ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbah62c07
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ZN346_MOUSE (Q9R0B7) Zinc finger protein 346 (Just another zinc ... 32 0.83
2ZN346_HUMAN (Q9UL40) Zinc finger protein 346 (Just another zinc ... 32 0.83
3ZN346_PONPY (Q5R4W8) Zinc finger protein 346 32 0.83
4CCD16_XENTR (Q6DJ13) Coiled-coil domain-containing protein 16 32 1.1
5PRP11_YEAST (Q07350) Pre-mRNA-splicing factor PRP11 31 1.9
6CCD16_XENLA (Q63ZM9) Coiled-coil domain-containing protein 16 30 3.2
7ZN533_MOUSE (Q8BXJ8) Zinc finger protein 533 29 5.4
8ZFY1_XENLA (Q01611) Zinc finger Y-chromosomal protein 1 (ZFY-1) 29 5.4
9ZN533_HUMAN (Q569K4) Zinc finger protein 533 29 5.4
10DOT1L_DROME (Q8INR6) Histone-lysine N-methyltransferase, H3 lysi... 29 7.1
11ZN659_RAT (Q6AXX3) Zinc finger protein 659 29 7.1
12ZN659_HUMAN (Q9H6B1) Zinc finger protein 659 29 7.1
13ZN533_BRARE (Q6PBT9) Zinc finger protein 533 28 9.2

>ZN346_MOUSE (Q9R0B7) Zinc finger protein 346 (Just another zinc finger protein)|
          Length = 294

 Score = 32.0 bits (71), Expect = 0.83
 Identities = 11/24 (45%), Positives = 17/24 (70%)
 Frame = -2

Query: 448 CTACNVVVNSQKVYEFHLAGHKHK 377
           C  C +V+NS + Y+ H++G KHK
Sbjct: 241 CKTCKIVLNSIEQYQAHVSGFKHK 264



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>ZN346_HUMAN (Q9UL40) Zinc finger protein 346 (Just another zinc finger protein)|
          Length = 294

 Score = 32.0 bits (71), Expect = 0.83
 Identities = 11/24 (45%), Positives = 17/24 (70%)
 Frame = -2

Query: 448 CTACNVVVNSQKVYEFHLAGHKHK 377
           C  C +V+NS + Y+ H++G KHK
Sbjct: 241 CKTCKIVLNSIEQYQAHVSGFKHK 264



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>ZN346_PONPY (Q5R4W8) Zinc finger protein 346|
          Length = 310

 Score = 32.0 bits (71), Expect = 0.83
 Identities = 11/24 (45%), Positives = 17/24 (70%)
 Frame = -2

Query: 448 CTACNVVVNSQKVYEFHLAGHKHK 377
           C  C +V+NS + Y+ H++G KHK
Sbjct: 257 CKTCKIVLNSIEQYQAHVSGFKHK 280



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>CCD16_XENTR (Q6DJ13) Coiled-coil domain-containing protein 16|
          Length = 357

 Score = 31.6 bits (70), Expect = 1.1
 Identities = 10/32 (31%), Positives = 20/32 (62%)
 Frame = -2

Query: 451 ICTACNVVVNSQKVYEFHLAGHKHKANVLKLE 356
           +C  CN+ + S+ ++  H+ G +HK  V +L+
Sbjct: 46  LCVVCNIQIKSELLWPAHILGKQHKEKVAELK 77



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>PRP11_YEAST (Q07350) Pre-mRNA-splicing factor PRP11|
          Length = 266

 Score = 30.8 bits (68), Expect = 1.9
 Identities = 14/35 (40%), Positives = 17/35 (48%)
 Frame = -2

Query: 466 HGEMKICTACNVVVNSQKVYEFHLAGHKHKANVLK 362
           H    +C  CN +  S    E HL G KH  NVL+
Sbjct: 62  HSGKLVCKLCNTMHMSWSSVERHLGGKKHGLNVLR 96



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>CCD16_XENLA (Q63ZM9) Coiled-coil domain-containing protein 16|
          Length = 356

 Score = 30.0 bits (66), Expect = 3.2
 Identities = 10/31 (32%), Positives = 19/31 (61%)
 Frame = -2

Query: 448 CTACNVVVNSQKVYEFHLAGHKHKANVLKLE 356
           C  CN ++ S+ ++  H+ G +HK  V +L+
Sbjct: 47  CVVCNSLIKSELLWPAHILGKQHKEKVAELK 77



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>ZN533_MOUSE (Q8BXJ8) Zinc finger protein 533|
          Length = 482

 Score = 29.3 bits (64), Expect = 5.4
 Identities = 13/27 (48%), Positives = 14/27 (51%)
 Frame = -2

Query: 448 CTACNVVVNSQKVYEFHLAGHKHKANV 368
           C+ C V VNS    E H  G KHK  V
Sbjct: 299 CSLCKVAVNSLSQLEAHNTGSKHKTMV 325



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>ZFY1_XENLA (Q01611) Zinc finger Y-chromosomal protein 1 (ZFY-1)|
          Length = 794

 Score = 29.3 bits (64), Expect = 5.4
 Identities = 13/32 (40%), Positives = 16/32 (50%)
 Frame = -2

Query: 448 CTACNVVVNSQKVYEFHLAGHKHKANVLKLEK 353
           CT C+   N +     HL  HK  A V+K EK
Sbjct: 444 CTDCDYTTNKKVSLHNHLESHKLTATVIKTEK 475



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>ZN533_HUMAN (Q569K4) Zinc finger protein 533|
          Length = 471

 Score = 29.3 bits (64), Expect = 5.4
 Identities = 13/27 (48%), Positives = 14/27 (51%)
 Frame = -2

Query: 448 CTACNVVVNSQKVYEFHLAGHKHKANV 368
           C+ C V VNS    E H  G KHK  V
Sbjct: 287 CSLCKVAVNSLSQLEAHNTGSKHKTMV 313



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>DOT1L_DROME (Q8INR6) Histone-lysine N-methyltransferase, H3 lysine-79 specific|
           (EC 2.1.1.43) (Histone H3-K79 methyltransferase)
           (H3-K79-HMTase) (Protein grappa) (DOT1-like protein)
           (dDOT1L)
          Length = 1848

 Score = 28.9 bits (63), Expect = 7.1
 Identities = 19/55 (34%), Positives = 28/55 (50%)
 Frame = +1

Query: 46  KSLKQFPGVSTAQQGGNTRTATKTKASLPNNGIRHGFVNAGFC*SSGNKDGENDE 210
           +S  +  G +T   GGNT TAT T ++  +NG     V + +C S G     +DE
Sbjct: 445 ESSTESDGDATNGNGGNTTTATNTTSA--SNGPMTRKVWSDWCSSKGKSSQSDDE 497



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>ZN659_RAT (Q6AXX3) Zinc finger protein 659|
          Length = 395

 Score = 28.9 bits (63), Expect = 7.1
 Identities = 12/24 (50%), Positives = 14/24 (58%)
 Frame = -2

Query: 448 CTACNVVVNSQKVYEFHLAGHKHK 377
           C+ C V VNS    E H +G KHK
Sbjct: 206 CSLCKVAVNSASQLEAHNSGTKHK 229



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>ZN659_HUMAN (Q9H6B1) Zinc finger protein 659|
          Length = 395

 Score = 28.9 bits (63), Expect = 7.1
 Identities = 12/24 (50%), Positives = 14/24 (58%)
 Frame = -2

Query: 448 CTACNVVVNSQKVYEFHLAGHKHK 377
           C+ C V VNS    E H +G KHK
Sbjct: 206 CSLCKVAVNSASQLEAHNSGTKHK 229



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>ZN533_BRARE (Q6PBT9) Zinc finger protein 533|
          Length = 492

 Score = 28.5 bits (62), Expect = 9.2
 Identities = 12/24 (50%), Positives = 13/24 (54%)
 Frame = -2

Query: 448 CTACNVVVNSQKVYEFHLAGHKHK 377
           C+ C V VNS    E H  G KHK
Sbjct: 308 CSLCKVAVNSLSQLEAHNTGSKHK 331


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 49,347,385
Number of Sequences: 219361
Number of extensions: 682016
Number of successful extensions: 1868
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1817
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1867
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3130907202
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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