ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbah61m15 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AF024589.1| X Tritordeum sp. glycine decarboxylase P subunit mRNA, complete cds Length = 3487 Score = 589 bits (297), Expect = e-165 Identities = 424/465 (91%), Gaps = 25/465 (5%) Strand = Plus / Minus Query: 1 ttatttttcctgtattn-gagaagagtagaaatgctagccaatatagctaatttcacttt 59 |||||| ||||||||| ||||||||| |||||||||||||||||||||||||||||||| Sbjct: 3413 ttatttgtcctgtattcagagaagagtggaaatgctagccaatatagctaatttcacttt 3354 Query: 60 caaatgggaatggggaggcag-------cgtggggg-tacagaggatacaggagaaggtg 111 ||||||||||||||||||||| |||||||| ||||||||||||||||||||||| Sbjct: 3353 caaatgggaatggggaggcagtgggggccgtggggggtacagaggatacaggagaaggtg 3294 Query: 112 gcatctgaggagaatatatacagtacatgagggatttagaagcaagcatgcttccctcct 171 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3293 gcatttgaggagaatatatacagtacatgagggatttagaagcaagcatgcttccctcct 3234 Query: 172 acaggaagcatcataacttcttgacacagtatcacagttcacacaccaggatcgtcatca 231 ||||||||||| |||||||| |||| || ||||| ||||||||||||||||| Sbjct: 3233 acaggaagcatgataacttc---acactgtttcaca-------caccaggatcgtcatca 3184 Query: 232 tcaaaagattacgcggtcgcagctgcagcttcctccgccacct------cctgctgcaga 285 ||| ||||||||||||| ||||||||||||||||| ||||||| ||||||||||| Sbjct: 3183 tcagaagattacgcggtggcagctgcagcttcctctgccacctgggatgcctgctgcaga 3124 Query: 286 gtgcagatcaggttgcgatccccgtacacgttgtccacacgacatgttgttggccagaac 345 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3123 gtgcagatcaggttgcgatccccgtacacgttgtccacacgacatgttgttggccagaac 3064 Query: 346 ttggcaccacgaagccacgccgcggggaatgcagcatactccctggagtatggcttagtc 405 |||||||||||||||||||| |||||||| |||||||||||||| ||||||||||||||| Sbjct: 3063 ttggcaccacgaagccacgcggcggggaacgcagcatactccctagagtatggcttagtc 3004 Query: 406 catgcatcacccatcaggatttggggtgggtgaggagcacccttc 450 ||||| ||||||||||||| |||||||||||||||||| |||||| Sbjct: 3003 catgcgtcacccatcaggagttggggtgggtgaggagcgcccttc 2959
>gb|U11693.1|ASU11693 Avena sativa victorin binding protein mRNA, complete cds Length = 3408 Score = 490 bits (247), Expect = e-135 Identities = 408/458 (89%), Gaps = 18/458 (3%) Strand = Plus / Minus Query: 1 ttatttttcctgtattn-gagaagagtagaaatgctagccaatatagctaatttcacttt 59 |||||||||||||||| |||||||||| ||||||||||||||||||||||| ||||||| Sbjct: 3400 ttatttttcctgtattcagagaagagtacaaatgctagccaatatagctaatatcacttt 3341 Query: 60 caaatgggaatggggaggcagcg-tgggggtacagaggatacaggagaaggtggcatctg 118 ||||||||||||||| | ||| | ||| ||||||| |||||||||| ||||||||||| Sbjct: 3340 taaatgggaatggggaag--gcgatagggatacagag-atacaggagagggtggcatctg 3284 Query: 119 aggagaatatatacagtacatgagggatttagaagcaagcatgcttccctcctacaggaa 178 |||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||| Sbjct: 3283 aggagaatatatacagtacatgagagattgagaagcaagcatgcttccctcctacaggaa 3224 Query: 179 gcatcataacttcttgacacagtatcacagttcacacaccaggatcgtcatcatcaaaag 238 |||| ||||||||| |||| || ||||||||||| |||||||||||||| | Sbjct: 3223 gcattgtaacttctttacactgt-------ttcacacaccaagatcgtcatcatcaggat 3171 Query: 239 attacgcggtcgcagctgcagcttcctccgccacct------cctgctgcagagtgcaga 292 |||||||||| ||||||||||||||||| ||||| | |||||||||||||||| | Sbjct: 3170 attacgcggtagcagctgcagcttcctctgccacttgggatgcctgctgcagagtgcata 3111 Query: 293 tcaggttgcgatccccgtacacgttgtccacacgacatgttgttggccagaacttggcac 352 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3110 tgaggttgcgatccccgtacacgttgtccacacgacatgttgttggccagaacttggcac 3051 Query: 353 cacgaagccacgccgcggggaatgcagcatactccctggagtatggcttagtccatgcat 412 | |||||||| ||||| |||||||| || ||||||||||||||||||||||||||||| | Sbjct: 3050 cccgaagccatgccgcagggaatgcggcgtactccctggagtatggcttagtccatgcgt 2991 Query: 413 cacccatcaggatttggggtgggtgaggagcacccttc 450 ||| |||||||| |||||||||||||||||| |||||| Sbjct: 2990 cactcatcaggagttggggtgggtgaggagcgcccttc 2953
>emb|AJ635205.1| Triticum durum ssp. durum partial mRNA for putative glycine decarboxylase P subunit (gly1 gene) Length = 297 Score = 404 bits (204), Expect = e-109 Identities = 278/303 (91%), Gaps = 16/303 (5%) Strand = Plus / Minus Query: 93 gaggatacaggagaaggtggcatctgaggagaatatatacagtacatgagggatttagaa 152 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 296 gaggatacaggagaaggtggcatttgaggagaatatatacagtacatgagggatttagaa 237 Query: 153 gcaagcatgcttccctcctacaggaagcatcataacttcttgacacagtatcacagttca 212 |||||||||||||||||||||||||||||| |||||||| |||| || ||||| Sbjct: 236 gcaagcatgcttccctcctacaggaagcatgataacttc---acactgtttcaca----- 185 Query: 213 cacaccaggatcgtcatcatcaaaagattacgcggtcgcagctgcagcttcctccgccac 272 |||||||||||||||||||| ||||||||||||| ||||||||||||||||| ||||| Sbjct: 184 --caccaggatcgtcatcatcagaagattacgcggtggcagctgcagcttcctctgccac 127 Query: 273 ct------cctgctgcagagtgcagatcaggttgcgatccccgtacacgttgtccacacg 326 || |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 126 ctgggatgcctgctgcagagtgcagatcaggttgcgatccccgtacacgttgtccacacg 67 Query: 327 acatgttgttggccagaacttggcaccacgaagccacgccgcggggaatgcagcatactc 386 ||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||| Sbjct: 66 acatgttgttggccagaacttggcaccacgaagccacgcggcggggaacgcagcatactc 7 Query: 387 cct 389 ||| Sbjct: 6 cct 4
>dbj|AK111934.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-019-E12, full insert sequence Length = 823 Score = 204 bits (103), Expect = 2e-49 Identities = 154/171 (90%) Strand = Plus / Minus Query: 275 cctgctgcagagtgcagatcaggttgcgatccccgtacacgttgtccacacgacatgttg 334 |||| |||||||||||||| |||||||||||||||||||| |||||||| |||||||||| Sbjct: 555 cctgttgcagagtgcagatgaggttgcgatccccgtacacattgtccacgcgacatgttg 496 Query: 335 ttggccagaacttggcaccacgaagccacgccgcggggaatgcagcatactccctggagt 394 |||||||||||||||| || ||||||||||| || ||||| ||||||||||||||||||| Sbjct: 495 ttggccagaacttggcgccccgaagccacgctgcagggaacgcagcatactccctggagt 436 Query: 395 atggcttagtccatgcatcacccatcaggatttggggtgggtgaggagcac 445 | ||||||||||||| || | |||||| | |||||| ||||||||||||| Sbjct: 435 acggcttagtccatgagtcgctcatcagaagttggggcgggtgaggagcac 385 Score = 48.1 bits (24), Expect = 0.025 Identities = 24/24 (100%) Strand = Plus / Minus Query: 159 atgcttccctcctacaggaagcat 182 |||||||||||||||||||||||| Sbjct: 670 atgcttccctcctacaggaagcat 647 Score = 46.1 bits (23), Expect = 0.098 Identities = 26/27 (96%) Strand = Plus / Minus Query: 98 tacaggagaaggtggcatctgaggaga 124 ||||||||||||||||| ||||||||| Sbjct: 756 tacaggagaaggtggcagctgaggaga 730 Score = 44.1 bits (22), Expect = 0.39 Identities = 40/46 (86%) Strand = Plus / Minus Query: 30 aatgctagccaatatagctaatttcactttcaaatgggaatgggga 75 |||||||| ||||| |||||||||||| || || ||||||||||| Sbjct: 820 aatgctagtcaataaagctaatttcacctttgaacgggaatgggga 775
>dbj|AK111644.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013129F05, full insert sequence Length = 1836 Score = 204 bits (103), Expect = 2e-49 Identities = 154/171 (90%) Strand = Plus / Minus Query: 275 cctgctgcagagtgcagatcaggttgcgatccccgtacacgttgtccacacgacatgttg 334 |||| |||||||||||||| |||||||||||||||||||| |||||||| |||||||||| Sbjct: 1485 cctgttgcagagtgcagatgaggttgcgatccccgtacacattgtccacgcgacatgttg 1426 Query: 335 ttggccagaacttggcaccacgaagccacgccgcggggaatgcagcatactccctggagt 394 |||||||||||||||| || ||||||||||| || ||||| ||||||||||||||||||| Sbjct: 1425 ttggccagaacttggcgccccgaagccacgctgcagggaacgcagcatactccctggagt 1366 Query: 395 atggcttagtccatgcatcacccatcaggatttggggtgggtgaggagcac 445 | ||||||||||||| || | |||||| | |||||| ||||||||||||| Sbjct: 1365 acggcttagtccatgagtcgctcatcagaagttggggcgggtgaggagcac 1315 Score = 48.1 bits (24), Expect = 0.025 Identities = 24/24 (100%) Strand = Plus / Minus Query: 159 atgcttccctcctacaggaagcat 182 |||||||||||||||||||||||| Sbjct: 1600 atgcttccctcctacaggaagcat 1577 Score = 46.1 bits (23), Expect = 0.098 Identities = 44/51 (86%) Strand = Plus / Minus Query: 25 gtagaaatgctagccaatatagctaatttcactttcaaatgggaatgggga 75 |||| |||||||| ||||| |||||||||||| || || ||||||||||| Sbjct: 1755 gtagcaatgctagtcaataaagctaatttcacctttgaacgggaatgggga 1705 Score = 46.1 bits (23), Expect = 0.098 Identities = 26/27 (96%) Strand = Plus / Minus Query: 98 tacaggagaaggtggcatctgaggaga 124 ||||||||||||||||| ||||||||| Sbjct: 1686 tacaggagaaggtggcagctgaggaga 1660
>ref|NM_191707.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 3102 Score = 188 bits (95), Expect = 1e-44 Identities = 152/171 (88%) Strand = Plus / Minus Query: 275 cctgctgcagagtgcagatcaggttgcgatccccgtacacgttgtccacacgacatgttg 334 |||| |||||||||||||| |||||||||||||| ||||| |||||||| |||||||||| Sbjct: 3061 cctgttgcagagtgcagatgaggttgcgatccccatacacattgtccacgcgacatgttg 3002 Query: 335 ttggccagaacttggcaccacgaagccacgccgcggggaatgcagcatactccctggagt 394 |||||||||||||||| || ||||||||||| || ||||| ||||| ||||||||||||| Sbjct: 3001 ttggccagaacttggcgccccgaagccacgctgcagggaacgcagcgtactccctggagt 2942 Query: 395 atggcttagtccatgcatcacccatcaggatttggggtgggtgaggagcac 445 | ||||||||||||| || | |||||| | |||||| ||||||||||||| Sbjct: 2941 acggcttagtccatgagtcgctcatcagaagttggggcgggtgaggagcac 2891
>gb|AY346327.1| Oryza sativa (japonica cultivar-group) glycine dehydrogenase P protein mRNA, complete cds Length = 3102 Score = 188 bits (95), Expect = 1e-44 Identities = 152/171 (88%) Strand = Plus / Minus Query: 275 cctgctgcagagtgcagatcaggttgcgatccccgtacacgttgtccacacgacatgttg 334 |||| |||||||||||||| |||||||||||||| ||||| |||||||| |||||||||| Sbjct: 3061 cctgttgcagagtgcagatgaggttgcgatccccatacacattgtccacgcgacatgttg 3002 Query: 335 ttggccagaacttggcaccacgaagccacgccgcggggaatgcagcatactccctggagt 394 |||||||||||||||| || ||||||||||| || ||||| ||||| ||||||||||||| Sbjct: 3001 ttggccagaacttggcgccccgaagccacgctgcagggaacgcagcgtactccctggagt 2942 Query: 395 atggcttagtccatgcatcacccatcaggatttggggtgggtgaggagcac 445 | ||||||||||||| || | |||||| | |||||| ||||||||||||| Sbjct: 2941 acggcttagtccatgagtcgctcatcagaagttggggcgggtgaggagcac 2891
>dbj|AK111968.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-204-B09, full insert sequence Length = 1194 Score = 188 bits (95), Expect = 1e-44 Identities = 152/171 (88%) Strand = Plus / Minus Query: 275 cctgctgcagagtgcagatcaggttgcgatccccgtacacgttgtccacacgacatgttg 334 |||| |||||||||||||| |||||||||||||| ||||| |||||||| |||||||||| Sbjct: 936 cctgttgcagagtgcagatgaggttgcgatccccatacacattgtccacgcgacatgttg 877 Query: 335 ttggccagaacttggcaccacgaagccacgccgcggggaatgcagcatactccctggagt 394 |||||||||||||||| || ||||||||||| || ||||| ||||| ||||||||||||| Sbjct: 876 ttggccagaacttggcgccccgaagccacgctgcagggaacgcagcgtactccctggagt 817 Query: 395 atggcttagtccatgcatcacccatcaggatttggggtgggtgaggagcac 445 | ||||||||||||| || | |||||| | |||||| ||||||||||||| Sbjct: 816 acggcttagtccatgagtcgctcatcagaagttggggcgggtgaggagcac 766 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Minus Query: 156 agcatgcttccctcctacaggaagcatcataacttcttg 194 ||||||||||||||||||||||||||| || |||||||| Sbjct: 1051 agcatgcttccctcctacaggaagcattatgacttcttg 1013 Score = 46.1 bits (23), Expect = 0.098 Identities = 26/27 (96%) Strand = Plus / Minus Query: 98 tacaggagaaggtggcatctgaggaga 124 ||||||||||||||||| ||||||||| Sbjct: 1139 tacaggagaaggtggcagctgaggaga 1113
>gb|AY103920.1| Zea mays PCO082698 mRNA sequence Length = 2092 Score = 174 bits (88), Expect = 2e-40 Identities = 154/176 (87%) Strand = Plus / Minus Query: 275 cctgctgcagagtgcagatcaggttgcgatccccgtacacgttgtccacacgacatgttg 334 |||||||||| |||||||| |||||||| |||||||| |||||||||||||||| |||| Sbjct: 1711 cctgctgcagcgtgcagatgaggttgcggtccccgtagacgttgtccacacgaccagttg 1652 Query: 335 ttggccagaacttggcaccacgaagccacgccgcggggaatgcagcatactccctggagt 394 |||||||||||||||| || || ||||| ||||||||||| ||||| ||||||||||| | Sbjct: 1651 ttggccagaacttggcgccccggagccatgccgcggggaacgcagcgtactccctggaat 1592 Query: 395 atggcttagtccatgcatcacccatcaggatttggggtgggtgaggagcacccttc 450 | ||||| |||||| |||||||||| || ||| |||||||||||||| |||||| Sbjct: 1591 acggcttgctccatgtgtcacccatcaagagttgcggtgggtgaggagcgcccttc 1536 Score = 48.1 bits (24), Expect = 0.025 Identities = 24/24 (100%) Strand = Plus / Minus Query: 159 atgcttccctcctacaggaagcat 182 |||||||||||||||||||||||| Sbjct: 1845 atgcttccctcctacaggaagcat 1822
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 133 bits (67), Expect = 5e-28 Identities = 106/119 (89%) Strand = Plus / Plus Query: 327 acatgttgttggccagaacttggcaccacgaagccacgccgcggggaatgcagcatactc 386 |||||||||||||||||||||||| || ||||||||||| || ||||| ||||||||||| Sbjct: 24016406 acatgttgttggccagaacttggcgccccgaagccacgctgcagggaacgcagcatactc 24016465 Query: 387 cctggagtatggcttagtccatgcatcacccatcaggatttggggtgggtgaggagcac 445 ||||||||| ||||||||||||| || | |||||| | |||||| ||||||||||||| Sbjct: 24016466 cctggagtacggcttagtccatgagtcgctcatcagaagttggggcgggtgaggagcac 24016524 Score = 75.8 bits (38), Expect = 1e-10 Identities = 50/54 (92%) Strand = Plus / Plus Query: 275 cctgctgcagagtgcagatcaggttgcgatccccgtacacgttgtccacacgac 328 |||| |||||||||||||| |||||||||||||||||||| |||||||| |||| Sbjct: 24016245 cctgttgcagagtgcagatgaggttgcgatccccgtacacattgtccacgcgac 24016298 Score = 48.1 bits (24), Expect = 0.025 Identities = 24/24 (100%) Strand = Plus / Plus Query: 159 atgcttccctcctacaggaagcat 182 |||||||||||||||||||||||| Sbjct: 24016130 atgcttccctcctacaggaagcat 24016153 Score = 46.1 bits (23), Expect = 0.098 Identities = 26/27 (96%) Strand = Plus / Plus Query: 98 tacaggagaaggtggcatctgaggaga 124 ||||||||||||||||| ||||||||| Sbjct: 24016044 tacaggagaaggtggcagctgaggaga 24016070 Score = 46.1 bits (23), Expect = 0.098 Identities = 44/51 (86%) Strand = Plus / Plus Query: 25 gtagaaatgctagccaatatagctaatttcactttcaaatgggaatgggga 75 |||| |||||||| ||||| |||||||||||| || || ||||||||||| Sbjct: 24015975 gtagcaatgctagtcaataaagctaatttcacctttgaacgggaatgggga 24016025 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 262 tcctccgccacctcctgctgca 283 |||||||||||||||||||||| Sbjct: 23668923 tcctccgccacctcctgctgca 23668902 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 262 tcctccgccacctcctgctgca 283 |||||||||||||||||||||| Sbjct: 18880376 tcctccgccacctcctgctgca 18880397 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 262 tcctccgccacctcctgctgca 283 |||||||||||||||||||||| Sbjct: 18880340 tcctccgccacctcctgctgca 18880361
>dbj|AP003616.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0490F09 Length = 149542 Score = 133 bits (67), Expect = 5e-28 Identities = 106/119 (89%) Strand = Plus / Plus Query: 327 acatgttgttggccagaacttggcaccacgaagccacgccgcggggaatgcagcatactc 386 |||||||||||||||||||||||| || ||||||||||| || ||||| ||||||||||| Sbjct: 146017 acatgttgttggccagaacttggcgccccgaagccacgctgcagggaacgcagcatactc 146076 Query: 387 cctggagtatggcttagtccatgcatcacccatcaggatttggggtgggtgaggagcac 445 ||||||||| ||||||||||||| || | |||||| | |||||| ||||||||||||| Sbjct: 146077 cctggagtacggcttagtccatgagtcgctcatcagaagttggggcgggtgaggagcac 146135 Score = 75.8 bits (38), Expect = 1e-10 Identities = 50/54 (92%) Strand = Plus / Plus Query: 275 cctgctgcagagtgcagatcaggttgcgatccccgtacacgttgtccacacgac 328 |||| |||||||||||||| |||||||||||||||||||| |||||||| |||| Sbjct: 145856 cctgttgcagagtgcagatgaggttgcgatccccgtacacattgtccacgcgac 145909 Score = 48.1 bits (24), Expect = 0.025 Identities = 24/24 (100%) Strand = Plus / Plus Query: 159 atgcttccctcctacaggaagcat 182 |||||||||||||||||||||||| Sbjct: 145741 atgcttccctcctacaggaagcat 145764 Score = 46.1 bits (23), Expect = 0.098 Identities = 26/27 (96%) Strand = Plus / Plus Query: 98 tacaggagaaggtggcatctgaggaga 124 ||||||||||||||||| ||||||||| Sbjct: 145655 tacaggagaaggtggcagctgaggaga 145681 Score = 46.1 bits (23), Expect = 0.098 Identities = 44/51 (86%) Strand = Plus / Plus Query: 25 gtagaaatgctagccaatatagctaatttcactttcaaatgggaatgggga 75 |||| |||||||| ||||| |||||||||||| || || ||||||||||| Sbjct: 145586 gtagcaatgctagtcaataaagctaatttcacctttgaacgggaatgggga 145636
>dbj|AP003626.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0429G06 Length = 158321 Score = 133 bits (67), Expect = 5e-28 Identities = 106/119 (89%) Strand = Plus / Plus Query: 327 acatgttgttggccagaacttggcaccacgaagccacgccgcggggaatgcagcatactc 386 |||||||||||||||||||||||| || ||||||||||| || ||||| ||||||||||| Sbjct: 26099 acatgttgttggccagaacttggcgccccgaagccacgctgcagggaacgcagcatactc 26158 Query: 387 cctggagtatggcttagtccatgcatcacccatcaggatttggggtgggtgaggagcac 445 ||||||||| ||||||||||||| || | |||||| | |||||| ||||||||||||| Sbjct: 26159 cctggagtacggcttagtccatgagtcgctcatcagaagttggggcgggtgaggagcac 26217 Score = 75.8 bits (38), Expect = 1e-10 Identities = 50/54 (92%) Strand = Plus / Plus Query: 275 cctgctgcagagtgcagatcaggttgcgatccccgtacacgttgtccacacgac 328 |||| |||||||||||||| |||||||||||||||||||| |||||||| |||| Sbjct: 25938 cctgttgcagagtgcagatgaggttgcgatccccgtacacattgtccacgcgac 25991 Score = 48.1 bits (24), Expect = 0.025 Identities = 24/24 (100%) Strand = Plus / Plus Query: 159 atgcttccctcctacaggaagcat 182 |||||||||||||||||||||||| Sbjct: 25823 atgcttccctcctacaggaagcat 25846 Score = 46.1 bits (23), Expect = 0.098 Identities = 26/27 (96%) Strand = Plus / Plus Query: 98 tacaggagaaggtggcatctgaggaga 124 ||||||||||||||||| ||||||||| Sbjct: 25737 tacaggagaaggtggcagctgaggaga 25763 Score = 46.1 bits (23), Expect = 0.098 Identities = 44/51 (86%) Strand = Plus / Plus Query: 25 gtagaaatgctagccaatatagctaatttcactttcaaatgggaatgggga 75 |||| |||||||| ||||| |||||||||||| || || ||||||||||| Sbjct: 25668 gtagcaatgctagtcaataaagctaatttcacctttgaacgggaatgggga 25718
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 125 bits (63), Expect = 1e-25 Identities = 105/119 (88%) Strand = Plus / Minus Query: 327 acatgttgttggccagaacttggcaccacgaagccacgccgcggggaatgcagcatactc 386 |||||||||||||||||||||||| || ||||||||||| || ||||| ||||| ||||| Sbjct: 29559434 acatgttgttggccagaacttggcgccccgaagccacgctgcagggaacgcagcgtactc 29559375 Query: 387 cctggagtatggcttagtccatgcatcacccatcaggatttggggtgggtgaggagcac 445 ||||||||| ||||||||||||| || | |||||| | |||||| ||||||||||||| Sbjct: 29559374 cctggagtacggcttagtccatgagtcgctcatcagaagttggggcgggtgaggagcac 29559316 Score = 67.9 bits (34), Expect = 3e-08 Identities = 49/54 (90%) Strand = Plus / Minus Query: 275 cctgctgcagagtgcagatcaggttgcgatccccgtacacgttgtccacacgac 328 |||| |||||||||||||| |||||||||||||| ||||| |||||||| |||| Sbjct: 29559584 cctgttgcagagtgcagatgaggttgcgatccccatacacattgtccacgcgac 29559531 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Minus Query: 156 agcatgcttccctcctacaggaagcatcataacttcttg 194 ||||||||||||||||||||||||||| || |||||||| Sbjct: 29559699 agcatgcttccctcctacaggaagcattatgacttcttg 29559661 Score = 46.1 bits (23), Expect = 0.098 Identities = 44/51 (86%) Strand = Plus / Minus Query: 25 gtagaaatgctagccaatatagctaatttcactttcaaatgggaatgggga 75 |||| |||||||| ||||| |||||||||||| || || ||||||||||| Sbjct: 29559856 gtagcaatgctagtcaataaagctaatttcacctttgaacgggaatgggga 29559806 Score = 46.1 bits (23), Expect = 0.098 Identities = 26/27 (96%) Strand = Plus / Minus Query: 98 tacaggagaaggtggcatctgaggaga 124 ||||||||||||||||| ||||||||| Sbjct: 29559787 tacaggagaaggtggcagctgaggaga 29559761 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 262 tcctccgccacctcctgctgca 283 |||||||||||||||||||||| Sbjct: 11397743 tcctccgccacctcctgctgca 11397722 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 262 tcctccgccacctcctgctgca 283 |||||||||||||||||||||| Sbjct: 11099547 tcctccgccacctcctgctgca 11099526 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 262 tcctccgccacctcctgctgca 283 |||||||||||||||||||||| Sbjct: 10179925 tcctccgccacctcctgctgca 10179946
>dbj|AP003410.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1142C05 Length = 151457 Score = 125 bits (63), Expect = 1e-25 Identities = 105/119 (88%) Strand = Plus / Minus Query: 327 acatgttgttggccagaacttggcaccacgaagccacgccgcggggaatgcagcatactc 386 |||||||||||||||||||||||| || ||||||||||| || ||||| ||||| ||||| Sbjct: 29254 acatgttgttggccagaacttggcgccccgaagccacgctgcagggaacgcagcgtactc 29195 Query: 387 cctggagtatggcttagtccatgcatcacccatcaggatttggggtgggtgaggagcac 445 ||||||||| ||||||||||||| || | |||||| | |||||| ||||||||||||| Sbjct: 29194 cctggagtacggcttagtccatgagtcgctcatcagaagttggggcgggtgaggagcac 29136 Score = 67.9 bits (34), Expect = 3e-08 Identities = 49/54 (90%) Strand = Plus / Minus Query: 275 cctgctgcagagtgcagatcaggttgcgatccccgtacacgttgtccacacgac 328 |||| |||||||||||||| |||||||||||||| ||||| |||||||| |||| Sbjct: 29404 cctgttgcagagtgcagatgaggttgcgatccccatacacattgtccacgcgac 29351 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Minus Query: 156 agcatgcttccctcctacaggaagcatcataacttcttg 194 ||||||||||||||||||||||||||| || |||||||| Sbjct: 29519 agcatgcttccctcctacaggaagcattatgacttcttg 29481 Score = 46.1 bits (23), Expect = 0.098 Identities = 44/51 (86%) Strand = Plus / Minus Query: 25 gtagaaatgctagccaatatagctaatttcactttcaaatgggaatgggga 75 |||| |||||||| ||||| |||||||||||| || || ||||||||||| Sbjct: 29676 gtagcaatgctagtcaataaagctaatttcacctttgaacgggaatgggga 29626 Score = 46.1 bits (23), Expect = 0.098 Identities = 26/27 (96%) Strand = Plus / Minus Query: 98 tacaggagaaggtggcatctgaggaga 124 ||||||||||||||||| ||||||||| Sbjct: 29607 tacaggagaaggtggcagctgaggaga 29581
>dbj|AP002901.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0456F08 Length = 156850 Score = 125 bits (63), Expect = 1e-25 Identities = 105/119 (88%) Strand = Plus / Minus Query: 327 acatgttgttggccagaacttggcaccacgaagccacgccgcggggaatgcagcatactc 386 |||||||||||||||||||||||| || ||||||||||| || ||||| ||||| ||||| Sbjct: 125708 acatgttgttggccagaacttggcgccccgaagccacgctgcagggaacgcagcgtactc 125649 Query: 387 cctggagtatggcttagtccatgcatcacccatcaggatttggggtgggtgaggagcac 445 ||||||||| ||||||||||||| || | |||||| | |||||| ||||||||||||| Sbjct: 125648 cctggagtacggcttagtccatgagtcgctcatcagaagttggggcgggtgaggagcac 125590 Score = 67.9 bits (34), Expect = 3e-08 Identities = 49/54 (90%) Strand = Plus / Minus Query: 275 cctgctgcagagtgcagatcaggttgcgatccccgtacacgttgtccacacgac 328 |||| |||||||||||||| |||||||||||||| ||||| |||||||| |||| Sbjct: 125858 cctgttgcagagtgcagatgaggttgcgatccccatacacattgtccacgcgac 125805 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Minus Query: 156 agcatgcttccctcctacaggaagcatcataacttcttg 194 ||||||||||||||||||||||||||| || |||||||| Sbjct: 125973 agcatgcttccctcctacaggaagcattatgacttcttg 125935 Score = 46.1 bits (23), Expect = 0.098 Identities = 44/51 (86%) Strand = Plus / Minus Query: 25 gtagaaatgctagccaatatagctaatttcactttcaaatgggaatgggga 75 |||| |||||||| ||||| |||||||||||| || || ||||||||||| Sbjct: 126130 gtagcaatgctagtcaataaagctaatttcacctttgaacgggaatgggga 126080 Score = 46.1 bits (23), Expect = 0.098 Identities = 26/27 (96%) Strand = Plus / Minus Query: 98 tacaggagaaggtggcatctgaggaga 124 ||||||||||||||||| ||||||||| Sbjct: 126061 tacaggagaaggtggcagctgaggaga 126035
>emb|Z25857.1|FPPSGDC F.pringlei mRNA for P subunit of glycine decarboxylase multi-enzyme complex Length = 3394 Score = 87.7 bits (44), Expect = 3e-14 Identities = 71/80 (88%) Strand = Plus / Minus Query: 283 agagtgcagatcaggttgcgatccccgtacacgttgtccacacgacatgttgttggccag 342 ||||||||||| ||||||||||| || ||||| ||||||||||| ||||| || |||||| Sbjct: 3162 agagtgcagatgaggttgcgatcaccatacacattgtccacacggcatgtagtaggccag 3103 Query: 343 aacttggcaccacgaagcca 362 ||||| ||| |||||||||| Sbjct: 3102 aacttagcagcacgaagcca 3083
>emb|X59773.1|PSGDPP Pisum sativum mRNA for P protein, a part of glycine cleavage complex Length = 3404 Score = 83.8 bits (42), Expect = 5e-13 Identities = 105/126 (83%) Strand = Plus / Minus Query: 294 caggttgcgatccccgtacacgttgtccacacgacatgttgttggccagaacttggcacc 353 ||||||||| || || ||||| || || ||||| | ||| || ||||| ||||| ||||| Sbjct: 3193 caggttgcggtcaccatacacattatcaacacgtcctgtggtaggccaaaactttgcacc 3134 Query: 354 acgaagccacgccgcggggaatgcagcatactccctggagtatggcttagtccatgcatc 413 ||| ||||| || || ||||| || |||||||||||||||||||| || ||||||||||| Sbjct: 3133 acggagccatgcagctgggaaggctgcatactccctggagtatggtttggtccatgcatc 3074 Query: 414 acccat 419 | |||| Sbjct: 3073 agccat 3068
>emb|X54377.1|PSGDCPG P.sativum gdcP gene for P-protein of glycine decarboxylase enzyme complex Length = 708 Score = 83.8 bits (42), Expect = 5e-13 Identities = 105/126 (83%) Strand = Plus / Minus Query: 294 caggttgcgatccccgtacacgttgtccacacgacatgttgttggccagaacttggcacc 353 ||||||||| || || ||||| || || ||||| | ||| || ||||| ||||| ||||| Sbjct: 402 caggttgcggtcaccatacacattatcaacacgtcctgtggtaggccaaaactttgcacc 343 Query: 354 acgaagccacgccgcggggaatgcagcatactccctggagtatggcttagtccatgcatc 413 ||| ||||| || || ||||| || |||||||||||||||||||| || ||||||||||| Sbjct: 342 acggagccatgcagctgggaaggctgcatactccctggagtatggtttggtccatgcatc 283 Query: 414 acccat 419 | |||| Sbjct: 282 agccat 277
>gb|AY495085.1| Oryza sativa (indica cultivar-group) glycine dehydrogenase P protein (GDC) mRNA, complete cds Length = 2679 Score = 77.8 bits (39), Expect = 3e-11 Identities = 51/55 (92%) Strand = Plus / Minus Query: 275 cctgctgcagagtgcagatcaggttgcgatccccgtacacgttgtccacacgaca 329 |||| |||||||||||||| |||||||||||||||||||| |||||||| ||||| Sbjct: 2638 cctgttgcagagtgcagatgaggttgcgatccccgtacacattgtccacgcgaca 2584
>emb|Z99770.1|STZ99770 Solanum tuberosum cv. Desire mRNA for P-protein Length = 3381 Score = 71.9 bits (36), Expect = 2e-09 Identities = 105/128 (82%) Strand = Plus / Minus Query: 286 gtgcagatcaggttgcgatccccgtacacgttgtccacacgacatgttgttggccagaac 345 |||||||||||||||||||| || ||||| |||||||| || | ||| ||||||||||| Sbjct: 3103 gtgcagatcaggttgcgatctccatacacattgtccactcgtcctgtagttggccagaat 3044 Query: 346 ttggcaccacgaagccacgccgcggggaatgcagcatactccctggagtatggcttagtc 405 ||||||| | ||||| | || ||| |||||||||| |||| || ||||| || ||| Sbjct: 3043 ttggcactccttagccagggagcagggtatgcagcatattcccgagaatatggttttgtc 2984 Query: 406 catgcatc 413 |||||||| Sbjct: 2983 catgcatc 2976
>emb|Z36879.1|FPGDCPA F.pringlei gdcsPA gene for P-protein of the glycine cleavage system Length = 8496 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Minus Query: 283 agagtgcagatcaggttgcgatccccgtacacgttgtccacacg 326 ||||||||||| ||||||||||| || ||||| ||||||||||| Sbjct: 7631 agagtgcagatgaggttgcgatcaccatacacattgtccacacg 7588 Score = 40.1 bits (20), Expect = 6.1 Identities = 32/36 (88%) Strand = Plus / Minus Query: 327 acatgttgttggccagaacttggcaccacgaagcca 362 |||||| || ||||||||||| ||| |||||||||| Sbjct: 7351 acatgtagtaggccagaacttagcagcacgaagcca 7316
>gb|AC124968.36| Medicago truncatula clone mth2-15e21, complete sequence Length = 106968 Score = 54.0 bits (27), Expect = 4e-04 Identities = 69/83 (83%) Strand = Plus / Plus Query: 337 ggccagaacttggcaccacgaagccacgccgcggggaatgcagcatactccctggagtat 396 ||||| ||||| ||| |||| ||||| | || ||||| || ||||| |||||||| ||| Sbjct: 68149 ggccaaaactttgcaacacggagccatggagcagggaaggctgcatattccctggaatat 68208 Query: 397 ggcttagtccatgcatcacccat 419 ||||| |||||||||||| |||| Sbjct: 68209 ggctttgtccatgcatcagccat 68231 Score = 50.1 bits (25), Expect = 0.006 Identities = 40/45 (88%) Strand = Plus / Plus Query: 370 gggaatgcagcatactccctggagtatggcttagtccatgcatca 414 ||||| || |||||||||||||| ||||| || |||||||||||| Sbjct: 44435 gggaaggctgcatactccctggattatggttttgtccatgcatca 44479
>emb|AJ270963.1|LES270963 Lycopersicon esculentum partial mRNA for putative glycine decarboxylase p-protein, clone mo6-20G1 Length = 364 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 286 gtgcagatcaggttgcgatccccgtacacgttgtccac 323 |||||||||||||||||||| || ||||| |||||||| Sbjct: 57 gtgcagatcaggttgcgatctccatacacattgtccac 20
>emb|Z99767.1|FTZ99767 Flaveria trinervia gdcsP gene Length = 7398 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Minus Query: 283 agagtgcagatcaggttgcgatccccgtacacgttgtccacacgac 328 ||||||||||| |||||||| || || ||||| ||||||||||||| Sbjct: 7032 agagtgcagatgaggttgcggtctccatacacattgtccacacgac 6987
>emb|Z99762.1|FAZ99762 Flaveria anomala gdcsP gene Length = 8003 Score = 50.1 bits (25), Expect = 0.006 Identities = 43/49 (87%) Strand = Plus / Minus Query: 278 gctgcagagtgcagatcaggttgcgatccccgtacacgttgtccacacg 326 |||| ||||||||||| |||||||| || || ||||| ||||||||||| Sbjct: 7229 gctgaagagtgcagatgaggttgcggtctccatacacattgtccacacg 7181
>emb|Z54239.1|FPGDCSPB F.pringlei gdcsPB gene Length = 10187 Score = 48.1 bits (24), Expect = 0.025 Identities = 39/44 (88%) Strand = Plus / Minus Query: 283 agagtgcagatcaggttgcgatccccgtacacgttgtccacacg 326 ||||||||||| |||||||| || || ||||| ||||||||||| Sbjct: 8420 agagtgcagatgaggttgcggtctccatacacattgtccacacg 8377
>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome Length = 3696649 Score = 46.1 bits (23), Expect = 0.098 Identities = 32/35 (91%) Strand = Plus / Plus Query: 286 gtgcagatcaggttgcgatccccgtacacgttgtc 320 |||||||| ||||||||||| ||||| |||||||| Sbjct: 2058349 gtgcagatgaggttgcgatcgccgtagacgttgtc 2058383
>dbj|AP004486.1| Lotus japonicus genomic DNA, chromosome 5, clone:LjT05B20, TM0019a, complete sequence Length = 73833 Score = 46.1 bits (23), Expect = 0.098 Identities = 29/31 (93%) Strand = Plus / Plus Query: 383 actccctggagtatggcttagtccatgcatc 413 |||||||||||||||| || ||||||||||| Sbjct: 3122 actccctggagtatggttttgtccatgcatc 3152 Score = 42.1 bits (21), Expect = 1.5 Identities = 36/41 (87%) Strand = Plus / Plus Query: 286 gtgcagatcaggttgcgatccccgtacacgttgtccacacg 326 |||||||| |||||||| || || ||||||||||| ||||| Sbjct: 2478 gtgcagatgaggttgcggtcaccatacacgttgtcaacacg 2518
>ref|NM_195405.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNBa0056A15.9), mRNA Length = 2595 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 262 tcctccgccacctcctgctgca 283 |||||||||||||||||||||| Sbjct: 1470 tcctccgccacctcctgctgca 1491
>ref|XM_478034.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2724 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 262 tcctccgccacctcctgctgca 283 |||||||||||||||||||||| Sbjct: 1503 tcctccgccacctcctgctgca 1524
>ref|XM_472039.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 4047 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 262 tcctccgccacctcctgctgca 283 |||||||||||||||||||||| Sbjct: 2784 tcctccgccacctcctgctgca 2805
>ref|NM_187722.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2031 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 262 tcctccgccacctcctgctgca 283 |||||||||||||||||||||| Sbjct: 783 tcctccgccacctcctgctgca 804
>gb|AC145323.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0018N12, complete sequence Length = 137127 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 262 tcctccgccacctcctgctgca 283 |||||||||||||||||||||| Sbjct: 2415 tcctccgccacctcctgctgca 2394 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 262 tcctccgccacctcctgctgca 283 |||||||||||||||||||||| Sbjct: 2379 tcctccgccacctcctgctgca 2358
>gb|AC145321.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0094P07, complete sequence Length = 162311 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 262 tcctccgccacctcctgctgca 283 |||||||||||||||||||||| Sbjct: 142161 tcctccgccacctcctgctgca 142140 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 262 tcctccgccacctcctgctgca 283 |||||||||||||||||||||| Sbjct: 142125 tcctccgccacctcctgctgca 142104
>emb|AL731585.5| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0009K15, complete sequence Length = 185021 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 262 tcctccgccacctcctgctgca 283 |||||||||||||||||||||| Sbjct: 39926 tcctccgccacctcctgctgca 39905
>gb|AC146893.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone B1107B01, complete sequence Length = 160104 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 262 tcctccgccacctcctgctgca 283 |||||||||||||||||||||| Sbjct: 16104 tcctccgccacctcctgctgca 16125
>emb|Z84572.1|HS49J10 Human DNA sequence from clone RP1-49J10 on chromosome 13 Contains the 3' end of the gene for androgen-induced prostate proliferative shutoff associated protein (AS3) (CG008, FLJ23236, KIAA0979), complete sequence Length = 137246 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 93 gaggatacaggagaaggtggcatctg 118 ||||| |||||||||||||||||||| Sbjct: 19260 gaggacacaggagaaggtggcatctg 19235
>emb|AL354713.7| Human DNA sequence from clone RP11-498A13 on chromosome 1 Contains a processed pseudogene for nuclear receptor binding factor 2 (NRBF2), a processed pseudogene similar to part of olfactory receptor, family 11, subfamily H, member 6 (OR11H6) and the 5' end of the CD53 gene for CD53 antigen, complete sequence Length = 138370 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 93 gaggatacaggagaaggtggca 114 |||||||||||||||||||||| Sbjct: 18625 gaggatacaggagaaggtggca 18604
>emb|AL138820.11| Human DNA sequence from clone RP11-380B4 on chromosome 13 Contains the 3' end of the KIAA0979 gene and part of a novel gene, complete sequence Length = 168487 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 93 gaggatacaggagaaggtggcatctg 118 ||||| |||||||||||||||||||| Sbjct: 18746 gaggacacaggagaaggtggcatctg 18721
>gb|AC104615.9| Oryza sativa chromosome 10 BAC OSJNBa0056A15 genomic sequence, complete sequence Length = 150995 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 262 tcctccgccacctcctgctgca 283 |||||||||||||||||||||| Sbjct: 46203 tcctccgccacctcctgctgca 46182
>gb|AC010562.5| Drosophila melanogaster 3L BAC RP98-21K18 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 181528 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 57 tttcaaatgggaatggggaggc 78 |||||||||||||||||||||| Sbjct: 45580 tttcaaatgggaatggggaggc 45559
>tpg|BK000936.1| TPA: TPA_inf: Oryza sativa transposon Rim2-M330, complete sequence Length = 14030 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 262 tcctccgccacctcctgctgca 283 |||||||||||||||||||||| Sbjct: 8424 tcctccgccacctcctgctgca 8445
>tpg|BK000912.1| TPA: TPA_inf: Oryza sativa transposon Rim2-M305, complete sequence Length = 11131 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 262 tcctccgccacctcctgctgca 283 |||||||||||||||||||||| Sbjct: 2271 tcctccgccacctcctgctgca 2250
>tpg|BK000911.1| TPA: TPA_inf: Oryza sativa transposon Rim2-M314, complete sequence Length = 11291 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 262 tcctccgccacctcctgctgca 283 |||||||||||||||||||||| Sbjct: 2815 tcctccgccacctcctgctgca 2794
>tpg|BK000908.1| TPA: TPA_inf: Oryza sativa transposon Rim2-M312, complete sequence Length = 11198 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 262 tcctccgccacctcctgctgca 283 |||||||||||||||||||||| Sbjct: 2436 tcctccgccacctcctgctgca 2415
>tpg|BK000886.1| TPA: TPA_inf: Oryza sativa transposon Rim2-M274, complete sequence Length = 10151 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 262 tcctccgccacctcctgctgca 283 |||||||||||||||||||||| Sbjct: 2386 tcctccgccacctcctgctgca 2365
>tpg|BK000869.1| TPA: TPA_inf: Oryza sativa transposon Rim2-M266, complete sequence Length = 8882 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 262 tcctccgccacctcctgctgca 283 |||||||||||||||||||||| Sbjct: 6480 tcctccgccacctcctgctgca 6501
>tpg|BK000363.1| TPA: TPA_exp: Oryza sativa transposon Rim2-M83 transposase gene, complete cds Length = 18041 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 262 tcctccgccacctcctgctgca 283 |||||||||||||||||||||| Sbjct: 12432 tcctccgccacctcctgctgca 12453
>tpg|BK000336.1| TPA: TPA_exp: Oryza sativa transposon Rim2-M56 transposase gene, complete cds Length = 8074 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 262 tcctccgccacctcctgctgca 283 |||||||||||||||||||||| Sbjct: 2389 tcctccgccacctcctgctgca 2368
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 262 tcctccgccacctcctgctgca 283 |||||||||||||||||||||| Sbjct: 16985885 tcctccgccacctcctgctgca 16985906 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 262 tcctccgccacctcctgctgca 283 |||||||||||||||||||||| Sbjct: 11717139 tcctccgccacctcctgctgca 11717118
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 262 tcctccgccacctcctgctgca 283 |||||||||||||||||||||| Sbjct: 4133663 tcctccgccacctcctgctgca 4133684
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 262 tcctccgccacctcctgctgca 283 |||||||||||||||||||||| Sbjct: 5155334 tcctccgccacctcctgctgca 5155355 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 262 tcctccgccacctcctgctgca 283 |||||||||||||||||||||| Sbjct: 5155298 tcctccgccacctcctgctgca 5155319
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 262 tcctccgccacctcctgctgca 283 |||||||||||||||||||||| Sbjct: 6652873 tcctccgccacctcctgctgca 6652894
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 262 tcctccgccacctcctgctgca 283 |||||||||||||||||||||| Sbjct: 5511123 tcctccgccacctcctgctgca 5511102 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 262 tcctccgccacctcctgctgca 283 |||||||||||||||||||||| Sbjct: 5511087 tcctccgccacctcctgctgca 5511066 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 262 tcctccgccacctcctgctgca 283 |||||||||||||||||||||| Sbjct: 4840864 tcctccgccacctcctgctgca 4840843
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 262 tcctccgccacctcctgctgca 283 |||||||||||||||||||||| Sbjct: 21728838 tcctccgccacctcctgctgca 21728817 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 262 tcctccgccacctcctgctgca 283 |||||||||||||||||||||| Sbjct: 16701171 tcctccgccacctcctgctgca 16701150 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 262 tcctccgccacctcctgctgca 283 |||||||||||||||||||||| Sbjct: 16701135 tcctccgccacctcctgctgca 16701114 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 262 tcctccgccacctcctgctgca 283 |||||||||||||||||||||| Sbjct: 16595138 tcctccgccacctcctgctgca 16595159 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 262 tcctccgccacctcctgctgca 283 |||||||||||||||||||||| Sbjct: 11492513 tcctccgccacctcctgctgca 11492534
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 262 tcctccgccacctcctgctgca 283 |||||||||||||||||||||| Sbjct: 16788434 tcctccgccacctcctgctgca 16788413 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 262 tcctccgccacctcctgctgca 283 |||||||||||||||||||||| Sbjct: 1443647 tcctccgccacctcctgctgca 1443668 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 262 tcctccgccacctcctgctgca 283 |||||||||||||||||||||| Sbjct: 1410478 tcctccgccacctcctgctgca 1410499 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 262 tcctccgccacctcctgctgca 283 |||||||||||||||||||||| Sbjct: 1377327 tcctccgccacctcctgctgca 1377348 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 262 tcctccgccacctcctgctgca 283 |||||||||||||||||||||| Sbjct: 1344174 tcctccgccacctcctgctgca 1344195
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 262 tcctccgccacctcctgctgca 283 |||||||||||||||||||||| Sbjct: 22723671 tcctccgccacctcctgctgca 22723650 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 262 tcctccgccacctcctgctgca 283 |||||||||||||||||||||| Sbjct: 22723635 tcctccgccacctcctgctgca 22723614 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 262 tcctccgccacctcctgctgca 283 |||||||||||||||||||||| Sbjct: 9482425 tcctccgccacctcctgctgca 9482446 Score = 40.1 bits (20), Expect = 6.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 246 ggtcgcagctgcagcttcctccgccacctcct 277 ||||||||| || | ||||||||||||||||| Sbjct: 6144163 ggtcgcagccgctgtttcctccgccacctcct 6144194
>dbj|AP003578.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0682B08 Length = 138376 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 262 tcctccgccacctcctgctgca 283 |||||||||||||||||||||| Sbjct: 128429 tcctccgccacctcctgctgca 128408
>dbj|AP003631.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0581F09 Length = 154248 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 262 tcctccgccacctcctgctgca 283 |||||||||||||||||||||| Sbjct: 127394 tcctccgccacctcctgctgca 127415
>dbj|AP003020.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0498A12 Length = 159749 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 262 tcctccgccacctcctgctgca 283 |||||||||||||||||||||| Sbjct: 45239 tcctccgccacctcctgctgca 45260
>dbj|AP005383.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1034_C08 Length = 154441 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 262 tcctccgccacctcctgctgca 283 |||||||||||||||||||||| Sbjct: 46647 tcctccgccacctcctgctgca 46668
>dbj|AP003684.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0485D10 Length = 147464 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 262 tcctccgccacctcctgctgca 283 |||||||||||||||||||||| Sbjct: 45941 tcctccgccacctcctgctgca 45962 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 262 tcctccgccacctcctgctgca 283 |||||||||||||||||||||| Sbjct: 45905 tcctccgccacctcctgctgca 45926
>dbj|AP004683.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0006C08 Length = 151987 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 262 tcctccgccacctcctgctgca 283 |||||||||||||||||||||| Sbjct: 95986 tcctccgccacctcctgctgca 96007
>dbj|AP003567.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBb0022N24 Length = 124062 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 262 tcctccgccacctcctgctgca 283 |||||||||||||||||||||| Sbjct: 34941 tcctccgccacctcctgctgca 34920
>dbj|AP005547.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1031_C12 Length = 157574 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 262 tcctccgccacctcctgctgca 283 |||||||||||||||||||||| Sbjct: 116962 tcctccgccacctcctgctgca 116941 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 262 tcctccgccacctcctgctgca 283 |||||||||||||||||||||| Sbjct: 116926 tcctccgccacctcctgctgca 116905
>dbj|AP002873.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0552C05 Length = 136586 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 262 tcctccgccacctcctgctgca 283 |||||||||||||||||||||| Sbjct: 111328 tcctccgccacctcctgctgca 111307
>dbj|AP006446.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:B1097H10 Length = 159732 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 262 tcctccgccacctcctgctgca 283 |||||||||||||||||||||| Sbjct: 158468 tcctccgccacctcctgctgca 158447
>dbj|AP005903.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:B1012G11 Length = 167168 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 262 tcctccgccacctcctgctgca 283 |||||||||||||||||||||| Sbjct: 23396 tcctccgccacctcctgctgca 23375
>dbj|AP005446.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0029C06 Length = 156500 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 262 tcctccgccacctcctgctgca 283 |||||||||||||||||||||| Sbjct: 16999 tcctccgccacctcctgctgca 16978
>dbj|AP005309.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0474G09 Length = 169511 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 262 tcctccgccacctcctgctgca 283 |||||||||||||||||||||| Sbjct: 142162 tcctccgccacctcctgctgca 142183 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 262 tcctccgccacctcctgctgca 283 |||||||||||||||||||||| Sbjct: 109009 tcctccgccacctcctgctgca 109030
>dbj|AP006451.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:B1249D05 Length = 132526 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 262 tcctccgccacctcctgctgca 283 |||||||||||||||||||||| Sbjct: 29236 tcctccgccacctcctgctgca 29257
>dbj|AP005604.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1212_C12 Length = 147782 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 262 tcctccgccacctcctgctgca 283 |||||||||||||||||||||| Sbjct: 83832 tcctccgccacctcctgctgca 83853 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 262 tcctccgccacctcctgctgca 283 |||||||||||||||||||||| Sbjct: 50663 tcctccgccacctcctgctgca 50684 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 262 tcctccgccacctcctgctgca 283 |||||||||||||||||||||| Sbjct: 17512 tcctccgccacctcctgctgca 17533
>dbj|AP003808.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1115_C05 Length = 146585 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 262 tcctccgccacctcctgctgca 283 |||||||||||||||||||||| Sbjct: 128346 tcctccgccacctcctgctgca 128325
>dbj|AP003806.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1103_E04 Length = 111354 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 262 tcctccgccacctcctgctgca 283 |||||||||||||||||||||| Sbjct: 5001 tcctccgccacctcctgctgca 4980
>dbj|AP005643.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0046O12 Length = 128223 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 262 tcctccgccacctcctgctgca 283 |||||||||||||||||||||| Sbjct: 82467 tcctccgccacctcctgctgca 82446 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 262 tcctccgccacctcctgctgca 283 |||||||||||||||||||||| Sbjct: 82431 tcctccgccacctcctgctgca 82410
>dbj|AP004665.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0429B05 Length = 155024 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 262 tcctccgccacctcctgctgca 283 |||||||||||||||||||||| Sbjct: 8421 tcctccgccacctcctgctgca 8400
>dbj|AP004564.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0479C12 Length = 136799 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 262 tcctccgccacctcctgctgca 283 |||||||||||||||||||||| Sbjct: 96408 tcctccgccacctcctgctgca 96387
>dbj|AP005628.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1014_E02 Length = 159669 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 262 tcctccgccacctcctgctgca 283 |||||||||||||||||||||| Sbjct: 66962 tcctccgccacctcctgctgca 66983
>dbj|AP005464.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:B1027A11 Length = 169506 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 262 tcctccgccacctcctgctgca 283 |||||||||||||||||||||| Sbjct: 77081 tcctccgccacctcctgctgca 77060 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 262 tcctccgccacctcctgctgca 283 |||||||||||||||||||||| Sbjct: 77045 tcctccgccacctcctgctgca 77024
>dbj|AP005097.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:B1114E07 Length = 135511 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 262 tcctccgccacctcctgctgca 283 |||||||||||||||||||||| Sbjct: 106502 tcctccgccacctcctgctgca 106523
>gb|AE003560.3| Drosophila melanogaster chromosome 3L, section 25 of 83 of the complete sequence Length = 285494 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 57 tttcaaatgggaatggggaggc 78 |||||||||||||||||||||| Sbjct: 183149 tttcaaatgggaatggggaggc 183170
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 262 tcctccgccacctcctgctgca 283 |||||||||||||||||||||| Sbjct: 6655259 tcctccgccacctcctgctgca 6655280
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 262 tcctccgccacctcctgctgca 283 |||||||||||||||||||||| Sbjct: 5221751 tcctccgccacctcctgctgca 5221772 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 262 tcctccgccacctcctgctgca 283 |||||||||||||||||||||| Sbjct: 5221715 tcctccgccacctcctgctgca 5221736
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 262 tcctccgccacctcctgctgca 283 |||||||||||||||||||||| Sbjct: 4133650 tcctccgccacctcctgctgca 4133671
>emb|AL928748.4|CNS08CBL Oryza sativa chromosome 12, . BAC OSJNBb0092O07 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 123469 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 262 tcctccgccacctcctgctgca 283 |||||||||||||||||||||| Sbjct: 76059 tcctccgccacctcctgctgca 76080
>emb|AL606990.3|OSJN00122 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0066J23, complete sequence Length = 156934 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 262 tcctccgccacctcctgctgca 283 |||||||||||||||||||||| Sbjct: 41141 tcctccgccacctcctgctgca 41162
>emb|AL136374.4| Human DNA sequence from clone RP1-244G5 on chromosome 1q24.3-25.3, complete sequence Length = 119853 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 93 gaggatacaggagaaggtggca 114 |||||||||||||||||||||| Sbjct: 54567 gaggatacaggagaaggtggca 54546
>dbj|AP003018.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0004B13 Length = 142268 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 262 tcctccgccacctcctgctgca 283 |||||||||||||||||||||| Sbjct: 104524 tcctccgccacctcctgctgca 104545
>gb|AC136645.2| Rattus norvegicus 7 BAC CH230-156H17 (Children's Hospital Oakland Research Institute) complete sequence Length = 204000 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 189 ttcttgacacagtatcacagttcac 213 |||||||||||||| |||||||||| Sbjct: 161365 ttcttgacacagtaacacagttcac 161341
>gb|AC132292.3| Mus musculus BAC clone RP24-319L4 from chromosome 5, complete sequence Length = 160517 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 147 ttagaagcaagcatgcttccctcct 171 ||||||||| ||||||||||||||| Sbjct: 56383 ttagaagcatgcatgcttccctcct 56407
>gb|AC097372.3| Homo sapiens BAC clone RP11-6L6 from 4, complete sequence Length = 163823 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 256 gcagcttcctccgccacctcctgct 280 |||||||||||| |||||||||||| Sbjct: 3195 gcagcttcctccaccacctcctgct 3171
>gb|AC155173.3| Mus musculus BAC clone RP23-72O23 from chromosome 5, complete sequence Length = 245443 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 147 ttagaagcaagcatgcttccctcct 171 ||||||||| ||||||||||||||| Sbjct: 125962 ttagaagcatgcatgcttccctcct 125986
>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome Length = 4659019 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Minus Query: 288 gcagatcaggttgcgatccccgtacacgttgtc 320 ||||||||||||||| || ||||| |||||||| Sbjct: 254610 gcagatcaggttgcggtcgccgtagacgttgtc 254578
>ref|NM_128167.2| Arabidopsis thaliana glycine dehydrogenase (decarboxylating) AT2G26080 mRNA, complete cds Length = 3487 Score = 40.1 bits (20), Expect = 6.1 Identities = 35/40 (87%) Strand = Plus / Minus Query: 310 tacacgttgtccacacgacatgttgttggccagaacttgg 349 |||||||||||||| || | ||| || ||||||||||||| Sbjct: 3104 tacacgttgtccactcgccctgtagtgggccagaacttgg 3065
>ref|XM_464584.1| Oryza sativa (japonica cultivar-group), mRNA Length = 738 Score = 40.1 bits (20), Expect = 6.1 Identities = 29/32 (90%) Strand = Plus / Minus Query: 246 ggtcgcagctgcagcttcctccgccacctcct 277 ||||||||| || | ||||||||||||||||| Sbjct: 196 ggtcgcagccgctgtttcctccgccacctcct 165
>ref|XM_513692.1| PREDICTED: Pan troglodytes similar to D-3-phosphoglycerate dehydrogenase (3-PGDH) (LOC457168), mRNA Length = 3045 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 69 atggggaggcagcgtggggg 88 |||||||||||||||||||| Sbjct: 2555 atggggaggcagcgtggggg 2536
>gb|AC134415.8| Mus musculus chromosome 3, clone RP24-224P21, complete sequence Length = 167586 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 149 agaagcaagcatgcttccct 168 |||||||||||||||||||| Sbjct: 146573 agaagcaagcatgcttccct 146554
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome Length = 4403837 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 288 gcagatcaggttgcgatccccgta 311 ||||| |||||||||||||||||| Sbjct: 2075897 gcagaccaggttgcgatccccgta 2075874
>gb|AC102104.17| Mus musculus chromosome 15, clone RP23-85P16, complete sequence Length = 180310 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 425 tttggggtgggtgaggagcaccct 448 ||||||||||| |||||||||||| Sbjct: 86386 tttggggtgggagaggagcaccct 86409
>gb|AC125105.3| Mus musculus BAC clone RP24-220B7 from chromosome 16, complete sequence Length = 153616 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 429 gggtgggtgaggagcaccct 448 |||||||||||||||||||| Sbjct: 121430 gggtgggtgaggagcaccct 121449
>gb|AC159963.7| Mus musculus chromosome 15, clone RP23-338F23, complete sequence Length = 228337 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 425 tttggggtgggtgaggagcaccct 448 ||||||||||| |||||||||||| Sbjct: 217966 tttggggtgggagaggagcaccct 217943
>ref|XM_863528.1| PREDICTED: Canis familiaris similar to Membralin, transcript variant 2 (LOC476757), mRNA Length = 2766 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 382 tactccctggagtatggctt 401 |||||||||||||||||||| Sbjct: 761 tactccctggagtatggctt 780
>ref|XM_533963.2| PREDICTED: Canis familiaris similar to Membralin, transcript variant 1 (LOC476757), mRNA Length = 2670 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 382 tactccctggagtatggctt 401 |||||||||||||||||||| Sbjct: 761 tactccctggagtatggctt 780
>emb|AL589734.5| Human DNA sequence from clone RP4-683H9 on chromosome 1 Contains the 3' end of the PHGDH gene for phosphoglycerate dehydrogenase and the HMGCS2 gene for 3-hydroxy-3-methylglutaryl-Coenzyme A synthase 2 (mitochondrial), complete sequence Length = 65882 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 69 atggggaggcagcgtggggg 88 |||||||||||||||||||| Sbjct: 17240 atggggaggcagcgtggggg 17221
>emb|AL445467.6| Human DNA sequence from clone RP11-311M14 on chromosome X Contains the 5' end of the CTPS2 gene for CTP synthase II, the CALB3 gene for calbindin 3 (vitamin D-dependent calcium binding protein), the SYAP1 gene for synapse associated protein 1 SAP47 homolog (Drosophila) and two CpG islands, complete sequence Length = 166336 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 279 ctgcagagtgcagatcaggt 298 |||||||||||||||||||| Sbjct: 48377 ctgcagagtgcagatcaggt 48396
>emb|AL161781.12| Human DNA sequence from clone RP11-297B17 on chromosome 9 Contains the 5' end of the PAX5 gene for paired box gene 5 (B-cell lineage specific activator protein) (BSAP), a ribosomal protein L32 (RPL32) pseudogene and five CpG islands, complete sequence Length = 159096 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 101 aggagaaggtggcatctgag 120 |||||||||||||||||||| Sbjct: 77172 aggagaaggtggcatctgag 77191
>emb|BX842577.1| Mycobacterium tuberculosis H37Rv complete genome; segment 6/13 Length = 347496 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 288 gcagatcaggttgcgatccccgta 311 ||||| |||||||||||||||||| Sbjct: 347415 gcagaccaggttgcgatccccgta 347392
>emb|BX248340.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 7/14 Length = 291050 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 288 gcagatcaggttgcgatccccgta 311 ||||| |||||||||||||||||| Sbjct: 155024 gcagaccaggttgcgatccccgta 155001
>gb|AY118396.1| Drosophila melanogaster RE56844 full insert cDNA Length = 3802 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 250 gcagctgcagcttcctccgc 269 |||||||||||||||||||| Sbjct: 2058 gcagctgcagcttcctccgc 2039
>ref|NM_135676.2| Drosophila melanogaster Phosphodiesterase 1c CG14940-RA (Pde1c), mRNA Length = 3892 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 250 gcagctgcagcttcctccgc 269 |||||||||||||||||||| Sbjct: 2059 gcagctgcagcttcctccgc 2040
>gb|AY084186.1| Drosophila melanogaster RE69157 full insert cDNA Length = 3876 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 250 gcagctgcagcttcctccgc 269 |||||||||||||||||||| Sbjct: 3187 gcagctgcagcttcctccgc 3168
>gb|AC093199.1| Drosophila melanogaster, chromosome 2L, region 33A-33A, BAC clone BACR05B13, complete sequence Length = 168641 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 250 gcagctgcagcttcctccgc 269 |||||||||||||||||||| Sbjct: 62112 gcagctgcagcttcctccgc 62093
>gb|AC000089.1| Homo sapiens Chromosome 22q11.2 Cosmid Clone 89h In DGCR Region, complete sequence Length = 39754 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 261 ttcctccgccacctcctgct 280 |||||||||||||||||||| Sbjct: 35718 ttcctccgccacctcctgct 35737
>gb|AC000076.2| Homo sapiens Chromosome 22q11.2 Cosmid Clone 2h In DGCR Region, complete sequence Length = 41091 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 261 ttcctccgccacctcctgct 280 |||||||||||||||||||| Sbjct: 5212 ttcctccgccacctcctgct 5231
>gb|AE004934.1| Pseudomonas aeruginosa PAO1, section 495 of 529 of the complete genome Length = 12908 Score = 40.1 bits (20), Expect = 6.1 Identities = 32/36 (88%) Strand = Plus / Plus Query: 288 gcagatcaggttgcgatccccgtacacgttgtccac 323 ||||| ||||||||| || ||||| ||||||||||| Sbjct: 4477 gcagaacaggttgcggtcgccgtagacgttgtccac 4512
>ref|XM_221487.3| PREDICTED: Rattus norvegicus similar to Ubiquitin ligase protein DZIP3 (DAZ-interacting protein 3 homolog) (LOC303963), mRNA Length = 3876 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 257 cagcttcctccgccacctcc 276 |||||||||||||||||||| Sbjct: 3115 cagcttcctccgccacctcc 3134
>dbj|AP003977.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1006_A02 Length = 175153 Score = 40.1 bits (20), Expect = 6.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 246 ggtcgcagctgcagcttcctccgccacctcct 277 ||||||||| || | ||||||||||||||||| Sbjct: 109645 ggtcgcagccgctgtttcctccgccacctcct 109676
>gb|AC153978.5| Mus musculus 10 BAC RP24-217I1 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 172497 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 429 gggtgggtgaggagcaccct 448 |||||||||||||||||||| Sbjct: 153760 gggtgggtgaggagcaccct 153779
>gb|AE003633.3| Drosophila melanogaster chromosome 2L, section 42 of 83 of the complete sequence Length = 266175 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 250 gcagctgcagcttcctccgc 269 |||||||||||||||||||| Sbjct: 258432 gcagctgcagcttcctccgc 258451
>gb|AC006240.1|AC006240 Drosophila melanogaster, chromosome 2L, region 33A3-33B2, P1 clones DS06189, DS04362, and DS07071, complete sequence Length = 170056 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 250 gcagctgcagcttcctccgc 269 |||||||||||||||||||| Sbjct: 147461 gcagctgcagcttcctccgc 147442
>emb|Z77666.1|CEK08E7 Caenorhabditis elegans Cosmid K08E7, complete sequence Length = 38464 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 176 gaagcatcataacttcttga 195 |||||||||||||||||||| Sbjct: 29884 gaagcatcataacttcttga 29903
>gb|AC125066.5| Mus musculus BAC clone RP23-430N17 from 16, complete sequence Length = 197813 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 429 gggtgggtgaggagcaccct 448 |||||||||||||||||||| Sbjct: 193016 gggtgggtgaggagcaccct 192997
>gb|AC103937.16| Mus musculus chromosome 3, clone RP23-229C5, complete sequence Length = 179805 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 149 agaagcaagcatgcttccct 168 |||||||||||||||||||| Sbjct: 31467 agaagcaagcatgcttccct 31448
>gb|L13042.1|HUMCALD9K Homo sapiens calbindin D-9k gene, 5' end cds Length = 6324 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 279 ctgcagagtgcagatcaggt 298 |||||||||||||||||||| Sbjct: 1551 ctgcagagtgcagatcaggt 1570 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,166,002 Number of Sequences: 3902068 Number of extensions: 4166002 Number of successful extensions: 81197 Number of sequences better than 10.0: 124 Number of HSP's better than 10.0 without gapping: 132 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 80293 Number of HSP's gapped (non-prelim): 902 length of query: 450 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 428 effective length of database: 17,147,199,772 effective search space: 7339001502416 effective search space used: 7339001502416 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
