>ZAN_RABIT (P57999) Zonadhesin (Fragment)|
          Length = 2282

 Score = 31.2 bits (69), Expect = 0.63
 Identities = 12/25 (48%), Positives = 16/25 (64%)
 Frame = +2

Query: 224  PSCHRQELRCAASRAPSCCSDDNTC 298
            PSC   + RC  +RAPS C++  TC
Sbjct: 1685 PSCFDPDGRCEGARAPSSCAEGCTC 1709

>YDB4_SCHPO (Q10357) Hypothetical protein C22E12.04 in chromosome I|
          Length = 297

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 12/23 (52%), Positives = 16/23 (69%), Gaps = 1/23 (4%)
 Frame = +2

Query: 224 PSCHRQELR-CAASRAPSCCSDD 289
           PSC  QE + C +S+ PSCCS +
Sbjct: 237 PSCCSQEKKSCCSSKKPSCCSQE 259

>SYFA_RHIME (Q92ST0) Phenylalanyl-tRNA synthetase alpha chain (EC 6.1.1.20)|
           (Phenylalanine--tRNA ligase alpha chain) (PheRS)
          Length = 360

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 17/55 (30%), Positives = 29/55 (52%)
 Frame = +3

Query: 195 LAREVSHSSFPAAIDRSSAAQQAERHPVVQMIILVAQSLGA*DHNLSDG*DSESE 359
           LARE    S P    RSS A++   HP+ Q++  +    G    ++++G D E++
Sbjct: 87  LARETVDISLPV---RSSPAERGRIHPISQIVDEITAIFGDMGFSIAEGPDIETD 138

>PPO_VITVI (P43311) Polyphenol oxidase, chloroplast precursor (EC 1.10.3.1)|
           (PPO) (Catechol oxidase)
          Length = 607

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 12/27 (44%), Positives = 21/27 (77%)
 Frame = +1

Query: 199 PVKYRILRSQLPSTGAPLRSKQSAILL 279
           PV  +I+  QLPS+G+P+R++ +A L+
Sbjct: 131 PVTTKIIDFQLPSSGSPMRTRPAAHLV 157

>GLGC_STRAW (Q826D9) Glucose-1-phosphate adenylyltransferase (EC 2.7.7.27)|
           (ADP-glucose synthase) (ADP-glucose pyrophosphorylase)
           (ADPGlc PPase)
          Length = 406

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 13/23 (56%), Positives = 15/23 (65%)
 Frame = -1

Query: 258 AAQRSSCRWQLGTKNAILHGLNL 190
           A QR   RW LG+ +AIL  LNL
Sbjct: 91  AQQRLGPRWYLGSADAILQSLNL 113

>RSSA_BOVIN (P26452) 40S ribosomal protein SA (p40) (C10 protein)|
          Length = 294

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 14/31 (45%), Positives = 17/31 (54%)
 Frame = -3

Query: 361 TSDSESQPSERLWSHAPSDCATSIII*TTGW 269
           T D  +QPS   WS AP+  AT  +  TT W
Sbjct: 263 TEDWSAQPSTEDWSAAPTAQATEWVGTTTEW 293

>GLGC_CORDI (Q6NHY8) Glucose-1-phosphate adenylyltransferase (EC 2.7.7.27)|
           (ADP-glucose synthase) (ADP-glucose pyrophosphorylase)
           (ADPGlc PPase)
          Length = 427

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = -1

Query: 285 SEQQDGALLAAQRSSCRWQLGTKNAILHGLNL 190
           + Q   ++ A QR   RW +G+ +AIL  LNL
Sbjct: 103 TSQYIASVPAQQRLGKRWYMGSADAILQSLNL 134

>PCDH1_HUMAN (Q08174) Protocadherin-1 precursor (Protocadherin-42) (PC42)|
            (Cadherin-like protein 1)
          Length = 1026

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
 Frame = +3

Query: 159  HATITYAPYNPDLAREV-SHSSFPAAIDRSSAAQQAERHPVVQ 284
            H  + Y P +PDL R   S+S  P+   +  +   +++H VVQ
Sbjct: 919  HLPLNYPPGSPDLGRHYRSNSPLPSIQLQPQSPSASKKHQVVQ 961

>LEU3_CLOPA (P31958) 3-isopropylmalate dehydrogenase (EC 1.1.1.85) (Beta-IPM|
           dehydrogenase) (IMDH) (3-IPM-DH)
          Length = 357

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 17/60 (28%), Positives = 27/60 (45%)
 Frame = +3

Query: 102 WGGWGSKTYNLSETYIHTSHATITYAPYNPDLAREVSHSSFPAAIDRSSAAQQAERHPVV 281
           +G  G+K  N  ET   T         YN D  + ++HS+F AA+ R       ++  V+
Sbjct: 144 FGDRGTKEVNGVETAFDTEK-------YNVDEVKRIAHSAFKAAMKRRKKVTSVDKANVL 196


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 52,608,546
Number of Sequences: 219361
Number of extensions: 986935
Number of successful extensions: 2486
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2440
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2486
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 1380984984
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)