ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbah61m22
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|AJ131738.1|SCE131738 Secale cereale mRNA for hypothetical pr... 341 6e-91
2emb|X00235.1|TARUB2 Wheat mRNA fragment for small subunit precur... 333 2e-88
3gb|K02324.1|WHTRBCC Wheat (T. aestivum) chloroplast ribulosebisp... 333 2e-88
4emb|X83095.1|ASRBCSSS A.squarrosa mRNA for ribulose-1,5-bisphosp... 317 9e-84
5emb|X00234.1|TARUB1 Wheat mRNA fragment for small subunit precur... 276 3e-71
6gb|U43493.1|HVU43493 Hordeum vulgare ribulose-1,5-bisphosphate c... 167 2e-38
7emb|BX572625.7| Zebrafish DNA sequence from clone CH211-192O15 i... 46 0.053
8gb|AC113171.3| Homo sapiens chromosome 3 clone RP11-696A14, comp... 46 0.053
9ref|NM_144845.2| Mus musculus UDP glycosyltransferases 3 family,... 44 0.21
10gb|BC022134.1| Mus musculus UDP glycosyltransferases 3 family, p... 44 0.21
11gb|BC034837.1| Mus musculus UDP glycosyltransferases 3 family, p... 44 0.21
12emb|CR384085.5| Zebrafish DNA sequence from clone CH211-267K7 in... 44 0.21
13emb|BX572632.7| Zebrafish DNA sequence from clone CH211-162I20 i... 44 0.21
14gb|AC004138.3| Arabidopsis thaliana chromosome 2 clone T17M13 ma... 44 0.21
15dbj|AK143815.1| Mus musculus 6 days neonate spleen cDNA, RIKEN f... 44 0.21
16dbj|AK052644.1| Mus musculus 0 day neonate kidney cDNA, RIKEN fu... 44 0.21
17dbj|AK050128.1| Mus musculus adult male liver tumor cDNA, RIKEN ... 44 0.21
18dbj|AK041045.1| Mus musculus adult male aorta and vein cDNA, RIK... 44 0.21
19emb|BX005282.24| Zebrafish DNA sequence from clone DKEY-37M22 in... 44 0.21
20gb|AC108919.7| Mus musculus chromosome 6, clone RP23-52O21, comp... 42 0.83
21emb|AL022345.2|HSY738F9 Human DNA sequence from clone XX-Y738F9 ... 42 0.83
22emb|BX548171.4| Zebrafish DNA sequence from clone DKEY-152J20 in... 42 0.83
23gb|AC153916.2| Mus musculus 6 BAC RP23-93D20 (Roswell Park Cance... 42 0.83
24gb|L11243.1|RATRSKM2X Rat skeletal muscle voltage-sensitive sodi... 42 0.83
25gb|AC170993.2| Mus musculus chromosome 1, clone wi1-2059I11, com... 40 3.3
26gb|AC169498.2| Mus musculus chromosome 1, clone wi1-807J5, compl... 40 3.3
27gb|AE017349.1| Cryptococcus neoformans var. neoformans JEC21 chr... 40 3.3
28gb|AC145381.4| Oryza sativa (japonica cultivar-group) chromosome... 40 3.3
29gb|AC145811.2| Oryza sativa (japonica cultivar-group) chromosome... 40 3.3
30gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 3.3
31ref|XM_572904.1| Cryptococcus neoformans var. neoformans JEC21 p... 40 3.3
32gb|AC132050.4| Rattus norvegicus 20 BAC CH230-118G13 (Children's... 40 3.3
33gb|AC073617.16| Homo sapiens Xp BAC RP11-413F15 (Roswell Park Ca... 40 3.3
34gb|AC112800.6| Rattus norvegicus X BAC CH230-275F1 (Children's H... 40 3.3
35gb|AC010377.7| Homo sapiens chromosome 5 clone CTD-2060J20, comp... 40 3.3
36gb|AC007976.4| Drosophila melanogaster, chromosome 2L, region 22... 40 3.3
37dbj|AK054537.1| Mus musculus 2 days pregnant adult female ovary ... 40 3.3
38dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 3.3
39dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 3.3
40gb|AC009101.7|AC009101 Homo sapiens chromosome 16 clone RP11-439... 40 3.3
41gb|AC096547.1| Homo sapiens BAC clone CTD-2016K1 from 2, complet... 40 3.3
42dbj|AP006860.2| Oryza sativa (japonica cultivar-group) genomic D... 40 3.3
43dbj|AP004583.3| Oryza sativa (japonica cultivar-group) genomic D... 40 3.3
44gb|AE003584.5| Drosophila melanogaster chromosome 2L, section 7 ... 40 3.3
45gb|AC004340.1|AC004340 Drosophila melanogaster DNA sequence (P1 ... 40 3.3
46emb|AL671901.14| Mouse DNA sequence from clone RP23-238B14 on ch... 40 3.3
47gb|AC170749.6| Mus musculus chromosome 1, clone RP23-322G4, comp... 40 3.3 
>emb|AJ131738.1|SCE131738 Secale cereale mRNA for hypothetical protein, clone 9
          Length = 875

 Score =  341 bits (172), Expect = 6e-91
 Identities = 221/237 (93%), Gaps = 1/237 (0%)
 Strand = Plus / Minus

                                                                       
Query: 19  tattgtataatattatgcgtacgtncatatacatagncaccgacagcattcacatacaag 78
           |||||||||||||||||||| ||| ||||||||||| |||||| ||||||||||||| ||
Sbjct: 830 tattgtataatattatgcgtccgtgcatatacatagccaccgatagcattcacatacgag 771

                                                                       
Query: 79  catgttttctcgagccatgttggtacatgaacatggacatacacatattcttaggaacaa 138
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 770 catgctttctcgagccatgttggtacatgaacatggacatacacatattcttaggaacaa 711

                                                                       
Query: 139 ataagaaagataaatggngaaggaaaacccaaagcaatgtcagagttgacaaaactgcat 198
           |||||||||||||||||  |||||||||||||||||||||||||||||||||||||||| 
Sbjct: 710 ataagaaagataaatggacaaggaaaacccaaagcaatgtcagagttgacaaaactgcaa 651

                                                                    
Query: 199 tggcactttatatgtggcccatcgcgcagtgagctttttatgccttgtcggactcct 255
           |||||||||||||| ||||| | | | |||||||| ||||||||||| |||||||||
Sbjct: 650 tggcactttatatgcggcccgtggtg-agtgagctgtttatgccttgccggactcct 595
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>emb|X00235.1|TARUB2 Wheat mRNA fragment for small subunit precursor of RuBPCase (EC
           4.1.1.39 ribulosebisphosphate carboxylase) clones 234
           and 406
          Length = 743

 Score =  333 bits (168), Expect = 2e-88
 Identities = 220/237 (92%), Gaps = 1/237 (0%)
 Strand = Plus / Minus

                                                                       
Query: 19  tattgtataatattatgcgtacgtncatatacatagncaccgacagcattcacatacaag 78
           |||||||||||||||||||| ||| ||||||||||| |||||| ||||||| ||||| ||
Sbjct: 709 tattgtataatattatgcgtccgttcatatacatagccaccgatagcattctcatacgag 650

                                                                       
Query: 79  catgttttctcgagccatgttggtacatgaacatggacatacacatattcttaggaacaa 138
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 649 catgctttctcgagccatgttggtacatgaacatggacatacacatattcttaggaacaa 590

                                                                       
Query: 139 ataagaaagataaatggngaaggaaaacccaaagcaatgtcagagttgacaaaactgcat 198
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 589 ataagaaagataaatggagaaggaaaacccaaagcaatgtcagagttgacaaaactgcaa 530

                                                                    
Query: 199 tggcactttatatgtggcccatcgcgcagtgagctttttatgccttgtcggactcct 255
           ||||||||||||| |||||  ||| | |||||||| |||| |||||| |||||||||
Sbjct: 529 tggcactttatatatggcctgtcgtg-agtgagctgtttaggccttgccggactcct 474
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>gb|K02324.1|WHTRBCC Wheat (T. aestivum) chloroplast ribulosebisphosphate carboxylase
           small subunit mRNA, clone pTS406, 3' end
          Length = 317

 Score =  333 bits (168), Expect = 2e-88
 Identities = 220/237 (92%), Gaps = 1/237 (0%)
 Strand = Plus / Minus

                                                                       
Query: 19  tattgtataatattatgcgtacgtncatatacatagncaccgacagcattcacatacaag 78
           |||||||||||||||||||| ||| ||||||||||| |||||| ||||||||||||| ||
Sbjct: 283 tattgtataatattatgcgtccgtgcatatacatagccaccgatagcattcacatacgag 224

                                                                       
Query: 79  catgttttctcgagccatgttggtacatgaacatggacatacacatattcttaggaacaa 138
           |||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 223 catgctttctcgagccatgttcgtacatgaacatggacatacacatattcttaggaacaa 164

                                                                       
Query: 139 ataagaaagataaatggngaaggaaaacccaaagcaatgtcagagttgacaaaactgcat 198
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 163 ataagaaagataaatggagaaggaaaacccaaagcaatgtcagagttgacaaaactgcaa 104

                                                                    
Query: 199 tggcactttatatgtggcccatcgcgcagtgagctttttatgccttgtcggactcct 255
           ||||||||||||| |||||  ||| | |||||||| |||| |||||| |||||||||
Sbjct: 103 tggcactttatatatggcctgtcgtg-agtgagctgtttaggccttgccggactcct 48
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>emb|X83095.1|ASRBCSSS A.squarrosa mRNA for ribulose-1,5-bisphosphate
           carboxylase/oxygenase, small subunit
          Length = 837

 Score =  317 bits (160), Expect = 9e-84
 Identities = 181/189 (95%)
 Strand = Plus / Minus

                                                                       
Query: 19  tattgtataatattatgcgtacgtncatatacatagncaccgacagcattcacatacaag 78
           |||||||||||||||||||| ||| ||||||||||| |||||| ||||||||||||| ||
Sbjct: 790 tattgtataatattatgcgtccgtgcatatacatagccaccgatagcattcacatacgag 731

                                                                       
Query: 79  catgttttctcgagccatgttggtacatgaacatggacatacacatattcttaggaacaa 138
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 730 catgctttctcgagccatgttggtacatgaacatggacatacacatattcttaggaacaa 671

                                                                       
Query: 139 ataagaaagataaatggngaaggaaaacccaaagcaatgtcagagttgacaaaactgcat 198
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 670 ataagaaagataaatggagaaggaaaacccaaagcaatgtcagagttgacaaaactgcaa 611

                    
Query: 199 tggcacttt 207
           |||||||||
Sbjct: 610 tggcacttt 602
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>emb|X00234.1|TARUB1 Wheat mRNA fragment for small subunit precursor of RuBPCase (EC
           4.1.1.39) (ribulosebisphosphate carboxylase, clone 512)
          Length = 611

 Score =  276 bits (139), Expect = 3e-71
 Identities = 206/228 (90%), Gaps = 1/228 (0%)
 Strand = Plus / Minus

                                                                       
Query: 28  atattatgcgtacgtncatatacatagncaccgacagcattcacatacaagcatgttttc 87
           |||||||| | | || ||||||||||| ||||||  |||||||||||| |||| | ||||
Sbjct: 549 atattatgtgcatgtgcatatacatagccaccgattgcattcacatacgagcacgctttc 490

                                                                       
Query: 88  tcgagccatgttggtacatgaacatggacatacacatattcttaggaacaaataagaaag 147
           ||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 489 tcgagccatgttgttacatgaacatggacatacacatattcttaggaacaagtaagaaag 430

                                                                       
Query: 148 ataaatggngaaggaaaacccaaagcaatgtcagagttgacaaaactgcattggcacttt 207
           | |||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 429 acaaatggagaaggaaaacccaaagcaatgtcagagttgacaaaactgcaatggcacttt 370

                                                           
Query: 208 atatgtggcccatcgcgcagtgagctttttatgccttgtcggactcct 255
           ||||||||||| | | | |||||||| |||| |||||| |||||||||
Sbjct: 369 atatgtggcccgtggtg-agtgagctgtttaggccttgccggactcct 323
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>gb|U43493.1|HVU43493 Hordeum vulgare ribulose-1,5-bisphosphate carboxylase small subunit
           mRNA, complete cds
          Length = 816

 Score =  167 bits (84), Expect = 2e-38
 Identities = 207/236 (87%), Gaps = 11/236 (4%)
 Strand = Plus / Minus

                                                                       
Query: 20  attgtataatattatgcgtacgtncatatacatagncaccgacagcattcacatacaagc 79
           |||||||||||||||| | | || ||||||||||| |||||| ||||||||||||| |||
Sbjct: 753 attgtataatattatgtgcatgtgcatatacatagccaccgatagcattcacatacgagc 694

                                                                       
Query: 80  atgttttctcgagccatgttggtacatgaacatggacatacacatattcttaggaacaaa 139
           ||| ||||||||| |||||||||||||||||||||   |||||| ||| |||||||| ||
Sbjct: 693 atgctttctcgag-catgttggtacatgaacatgggactacacacatt-ttaggaac-aa 637

                                                                       
Query: 140 taagaaagataaatggngaaggaaaacccaaagcaatgtcagagttgacaaaactgcatt 199
           |||||||||| ||||| |||||||||||  |||| |||||||||||||| |||||||| |
Sbjct: 636 taagaaagat-aatggagaaggaaaacc--aagc-atgtcagagttgac-aaactgcaat 582

                                                                   
Query: 200 ggcactttatatgtggcccatcgcgcagtgagctttttatgccttgtcggactcct 255
           ||||| |||||||| ||||||||  ||||||||| ||||||||||| | |||||||
Sbjct: 581 ggcac-ttatatgt-gcccatcg-tcagtgagctgtttatgccttgcccgactcct 529
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>emb|BX572625.7| Zebrafish DNA sequence from clone CH211-192O15 in linkage group 12,
              complete sequence
          Length = 155592

 Score = 46.1 bits (23), Expect = 0.053
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 101    gtacatgaacatggacatacaca 123
              |||||||||||||||||||||||
Sbjct: 152158 gtacatgaacatggacatacaca 152136
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>gb|AC113171.3| Homo sapiens chromosome 3 clone RP11-696A14, complete sequence
          Length = 183599

 Score = 46.1 bits (23), Expect = 0.053
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                           
Query: 136   caaataagaaagataaatggngaaggaaaa 165
             ||||||||||||| |||||| |||||||||
Sbjct: 97466 caaataagaaagaaaaatggagaaggaaaa 97437
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>ref|NM_144845.2| Mus musculus UDP glycosyltransferases 3 family, polypeptide A2
           (Ugt3a2), mRNA
          Length = 2197

 Score = 44.1 bits (22), Expect = 0.21
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 162 aaaacccaaagcaatgtcagagttgacaaa 191
           |||| ||||||||| |||||||||||||||
Sbjct: 869 aaaatccaaagcaaagtcagagttgacaaa 840
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>gb|BC022134.1| Mus musculus UDP glycosyltransferases 3 family, polypeptide A2,
           transcript variant 1, mRNA (cDNA clone MGC:37820
           IMAGE:5098754), complete cds
          Length = 2196

 Score = 44.1 bits (22), Expect = 0.21
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 162 aaaacccaaagcaatgtcagagttgacaaa 191
           |||| ||||||||| |||||||||||||||
Sbjct: 853 aaaatccaaagcaaagtcagagttgacaaa 824
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>gb|BC034837.1| Mus musculus UDP glycosyltransferases 3 family, polypeptide A2,
           transcript variant 1, mRNA (cDNA clone MGC:37957
           IMAGE:5134131), complete cds
          Length = 2192

 Score = 44.1 bits (22), Expect = 0.21
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 162 aaaacccaaagcaatgtcagagttgacaaa 191
           |||| ||||||||| |||||||||||||||
Sbjct: 849 aaaatccaaagcaaagtcagagttgacaaa 820
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>emb|CR384085.5| Zebrafish DNA sequence from clone CH211-267K7 in linkage group 5,
             complete sequence
          Length = 140947

 Score = 44.1 bits (22), Expect = 0.21
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 13    acatattattgtataatattat 34
             ||||||||||||||||||||||
Sbjct: 93606 acatattattgtataatattat 93627
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>emb|BX572632.7| Zebrafish DNA sequence from clone CH211-162I20 in linkage group 5,
             complete sequence
          Length = 162716

 Score = 44.1 bits (22), Expect = 0.21
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 13    acatattattgtataatattat 34
             ||||||||||||||||||||||
Sbjct: 75971 acatattattgtataatattat 75950
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>gb|AC004138.3| Arabidopsis thaliana chromosome 2 clone T17M13 map CIC11A04, complete
              sequence
          Length = 104016

 Score = 44.1 bits (22), Expect = 0.21
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 14     catattattgtataatattatg 35
              ||||||||||||||||||||||
Sbjct: 102439 catattattgtataatattatg 102460
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>dbj|AK143815.1| Mus musculus 6 days neonate spleen cDNA, RIKEN full-length enriched
           library, clone:F430112M20 product:Hypothetical protein
           (Hypothetical UDP-glucoronosyl and UDP-glucosyl
           transferase containing protein), full insert sequence
          Length = 2284

 Score = 44.1 bits (22), Expect = 0.21
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 162 aaaacccaaagcaatgtcagagttgacaaa 191
           |||| ||||||||| |||||||||||||||
Sbjct: 883 aaaatccaaagcaaagtcagagttgacaaa 854
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>dbj|AK052644.1| Mus musculus 0 day neonate kidney cDNA, RIKEN full-length enriched
           library, clone:D630011D02 product:HYPOTHETICAL 59.7 KDA
           PROTEIN [Mus musculus]; weakly similar to
           UDP-Glycosyltransferase/glycogen phosphorylase, full
           insert sequence
          Length = 1723

 Score = 44.1 bits (22), Expect = 0.21
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 162 aaaacccaaagcaatgtcagagttgacaaa 191
           |||| ||||||||| |||||||||||||||
Sbjct: 878 aaaatccaaagcaaagtcagagttgacaaa 849
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>dbj|AK050128.1| Mus musculus adult male liver tumor cDNA, RIKEN full-length
           enriched library, clone:C730018P11 product:hypothetical
           UDP-glucoronosyl and UDP-glucosyl transferase containing
           protein, full insert sequence
          Length = 2197

 Score = 44.1 bits (22), Expect = 0.21
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 162 aaaacccaaagcaatgtcagagttgacaaa 191
           |||| ||||||||| |||||||||||||||
Sbjct: 869 aaaatccaaagcaaagtcagagttgacaaa 840
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>dbj|AK041045.1| Mus musculus adult male aorta and vein cDNA, RIKEN full-length
           enriched library, clone:A530069C13 product:hypothetical
           UDP-Glycosyltransferase/glycogen phosphorylase structure
           containing protein, full insert sequence
          Length = 1353

 Score = 44.1 bits (22), Expect = 0.21
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 162 aaaacccaaagcaatgtcagagttgacaaa 191
           |||| ||||||||| |||||||||||||||
Sbjct: 853 aaaatccaaagcaaagtcagagttgacaaa 824
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>emb|BX005282.24| Zebrafish DNA sequence from clone DKEY-37M22 in linkage group 11,
             complete sequence
          Length = 153270

 Score = 44.1 bits (22), Expect = 0.21
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 10    ttgacatattattgtataatat 31
             ||||||||||||||||||||||
Sbjct: 88645 ttgacatattattgtataatat 88666
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>gb|AC108919.7| Mus musculus chromosome 6, clone RP23-52O21, complete sequence
          Length = 141653

 Score = 42.1 bits (21), Expect = 0.83
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 125    attcttaggaacaaataagaaagat 149
              ||||||||||||||| |||||||||
Sbjct: 131901 attcttaggaacaaaaaagaaagat 131877
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>emb|AL022345.2|HSY738F9 Human DNA sequence from clone XX-Y738F9 on chromosome 10 Contains the
              ZNF37B pseudogene for zinc finger protein 37b (KOX 21), a
              eukaryotic translation initiation factor 3 subunit 6
              interacting protein (EIF3S6IP) pseudogene, the 3' end of
              the ZNF11B gene for zinc finger protein 11b (KOX 2), a
              novel gene (FLJ23327) and two CpG Islands, complete
              sequence
          Length = 146328

 Score = 42.1 bits (21), Expect = 0.83
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 171    agcaatgtcagagttgacaaa 191
              |||||||||||||||||||||
Sbjct: 137861 agcaatgtcagagttgacaaa 137841
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>emb|BX548171.4| Zebrafish DNA sequence from clone DKEY-152J20 in linkage group 14,
              complete sequence
          Length = 174366

 Score = 42.1 bits (21), Expect = 0.83
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 14     catattattgtataatattat 34
              |||||||||||||||||||||
Sbjct: 161920 catattattgtataatattat 161900
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>gb|AC153916.2| Mus musculus 6 BAC RP23-93D20 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 221540

 Score = 42.1 bits (21), Expect = 0.83
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 125    attcttaggaacaaataagaaagat 149
              ||||||||||||||| |||||||||
Sbjct: 193767 attcttaggaacaaaaaagaaagat 193791
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>gb|L11243.1|RATRSKM2X Rat skeletal muscle voltage-sensitive sodium channel subtype 2
            (rSkM2) gene
          Length = 2825

 Score = 42.1 bits (21), Expect = 0.83
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 105  atgaacatggacatacacata 125
            |||||||||||||||||||||
Sbjct: 1420 atgaacatggacatacacata 1400
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>gb|AC170993.2| Mus musculus chromosome 1, clone wi1-2059I11, complete sequence
          Length = 41406

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 101   gtacatgaacatggacatacacatattc 128
             ||||||||||||| ||||| ||||||||
Sbjct: 12032 gtacatgaacatgtacatatacatattc 12005
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>gb|AC169498.2| Mus musculus chromosome 1, clone wi1-807J5, complete sequence
          Length = 45765

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 101   gtacatgaacatggacatacacatattc 128
             ||||||||||||| ||||| ||||||||
Sbjct: 41180 gtacatgaacatgtacatatacatattc 41153
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>gb|AE017349.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 9, complete
               sequence
          Length = 1178688

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 163     aaacccaaagcaatgtcaga 182
               ||||||||||||||||||||
Sbjct: 1130897 aaacccaaagcaatgtcaga 1130916
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>gb|AC145381.4| Oryza sativa (japonica cultivar-group) chromosome 3 clone
            OSJNBa0024K17 map near S16403, complete sequence
          Length = 172238

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 103  acatgaacatggacatacacatat 126
            ||||||||||| ||||||||||||
Sbjct: 4895 acatgaacatgaacatacacatat 4872
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>gb|AC145811.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0088L13
              map near C50029S, complete sequence
          Length = 129900

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 103    acatgaacatggacatacacatat 126
              ||||||||||| ||||||||||||
Sbjct: 123589 acatgaacatgaacatacacatat 123566
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 103      acatgaacatggacatacacatat 126
                ||||||||||| ||||||||||||
Sbjct: 24888607 acatgaacatgaacatacacatat 24888584
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>ref|XM_572904.1| Cryptococcus neoformans var. neoformans JEC21 protein phosphatase
           (CNI04270) partial mRNA
          Length = 3071

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 163 aaacccaaagcaatgtcaga 182
           ||||||||||||||||||||
Sbjct: 80  aaacccaaagcaatgtcaga 99
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>gb|AC132050.4| Rattus norvegicus 20 BAC CH230-118G13 (Children's Hospital Oakland
              Research Institute) complete sequence
          Length = 247624

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 13     acatattattgtataatatt 32
              ||||||||||||||||||||
Sbjct: 213642 acatattattgtataatatt 213623
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>gb|AC073617.16| Homo sapiens Xp BAC RP11-413F15 (Roswell Park Cancer Institute Human
            BAC Library) complete sequence
          Length = 151302

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 119  acacatattcttaggaacaaataagaaa 146
            |||||||||||||| |||||| ||||||
Sbjct: 9178 acacatattcttagtaacaaaaaagaaa 9151
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>gb|AC112800.6| Rattus norvegicus X BAC CH230-275F1 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 147560

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 133   gaacaaataagaaagataaa 152
             ||||||||||||||||||||
Sbjct: 45388 gaacaaataagaaagataaa 45407
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>gb|AC010377.7| Homo sapiens chromosome 5 clone CTD-2060J20, complete sequence
          Length = 139476

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 105   atgaacatggacatacacatattc 128
             |||||||||| |||||||||||||
Sbjct: 31202 atgaacatgggcatacacatattc 31225
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>gb|AC007976.4| Drosophila melanogaster, chromosome 2L, region 22C-22D, BAC clone
              BACR01K07, complete sequence
          Length = 175867

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 15     atattattgtataatattat 34
              ||||||||||||||||||||
Sbjct: 122920 atattattgtataatattat 122901
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>dbj|AK054537.1| Mus musculus 2 days pregnant adult female ovary cDNA, RIKEN
           full-length enriched library, clone:E330038M22
           product:unclassifiable, full insert sequence
          Length = 3845

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 101 gtacatgaacatggacatacacatattc 128
           ||||||||||||| ||||| ||||||||
Sbjct: 695 gtacatgaacatgtacatatacatattc 722
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 103      acatgaacatggacatacacatat 126
                ||||||||||| ||||||||||||
Sbjct: 11682609 acatgaacatgaacatacacatat 11682586



 Score = 40.1 bits (20), Expect = 3.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 103      acatgaacatggacatacacatat 126
                ||||||||||| ||||||||||||
Sbjct: 10428734 acatgaacatgaacatacacatat 10428757
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 103      acatgaacatggacatacacatat 126
                ||||||||||| ||||||||||||
Sbjct: 24979677 acatgaacatgaacatacacatat 24979654
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>gb|AC009101.7|AC009101 Homo sapiens chromosome 16 clone RP11-439I14, complete sequence
          Length = 172293

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 15    atattattgtataatattat 34
             ||||||||||||||||||||
Sbjct: 17042 atattattgtataatattat 17061
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>gb|AC096547.1| Homo sapiens BAC clone CTD-2016K1 from 2, complete sequence
          Length = 129164

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 15    atattattgtataatattat 34
             ||||||||||||||||||||
Sbjct: 31292 atattattgtataatattat 31273
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>dbj|AP006860.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
            clone:B1026E06
          Length = 162784

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 103  acatgaacatggacatacacatat 126
            ||||||||||| ||||||||||||
Sbjct: 5348 acatgaacatgaacatacacatat 5371
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>dbj|AP004583.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBb0005N06
          Length = 140639

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 103   acatgaacatggacatacacatat 126
             ||||||||||| ||||||||||||
Sbjct: 31151 acatgaacatgaacatacacatat 31128
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>gb|AE003584.5| Drosophila melanogaster chromosome 2L, section 7 of 83 of the complete
              sequence
          Length = 346734

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 15     atattattgtataatattat 34
              ||||||||||||||||||||
Sbjct: 324111 atattattgtataatattat 324092
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>gb|AC004340.1|AC004340 Drosophila melanogaster DNA sequence (P1 DS07020 (D238)), complete
            sequence
          Length = 51050

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 15   atattattgtataatattat 34
            ||||||||||||||||||||
Sbjct: 2952 atattattgtataatattat 2933
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>emb|AL671901.14| Mouse DNA sequence from clone RP23-238B14 on chromosome X, complete
             sequence
          Length = 201821

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 105   atgaacatggacatacacat 124
             ||||||||||||||||||||
Sbjct: 17489 atgaacatggacatacacat 17470
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>gb|AC170749.6| Mus musculus chromosome 1, clone RP23-322G4, complete sequence
          Length = 208713

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 101   gtacatgaacatggacatacacatattc 128
             ||||||||||||| ||||| ||||||||
Sbjct: 68296 gtacatgaacatgtacatatacatattc 68323


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,441,403
Number of Sequences: 3902068
Number of extensions: 2441403
Number of successful extensions: 49226
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 47
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 49120
Number of HSP's gapped (non-prelim): 100
length of query: 255
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 233
effective length of database: 17,147,199,772
effective search space: 3995297546876
effective search space used: 3995297546876
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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