>CYSI_BUCAI (P57502) Sulfite reductase [NADPH] hemoprotein beta-component (EC|
           1.8.1.2) (SIR-HP) (SIRHP)
          Length = 569

 Score = 29.6 bits (65), Expect = 2.1
 Identities = 12/26 (46%), Positives = 18/26 (69%)
 Frame = -3

Query: 145 FGWAYXTLKNVNNHWSMEWMIKNGYI 68
           FGW    +K++NN+WS+   I+NG I
Sbjct: 345 FGW----IKDINNNWSLTLFIQNGRI 366

>POK11_HUMAN (P87893) HERV-K_22q11.21 provirus ancestral Pol protein (HERV-K101|
           Pol protein) [Includes: Reverse transcriptase (RT) (EC
           2.7.7.49)]
          Length = 254

 Score = 29.6 bits (65), Expect = 2.1
 Identities = 14/34 (41%), Positives = 20/34 (58%), Gaps = 3/34 (8%)
 Frame = -3

Query: 256 PLTFVGE---WVAEWQVPNATKEDLXMFANTQMD 164
           PLT+  E   WV +WQ+P    E L + AN Q++
Sbjct: 25  PLTWKTEKPVWVNQWQLPKQKLEALHLLANEQLE 58

>CYSI_BUCAP (P0C0B2) Sulfite reductase [NADPH] hemoprotein beta-component (EC|
           1.8.1.2) (SIR-HP) (SIRHP)
          Length = 566

 Score = 29.6 bits (65), Expect = 2.1
 Identities = 13/26 (50%), Positives = 16/26 (61%)
 Frame = -3

Query: 145 FGWAYXTLKNVNNHWSMEWMIKNGYI 68
           FGW     KN+NN WS+   I+NG I
Sbjct: 342 FGWT----KNINNDWSLTVFIQNGRI 363

>DPOL_METTH (O27276) DNA polymerase (EC 2.7.7.7)|
          Length = 586

 Score = 28.1 bits (61), Expect = 6.0
 Identities = 14/49 (28%), Positives = 21/49 (42%)
 Frame = -3

Query: 226 EWQVPNATKEDLXMFANTQMDVYGKATFGWAYXTLKNVNNHWSMEWMIK 80
           E ++ N  +E L   ANT   VYG + F W           W  +++ K
Sbjct: 512 ERKILNVQQEALKRLANTMYGVYGYSRFRWYSMECAEAITAWGRDYIKK 560

>PAK7_MOUSE (Q8C015) Serine/threonine-protein kinase PAK 7 (EC 2.7.11.1)|
           (p21-activated kinase 7) (PAK-7) (p21-activated kinase
           5)
          Length = 719

 Score = 27.7 bits (60), Expect = 7.9
 Identities = 22/69 (31%), Positives = 30/69 (43%), Gaps = 5/69 (7%)
 Frame = +1

Query: 43  ETYPRFSRRCTHS*SSTPYSSGCLHS*EXNKPIQTLPFHTHPSV-----YLQTX*DLPSL 207
           +TYPR   +   S S   YSSG   S +          + HPS+     Y+ T   L SL
Sbjct: 348 DTYPRGPTKLPQSQSKAGYSSG---SHQYPSGYHKASLYHHPSLQTSSQYISTASYLSSL 404

Query: 208 HWAPATQPP 234
             + +T PP
Sbjct: 405 SISSSTYPP 413


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 45,266,880
Number of Sequences: 219361
Number of extensions: 878338
Number of successful extensions: 2184
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2147
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2184
length of database: 80,573,946
effective HSP length: 69
effective length of database: 65,438,037
effective search space used: 1570512888
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)