sbjct: 19909 ttagttcttgtacttcatggtttctttctcaaacccaattgttgggaa 19956
>emb|AJ271726.1|ATH271726 Arabidopsis thaliana mRNA for serine hydroxymethyl transferase (shm1 gene) Length = 1797 Score = 63.9 bits (32), Expect = 5e-07 Identities = 44/48 (91%) Strand = Plus / Minus Query: 201 ttagttcttgtacttcatggtctctttctcgaatccgattgttgggaa 248 ||||||||||||||||||||| |||||||| || || ||||||||||| Sbjct: 1653 ttagttcttgtacttcatggtttctttctcaaacccaattgttgggaa 1606 Score = 56.0 bits (28), Expect = 1e-04 Identities = 97/120 (80%) Strand = Plus / Minus Query: 394 tcgaagaattcggcaaccttggcgaagtcctcctcaacaaatcctcttgatgtaagcgcg 453 |||||| |||| || || ||||| ||||| ||||||||||| ||||| || || || || Sbjct: 1460 tcgaagtattcagctactttggcaaagtcttcctcaacaaagcctctggaagtgagagca 1401 Query: 454 ggggttcccatcctgatgcctccgggtaccatagctgaaacatcaccaggaactgtgttt 513 || || ||||| ||||| || || || ||||| || |||||||| |||||||| |||||| Sbjct: 1400 ggagtacccattctgattccaccaggaaccatggcagaaacatctccaggaacagtgttt 1341
>gb|AY070726.1| Arabidopsis thaliana AT4g37930/F20D10_50 mRNA, complete cds Length = 1775 Score = 63.9 bits (32), Expect = 5e-07 Identities = 44/48 (91%) Strand = Plus / Minus Query: 201 ttagttcttgtacttcatggtctctttctcgaatccgattgttgggaa 248 ||||||||||||||||||||| |||||||| || || ||||||||||| Sbjct: 1661 ttagttcttgtacttcatggtttctttctcaaacccaattgttgggaa 1614 Score = 56.0 bits (28), Expect = 1e-04 Identities = 97/120 (80%) Strand = Plus / Minus Query: 394 tcgaagaattcggcaaccttggcgaagtcctcctcaacaaatcctcttgatgtaagcgcg 453 |||||| |||| || || ||||| ||||| ||||||||||| ||||| || || || || Sbjct: 1468 tcgaagtattcagctactttggcaaagtcttcctcaacaaagcctctggaagtgagagca 1409 Query: 454 ggggttcccatcctgatgcctccgggtaccatagctgaaacatcaccaggaactgtgttt 513 || || ||||| ||||| || || || ||||| || |||||||| |||||||| |||||| Sbjct: 1408 ggagtacccattctgattccaccaggaaccatggcagaaacatctccaggaacagtgttt 1349
>gb|AY057645.1| Arabidopsis thaliana AT4g37930/F20D10_50 mRNA, complete cds Length = 1716 Score = 63.9 bits (32), Expect = 5e-07 Identities = 44/48 (91%) Strand = Plus / Minus Query: 201 ttagttcttgtacttcatggtctctttctcgaatccgattgttgggaa 248 ||||||||||||||||||||| |||||||| || || ||||||||||| Sbjct: 1607 ttagttcttgtacttcatggtttctttctcaaacccaattgttgggaa 1560 Score = 56.0 bits (28), Expect = 1e-04 Identities = 97/120 (80%) Strand = Plus / Minus Query: 394 tcgaagaattcggcaaccttggcgaagtcctcctcaacaaatcctcttgatgtaagcgcg 453 |||||| |||| || || ||||| ||||| ||||||||||| ||||| || || || || Sbjct: 1414 tcgaagtattcagctactttggcaaagtcttcctcaacaaagcctctggaagtgagagca 1355 Query: 454 ggggttcccatcctgatgcctccgggtaccatagctgaaacatcaccaggaactgtgttt 513 || || ||||| ||||| || || || ||||| || |||||||| |||||||| |||||| Sbjct: 1354 ggagtacccattctgattccaccaggaaccatggcagaaacatctccaggaacagtgttt 1295
>gb|AF428388.1|AF428388 Arabidopsis thaliana AT4g37930/F20D10_50 mRNA, complete cds Length = 1730 Score = 63.9 bits (32), Expect = 5e-07 Identities = 44/48 (91%) Strand = Plus / Minus Query: 201 ttagttcttgtacttcatggtctctttctcgaatccgattgttgggaa 248 ||||||||||||||||||||| |||||||| || || ||||||||||| Sbjct: 1608 ttagttcttgtacttcatggtttctttctcaaacccaattgttgggaa 1561 Score = 56.0 bits (28), Expect = 1e-04 Identities = 97/120 (80%) Strand = Plus / Minus Query: 394 tcgaagaattcggcaaccttggcgaagtcctcctcaacaaatcctcttgatgtaagcgcg 453 |||||| |||| || || ||||| ||||| ||||||||||| ||||| || || || || Sbjct: 1415 tcgaagtattcagctactttggcaaagtcttcctcaacaaagcctctggaagtgagagca 1356 Query: 454 ggggttcccatcctgatgcctccgggtaccatagctgaaacatcaccaggaactgtgttt 513 || || ||||| ||||| || || || ||||| || |||||||| |||||||| |||||| Sbjct: 1355 ggagtacccattctgattccaccaggaaccatggcagaaacatctccaggaacagtgttt 1296
>gb|AY054254.1| Arabidopsis thaliana AT4g37930/F20D10_50 mRNA, complete cds Length = 1770 Score = 63.9 bits (32), Expect = 5e-07 Identities = 44/48 (91%) Strand = Plus / Minus Query: 201 ttagttcttgtacttcatggtctctttctcgaatccgattgttgggaa 248 ||||||||||||||||||||| |||||||| || || ||||||||||| Sbjct: 1661 ttagttcttgtacttcatggtttctttctcaaacccaattgttgggaa 1614 Score = 56.0 bits (28), Expect = 1e-04 Identities = 97/120 (80%) Strand = Plus / Minus Query: 394 tcgaagaattcggcaaccttggcgaagtcctcctcaacaaatcctcttgatgtaagcgcg 453 |||||| |||| || || ||||| ||||| ||||||||||| ||||| || || || || Sbjct: 1468 tcgaagtattcagctactttggcaaagtcttcctcaacaaagcctctggaagtgagagca 1409 Query: 454 ggggttcccatcctgatgcctccgggtaccatagctgaaacatcaccaggaactgtgttt 513 || || ||||| ||||| || || || ||||| || |||||||| |||||||| |||||| Sbjct: 1408 ggagtacccattctgattccaccaggaaccatggcagaaacatctccaggaacagtgttt 1349
>gb|BT006353.1| Arabidopsis thaliana At4g37930/F20D10_50 gene, complete cds Length = 1554 Score = 63.9 bits (32), Expect = 5e-07 Identities = 44/48 (91%) Strand = Plus / Minus Query: 201 ttagttcttgtacttcatggtctctttctcgaatccgattgttgggaa 248 ||||||||||||||||||||| |||||||| || || ||||||||||| Sbjct: 1554 ttagttcttgtacttcatggtttctttctcaaacccaattgttgggaa 1507 Score = 56.0 bits (28), Expect = 1e-04 Identities = 97/120 (80%) Strand = Plus / Minus Query: 394 tcgaagaattcggcaaccttggcgaagtcctcctcaacaaatcctcttgatgtaagcgcg 453 |||||| |||| || || ||||| ||||| ||||||||||| ||||| || || || || Sbjct: 1361 tcgaagtattcagctactttggcaaagtcttcctcaacaaagcctctggaagtgagagca 1302 Query: 454 ggggttcccatcctgatgcctccgggtaccatagctgaaacatcaccaggaactgtgttt 513 || || ||||| ||||| || || || ||||| || |||||||| |||||||| |||||| Sbjct: 1301 ggagtacccattctgattccaccaggaaccatggcagaaacatctccaggaacagtgttt 1242
>gb|AF007270.1|F2P16 Arabidopsis thaliana BAC F2P16, complete sequence Length = 110946 Score = 63.9 bits (32), Expect = 5e-07 Identities = 57/64 (89%), Gaps = 1/64 (1%) Strand = Plus / Minus Query: 468 gatgcctccgggtaccatagctgaaacatcaccaggaactgtgtttcttgtttgctgcaa 527 |||||| ||||| ||||| || ||||||||||||||||| || |||||||||||||||| Sbjct: 22521 gatgccaccgggaaccatggcagaaacatcaccaggaacagt-attcttgtttgctgcaa 22463 Query: 528 tatg 531 |||| Sbjct: 22462 tatg 22459 Score = 50.1 bits (25), Expect = 0.008 Identities = 43/49 (87%) Strand = Plus / Minus Query: 215 tcatggtctctttctcgaatccgattgttgggaattgttttgcatattc 263 |||| |||||||||||||| || || ||||||||||| || |||||||| Sbjct: 23145 tcatcgtctctttctcgaacccaatcgttgggaattgcttagcatattc 23097
>emb|BX828432.1|CNS0A3VV Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH89ZH08 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1771 Score = 63.9 bits (32), Expect = 5e-07 Identities = 44/48 (91%) Strand = Plus / Minus Query: 201 ttagttcttgtacttcatggtctctttctcgaatccgattgttgggaa 248 ||||||||||||||||||||| |||||||| || || ||||||||||| Sbjct: 1650 ttagttcttgtacttcatggtttctttctcaaacccaattgttgggaa 1603 Score = 56.0 bits (28), Expect = 1e-04 Identities = 97/120 (80%) Strand = Plus / Minus Query: 394 tcgaagaattcggcaaccttggcgaagtcctcctcaacaaatcctcttgatgtaagcgcg 453 |||||| |||| || || ||||| ||||| ||||||||||| ||||| || || || || Sbjct: 1457 tcgaagtattcagctactttggcaaagtcttcctcaacaaagcctctggaagtgagagca 1398 Query: 454 ggggttcccatcctgatgcctccgggtaccatagctgaaacatcaccaggaactgtgttt 513 || || ||||| ||||| || || || ||||| || |||||||| |||||||| |||||| Sbjct: 1397 ggagtacccattctgattccaccaggaaccatggcagaaacatctccaggaacagtgttt 1338
>gb|AY089107.1| Arabidopsis thaliana clone 33799 mRNA, complete sequence Length = 1725 Score = 63.9 bits (32), Expect = 5e-07 Identities = 44/48 (91%) Strand = Plus / Minus Query: 201 ttagttcttgtacttcatggtctctttctcgaatccgattgttgggaa 248 ||||||||||||||||||||| |||||||| || || ||||||||||| Sbjct: 1616 ttagttcttgtacttcatggtttctttctcaaacccaattgttgggaa 1569 Score = 56.0 bits (28), Expect = 1e-04 Identities = 97/120 (80%) Strand = Plus / Minus Query: 394 tcgaagaattcggcaaccttggcgaagtcctcctcaacaaatcctcttgatgtaagcgcg 453 |||||| |||| || || ||||| ||||| ||||||||||| ||||| || || || || Sbjct: 1423 tcgaagtattcagctactttggcaaagtcttcctcaacaaagcctctggaagtgagagca 1364 Query: 454 ggggttcccatcctgatgcctccgggtaccatagctgaaacatcaccaggaactgtgttt 513 || || ||||| ||||| || || || ||||| || |||||||| |||||||| |||||| Sbjct: 1363 ggagtacccattctgattccaccaggaaccatggcagaaacatctccaggaacagtgttt 1304
>dbj|AP004579.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT11E23, TM0557 Length = 87695 Score = 61.9 bits (31), Expect = 2e-06 Identities = 70/83 (84%) Strand = Plus / Minus Query: 208 ttgtacttcatggtctctttctcgaatccgattgttgggaattgttttgcatattcctcc 267 ||||||||||| || | ||||| || || || ||||| || ||||| ||||| ||||| Sbjct: 7579 ttgtacttcattgttgccttctcaaaaccaatggttggaaactgtttcgcatactcctca 7520 Query: 268 acatcgtggcgaagctttgcaat 290 ||||||||||||||||||||||| Sbjct: 7519 acatcgtggcgaagctttgcaat 7497
>dbj|AP004578.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT17H01, TM0541, complete sequence Length = 110985 Score = 61.9 bits (31), Expect = 2e-06 Identities = 70/83 (84%) Strand = Plus / Minus Query: 208 ttgtacttcatggtctctttctcgaatccgattgttgggaattgttttgcatattcctcc 267 ||||||||||| || | ||||| || || || ||||| || ||||| ||||| ||||| Sbjct: 95182 ttgtacttcattgttgccttctcaaaaccaatggttggaaactgtttcgcatactcctca 95123 Query: 268 acatcgtggcgaagctttgcaat 290 ||||||||||||||||||||||| Sbjct: 95122 acatcgtggcgaagctttgcaat 95100
>gb|BT013569.1| Lycopersicon esculentum clone 132307R, mRNA sequence Length = 1923 Score = 52.0 bits (26), Expect = 0.002 Identities = 93/114 (81%), Gaps = 1/114 (0%) Strand = Plus / Minus Query: 421 tcctcctcaacaaatcctcttgatgtaagcgcgggggttcccatcctgatgcctccgggt 480 |||||||||||||| ||||| || || || || ||||| ||||| | ||||| || ||| Sbjct: 1376 tcctcctcaacaaaacctctagaagtgagagctggggtgcccatgcgaatgccaccaggt 1317 Query: 481 accatagctgaaacatcaccaggaactgtgtttcttgtttgctgcaatatgcac 534 ||||| || || ||||||||||| || || ||||| || |||||||||||||| Sbjct: 1316 accatggcagatacatcaccaggcacagt-attcttattggctgcaatatgcac 1264 Score = 44.1 bits (22), Expect = 0.48 Identities = 52/62 (83%) Strand = Plus / Minus Query: 205 ttcttgtacttcatggtctctttctcgaatccgattgttgggaattgttttgcatattcc 264 |||||||| ||||| || ||||||||||| || | || ||||||||||| ||||| ||| Sbjct: 1592 ttcttgtatttcattgtttctttctcgaaaccaacagtagggaattgtttggcatagtcc 1533 Query: 265 tc 266 || Sbjct: 1532 tc 1531
>gb|DQ139269.1| Medicago truncatula serine hydroxymethyltransferase mRNA, complete cds Length = 1524 Score = 52.0 bits (26), Expect = 0.002 Identities = 74/90 (82%) Strand = Plus / Minus Query: 424 tcctcaacaaatcctcttgatgtaagcgcgggggttcccatcctgatgcctccgggtacc 483 ||||||||||| || || |||||||| || || |||||||| ||||| ||||| || ||| Sbjct: 1301 tcctcaacaaaacccctagatgtaagagcaggagttcccattctgatccctccaggaacc 1242 Query: 484 atagctgaaacatcaccaggaactgtgttt 513 || || || ||||| || ||||| |||||| Sbjct: 1241 attgcagacacatctcctggaacagtgttt 1212
>gb|AF416481.1|AF416481 Cicer arietinum hydroxymethyl transferase mRNA, partial cds Length = 284 Score = 46.1 bits (23), Expect = 0.12 Identities = 50/59 (84%) Strand = Plus / Minus Query: 208 ttgtacttcatggtctctttctcgaatccgattgttgggaattgttttgcatattcctc 266 |||||||||||||| |||| || || || || ||||| |||||||||||| ||||||| Sbjct: 68 ttgtacttcatggttgctttttcaaaaccaatggttggaaattgttttgcaaattcctc 10
>gb|AC129335.4| Mus musculus BAC clone RP23-109H7 from chromosome 1, complete sequence Length = 201274 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 362 ctttaaccttcaaagccaagtt 383 |||||||||||||||||||||| Sbjct: 32135 ctttaaccttcaaagccaagtt 32114
>gb|AC164169.8| Mus musculus 6 BAC RP23-413M4 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 209149 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 157 ttgtgcttcctgtttgcttcct 178 |||||||||||||||||||||| Sbjct: 194735 ttgtgcttcctgtttgcttcct 194756
>gb|AC126010.13| Medicago truncatula clone mth2-20e4, complete sequence Length = 113964 Score = 44.1 bits (22), Expect = 0.48 Identities = 31/34 (91%) Strand = Plus / Minus Query: 416 cgaagtcctcctcaacaaatcctcttgatgtaag 449 |||| ||||||||||||||||| ||||| ||||| Sbjct: 58456 cgaaatcctcctcaacaaatccccttgaagtaag 58423 Score = 40.1 bits (20), Expect = 7.4 Identities = 60/72 (83%), Gaps = 1/72 (1%) Strand = Plus / Minus Query: 460 cccatcctgatgcctccgggtaccatagctgaaacatcaccaggaactgtgtttcttgtt 519 ||||||||||| || || || |||||||| || ||||| || ||||| |||||| || || Sbjct: 58327 cccatcctgataccaccaggaaccatagcagacacatctcctggaacagtgttt-ttatt 58269 Query: 520 tgctgcaatatg 531 ||||||||||| Sbjct: 58268 agctgcaatatg 58257
>gb|AC153848.5| Mus musculus 6 BAC RP23-111L15 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 187830 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 157 ttgtgcttcctgtttgcttcct 178 |||||||||||||||||||||| Sbjct: 54206 ttgtgcttcctgtttgcttcct 54227
>gb|AC113269.13| Mus musculus chromosome 15, clone RP23-372F2, complete sequence Length = 202155 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 160 tgcttcctgtttgcttccttgctgt 184 |||||||||||||||||| |||||| Sbjct: 70853 tgcttcctgtttgcttccgtgctgt 70877
>emb|AL121870.9|HSB166C10 Human DNA sequence from clone RP13-166C10 on chromosome Xq21.1-21.3, complete sequence Length = 122049 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 290 tttcagcttggatgttgctgt 310 ||||||||||||||||||||| Sbjct: 104450 tttcagcttggatgttgctgt 104470
>emb|AL031985.10|HS228H13 Human DNA sequence from clone RP1-228H13 on chromosome 1p34.1-35.3 Contains the gene for a novel protein, a ribosomal protein L21 (RPL21), a ribosomal protein L10a (RPL10A) and the gene for a novel zinc finger protein, complete sequence Length = 139737 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 158 tgtgcttcctgtttgcttcct 178 ||||||||||||||||||||| Sbjct: 105621 tgtgcttcctgtttgcttcct 105601
>gb|AC012077.4|AC012077 Homo sapiens BAC clone RP11-524G14 from Y, complete sequence Length = 209287 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 290 tttcagcttggatgttgctgt 310 ||||||||||||||||||||| Sbjct: 169390 tttcagcttggatgttgctgt 169410
>gb|AC110036.8| Mus musculus chromosome 7, clone RP23-254F9, complete sequence Length = 185681 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 455 gggttcccatcctgatgcct 474 |||||||||||||||||||| Sbjct: 170075 gggttcccatcctgatgcct 170094
>gb|AC118627.6| Mus musculus chromosome 15, clone RP24-91E8, complete sequence Length = 256158 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 166 ctgtttgcttccttgctgtt 185 |||||||||||||||||||| Sbjct: 85155 ctgtttgcttccttgctgtt 85174
>ref|XM_706572.1| Candida albicans SC5314 serine hydroxymethyl transferase I (CaO19.8922), mRNA Length = 1482 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 486 agctgaaacatcaccaggaactgtgttt 513 |||||| |||||||||||||| |||||| Sbjct: 1221 agctgatacatcaccaggaacggtgttt 1194
>ref|XM_745127.1| Aspergillus fumigatus Af293 hypothetical protein (Afu1g04710) partial mRNA Length = 1263 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 172 gcttccttgctgttgaaacacagc 195 |||||||||| ||||||||||||| Sbjct: 35 gcttccttgcagttgaaacacagc 12
>emb|Z78199.1|CEK12F2 Caenorhabditis elegans Cosmid K12F2, complete sequence Length = 12999 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 275 ggcgaagctttgcaatttcagctt 298 |||||||||| ||||||||||||| Sbjct: 7977 ggcgaagcttggcaatttcagctt 8000
>gb|AC116734.14| Mus musculus chromosome 7, clone RP23-359D11, complete sequence Length = 217741 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 455 gggttcccatcctgatgcct 474 |||||||||||||||||||| Sbjct: 34173 gggttcccatcctgatgcct 34192
>gb|AC104871.8| Mus musculus chromosome 13, clone RP23-281C23, complete sequence Length = 165863 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 278 gaagctttgcaatttcagct 297 |||||||||||||||||||| Sbjct: 21826 gaagctttgcaatttcagct 21807
>emb|X08067.1|CEMYO3 Caenorhabditis elegans myo-3 gene for myosin heavy chain 3 (MHC-A) Length = 11621 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 275 ggcgaagctttgcaatttcagctt 298 |||||||||| ||||||||||||| Sbjct: 7886 ggcgaagcttggcaatttcagctt 7863
>gb|AC087847.6| Homo sapiens chromosome 8, clone RP11-353D5, complete sequence Length = 170722 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 205 ttcttgtacttcatggtctc 224 |||||||||||||||||||| Sbjct: 117303 ttcttgtacttcatggtctc 117322
>ref|NM_073664.3| Caenorhabditis elegans MYOsin heavy chain structural genes family member (myo-3) (myo-3) mRNA, complete cds Length = 6059 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 275 ggcgaagctttgcaatttcagctt 298 |||||||||| ||||||||||||| Sbjct: 3565 ggcgaagcttggcaatttcagctt 3542
>gb|AC155267.1| Mus musculus BAC clone RP23-248M19 from chromosome 13, complete sequence Length = 178290 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 278 gaagctttgcaatttcagct 297 |||||||||||||||||||| Sbjct: 83245 gaagctttgcaatttcagct 83226
>gb|AC087798.10| Homo sapiens 12 BAC RP11-788H18 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 160095 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 526 aatatgcacattttctaaaa 545 |||||||||||||||||||| Sbjct: 37622 aatatgcacattttctaaaa 37641
>dbj|AB010698.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MPL12 Length = 87434 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 42 tgcctgcaataagaaactat 61 |||||||||||||||||||| Sbjct: 54636 tgcctgcaataagaaactat 54617
>gb|AF009965.1|AF009965 Candida albicans serine hydroxymethyl-transferase I (SHM1) gene, complete cds Length = 2260 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 486 agctgaaacatcaccaggaactgtgttt 513 |||||| |||||||||||||| |||||| Sbjct: 1999 agctgatacatcaccaggaacggtgttt 1972
>gb|AC009294.8|AC009294 Homo sapiens chromosome 11, clone 579_H_17, complete sequence Length = 211316 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 52 aagaaactattgacaaagtt 71 |||||||||||||||||||| Sbjct: 122669 aagaaactattgacaaagtt 122650
>dbj|AP003460.3| Homo sapiens genomic DNA, chromosome 11 clone:RP11-285P16, complete sequence Length = 171738 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 52 aagaaactattgacaaagtt 71 |||||||||||||||||||| Sbjct: 164989 aagaaactattgacaaagtt 165008
>gb|BC084962.1| Xenopus laevis hypothetical LOC495440, mRNA (cDNA clone MGC:84058 IMAGE:6948237), complete cds Length = 6578 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 348 acctgctgctgcagctttaa 367 |||||||||||||||||||| Sbjct: 240 acctgctgctgcagctttaa 221
>dbj|AB002815.1| Perilla frutescens mRNA for chalcone synthase, complete cds Length = 1449 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 339 cagtttggtacctgctgctg 358 |||||||||||||||||||| Sbjct: 1203 cagtttggtacctgctgctg 1222 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,445,500 Number of Sequences: 3902068 Number of extensions: 5445500 Number of successful extensions: 136584 Number of sequences better than 10.0: 66 Number of HSP's better than 10.0 without gapping: 66 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 136315 Number of HSP's gapped (non-prelim): 229 length of query: 548 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 525 effective length of database: 17,143,297,704 effective search space: 9000231294600 effective search space used: 9000231294600 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)