>PCRB_SULAC (Q4JAS3) Protein pcrB homolog|
          Length = 257

 Score = 29.6 bits (65), Expect = 6.0
 Identities = 17/52 (32%), Positives = 26/52 (50%)
 Frame = -2

Query: 341 IIAVVCQQALPTHWLFIGSGQCNTQLGGCILFSWRNIELIIGKVYLAGHVHM 186
           II  +  + LPT +L IG G     +G   +  + NIELI+     A ++ M
Sbjct: 120 IIKRIGLEVLPTAYLIIGHGGTAGHIGRARVIPYDNIELIVSYSLAANYMGM 171

>PTFLB_ECOLI (P32154) Fructose-like PTS system EIIBC component [Includes:|
           Fructose-like phosphotransferase enzyme IIB component
           (EC 2.7.1.69) (PTS system fructose-like EIIB component);
           Fructose-like permease IIC component (PTS system
           fructose-like EIIC co
          Length = 483

 Score = 29.6 bits (65), Expect = 6.0
 Identities = 13/28 (46%), Positives = 17/28 (60%)
 Frame = -1

Query: 285 GPMQHTAWWLHFIFLEKHRVDYWEGLLG 202
           GP+  TAW+  F  LEKH  D W  ++G
Sbjct: 321 GPINKTAWFFCFSLLEKHIYD-WYAIVG 347

>MUC1_HYLLA (Q29435) Mucin-1 precursor (MUC-1)|
          Length = 475

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = +3

Query: 444 HSR*TPASHGNHTRKPQLRLIIIHFFTRFGASN 542
           HS  +P +  NH+  PQL + +  FF  F  SN
Sbjct: 239 HSTVSPLTSSNHSTSPQLSIGVSFFFLSFHISN 271

>Y1620_STAAC (Q5HFJ7) UPF0085 protein SACOL1620|
          Length = 272

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 21/69 (30%), Positives = 34/69 (49%)
 Frame = +3

Query: 93  VILPSSMTSKNP*LQVTTTEEPARIKSFTAIHVDMACQVNLPNNQLDVSPRK*NATTKLC 272
           V+L  S TSK P  Q          KS+  ++V +  +V  P+   D++P+K       C
Sbjct: 148 VLLGISRTSKTPLSQYLAH------KSYKVMNVPIVPEVTPPDGLYDINPKK-------C 194

Query: 273 VALARSDEQ 299
           +AL  S+E+
Sbjct: 195 IALKISEEK 203


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 83,314,289
Number of Sequences: 219361
Number of extensions: 1865657
Number of successful extensions: 4289
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4167
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4286
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4545742239
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)