ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbah61m13
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK059404.1| Oryza sativa (japonica cultivar-group) cDNA clon... 137 4e-29
2ref|XM_473782.1| Oryza sativa (japonica cultivar-group), predic... 135 1e-28
3dbj|AK100301.1| Oryza sativa (japonica cultivar-group) cDNA clon... 135 1e-28
4dbj|AK072200.1| Oryza sativa (japonica cultivar-group) cDNA clon... 135 1e-28
5emb|AL606638.2|OSJN00077 Oryza sativa genomic DNA, chromosome 4,... 100 8e-18
6dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 100 8e-18
7dbj|AK073515.1| Oryza sativa (japonica cultivar-group) cDNA clon... 100 8e-18
8ref|XM_480915.1| Oryza sativa (japonica cultivar-group), mRNA 62 2e-06
9dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 62 2e-06
10dbj|AP005249.3| Oryza sativa (japonica cultivar-group) genomic D... 62 2e-06
11dbj|AP004657.2| Oryza sativa (japonica cultivar-group) genomic D... 62 2e-06
12dbj|AK120070.1| Oryza sativa (japonica cultivar-group) cDNA clon... 54 4e-04
13emb|BX927371.12| Zebrafish DNA sequence from clone DKEY-1C17 in ... 46 0.10
14emb|AL928637.7| Zebrafish DNA sequence from clone CH211-227I6, c... 46 0.10
15emb|AL807742.7| Human DNA sequence from clone RP11-274G22 on chr... 44 0.40
16gb|AC074191.3| Homo sapiens chromosome 11 clone RP11-502G22, com... 44 0.40
17emb|BX119977.10| Zebrafish DNA sequence from clone CH211-198A3 i... 44 0.40
18emb|AL662893.12| Mouse DNA sequence from clone RP23-202G21 on ch... 44 0.40
19emb|AL161447.20| Human DNA sequence from clone RP11-379P1 on chr... 42 1.6
20emb|AL157364.15| Human DNA sequence from clone RP11-31H2 on chro... 42 1.6
21gb|AC129805.7| Homo sapiens 12 BAC RP11-125N22 (Roswell Park Can... 42 1.6
22gb|AE010300.1| Leptospira interrogans serovar lai str. 56601 chr... 42 1.6
23dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
24gb|AC117373.10| Homo sapiens 12 BAC RP11-174M13 (Roswell Park Ca... 42 1.6
25gb|AC022336.12| Homo sapiens 3 BAC RP11-71H17 (Roswell Park Canc... 42 1.6
26dbj|AP005412.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
27dbj|AB112588.1| Satsuma dwarf virus CP gene for coat proteins, p... 42 1.6
28gb|AE016823.1| Leptospira interrogans serovar Copenhageni str. F... 42 1.6
29gb|AY958086.1| Zygnema circumcarinatum chloroplast, complete genome 40 6.3
30gb|AC102414.8| Mus musculus chromosome 15, clone RP24-474D5, com... 40 6.3
31gb|AC131191.4| Mus musculus BAC clone RP24-464B16 from chromosom... 40 6.3
32gb|AC130714.3| Mus musculus BAC clone RP23-367L18 from chromosom... 40 6.3
33gb|AY299397.1| Pisum sativum clone Ps-cos14 Ogre retrotransposon... 40 6.3
34emb|AL357912.10| Human DNA sequence from clone RP11-328N1 on chr... 40 6.3
35emb|AL021069.1|HS970D1 Human DNA sequence from clone RP5-970D1 o... 40 6.3
36emb|BX537139.17| Zebrafish DNA sequence from clone DKEY-46K9 in ... 40 6.3
37emb|Y11066.1|DMKLUGEN D.melanogaster mRNA for klumpfuss gene 40 6.3
38gb|AF214671.8| Homo sapiens chromosome 8 clone GS1-42F21 map 8qt... 40 6.3
39emb|CR626927.1| Bacteroides fragilis NCTC 9343, complete genome 40 6.3
40emb|BX571871.1| Photorhabdus luminescens subsp. laumondii TTO1 c... 40 6.3
41gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome 40 6.3
42gb|AC090459.6| Homo sapiens chromosome 18, clone RP11-125E6, com... 40 6.3
43gb|AC099845.2| Homo sapiens chromosome 18, clone RP11-812D21, co... 40 6.3
44gb|AC007268.5| Arabidopsis thaliana chromosome 2 clone T27D6 map... 40 6.3
45gb|AC105218.4| Homo sapiens chromosome 8, clone RP11-410F13, com... 40 6.3
46gb|AC097535.3| Homo sapiens BAC clone RP11-802H3 from 4, complet... 40 6.3
47gb|AC021500.6| Homo sapiens chromosome 8, clone RP11-135K1, comp... 40 6.3
48dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.3
49gb|AC103777.14| Homo sapiens chromosome 8, clone RP11-460G23, co... 40 6.3
50gb|AC087544.2|AC087544 Oryza sativa (japonica cultivar-group) ch... 40 6.3
51gb|AC007251.4| Homo sapiens BAC clone RP11-373G23 from 2, comple... 40 6.3
52gb|AC027653.3| Mus musculus strain C57BL6/J chromosome 5 clone R... 40 6.3
53gb|AC090644.2| Homo sapiens chromosome 3 clone RP11-322M13 map 3... 40 6.3
54gb|AC027689.10|AC027689 Homo sapiens chromosome 18 clone RP11-24... 40 6.3
55dbj|AP006841.1| Bacteroides fragilis YCH46 DNA, complete genome 40 6.3
56emb|CR848035.7| Zebrafish DNA sequence from clone CH211-203J1 in... 40 6.3
57gb|AY104424.1| Zea mays PCO061312 mRNA sequence 40 6.3
58emb|AL357153.4|CNS05TDV Human chromosome 14 DNA sequence BAC C-2... 40 6.3
59dbj|AP001972.4| Homo sapiens genomic DNA, chromosome 11q, clone:... 40 6.3
60gb|AC064793.3| Mus musculus strain C57BL6/J chromosome 5 clone R... 40 6.3
61dbj|AP005713.2| Homo sapiens genomic DNA, chromosome 8q24, clone... 40 6.3
62gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 40 6.3
63emb|AL929277.9| Mouse DNA sequence from clone RP23-153J22 on chr... 40 6.3
64gb|U41104.2| Caenorhabditis elegans cosmid T12C9, complete sequence 40 6.3
65gb|AC158142.19| Mus musculus chromosome 15, clone RP24-342H15, c... 40 6.3
66dbj|AP001578.3| Homo sapiens genomic DNA, chromosome 6q25.2, clo... 40 6.3
67dbj|AP005120.2| Homo sapiens genomic DNA, chromosome 18p clone:R... 40 6.3 
>dbj|AK059404.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-027-B09, full
           insert sequence
          Length = 694

 Score =  137 bits (69), Expect = 4e-29
 Identities = 123/141 (87%)
 Strand = Plus / Minus

                                                                       
Query: 201 ggcgacggatttgcagatggggcaccagttcttctgccggagccagtgctgtatgcaggt 260
           |||||||||||| || ||||| ||||||||||||||||||||||||| || |||||||| 
Sbjct: 575 ggcgacggatttacaaatgggacaccagttcttctgccggagccagttctttatgcagga 516

                                                                       
Query: 261 gatgtggtagtagtgcttacacgccatgttccccacctcctcaccaccagagtactcctc 320
           || ||||||||| || || ||  |||| || ||||||||||||||| | || || |||||
Sbjct: 515 gaagtggtagtaatgtttgcagaccatcttgcccacctcctcaccatctgaatattcctc 456

                                
Query: 321 ctggcatatgctgcattttct 341
           |||||||||||||||||||||
Sbjct: 455 ctggcatatgctgcattttct 435
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>ref|XM_473782.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1104

 Score =  135 bits (68), Expect = 1e-28
 Identities = 122/140 (87%)
 Strand = Plus / Minus

                                                                        
Query: 202  gcgacggatttgcagatggggcaccagttcttctgccggagccagtgctgtatgcaggtg 261
            ||||||||||| || ||||| ||||||||||||||||||||||||| || |||||||| |
Sbjct: 1088 gcgacggatttacaaatgggacaccagttcttctgccggagccagttctttatgcaggag 1029

                                                                        
Query: 262  atgtggtagtagtgcttacacgccatgttccccacctcctcaccaccagagtactcctcc 321
            | ||||||||| || || ||  |||| || ||||||||||||||| | || || ||||||
Sbjct: 1028 aagtggtagtaatgtttgcagaccatcttgcccacctcctcaccatctgaatattcctcc 969

                                
Query: 322  tggcatatgctgcattttct 341
            ||||||||||||||||||||
Sbjct: 968  tggcatatgctgcattttct 949
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>dbj|AK100301.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023077P18, full
            insert sequence
          Length = 1493

 Score =  135 bits (68), Expect = 1e-28
 Identities = 122/140 (87%)
 Strand = Plus / Minus

                                                                        
Query: 202  gcgacggatttgcagatggggcaccagttcttctgccggagccagtgctgtatgcaggtg 261
            ||||||||||| || ||||| ||||||||||||||||||||||||| || |||||||| |
Sbjct: 1243 gcgacggatttacaaatgggacaccagttcttctgccggagccagttctttatgcaggag 1184

                                                                        
Query: 262  atgtggtagtagtgcttacacgccatgttccccacctcctcaccaccagagtactcctcc 321
            | ||||||||| || || ||  |||| || ||||||||||||||| | || || ||||||
Sbjct: 1183 aagtggtagtaatgtttgcagaccatcttgcccacctcctcaccatctgaatattcctcc 1124

                                
Query: 322  tggcatatgctgcattttct 341
            ||||||||||||||||||||
Sbjct: 1123 tggcatatgctgcattttct 1104
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>dbj|AK072200.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013160D07, full
            insert sequence
          Length = 1363

 Score =  135 bits (68), Expect = 1e-28
 Identities = 122/140 (87%)
 Strand = Plus / Minus

                                                                        
Query: 202  gcgacggatttgcagatggggcaccagttcttctgccggagccagtgctgtatgcaggtg 261
            ||||||||||| || ||||| ||||||||||||||||||||||||| || |||||||| |
Sbjct: 1243 gcgacggatttacaaatgggacaccagttcttctgccggagccagttctttatgcaggag 1184

                                                                        
Query: 262  atgtggtagtagtgcttacacgccatgttccccacctcctcaccaccagagtactcctcc 321
            | ||||||||| || || ||  |||| || ||||||||||||||| | || || ||||||
Sbjct: 1183 aagtggtagtaatgtttgcagaccatcttgcccacctcctcaccatctgaatattcctcc 1124

                                
Query: 322  tggcatatgctgcattttct 341
            ||||||||||||||||||||
Sbjct: 1123 tggcatatgctgcattttct 1104
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>emb|AL606638.2|OSJN00077 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0041A02,
              complete sequence
          Length = 166804

 Score = 99.6 bits (50), Expect = 8e-18
 Identities = 104/122 (85%)
 Strand = Plus / Plus

                                                                          
Query: 202    gcgacggatttgcagatggggcaccagttcttctgccggagccagtgctgtatgcaggtg 261
              ||||||||||| || ||||| ||||||||||||||||||||||||| || |||||||| |
Sbjct: 107109 gcgacggatttacaaatgggacaccagttcttctgccggagccagttctttatgcaggag 107168

                                                                          
Query: 262    atgtggtagtagtgcttacacgccatgttccccacctcctcaccaccagagtactcctcc 321
              | ||||||||| || || ||  |||| || ||||||||||||||| | || || ||||||
Sbjct: 107169 aagtggtagtaatgtttgcagaccatcttgcccacctcctcaccatctgaatattcctcc 107228

                
Query: 322    tg 323
              ||
Sbjct: 107229 tg 107230



 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 320    cctggcatatgctgcattttct 341
              ||||||||||||||||||||||
Sbjct: 107325 cctggcatatgctgcattttct 107346
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 99.6 bits (50), Expect = 8e-18
 Identities = 104/122 (85%)
 Strand = Plus / Plus

                                                                            
Query: 202      gcgacggatttgcagatggggcaccagttcttctgccggagccagtgctgtatgcaggtg 261
                ||||||||||| || ||||| ||||||||||||||||||||||||| || |||||||| |
Sbjct: 30473732 gcgacggatttacaaatgggacaccagttcttctgccggagccagttctttatgcaggag 30473791

                                                                            
Query: 262      atgtggtagtagtgcttacacgccatgttccccacctcctcaccaccagagtactcctcc 321
                | ||||||||| || || ||  |||| || ||||||||||||||| | || || ||||||
Sbjct: 30473792 aagtggtagtaatgtttgcagaccatcttgcccacctcctcaccatctgaatattcctcc 30473851

                  
Query: 322      tg 323
                ||
Sbjct: 30473852 tg 30473853



 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                      
Query: 320      cctggcatatgctgcattttct 341
                ||||||||||||||||||||||
Sbjct: 30473948 cctggcatatgctgcattttct 30473969
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>dbj|AK073515.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033040F16, full
           insert sequence
          Length = 2340

 Score = 99.6 bits (50), Expect = 8e-18
 Identities = 104/122 (85%)
 Strand = Plus / Plus

                                                                       
Query: 202 gcgacggatttgcagatggggcaccagttcttctgccggagccagtgctgtatgcaggtg 261
           ||||||||||| || ||||| ||||||||||||||||||||||||| || |||||||| |
Sbjct: 593 gcgacggatttacaaatgggacaccagttcttctgccggagccagttctttatgcaggag 652

                                                                       
Query: 262 atgtggtagtagtgcttacacgccatgttccccacctcctcaccaccagagtactcctcc 321
           | ||||||||| || || ||  |||| || ||||||||||||||| | || || ||||||
Sbjct: 653 aagtggtagtaatgtttgcagaccatcttgcccacctcctcaccatctgaatattcctcc 712

             
Query: 322 tg 323
           ||
Sbjct: 713 tg 714



 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 320 cctggcatatgctgcattttct 341
           ||||||||||||||||||||||
Sbjct: 809 cctggcatatgctgcattttct 830
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>ref|XM_480915.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1050

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 40/43 (93%)
 Strand = Plus / Minus

                                                       
Query: 203  cgacggatttgcagatggggcaccagttcttctgccggagcca 245
            ||||||||||||||||||||||||| ||||| ||||| |||||
Sbjct: 1030 cgacggatttgcagatggggcaccaattcttttgccgaagcca 988
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 40/43 (93%)
 Strand = Plus / Minus

                                                          
Query: 203     cgacggatttgcagatggggcaccagttcttctgccggagcca 245
               ||||||||||||||||||||||||| ||||| ||||| |||||
Sbjct: 8577507 cgacggatttgcagatggggcaccaattcttttgccgaagcca 8577465
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>dbj|AP005249.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OSJNBa0087F21
          Length = 187401

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 40/43 (93%)
 Strand = Plus / Minus

                                                        
Query: 203   cgacggatttgcagatggggcaccagttcttctgccggagcca 245
             ||||||||||||||||||||||||| ||||| ||||| |||||
Sbjct: 89418 cgacggatttgcagatggggcaccaattcttttgccgaagcca 89376
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>dbj|AP004657.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0031C02
          Length = 138843

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 40/43 (93%)
 Strand = Plus / Minus

                                                         
Query: 203    cgacggatttgcagatggggcaccagttcttctgccggagcca 245
              ||||||||||||||||||||||||| ||||| ||||| |||||
Sbjct: 107050 cgacggatttgcagatggggcaccaattcttttgccgaagcca 107008
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>dbj|AK120070.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013003N07, full
            insert sequence
          Length = 2128

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 27/27 (100%)
 Strand = Plus / Minus

                                       
Query: 312  gtactcctcctggcatatgctgcattt 338
            |||||||||||||||||||||||||||
Sbjct: 1869 gtactcctcctggcatatgctgcattt 1843



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 42/49 (85%)
 Strand = Plus / Minus

                                                             
Query: 210  tttgcagatggggcaccagttcttctgccggagccagtgctgtatgcag 258
            |||||| || || |||||||||||||||| |||||| || || ||||||
Sbjct: 1971 tttgcatattggacaccagttcttctgcctgagccactggtgaatgcag 1923
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>emb|BX927371.12| Zebrafish DNA sequence from clone DKEY-1C17 in linkage group 7,
             complete sequence
          Length = 154034

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 93    agaaaagaatagaaaaaagaata 115
             |||||||||||||||||||||||
Sbjct: 76921 agaaaagaatagaaaaaagaata 76943
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>emb|AL928637.7| Zebrafish DNA sequence from clone CH211-227I6, complete sequence
          Length = 163121

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 93    agaaaagaatagaaaaaagaata 115
             |||||||||||||||||||||||
Sbjct: 91869 agaaaagaatagaaaaaagaata 91891
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>emb|AL807742.7| Human DNA sequence from clone RP11-274G22 on chromosome X, complete
             sequence
          Length = 172919

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 93    agaaaagaatagaaaaaagaat 114
             ||||||||||||||||||||||
Sbjct: 23788 agaaaagaatagaaaaaagaat 23809
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>gb|AC074191.3| Homo sapiens chromosome 11 clone RP11-502G22, complete sequence
          Length = 179357

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 319   tcctggcatatgctgcattttc 340
             ||||||||||||||||||||||
Sbjct: 75165 tcctggcatatgctgcattttc 75186
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>emb|BX119977.10| Zebrafish DNA sequence from clone CH211-198A3 in linkage group 7,
             complete sequence
          Length = 182186

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 247   tgctgtatgcaggtgatgtggt 268
             ||||||||||||||||||||||
Sbjct: 72837 tgctgtatgcaggtgatgtggt 72816
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>emb|AL662893.12| Mouse DNA sequence from clone RP23-202G21 on chromosome 11, complete
             sequence
          Length = 205405

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 119   atcttgtgtctagacatttcag 140
             ||||||||||||||||||||||
Sbjct: 98271 atcttgtgtctagacatttcag 98250
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>emb|AL161447.20| Human DNA sequence from clone RP11-379P1 on chromosome 9 Contains the 3'
              end of a novel gene (FLJ21613) similar to rat corneal wound
              healing related protein (includes FLJ22634), the GOLPH2
              gene for golgi phosphoprotein 2 (GP73), a novel pseudogene
              and a CpG island, complete sequence
          Length = 160115

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 93     agaaaagaatagaaaaaagaataca 117
              ||||||||| |||||||||||||||
Sbjct: 116331 agaaaagaaaagaaaaaagaataca 116355
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>emb|AL157364.15| Human DNA sequence from clone RP11-31H2 on chromosome 13 Contians the
            ATP12A gene for ATPase, H+/K+ transporting, nongastric,
            alpha polypeptide, a ribosomal protein L26 (RPL26)
            pseudogene and a CpG island, complete sequence
          Length = 91231

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 159  aacaagcagaggctgctggtg 179
            |||||||||||||||||||||
Sbjct: 2273 aacaagcagaggctgctggtg 2253
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>gb|AC129805.7| Homo sapiens 12 BAC RP11-125N22 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 165378

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 93     agaaaagaatagaaaaaagaataca 117
              ||||||||| |||||||||||||||
Sbjct: 108446 agaaaagaaaagaaaaaagaataca 108422
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>gb|AE010300.1| Leptospira interrogans serovar lai str. 56601 chromosome I, complete
               sequence
          Length = 4332241

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                            
Query: 86      tcgttctagaaaagaatagaaaaaagaat 114
               |||||||||||||||| || |||||||||
Sbjct: 1390052 tcgttctagaaaagaagaggaaaaagaat 1390024
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 42/49 (85%)
 Strand = Plus / Minus

                                                                
Query: 210     tttgcagatggggcaccagttcttctgccggagccagtgctgtatgcag 258
               |||||| || || |||||||||||||||| |||||| || || ||||||
Sbjct: 2795248 tttgcatattggacaccagttcttctgcctgagccactggtgaatgcag 2795200
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>gb|AC117373.10| Homo sapiens 12 BAC RP11-174M13 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 175768

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 93    agaaaagaatagaaaaaagaa 113
             |||||||||||||||||||||
Sbjct: 41632 agaaaagaatagaaaaaagaa 41652
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>gb|AC022336.12| Homo sapiens 3 BAC RP11-71H17 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 166071

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 93     agaaaagaatagaaaaaagaataca 117
              ||||||||| |||||||||||||||
Sbjct: 164936 agaaaagaaaagaaaaaagaataca 164960
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>dbj|AP005412.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBa0050G13
          Length = 150685

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 42/49 (85%)
 Strand = Plus / Minus

                                                              
Query: 210   tttgcagatggggcaccagttcttctgccggagccagtgctgtatgcag 258
             |||||| || || |||||||||||||||| |||||| || || ||||||
Sbjct: 63476 tttgcatattggacaccagttcttctgcctgagccactggtgaatgcag 63428
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>dbj|AB112588.1| Satsuma dwarf virus CP gene for coat proteins, partial cds
          Length = 2160

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                               
Query: 65 ttgaaggcacaaacaaatgtt 85
          |||||||||||||||||||||
Sbjct: 61 ttgaaggcacaaacaaatgtt 41
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>gb|AE016823.1| Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130, chromosome
               I, complete sequence
          Length = 4277185

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                            
Query: 86      tcgttctagaaaagaatagaaaaaagaat 114
               |||||||||||||||| || |||||||||
Sbjct: 2837406 tcgttctagaaaagaagaggaaaaagaat 2837434
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>gb|AY958086.1| Zygnema circumcarinatum chloroplast, complete genome
          Length = 165372

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 90     tctagaaaagaatagaaaaa 109
              ||||||||||||||||||||
Sbjct: 154341 tctagaaaagaatagaaaaa 154360
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>gb|AC102414.8| Mus musculus chromosome 15, clone RP24-474D5, complete sequence
          Length = 159739

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 290    tccccacctcctcaccacca 309
              ||||||||||||||||||||
Sbjct: 130242 tccccacctcctcaccacca 130261
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>gb|AC131191.4| Mus musculus BAC clone RP24-464B16 from chromosome 18, complete
             sequence
          Length = 136832

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 60    aagtcttgaaggcacaaacaaatg 83
             ||||| ||||||||||||||||||
Sbjct: 64966 aagtcctgaaggcacaaacaaatg 64943
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>gb|AC130714.3| Mus musculus BAC clone RP23-367L18 from chromosome 18, complete sequence
          Length = 193184

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 60     aagtcttgaaggcacaaacaaatg 83
              ||||| ||||||||||||||||||
Sbjct: 170438 aagtcctgaaggcacaaacaaatg 170415
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>gb|AY299397.1| Pisum sativum clone Ps-cos14 Ogre retrotransposon, partial sequence
          Length = 32724

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 93   agaaaagaatagaaaaaaga 112
            ||||||||||||||||||||
Sbjct: 1422 agaaaagaatagaaaaaaga 1441
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>emb|AL357912.10| Human DNA sequence from clone RP11-328N1 on chromosome 1 Contains the
            3' end of a novel gene and the 5' end of the DNAH14 gene
            for dynein (axonemal) heavy polypeptide 14, complete
            sequence
          Length = 130057

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 93   agaaaagaatagaaaaaagaatacagat 120
            ||||||||| ||||||||||| ||||||
Sbjct: 2188 agaaaagaaaagaaaaaagaaaacagat 2215
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>emb|AL021069.1|HS970D1 Human DNA sequence from clone RP5-970D1 on chromosome 1q24 Contains the
             3' end of a variant of the gene for expressed in
             hematopoietic cells (heart, liver) (HLL), complete
             sequence
          Length = 100496

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 90    tctagaaaagaatagaaaaaagaa 113
             |||||||||||| |||||||||||
Sbjct: 78127 tctagaaaagaaaagaaaaaagaa 78104
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>emb|BX537139.17| Zebrafish DNA sequence from clone DKEY-46K9 in linkage group 9,
             complete sequence
          Length = 243063

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 93    agaaaagaatagaaaaaaga 112
             ||||||||||||||||||||
Sbjct: 76238 agaaaagaatagaaaaaaga 76219
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>emb|Y11066.1|DMKLUGEN D.melanogaster mRNA for klumpfuss gene
          Length = 3866

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 94   gaaaagaatagaaaaaagaa 113
            ||||||||||||||||||||
Sbjct: 3217 gaaaagaatagaaaaaagaa 3236
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>gb|AF214671.8| Homo sapiens chromosome 8 clone GS1-42F21 map 8qtel, complete sequence
          Length = 78545

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 131   gacatttcaggagaatctgt 150
             ||||||||||||||||||||
Sbjct: 26683 gacatttcaggagaatctgt 26702
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>emb|CR626927.1| Bacteroides fragilis NCTC 9343, complete genome
          Length = 5205140

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 93      agaaaagaatagaaaaaaga 112
               ||||||||||||||||||||
Sbjct: 1593461 agaaaagaatagaaaaaaga 1593442
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>emb|BX571871.1| Photorhabdus luminescens subsp. laumondii TTO1 complete genome; segment
             13/17
          Length = 349944

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 94    gaaaagaatagaaaaaagaataca 117
             ||||||||||||||||| ||||||
Sbjct: 94321 gaaaagaatagaaaaaacaataca 94344
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>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome
          Length = 7074893

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 358     gtctctggggctgtgggcgt 377
               ||||||||||||||||||||
Sbjct: 6259245 gtctctggggctgtgggcgt 6259226
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>gb|AC090459.6| Homo sapiens chromosome 18, clone RP11-125E6, complete sequence
          Length = 146310

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 96     aaagaatagaaaaaagaata 115
              ||||||||||||||||||||
Sbjct: 143765 aaagaatagaaaaaagaata 143784
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>gb|AC099845.2| Homo sapiens chromosome 18, clone RP11-812D21, complete sequence
          Length = 189559

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 96     aaagaatagaaaaaagaata 115
              ||||||||||||||||||||
Sbjct: 117185 aaagaatagaaaaaagaata 117166
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>gb|AC007268.5| Arabidopsis thaliana chromosome 2 clone T27D6 map PR1, complete
             sequence
          Length = 89685

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 105   aaaaaagaatacagatcttg 124
             ||||||||||||||||||||
Sbjct: 41220 aaaaaagaatacagatcttg 41239
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>gb|AC105218.4| Homo sapiens chromosome 8, clone RP11-410F13, complete sequence
          Length = 138416

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 290  tccccacctcctcaccacca 309
            ||||||||||||||||||||
Sbjct: 4265 tccccacctcctcaccacca 4246
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>gb|AC097535.3| Homo sapiens BAC clone RP11-802H3 from 4, complete sequence
          Length = 72759

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 290   tccccacctcctcaccacca 309
             ||||||||||||||||||||
Sbjct: 20301 tccccacctcctcaccacca 20282
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>gb|AC021500.6| Homo sapiens chromosome 8, clone RP11-135K1, complete sequence
          Length = 160348

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 290   tccccacctcctcaccacca 309
             ||||||||||||||||||||
Sbjct: 62816 tccccacctcctcaccacca 62835
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 97       aagaatagaaaaaagaatac 116
                ||||||||||||||||||||
Sbjct: 15376235 aagaatagaaaaaagaatac 15376254
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>gb|AC103777.14| Homo sapiens chromosome 8, clone RP11-460G23, complete sequence
          Length = 164588

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 131   gacatttcaggagaatctgt 150
             ||||||||||||||||||||
Sbjct: 86169 gacatttcaggagaatctgt 86150
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>gb|AC087544.2|AC087544 Oryza sativa (japonica cultivar-group) chromosome 10 clone nbxb0046P18,
             complete sequence
          Length = 144720

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 97    aagaatagaaaaaagaatac 116
             ||||||||||||||||||||
Sbjct: 93598 aagaatagaaaaaagaatac 93617
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>gb|AC007251.4| Homo sapiens BAC clone RP11-373G23 from 2, complete sequence
          Length = 180964

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 97     aagaatagaaaaaagaatacagat 120
              ||||||||||||| ||||||||||
Sbjct: 177591 aagaatagaaaaatgaatacagat 177614
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>gb|AC027653.3| Mus musculus strain C57BL6/J chromosome 5 clone RP23-166J14, complete
             sequence
          Length = 174990

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 286   atgttccccacctcctcacc 305
             ||||||||||||||||||||
Sbjct: 16261 atgttccccacctcctcacc 16242
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>gb|AC090644.2| Homo sapiens chromosome 3 clone RP11-322M13 map 3p, complete sequence
          Length = 201414

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 149   gtttacactaaacaagcaga 168
             ||||||||||||||||||||
Sbjct: 36047 gtttacactaaacaagcaga 36028
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>gb|AC027689.10|AC027689 Homo sapiens chromosome 18 clone RP11-245A17, complete sequence
          Length = 180573

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 93     agaaaagaatagaaaaaaga 112
              ||||||||||||||||||||
Sbjct: 154912 agaaaagaatagaaaaaaga 154893
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>dbj|AP006841.1| Bacteroides fragilis YCH46 DNA, complete genome
          Length = 5277274

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 93      agaaaagaatagaaaaaaga 112
               ||||||||||||||||||||
Sbjct: 1632148 agaaaagaatagaaaaaaga 1632129
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>emb|CR848035.7| Zebrafish DNA sequence from clone CH211-203J1 in linkage group 12,
             complete sequence
          Length = 143674

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 52    aagacaagaagtcttgaaggcaca 75
             ||||||||||||||| ||||||||
Sbjct: 77302 aagacaagaagtcttaaaggcaca 77279
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>gb|AY104424.1| Zea mays PCO061312 mRNA sequence
          Length = 1386

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 211  ttgcagatggggcaccagttcttc 234
            ||||||||||||||| ||||||||
Sbjct: 1368 ttgcagatggggcacaagttcttc 1345
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>emb|AL357153.4|CNS05TDV Human chromosome 14 DNA sequence BAC C-2540L5 of library CalTech-D from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 209483

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 95     aaaagaatagaaaaaagaat 114
              ||||||||||||||||||||
Sbjct: 175547 aaaagaatagaaaaaagaat 175566
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>dbj|AP001972.4| Homo sapiens genomic DNA, chromosome 11q, clone:CTD-2562J17, complete
              sequences
          Length = 215225

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 290    tccccacctcctcaccacca 309
              ||||||||||||||||||||
Sbjct: 128395 tccccacctcctcaccacca 128414
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>gb|AC064793.3| Mus musculus strain C57BL6/J chromosome 5 clone RP23-369O21, complete
              sequence
          Length = 196933

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 286    atgttccccacctcctcacc 305
              ||||||||||||||||||||
Sbjct: 138382 atgttccccacctcctcacc 138363
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>dbj|AP005713.2| Homo sapiens genomic DNA, chromosome 8q24, clone: KB262G12, complete
              sequence
          Length = 126698

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 131    gacatttcaggagaatctgt 150
              ||||||||||||||||||||
Sbjct: 106443 gacatttcaggagaatctgt 106424
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 97       aagaatagaaaaaagaatac 116
                ||||||||||||||||||||
Sbjct: 15384476 aagaatagaaaaaagaatac 15384495
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>emb|AL929277.9| Mouse DNA sequence from clone RP23-153J22 on chromosome 4, complete
              sequence
          Length = 144310

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 67     gaaggcacaaacaaatgttt 86
              ||||||||||||||||||||
Sbjct: 129598 gaaggcacaaacaaatgttt 129617
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>gb|U41104.2| Caenorhabditis elegans cosmid T12C9, complete sequence
          Length = 31972

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 96    aaagaatagaaaaaagaata 115
             ||||||||||||||||||||
Sbjct: 15215 aaagaatagaaaaaagaata 15234
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>gb|AC158142.19| Mus musculus chromosome 15, clone RP24-342H15, complete sequence
          Length = 195319

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 290   tccccacctcctcaccacca 309
             ||||||||||||||||||||
Sbjct: 40982 tccccacctcctcaccacca 41001
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>dbj|AP001578.3| Homo sapiens genomic DNA, chromosome 6q25.2, clone:KB1954F7
          Length = 239057

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 93    agaaaagaatagaaaaaaga 112
             ||||||||||||||||||||
Sbjct: 74307 agaaaagaatagaaaaaaga 74288
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>dbj|AP005120.2| Homo sapiens genomic DNA, chromosome 18p clone:RP11-513M1, complete
             sequences
          Length = 125561

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 93    agaaaagaatagaaaaaaga 112
             ||||||||||||||||||||
Sbjct: 40281 agaaaagaatagaaaaaaga 40300


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,613,717
Number of Sequences: 3902068
Number of extensions: 4613717
Number of successful extensions: 106013
Number of sequences better than 10.0: 67
Number of HSP's better than 10.0 without gapping: 67
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 105598
Number of HSP's gapped (non-prelim): 415
length of query: 466
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 444
effective length of database: 17,147,199,772
effective search space: 7613356698768
effective search space used: 7613356698768
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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