Clone Name | rbah62b08 |
---|---|
Clone Library Name | barley_pub |
>gb|AY255673.1| Triticum aestivum methylmalonate semialdehyde dehydrogenase mRNA, partial cds; nuclear gene for mitochondrial product Length = 1415 Score = 837 bits (422), Expect = 0.0 Identities = 504/530 (95%), Gaps = 1/530 (0%) Strand = Plus / Minus Query: 106 tacatgaggtagctcgggtcacttcacttgtgcagaggtgggcatggagagggaaacgcg 165 |||||||| |||||| ||| ||||||||| || ||||||||||||||||| |||||||| Sbjct: 1181 tacatgagttagctccggtgacttcacttctgt-gaggtgggcatggagagagaaacgcg 1123 Query: 166 ctgcacagacggctccttccactgctgtgtgatggtcttgatctgggtgaagaactgcac 225 ||| ||||| ||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 1122 ctggggagacgactccttccactgctgcgtgatggtcttgatctgggtgaagaactgcac 1063 Query: 226 gcccgccttgccgtagaaattcaagtctcctgcgaaggaagctttgctacccgtgaagga 285 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 1062 gcccgccttgccgtagaaattcaagtctcctgcgaaggaagctttgctgcccgtgaagga 1003 Query: 286 gaagaatggtaggggtactgggatcggcacgttgatgcccacctggccagcttcaatgtc 345 ||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 1002 gaagaatggcaggggtactgggatcggcacgttgatacccacctggccagcttcaatgtc 943 Query: 346 tgtctgaaatttccttgctgagacaccagatgtggtaaagatggaagccccattgccata 405 ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 942 cgtctgaaatttccttgctgagacaccagacgtggtaaagatggaagccccattgccata 883 Query: 406 cttgtttctgttcacaatttgtatggcatcatctaggctctctgccttcatcaagagaag 465 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 882 cttgtttctgtttacaatttgtatggcatcatctaggctctctgccttcatcaagagaag 823 Query: 466 aactggaccaaaaatttcctccttgtaacactccatatcacttttaacatcagccaacac 525 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 822 aactggaccaaaaatttcctcctggtaacactccatatcacttttaacatcagccaacac 763 Query: 526 agttggaccaacaaagttgccatcctcgaattgaggaaccacaatctccctcccatccag 585 ||||||||||| ||||||||||||||| ||||||||||||||||||||||| |||||||| Sbjct: 762 agttggaccaataaagttgccatcctcaaattgaggaaccacaatctcccttccatccag 703 Query: 586 cacaatccgagcgccactgtcaacaccactttggactaacttgcagatgc 635 ||||| ||||| ||||||||| ||||||||||||||||||||||||||| Sbjct: 702 cacaagtcgagcaccactgtcagcaccactttggactaacttgcagatgc 653 Score = 93.7 bits (47), Expect = 7e-16 Identities = 61/66 (92%) Strand = Plus / Minus Query: 29 tgaaagacatcacaagagttacccagngtgaaaggcaactccggtgaagcttaaattcca 88 |||||||||||||||||||||||| |||||||||||||| ||||||||||||||||| Sbjct: 1400 tgaaagacatcacaagagttacccttgatgaaaggcaactcctgtgaagcttaaattcca 1341 Query: 89 catcaa 94 |||||| Sbjct: 1340 catcaa 1335
>gb|AY107696.1| Zea mays PCO061337 mRNA sequence Length = 1262 Score = 551 bits (278), Expect = e-154 Identities = 440/494 (89%) Strand = Plus / Minus Query: 140 gaggtgggcatggagagggaaacgcgctgcacagacggctccttccactgctgtgtgatg 199 ||||||||||||||||| || || |||||||| | || ||||||||||||||| ||||| Sbjct: 877 gaggtgggcatggagagcgagacccgctgcaccggcgactccttccactgctgcgtgatc 818 Query: 200 gtcttgatctgggtgaagaactgcacgcccgccttgccgtagaaattcaagtctcctgcg 259 ||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||| Sbjct: 817 gtcttgatctgggtgaagaactgcacgccagccttgccgtagaaattcaaatctcctgcg 758 Query: 260 aaggaagctttgctacccgtgaaggagaagaatggtaggggtactgggatcggcacgttg 319 || ||||||||||| ||||||||||||||||| || ||||| ||||| |||||||||||| Sbjct: 757 aatgaagctttgctgcccgtgaaggagaagaacggcagggggactggaatcggcacgttg 698 Query: 320 atgcccacctggccagcttcaatgtctgtctgaaatttccttgctgagacaccagatgtg 379 ||||||||||||||||||||||||||||| ||||||||||| || ||||| |||||||| Sbjct: 697 atgcccacctggccagcttcaatgtctgtttgaaatttcctggcagagacgccagatgtt 638 Query: 380 gtaaagatggaagccccattgccatacttgtttctgttcacaatttgtatggcatcatct 439 ||||| |||||||| ||||||||||||||||||||||| | |||||| |||||||||||| Sbjct: 637 gtaaatatggaagcaccattgccatacttgtttctgtttataatttggatggcatcatct 578 Query: 440 aggctctctgccttcatcaagagaagaactggaccaaaaatttcctccttgtaacactcc 499 |||||||| |||||||| |||||||| ||||||||||| ||||||||||||||||||||| Sbjct: 577 aggctctccgccttcattaagagaagcactggaccaaatatttcctccttgtaacactcc 518 Query: 500 atatcacttttaacatcagccaacacagttggaccaacaaagttgccatcctcgaattga 559 || ||||||||||||||||||| | ||||| |||||||| || ||||| || | || Sbjct: 517 atgtcacttttaacatcagccagaatggttgggccaacaaaatttccatcttcatagcga 458 Query: 560 ggaaccacaatctccctcccatccagcacaatccgagcgccactgtcaacaccactttgg 619 |||||||| |||| || ||||| |||| || ||||| ||||||||||||||||||||| Sbjct: 457 ggaaccactatctttcttccatcaagcaatatacgagcaccactgtcaacaccactttgg 398 Query: 620 actaacttgcagat 633 ||||| || ||||| Sbjct: 397 actaatttacagat 384
>ref|XM_476941.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1605 Score = 543 bits (274), Expect = e-151 Identities = 439/494 (88%) Strand = Plus / Minus Query: 140 gaggtgggcatggagagggaaacgcgctgcacagacggctccttccactgctgtgtgatg 199 |||||||||||||||||||| |||||||| | | || ||||||||||||||| |||| Sbjct: 1595 gaggtgggcatggagagggagacgcgctgagccggcgactccttccactgctgcgtgacc 1536 Query: 200 gtcttgatctgggtgaagaactgcacgcccgccttgccgtagaaattcaagtctcctgcg 259 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1535 gtcttgatctgggtgaagaactgcacgcccgccttgccgtagaaattcaagtctcctgca 1476 Query: 260 aaggaagctttgctacccgtgaaggagaagaatggtaggggtactgggatcggcacgttg 319 ||||| |||||||| || |||||||||||||| || ||||||||||| |||||||||||| Sbjct: 1475 aaggaggctttgctgccggtgaaggagaagaacggcaggggtactggaatcggcacgttg 1416 Query: 320 atgcccacctggccagcttcaatgtctgtctgaaatttccttgctgagacaccagatgtg 379 ||||||||||||||||||||||||||||| |||||||||||||| || ||||||||||| Sbjct: 1415 atgcccacctggccagcttcaatgtctgtttgaaatttccttgcagacacaccagatgtt 1356 Query: 380 gtaaagatggaagccccattgccatacttgtttctgttcacaatttgtatggcatcatct 439 ||||| ||||| || ||||||||||| |||||||||||||||||||| || ||||||||| Sbjct: 1355 gtaaatatggatgctccattgccatatttgtttctgttcacaatttggatagcatcatct 1296 Query: 440 aggctctctgccttcatcaagagaagaactggaccaaaaatttcctccttgtaacactcc 499 |||||||| |||||||||||||||||||||||||||||||| |||||||||||||| ||| Sbjct: 1295 aggctctcagccttcatcaagagaagaactggaccaaaaatctcctccttgtaacattcc 1236 Query: 500 atatcacttttaacatcagccaacacagttggaccaacaaagttgccatcctcgaattga 559 || ||||||||||||||||| | | |||||||||||||| || |||| |||||| | | Sbjct: 1235 atttcacttttaacatcagcaaggagtgttggaccaacaaaattaccattctcgaagtta 1176 Query: 560 ggaaccacaatctccctcccatccagcacaatccgagcgccactgtcaacaccactttgg 619 ||||||||||| || || ||||| |||| | ||||| ||| | ||| |||||||||| Sbjct: 1175 ggaaccacaatatctcttccatcaagcagcacacgagcaccattatcagcaccactttgt 1116 Query: 620 actaacttgcagat 633 | ||| |||||||| Sbjct: 1115 attaatttgcagat 1102
>dbj|AK121280.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023108H13, full insert sequence Length = 1945 Score = 543 bits (274), Expect = e-151 Identities = 439/494 (88%) Strand = Plus / Minus Query: 140 gaggtgggcatggagagggaaacgcgctgcacagacggctccttccactgctgtgtgatg 199 |||||||||||||||||||| |||||||| | | || ||||||||||||||| |||| Sbjct: 1703 gaggtgggcatggagagggagacgcgctgagccggcgactccttccactgctgcgtgacc 1644 Query: 200 gtcttgatctgggtgaagaactgcacgcccgccttgccgtagaaattcaagtctcctgcg 259 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1643 gtcttgatctgggtgaagaactgcacgcccgccttgccgtagaaattcaagtctcctgca 1584 Query: 260 aaggaagctttgctacccgtgaaggagaagaatggtaggggtactgggatcggcacgttg 319 ||||| |||||||| || |||||||||||||| || ||||||||||| |||||||||||| Sbjct: 1583 aaggaggctttgctgccggtgaaggagaagaacggcaggggtactggaatcggcacgttg 1524 Query: 320 atgcccacctggccagcttcaatgtctgtctgaaatttccttgctgagacaccagatgtg 379 ||||||||||||||||||||||||||||| |||||||||||||| || ||||||||||| Sbjct: 1523 atgcccacctggccagcttcaatgtctgtttgaaatttccttgcagacacaccagatgtt 1464 Query: 380 gtaaagatggaagccccattgccatacttgtttctgttcacaatttgtatggcatcatct 439 ||||| ||||| || ||||||||||| |||||||||||||||||||| || ||||||||| Sbjct: 1463 gtaaatatggatgctccattgccatatttgtttctgttcacaatttggatagcatcatct 1404 Query: 440 aggctctctgccttcatcaagagaagaactggaccaaaaatttcctccttgtaacactcc 499 |||||||| |||||||||||||||||||||||||||||||| |||||||||||||| ||| Sbjct: 1403 aggctctcagccttcatcaagagaagaactggaccaaaaatctcctccttgtaacattcc 1344 Query: 500 atatcacttttaacatcagccaacacagttggaccaacaaagttgccatcctcgaattga 559 || ||||||||||||||||| | | |||||||||||||| || |||| |||||| | | Sbjct: 1343 atttcacttttaacatcagcaaggagtgttggaccaacaaaattaccattctcgaagtta 1284 Query: 560 ggaaccacaatctccctcccatccagcacaatccgagcgccactgtcaacaccactttgg 619 ||||||||||| || || ||||| |||| | ||||| ||| | ||| |||||||||| Sbjct: 1283 ggaaccacaatatctcttccatcaagcagcacacgagcaccattatcagcaccactttgt 1224 Query: 620 actaacttgcagat 633 | ||| |||||||| Sbjct: 1223 attaatttgcagat 1210
>dbj|AK065917.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013045P03, full insert sequence Length = 1132 Score = 543 bits (274), Expect = e-151 Identities = 439/494 (88%) Strand = Plus / Minus Query: 140 gaggtgggcatggagagggaaacgcgctgcacagacggctccttccactgctgtgtgatg 199 |||||||||||||||||||| |||||||| | | || ||||||||||||||| |||| Sbjct: 920 gaggtgggcatggagagggagacgcgctgagccggcgactccttccactgctgcgtgacc 861 Query: 200 gtcttgatctgggtgaagaactgcacgcccgccttgccgtagaaattcaagtctcctgcg 259 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 860 gtcttgatctgggtgaagaactgcacgcccgccttgccgtagaaattcaagtctcctgca 801 Query: 260 aaggaagctttgctacccgtgaaggagaagaatggtaggggtactgggatcggcacgttg 319 ||||| |||||||| || |||||||||||||| || ||||||||||| |||||||||||| Sbjct: 800 aaggaggctttgctgccggtgaaggagaagaacggcaggggtactggaatcggcacgttg 741 Query: 320 atgcccacctggccagcttcaatgtctgtctgaaatttccttgctgagacaccagatgtg 379 ||||||||||||||||||||||||||||| |||||||||||||| || ||||||||||| Sbjct: 740 atgcccacctggccagcttcaatgtctgtttgaaatttccttgcagacacaccagatgtt 681 Query: 380 gtaaagatggaagccccattgccatacttgtttctgttcacaatttgtatggcatcatct 439 ||||| ||||| || ||||||||||| |||||||||||||||||||| || ||||||||| Sbjct: 680 gtaaatatggatgctccattgccatatttgtttctgttcacaatttggatagcatcatct 621 Query: 440 aggctctctgccttcatcaagagaagaactggaccaaaaatttcctccttgtaacactcc 499 |||||||| |||||||||||||||||||||||||||||||| |||||||||||||| ||| Sbjct: 620 aggctctcagccttcatcaagagaagaactggaccaaaaatctcctccttgtaacattcc 561 Query: 500 atatcacttttaacatcagccaacacagttggaccaacaaagttgccatcctcgaattga 559 || ||||||||||||||||| | | |||||||||||||| || |||| |||||| | | Sbjct: 560 atttcacttttaacatcagcaaggagtgttggaccaacaaaattaccattctcgaagtta 501 Query: 560 ggaaccacaatctccctcccatccagcacaatccgagcgccactgtcaacaccactttgg 619 ||||||||||| || || ||||| |||| | ||||| ||| | ||| |||||||||| Sbjct: 500 ggaaccacaatatctcttccatcaagcagcacacgagcaccattatcagcaccactttgt 441 Query: 620 actaacttgcagat 633 | ||| |||||||| Sbjct: 440 attaatttgcagat 427
>gb|AF045770.1|AF045770 Oryza sativa methylmalonate semi-aldehyde dehydrogenase (MMSDH1) mRNA, complete cds Length = 1864 Score = 500 bits (252), Expect = e-138 Identities = 434/494 (87%), Gaps = 3/494 (0%) Strand = Plus / Minus Query: 140 gaggtgggcatggagagggaaacgcgctgcacagacggctccttccactgctgtgtgatg 199 |||||||||||||||||||| |||||||| | | || ||||||||||||||| |||| Sbjct: 1693 gaggtgggcatggagagggagacgcgctgagccggcgactccttccactgctgcgtgacc 1634 Query: 200 gtcttgatctgggtgaagaactgcacgcccgccttgccgtagaaattcaagtctcctgcg 259 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1633 gtcttgatctgggtgaagaactgcacgcccgccttgccgtagaaattcaagtctcctgca 1574 Query: 260 aaggaagctttgctacccgtgaaggagaagaatggtaggggtactgggatcggcacgttg 319 |||||||||||||| || || ||||||||||| || |||||| |||| |||||||||||| Sbjct: 1573 aaggaagctttgctgccggtaaaggagaagaacggcaggggttctggaatcggcacgttg 1514 Query: 320 atgcccacctggccagcttcaatgtctgtctgaaatttccttgctgagacaccagatgtg 379 ||||||||||||||||||||||||||||| |||||||||||||| || ||||||||||| Sbjct: 1513 atgcccacctggccagcttcaatgtctgtttgaaatttccttgcagacacaccagatgtt 1454 Query: 380 gtaaagatggaagccccattgccatacttgtttctgttcacaatttgtatggcatcatct 439 ||||| ||||| || ||||||||||| |||||||||||||||||||| || ||||||| | Sbjct: 1453 gtaaatatggatgctccattgccatatttgtttctgttcacaatttggatagcatcattt 1394 Query: 440 aggctctctgccttcatcaagagaagaactggaccaaaaatttcctccttgtaacactcc 499 |||||||| |||||||||||| ||||||||||||||||| |||||||||||||| ||| Sbjct: 1393 aggctctcagccttcatcaag---agaactggaccaaaaatctcctccttgtaacattcc 1337 Query: 500 atatcacttttaacatcagccaacacagttggaccaacaaagttgccatcctcgaattga 559 || ||||||||||||||||| | | |||||||||||||| || |||| |||||| | | Sbjct: 1336 atttcacttttaacatcagcaaggagtgttggaccaacaaaattaccattctcgaagtta 1277 Query: 560 ggaaccacaatctccctcccatccagcacaatccgagcgccactgtcaacaccactttgg 619 ||||||||||| || || ||||| |||| | ||||| ||| | ||| |||||||||| Sbjct: 1276 ggaaccacaatatctcttccatcaagcagcacacgagcaccattatcagcaccactttgt 1217 Query: 620 actaacttgcagat 633 | ||| |||||||| Sbjct: 1216 attaatttgcagat 1203
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 133 bits (67), Expect = 8e-28 Identities = 88/95 (92%) Strand = Plus / Minus Query: 236 ccgtagaaattcaagtctcctgcgaaggaagctttgctacccgtgaaggagaagaatggt 295 ||||||||||||||||||||||| ||||| |||||||| || |||||||||||||| || Sbjct: 4773126 ccgtagaaattcaagtctcctgcaaaggaggctttgctgccggtgaaggagaagaacggc 4773067 Query: 296 aggggtactgggatcggcacgttgatgcccacctg 330 ||||||||||| ||||||||||||||||||||||| Sbjct: 4773066 aggggtactggaatcggcacgttgatgcccacctg 4773032 Score = 123 bits (62), Expect = 7e-25 Identities = 89/98 (90%) Strand = Plus / Minus Query: 140 gaggtgggcatggagagggaaacgcgctgcacagacggctccttccactgctgtgtgatg 199 |||||||||||||||||||| |||||||| | | || ||||||||||||||| |||| Sbjct: 4773364 gaggtgggcatggagagggagacgcgctgagccggcgactccttccactgctgcgtgacc 4773305 Query: 200 gtcttgatctgggtgaagaactgcacgcccgccttgcc 237 |||||||||||||||||||||||||||||||||||||| Sbjct: 4773304 gtcttgatctgggtgaagaactgcacgcccgccttgcc 4773267 Score = 103 bits (52), Expect = 7e-19 Identities = 73/80 (91%) Strand = Plus / Minus Query: 326 acctggccagcttcaatgtctgtctgaaatttccttgctgagacaccagatgtggtaaag 385 ||||||||||||||||||||||| |||||||||||||| || ||||||||||| ||||| Sbjct: 4772647 acctggccagcttcaatgtctgtttgaaatttccttgcagacacaccagatgttgtaaat 4772588 Query: 386 atggaagccccattgccata 405 ||||| || ||||||||||| Sbjct: 4772587 atggatgctccattgccata 4772568 Score = 73.8 bits (37), Expect = 6e-10 Identities = 46/49 (93%) Strand = Plus / Minus Query: 404 tacttgtttctgttcacaatttgtatggcatcatctaggctctctgcct 452 ||||||||||||||||||||||| || ||||||||||||||||| |||| Sbjct: 4772471 tacttgtttctgttcacaatttggatagcatcatctaggctctcagcct 4772423 Score = 69.9 bits (35), Expect = 1e-08 Identities = 38/39 (97%) Strand = Plus / Minus Query: 450 ccttcatcaagagaagaactggaccaaaaatttcctcct 488 ||||||||||||||||||||||||||||||| ||||||| Sbjct: 4772351 ccttcatcaagagaagaactggaccaaaaatctcctcct 4772313 Score = 63.9 bits (32), Expect = 6e-07 Identities = 68/80 (85%) Strand = Plus / Minus Query: 486 ccttgtaacactccatatcacttttaacatcagccaacacagttggaccaacaaagttgc 545 |||||||||| ||||| ||||||||||||||||| | | |||||||||||||| || | Sbjct: 4771408 ccttgtaacattccatttcacttttaacatcagcaaggagtgttggaccaacaaaattac 4771349 Query: 546 catcctcgaattgaggaacc 565 ||| |||||| | ||||||| Sbjct: 4771348 cattctcgaagttaggaacc 4771329 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 81 aaattccacatcaaatatgtc 101 ||||||||||||||||||||| Sbjct: 25537477 aaattccacatcaaatatgtc 25537497
>dbj|AP005179.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0084L07 Length = 127992 Score = 133 bits (67), Expect = 8e-28 Identities = 88/95 (92%) Strand = Plus / Minus Query: 236 ccgtagaaattcaagtctcctgcgaaggaagctttgctacccgtgaaggagaagaatggt 295 ||||||||||||||||||||||| ||||| |||||||| || |||||||||||||| || Sbjct: 91036 ccgtagaaattcaagtctcctgcaaaggaggctttgctgccggtgaaggagaagaacggc 90977 Query: 296 aggggtactgggatcggcacgttgatgcccacctg 330 ||||||||||| ||||||||||||||||||||||| Sbjct: 90976 aggggtactggaatcggcacgttgatgcccacctg 90942 Score = 123 bits (62), Expect = 7e-25 Identities = 89/98 (90%) Strand = Plus / Minus Query: 140 gaggtgggcatggagagggaaacgcgctgcacagacggctccttccactgctgtgtgatg 199 |||||||||||||||||||| |||||||| | | || ||||||||||||||| |||| Sbjct: 91274 gaggtgggcatggagagggagacgcgctgagccggcgactccttccactgctgcgtgacc 91215 Query: 200 gtcttgatctgggtgaagaactgcacgcccgccttgcc 237 |||||||||||||||||||||||||||||||||||||| Sbjct: 91214 gtcttgatctgggtgaagaactgcacgcccgccttgcc 91177 Score = 103 bits (52), Expect = 7e-19 Identities = 73/80 (91%) Strand = Plus / Minus Query: 326 acctggccagcttcaatgtctgtctgaaatttccttgctgagacaccagatgtggtaaag 385 ||||||||||||||||||||||| |||||||||||||| || ||||||||||| ||||| Sbjct: 90557 acctggccagcttcaatgtctgtttgaaatttccttgcagacacaccagatgttgtaaat 90498 Query: 386 atggaagccccattgccata 405 ||||| || ||||||||||| Sbjct: 90497 atggatgctccattgccata 90478 Score = 73.8 bits (37), Expect = 6e-10 Identities = 46/49 (93%) Strand = Plus / Minus Query: 404 tacttgtttctgttcacaatttgtatggcatcatctaggctctctgcct 452 ||||||||||||||||||||||| || ||||||||||||||||| |||| Sbjct: 90381 tacttgtttctgttcacaatttggatagcatcatctaggctctcagcct 90333 Score = 69.9 bits (35), Expect = 1e-08 Identities = 38/39 (97%) Strand = Plus / Minus Query: 450 ccttcatcaagagaagaactggaccaaaaatttcctcct 488 ||||||||||||||||||||||||||||||| ||||||| Sbjct: 90261 ccttcatcaagagaagaactggaccaaaaatctcctcct 90223 Score = 63.9 bits (32), Expect = 6e-07 Identities = 68/80 (85%) Strand = Plus / Minus Query: 486 ccttgtaacactccatatcacttttaacatcagccaacacagttggaccaacaaagttgc 545 |||||||||| ||||| ||||||||||||||||| | | |||||||||||||| || | Sbjct: 89318 ccttgtaacattccatttcacttttaacatcagcaaggagtgttggaccaacaaaattac 89259 Query: 546 catcctcgaattgaggaacc 565 ||| |||||| | ||||||| Sbjct: 89258 cattctcgaagttaggaacc 89239
>dbj|AP005877.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0002L09 Length = 146343 Score = 133 bits (67), Expect = 8e-28 Identities = 88/95 (92%) Strand = Plus / Minus Query: 236 ccgtagaaattcaagtctcctgcgaaggaagctttgctacccgtgaaggagaagaatggt 295 ||||||||||||||||||||||| ||||| |||||||| || |||||||||||||| || Sbjct: 47639 ccgtagaaattcaagtctcctgcaaaggaggctttgctgccggtgaaggagaagaacggc 47580 Query: 296 aggggtactgggatcggcacgttgatgcccacctg 330 ||||||||||| ||||||||||||||||||||||| Sbjct: 47579 aggggtactggaatcggcacgttgatgcccacctg 47545 Score = 123 bits (62), Expect = 7e-25 Identities = 89/98 (90%) Strand = Plus / Minus Query: 140 gaggtgggcatggagagggaaacgcgctgcacagacggctccttccactgctgtgtgatg 199 |||||||||||||||||||| |||||||| | | || ||||||||||||||| |||| Sbjct: 47877 gaggtgggcatggagagggagacgcgctgagccggcgactccttccactgctgcgtgacc 47818 Query: 200 gtcttgatctgggtgaagaactgcacgcccgccttgcc 237 |||||||||||||||||||||||||||||||||||||| Sbjct: 47817 gtcttgatctgggtgaagaactgcacgcccgccttgcc 47780 Score = 103 bits (52), Expect = 7e-19 Identities = 73/80 (91%) Strand = Plus / Minus Query: 326 acctggccagcttcaatgtctgtctgaaatttccttgctgagacaccagatgtggtaaag 385 ||||||||||||||||||||||| |||||||||||||| || ||||||||||| ||||| Sbjct: 47160 acctggccagcttcaatgtctgtttgaaatttccttgcagacacaccagatgttgtaaat 47101 Query: 386 atggaagccccattgccata 405 ||||| || ||||||||||| Sbjct: 47100 atggatgctccattgccata 47081 Score = 73.8 bits (37), Expect = 6e-10 Identities = 46/49 (93%) Strand = Plus / Minus Query: 404 tacttgtttctgttcacaatttgtatggcatcatctaggctctctgcct 452 ||||||||||||||||||||||| || ||||||||||||||||| |||| Sbjct: 46984 tacttgtttctgttcacaatttggatagcatcatctaggctctcagcct 46936 Score = 69.9 bits (35), Expect = 1e-08 Identities = 38/39 (97%) Strand = Plus / Minus Query: 450 ccttcatcaagagaagaactggaccaaaaatttcctcct 488 ||||||||||||||||||||||||||||||| ||||||| Sbjct: 46864 ccttcatcaagagaagaactggaccaaaaatctcctcct 46826 Score = 63.9 bits (32), Expect = 6e-07 Identities = 68/80 (85%) Strand = Plus / Minus Query: 486 ccttgtaacactccatatcacttttaacatcagccaacacagttggaccaacaaagttgc 545 |||||||||| ||||| ||||||||||||||||| | | |||||||||||||| || | Sbjct: 45921 ccttgtaacattccatttcacttttaacatcagcaaggagtgttggaccaacaaaattac 45862 Query: 546 catcctcgaattgaggaacc 565 ||| |||||| | ||||||| Sbjct: 45861 cattctcgaagttaggaacc 45842
>gb|AE004509.1| Pseudomonas aeruginosa PAO1, section 70 of 529 of the complete genome Length = 11717 Score = 71.9 bits (36), Expect = 2e-09 Identities = 51/56 (91%) Strand = Plus / Plus Query: 278 gtgaaggagaagaatggtaggggtactgggatcggcacgttgatgcccacctggcc 333 |||||||||||||| || || ||||| ||||||||||||||||| ||||||||||| Sbjct: 10293 gtgaaggagaagaacggcagcggtaccgggatcggcacgttgatacccacctggcc 10348
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 58.0 bits (29), Expect = 4e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 305 gggatcggcacgttgatgcccacctggcc 333 ||||||||||||||||||||||||||||| Sbjct: 2271143 gggatcggcacgttgatgcccacctggcc 2271171
>gb|AE004778.1| Pseudomonas aeruginosa PAO1, section 339 of 529 of the complete genome Length = 11589 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 278 gtgaaggagaagaatggtaggggtactgggatcggcacgttgatgcccacctggcc 333 |||||||||||||| || || ||||| || ||||| | |||||||||||||||||| Sbjct: 1139 gtgaaggagaagaacggcagcggtaccggaatcgggatgttgatgcccacctggcc 1194
>gb|AE016796.1| Vibrio vulnificus CMCP6 chromosome II, complete sequence Length = 1844853 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 284 gagaagaatggtaggggtactgggatcggcacgttgatgcccac 327 |||||||| || || ||||||||||||||||| ||||||||||| Sbjct: 546677 gagaagaaaggcagtggtactgggatcggcacattgatgcccac 546720
>gb|M84911.1|PSEMMSRAB Pseudomonas aeruginosa methylmalonate semialdehyde dehydrogenase (mmsA) gene complete cds, 3-hydroxyisobutyrate dehydrogenase (mmsB) gene complete cds, ORF1 5'end Length = 5417 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Minus Query: 278 gtgaaggagaagaatggtaggggtactgggatcggcacgttgatgcccacctggcc 333 |||||||||||||| || || ||||| || ||||| | |||||||||||||||||| Sbjct: 2866 gtgaaggagaagaacggcagcggtaccggaatcgggatgttgatgcccacctggcc 2811
>ref|NM_126989.1| Arabidopsis thaliana ALDH6B2; aldehyde dehydrogenase/ oxidoreductase AT2G14170 (ALDH6B2) mRNA, complete cds Length = 2195 Score = 54.0 bits (27), Expect = 6e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 463 aagaactggaccaaaaatttcctccttgtaacactccat 501 |||||| || ||||| ||||||||||||||||||||||| Sbjct: 1491 aagaacagggccaaatatttcctccttgtaacactccat 1453
>dbj|AP004526.1| Lotus japonicus genomic DNA, chromosome 6, clone:LjT05E07, TM0055, complete sequence Length = 94516 Score = 54.0 bits (27), Expect = 6e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 326 acctggccagcttcaatgtctgtctgaaatttccttgctgagacacc 372 ||||| ||||| ||||| |||||||||||||||||||| || ||||| Sbjct: 66389 acctgcccagcctcaatctctgtctgaaatttccttgcagacacacc 66343 Score = 48.1 bits (24), Expect = 0.036 Identities = 27/28 (96%) Strand = Plus / Minus Query: 461 agaagaactggaccaaaaatttcctcct 488 |||||||||||||||||||| ||||||| Sbjct: 65995 agaagaactggaccaaaaatctcctcct 65968
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 299 ggtactgggatcggcacgttgatgcccacc 328 ||||| |||||||||||||||||||||||| Sbjct: 2745058 ggtaccgggatcggcacgttgatgcccacc 2745029
>ref|XM_522903.1| PREDICTED: Pan troglodytes similar to aldehyde dehydrogenase 6A1 precursor; mitochondrial acylating methylmalonate-semialdehyde dehydrogenase (LOC467506), mRNA Length = 1779 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Minus Query: 463 aagaactggaccaaaaatttcctccttgtaaca 495 |||||||||||||||||| ||||| |||||||| Sbjct: 1440 aagaactggaccaaaaatctcctctttgtaaca 1408
>gb|BC044808.1| Homo sapiens chromosome 14 open reading frame 45, mRNA (cDNA clone IMAGE:4823236) Length = 3070 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Plus Query: 463 aagaactggaccaaaaatttcctccttgtaaca 495 |||||||||||||||||| ||||| |||||||| Sbjct: 2267 aagaactggaccaaaaatctcctctttgtaaca 2299
>gb|BC004909.1| Homo sapiens aldehyde dehydrogenase 6 family, member A1, mRNA (cDNA clone MGC:4657 IMAGE:3530715), complete cds Length = 1854 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Minus Query: 463 aagaactggaccaaaaatttcctccttgtaaca 495 |||||||||||||||||| ||||| |||||||| Sbjct: 1300 aagaactggaccaaaaatctcctctttgtaaca 1268
>ref|NM_025057.1| Homo sapiens chromosome 14 open reading frame 45 (C14orf45), mRNA Length = 2157 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Plus Query: 463 aagaactggaccaaaaatttcctccttgtaaca 495 |||||||||||||||||| ||||| |||||||| Sbjct: 1363 aagaactggaccaaaaatctcctctttgtaaca 1395
>ref|XM_547901.2| PREDICTED: Canis familiaris similar to aldehyde dehydrogenase family 6, subfamily A1 (LOC490779), mRNA Length = 2165 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Minus Query: 463 aagaactggaccaaaaatttcctccttgtaaca 495 |||||||||||||||||| ||||| |||||||| Sbjct: 1271 aagaactggaccaaaaatctcctctttgtaaca 1239
>gb|AC123898.40| Medicago truncatula clone mth2-31m6, complete sequence Length = 152299 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Minus Query: 460 gagaagaactggaccaaaaatttcctcct 488 |||||||||||| |||||||||||||||| Sbjct: 127082 gagaagaactgggccaaaaatttcctcct 127054
>ref|NM_005589.2| Homo sapiens aldehyde dehydrogenase 6 family, member A1 (ALDH6A1), nuclear gene encoding mitochondrial protein, mRNA Length = 2183 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Minus Query: 463 aagaactggaccaaaaatttcctccttgtaaca 495 |||||||||||||||||| ||||| |||||||| Sbjct: 1368 aagaactggaccaaaaatctcctctttgtaaca 1336
>emb|AJ249994.1|HSA249994 Homo sapiens mRNA for methylmalonate semialdehyde dehydrogenase (MMSDH gene) Length = 1760 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Minus Query: 463 aagaactggaccaaaaatttcctccttgtaaca 495 |||||||||||||||||| ||||| |||||||| Sbjct: 1299 aagaactggaccaaaaatctcctctttgtaaca 1267
>emb|AL834487.1|HSM805595 Homo sapiens mRNA; cDNA DKFZp434O1830 (from clone DKFZp434O1830) Length = 2399 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Plus Query: 463 aagaactggaccaaaaatttcctccttgtaaca 495 |||||||||||||||||| ||||| |||||||| Sbjct: 1605 aagaactggaccaaaaatctcctctttgtaaca 1637
>emb|CR613362.1| full-length cDNA clone CS0DJ002YF01 of T cells (Jurkat cell line) Cot 10-normalized of Homo sapiens (human) Length = 1566 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Minus Query: 463 aagaactggaccaaaaatttcctccttgtaaca 495 |||||||||||||||||| ||||| |||||||| Sbjct: 545 aagaactggaccaaaaatctcctctttgtaaca 513
>gb|AE012225.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 133 of 460 of the complete genome Length = 10544 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Minus Query: 305 gggatcggcacgttgatgcccacctggcc 333 |||||||||||||||||||| |||||||| Sbjct: 5997 gggatcggcacgttgatgccgacctggcc 5969
>dbj|AB168673.1| Macaca fascicularis testis cDNA clone: QtsA-14062, similar to human chromosome 14 open reading frame 45 (C14orf45), mRNA, RefSeq: NM_025057.1 Length = 2415 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Plus Query: 463 aagaactggaccaaaaatttcctccttgtaaca 495 |||||||||||||||||| ||||| |||||||| Sbjct: 1602 aagaactggaccaaaaatctcctctttgtaaca 1634
>dbj|AB168336.1| Macaca fascicularis testis cDNA clone: QtsA-11302, similar to human chromosome 14 open reading frame 45 (C14orf45), mRNA, RefSeq: NM_025057.1 Length = 2650 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Plus Query: 463 aagaactggaccaaaaatttcctccttgtaaca 495 |||||||||||||||||| ||||| |||||||| Sbjct: 1852 aagaactggaccaaaaatctcctctttgtaaca 1884
>gb|AC148971.3| Medicago truncatula chromosome 2 BAC clone mth2-79e23, complete sequence Length = 108394 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Plus Query: 460 gagaagaactggaccaaaaatttcctcct 488 |||||||||||| |||||||||||||||| Sbjct: 98407 gagaagaactgggccaaaaatttcctcct 98435
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome Length = 5148708 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Plus Query: 305 gggatcggcacgttgatgcccacctggcc 333 |||||||||||||||||||| |||||||| Sbjct: 3568031 gggatcggcacgttgatgccgacctggcc 3568059
>dbj|AK223244.1| Homo sapiens mRNA for aldehyde dehydrogenase 6A1 precursor variant, clone: STM03756 Length = 1712 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Minus Query: 463 aagaactggaccaaaaatttcctccttgtaaca 495 |||||||||||||||||| ||||| |||||||| Sbjct: 1280 aagaactggaccaaaaatctcctctttgtaaca 1248
>dbj|AK222687.1| Homo sapiens mRNA for aldehyde dehydrogenase 6A1 precursor variant, clone: CBR04189 Length = 2028 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Minus Query: 463 aagaactggaccaaaaatttcctccttgtaaca 495 |||||||||||||||||| ||||| |||||||| Sbjct: 1306 aagaactggaccaaaaatctcctctttgtaaca 1274
>ref|NM_175811.2| Bos taurus aldehyde dehydrogenase 6 family, member A1 (ALDH6A1), mRNA Length = 1687 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Minus Query: 463 aagaactggaccaaaaatttcctccttgtaaca 495 ||||||||| |||||||| |||||||||||||| Sbjct: 1317 aagaactgggccaaaaatctcctccttgtaaca 1285
>ref|NM_031057.1| Rattus norvegicus aldehyde dehydrogenase family 6, subfamily A1 (Aldh6a1), mRNA Length = 2059 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Minus Query: 463 aagaactggaccaaaaatttcctccttgtaaca 495 |||||||||||||||||| ||||| |||||||| Sbjct: 1350 aagaactggaccaaaaatctcctctttgtaaca 1318
>gb|AF148855.1|AF148855 Homo sapiens methylmalonate-semialdehyde dehydrogenase (MMSDH) gene, complete cds Length = 6791 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Minus Query: 463 aagaactggaccaaaaatttcctccttgtaaca 495 |||||||||||||||||| ||||| |||||||| Sbjct: 6070 aagaactggaccaaaaatctcctctttgtaaca 6038
>gb|AC005484.2|AC005484 Homo sapiens PAC clone RP5-847O8 from 14q24.3, complete sequence Length = 131943 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Minus Query: 463 aagaactggaccaaaaatttcctccttgtaaca 495 |||||||||||||||||| ||||| |||||||| Sbjct: 75774 aagaactggaccaaaaatctcctctttgtaaca 75742
>gb|AF159889.1|AF159889 Homo sapiens methylmalonate semialdehyde dehydrogenase (MMSDH) mRNA, complete cds Length = 1738 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Minus Query: 463 aagaactggaccaaaaatttcctccttgtaaca 495 |||||||||||||||||| ||||| |||||||| Sbjct: 1269 aagaactggaccaaaaatctcctctttgtaaca 1237
>dbj|BA000004.3| Bacillus halodurans C-125 DNA, complete genome Length = 4202352 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Minus Query: 466 aactggaccaaaaatttcctccttg 490 ||||||||||||||||||||||||| Sbjct: 574357 aactggaccaaaaatttcctccttg 574333
>dbj|AK026842.1| Homo sapiens cDNA: FLJ23189 fis, clone LNG12061 Length = 2157 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Plus Query: 463 aagaactggaccaaaaatttcctccttgtaaca 495 |||||||||||||||||| ||||| |||||||| Sbjct: 1363 aagaactggaccaaaaatctcctctttgtaaca 1395
>gb|AF148505.1|AF148505 Homo sapiens methylmalonate-semialdehyde dehydrogenase (MMSDH) mRNA, complete cds Length = 1780 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Minus Query: 463 aagaactggaccaaaaatttcctccttgtaaca 495 |||||||||||||||||| ||||| |||||||| Sbjct: 1311 aagaactggaccaaaaatctcctctttgtaaca 1279
>gb|BC032371.1| Homo sapiens aldehyde dehydrogenase 6 family, member A1, mRNA (cDNA clone MGC:40271 IMAGE:5163797), complete cds Length = 2104 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Minus Query: 463 aagaactggaccaaaaatttcctccttgtaaca 495 |||||||||||||||||| ||||| |||||||| Sbjct: 1368 aagaactggaccaaaaatctcctctttgtaaca 1336
>gb|M93401.1|RATMSADHA Rattus norvegicus methylmalonate semialdehyde dehydrogenase gene, complete cds Length = 2059 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Minus Query: 463 aagaactggaccaaaaatttcctccttgtaaca 495 |||||||||||||||||| ||||| |||||||| Sbjct: 1350 aagaactggaccaaaaatctcctctttgtaaca 1318
>gb|M93405.1|HUMMSADHA Human methylmalonate semialdehyde dehydrogenase gene, complete cds Length = 1423 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Minus Query: 463 aagaactggaccaaaaatttcctccttgtaaca 495 |||||||||||||||||| ||||| |||||||| Sbjct: 954 aagaactggaccaaaaatctcctctttgtaaca 922
>gb|L08643.1|BOVMMSA Bos taurus methylmalonate semialdehyde dehydrogenase mRNA, complete cds Length = 1687 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Minus Query: 463 aagaactggaccaaaaatttcctccttgtaaca 495 ||||||||| |||||||| |||||||||||||| Sbjct: 1317 aagaactgggccaaaaatctcctccttgtaaca 1285
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 48.1 bits (24), Expect = 0.036 Identities = 24/24 (100%) Strand = Plus / Minus Query: 305 gggatcggcacgttgatgcccacc 328 |||||||||||||||||||||||| Sbjct: 3022069 gggatcggcacgttgatgcccacc 3022046
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 48.1 bits (24), Expect = 0.036 Identities = 24/24 (100%) Strand = Plus / Plus Query: 305 gggatcggcacgttgatgcccacc 328 |||||||||||||||||||||||| Sbjct: 210211 gggatcggcacgttgatgcccacc 210234
>ref|XM_746452.1| Aspergillus fumigatus Af293 methylmalonate-semialdehyde dehydrogenase (Afu4g12870) partial mRNA Length = 1809 Score = 48.1 bits (24), Expect = 0.036 Identities = 57/68 (83%) Strand = Plus / Minus Query: 278 gtgaaggagaagaatggtaggggtactgggatcggcacgttgatgcccacctggccagct 337 ||||||||||| | |||||||| || ||||| || || |||||||| |||||||| || Sbjct: 1652 gtgaaggagaacatgggtagggggacggggatggggacattgatgccgacctggccggcc 1593 Query: 338 tcaatgtc 345 |||||||| Sbjct: 1592 tcaatgtc 1585
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 48.1 bits (24), Expect = 0.036 Identities = 24/24 (100%) Strand = Plus / Plus Query: 305 gggatcggcacgttgatgcccacc 328 |||||||||||||||||||||||| Sbjct: 4061983 gggatcggcacgttgatgcccacc 4062006
>dbj|BA000038.2| Vibrio vulnificus YJ016 DNA, chromosome II, complete sequence Length = 1857073 Score = 48.1 bits (24), Expect = 0.036 Identities = 39/44 (88%) Strand = Plus / Plus Query: 284 gagaagaatggtaggggtactgggatcggcacgttgatgcccac 327 |||||||| || || ||||||||||| ||||| ||||||||||| Sbjct: 1170839 gagaagaaaggaagtggtactgggattggcacattgatgcccac 1170882
>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome Length = 4940217 Score = 48.1 bits (24), Expect = 0.036 Identities = 30/32 (93%) Strand = Plus / Minus Query: 302 actgggatcggcacgttgatgcccacctggcc 333 ||||| ||||||||||||||||| |||||||| Sbjct: 1920909 actggaatcggcacgttgatgccgacctggcc 1920878
>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome Length = 4941439 Score = 48.1 bits (24), Expect = 0.036 Identities = 30/32 (93%) Strand = Plus / Minus Query: 302 actgggatcggcacgttgatgcccacctggcc 333 ||||| ||||||||||||||||| |||||||| Sbjct: 1942934 actggaatcggcacgttgatgccgacctggcc 1942903
>ref|XM_631303.1| Dictyostelium discoideum methylmalonate-semialdehyde dehydrogenase (acylating) (DDB0231483), partial mRNA Length = 1587 Score = 44.1 bits (22), Expect = 0.55 Identities = 28/30 (93%) Strand = Plus / Minus Query: 466 aactggaccaaaaatttcctccttgtaaca 495 |||||||||||| |||||||| |||||||| Sbjct: 1239 aactggaccaaagatttcctctttgtaaca 1210 Score = 40.1 bits (20), Expect = 8.7 Identities = 29/32 (90%) Strand = Plus / Minus Query: 278 gtgaaggagaagaatggtaggggtactgggat 309 ||||||||||||||||| || || |||||||| Sbjct: 1427 gtgaaggagaagaatggaagtggaactgggat 1396
>gb|AE017131.1| Yersinia pestis biovar Medievalis str. 91001 section 5 of 16 of the complete genome Length = 291847 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Plus Query: 299 ggtactgggatcggcacgttga 320 |||||||||||||||||||||| Sbjct: 59710 ggtactgggatcggcacgttga 59731
>ref|XM_363680.1| Magnaporthe grisea 70-15 hypothetical protein (MG01606.4) partial mRNA Length = 1632 Score = 44.1 bits (22), Expect = 0.55 Identities = 34/38 (89%) Strand = Plus / Minus Query: 296 aggggtactgggatcggcacgttgatgcccacctggcc 333 ||||| || ||||| |||||||||||||| |||||||| Sbjct: 1457 aggggcacggggatgggcacgttgatgccgacctggcc 1420
>gb|AE009952.1| Yersinia pestis KIM, complete genome Length = 4600755 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Minus Query: 299 ggtactgggatcggcacgttga 320 |||||||||||||||||||||| Sbjct: 1294303 ggtactgggatcggcacgttga 1294282
>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome Length = 5178466 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Minus Query: 308 atcggcacgttgatgcccacctggcc 333 ||||||||||||||||| |||||||| Sbjct: 1541942 atcggcacgttgatgccgacctggcc 1541917
>emb|BX936398.1| Yersinia pseudotuberculosis IP32953 genome, complete sequence Length = 4744671 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Minus Query: 299 ggtactgggatcggcacgttga 320 |||||||||||||||||||||| Sbjct: 1287033 ggtactgggatcggcacgttga 1287012
>emb|AJ414152.1| Yersinia pestis strain CO92 complete genome; segment 12/20 Length = 313050 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Minus Query: 299 ggtactgggatcggcacgttga 320 |||||||||||||||||||||| Sbjct: 298134 ggtactgggatcggcacgttga 298113
>dbj|BA000022.2| Synechocystis sp. PCC 6803 DNA, complete genome Length = 3573470 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Plus Query: 467 actggaccaaaaatttcctcct 488 |||||||||||||||||||||| Sbjct: 1966471 actggaccaaaaatttcctcct 1966492
>gb|BC033440.1| Mus musculus aldehyde dehydrogenase family 6, subfamily A1, mRNA (cDNA clone MGC:28587 IMAGE:4212084), complete cds Length = 3377 Score = 42.1 bits (21), Expect = 2.2 Identities = 30/33 (90%) Strand = Plus / Minus Query: 463 aagaactggaccaaaaatttcctccttgtaaca 495 ||||||||||||||| || ||||| |||||||| Sbjct: 1303 aagaactggaccaaatatctcctctttgtaaca 1271
>ref|NM_131685.2| Danio rerio ATPase, Na+/K+ transporting, alpha 3b polypeptide (atp1a3b), mRNA Length = 4801 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 339 caatgtctgtctgaaatttcc 359 ||||||||||||||||||||| Sbjct: 537 caatgtctgtctgaaatttcc 517
>gb|AC110564.7| Mus musculus chromosome 12, clone RP23-292A16, complete sequence Length = 211576 Score = 42.1 bits (21), Expect = 2.2 Identities = 30/33 (90%) Strand = Plus / Plus Query: 463 aagaactggaccaaaaatttcctccttgtaaca 495 ||||||||||||||| || ||||| |||||||| Sbjct: 22079 aagaactggaccaaatatctcctctttgtaaca 22111
>gb|AC120402.10| Mus musculus chromosome 12, clone RP24-354N2, complete sequence Length = 122843 Score = 42.1 bits (21), Expect = 2.2 Identities = 30/33 (90%) Strand = Plus / Plus Query: 463 aagaactggaccaaaaatttcctccttgtaaca 495 ||||||||||||||| || ||||| |||||||| Sbjct: 104480 aagaactggaccaaatatctcctctttgtaaca 104512
>emb|BX908756.12| Zebrafish DNA sequence from clone CH211-190D13 in linkage group 1, complete sequence Length = 134952 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 350 tgaaatttccttgctgagaca 370 ||||||||||||||||||||| Sbjct: 126210 tgaaatttccttgctgagaca 126230
>gb|BC031148.1| Mus musculus aldehyde dehydrogenase family 6, subfamily A1, mRNA (cDNA clone MGC:37325 IMAGE:4975560), complete cds Length = 3478 Score = 42.1 bits (21), Expect = 2.2 Identities = 30/33 (90%) Strand = Plus / Minus Query: 463 aagaactggaccaaaaatttcctccttgtaaca 495 ||||||||||||||| || ||||| |||||||| Sbjct: 1405 aagaactggaccaaatatctcctctttgtaaca 1373
>gb|CP000316.1| Polaromonas sp. JS666, complete genome Length = 5200264 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 308 atcggcacgttgatgcccacc 328 ||||||||||||||||||||| Sbjct: 4809482 atcggcacgttgatgcccacc 4809502
>emb|AL137860.22| Human DNA sequence from clone RP4-633N17 on chromosome 1p34.1-34.3 Contains the 3' end of the SLC9A1 gene for solute carrier family 9 (sodium/hydrogen exchanger), isoform 1 (antiporter, Na+/H+, amiloride sensitive) and a CpG island, complete sequence Length = 121010 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 438 ctaggctctctgccttcatca 458 ||||||||||||||||||||| Sbjct: 20843 ctaggctctctgccttcatca 20863
>gb|BC098527.1| Danio rerio ATPase, Na+/K+ transporting, alpha 3b polypeptide, mRNA (cDNA clone MGC:109873 IMAGE:3815587), complete cds Length = 4801 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 339 caatgtctgtctgaaatttcc 359 ||||||||||||||||||||| Sbjct: 537 caatgtctgtctgaaatttcc 517
>emb|CR857453.1| Pongo pygmaeus mRNA; cDNA DKFZp469N105 (from clone DKFZp469N105) Length = 4585 Score = 42.1 bits (21), Expect = 2.2 Identities = 30/33 (90%) Strand = Plus / Minus Query: 463 aagaactggaccaaaaatttcctccttgtaaca 495 |||||| ||||||||||| ||||| |||||||| Sbjct: 1289 aagaaccggaccaaaaatctcctctttgtaaca 1257
>dbj|BA000032.2| Vibrio parahaemolyticus RIMD 2210633 DNA, chromosome 2, complete sequence Length = 1877212 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 274 acccgtgaaggagaagaatgg 294 ||||||||||||||||||||| Sbjct: 627240 acccgtgaaggagaagaatgg 627220
>dbj|AK128924.1| Mus musculus cDNA fis, clone TRACH3001119, highly similar to Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial precursor (EC 1.2.1.27) Length = 3357 Score = 42.1 bits (21), Expect = 2.2 Identities = 30/33 (90%) Strand = Plus / Minus Query: 463 aagaactggaccaaaaatttcctccttgtaaca 495 ||||||||||||||| || ||||| |||||||| Sbjct: 1312 aagaactggaccaaatatctcctctttgtaaca 1280
>dbj|AK147146.1| Mus musculus 17 days embryo kidney cDNA, RIKEN full-length enriched library, clone:I920188E21 product:aldehyde dehydrogenase family 6, subfamily A1, full insert sequence Length = 3395 Score = 42.1 bits (21), Expect = 2.2 Identities = 30/33 (90%) Strand = Plus / Minus Query: 463 aagaactggaccaaaaatttcctccttgtaaca 495 ||||||||||||||| || ||||| |||||||| Sbjct: 1334 aagaactggaccaaatatctcctctttgtaaca 1302
>dbj|AK155814.1| Mus musculus B6-derived CD11 +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F730225O04 product:aldehyde dehydrogenase family 6, subfamily A1, full insert sequence Length = 3373 Score = 42.1 bits (21), Expect = 2.2 Identities = 30/33 (90%) Strand = Plus / Minus Query: 463 aagaactggaccaaaaatttcctccttgtaaca 495 ||||||||||||||| || ||||| |||||||| Sbjct: 1331 aagaactggaccaaatatctcctctttgtaaca 1299
>dbj|AK169915.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630004C22 product:aldehyde dehydrogenase family 6, subfamily A1, full insert sequence Length = 3365 Score = 42.1 bits (21), Expect = 2.2 Identities = 30/33 (90%) Strand = Plus / Minus Query: 463 aagaactggaccaaaaatttcctccttgtaaca 495 ||||||||||||||| || ||||| |||||||| Sbjct: 1320 aagaactggaccaaatatctcctctttgtaaca 1288
>dbj|AK171896.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched library, clone:F830018D16 product:aldehyde dehydrogenase family 6, subfamily A1, full insert sequence Length = 3383 Score = 42.1 bits (21), Expect = 2.2 Identities = 30/33 (90%) Strand = Plus / Minus Query: 463 aagaactggaccaaaaatttcctccttgtaaca 495 ||||||||||||||| || ||||| |||||||| Sbjct: 1323 aagaactggaccaaatatctcctctttgtaaca 1291
>dbj|AK171581.1| Mus musculus B6-derived CD11 +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F730313A18 product:aldehyde dehydrogenase family 6, subfamily A1, full insert sequence Length = 2266 Score = 42.1 bits (21), Expect = 2.2 Identities = 30/33 (90%) Strand = Plus / Minus Query: 463 aagaactggaccaaaaatttcctccttgtaaca 495 ||||||||||||||| || ||||| |||||||| Sbjct: 1334 aagaactggaccaaatatctcctctttgtaaca 1302
>dbj|AK170305.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630044D15 product:aldehyde dehydrogenase family 6, subfamily A1, full insert sequence Length = 2265 Score = 42.1 bits (21), Expect = 2.2 Identities = 30/33 (90%) Strand = Plus / Minus Query: 463 aagaactggaccaaaaatttcctccttgtaaca 495 ||||||||||||||| || ||||| |||||||| Sbjct: 1333 aagaactggaccaaatatctcctctttgtaaca 1301
>gb|AY008374.1| Danio rerio Na+/K+ ATPase alpha subunit isoform 6 (atp1a3b) mRNA, complete cds Length = 3309 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 339 caatgtctgtctgaaatttcc 359 ||||||||||||||||||||| Sbjct: 195 caatgtctgtctgaaatttcc 175
>dbj|AK082790.1| Mus musculus ES cells cDNA, RIKEN full-length enriched library, clone:C330018G24 product:METHYLMALONATE-SEMIALDEHYDE DEHYDROGENASE (EC 1.2.1.27), full insert sequence Length = 3393 Score = 42.1 bits (21), Expect = 2.2 Identities = 30/33 (90%) Strand = Plus / Minus Query: 463 aagaactggaccaaaaatttcctccttgtaaca 495 ||||||||||||||| || ||||| |||||||| Sbjct: 1334 aagaactggaccaaatatctcctctttgtaaca 1302
>dbj|AK033587.1| Mus musculus adult male cecum cDNA, RIKEN full-length enriched library, clone:9130015C07 product:METHYLMALONATE-SEMIALDEHYDE DEHYDROGENASE (EC 1.2.1.27) homolog [Mus musculus], full insert sequence Length = 3258 Score = 42.1 bits (21), Expect = 2.2 Identities = 30/33 (90%) Strand = Plus / Minus Query: 463 aagaactggaccaaaaatttcctccttgtaaca 495 ||||||||||||||| || ||||| |||||||| Sbjct: 1307 aagaactggaccaaatatctcctctttgtaaca 1275
>gb|AF297860.1|AF297860 Mus musculus methylmalonate-semialdehyde dehydrogenase mRNA, complete cds Length = 3357 Score = 42.1 bits (21), Expect = 2.2 Identities = 30/33 (90%) Strand = Plus / Minus Query: 463 aagaactggaccaaaaatttcctccttgtaaca 495 ||||||||||||||| || ||||| |||||||| Sbjct: 1280 aagaactggaccaaatatctcctctttgtaaca 1248
>gb|AC117457.11| Homo sapiens 3 BAC RP11-385J1 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 204899 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 283 ggagaagaatggtaggggtactggg 307 |||||||||||| |||||||||||| Sbjct: 16937 ggagaagaatggcaggggtactggg 16913
>gb|AF269901.1|AF269901 Staphylococcus epidermidis strain SR1 clone step.1029g12 genomic sequence Length = 3180 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 463 aagaactggaccaaaaatttc 483 ||||||||||||||||||||| Sbjct: 790 aagaactggaccaaaaatttc 770
>dbj|AK219229.1| Mus musculus cDNA, clone:Y2G0147M22, strand:minus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000054045, based on BLAT search Length = 259 Score = 42.1 bits (21), Expect = 2.2 Identities = 30/33 (90%) Strand = Plus / Minus Query: 463 aagaactggaccaaaaatttcctccttgtaaca 495 ||||||||||||||| || ||||| |||||||| Sbjct: 155 aagaactggaccaaatatctcctctttgtaaca 123
>dbj|AK215618.1| Mus musculus cDNA, clone:Y2G0135K01, strand:plus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000054045, based on BLAT search Length = 255 Score = 42.1 bits (21), Expect = 2.2 Identities = 30/33 (90%) Strand = Plus / Minus Query: 463 aagaactggaccaaaaatttcctccttgtaaca 495 ||||||||||||||| || ||||| |||||||| Sbjct: 151 aagaactggaccaaatatctcctctttgtaaca 119
>dbj|AK205140.1| Mus musculus cDNA, clone:Y1G0150M07, strand:minus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000054045, based on BLAT search Length = 379 Score = 42.1 bits (21), Expect = 2.2 Identities = 30/33 (90%) Strand = Plus / Minus Query: 463 aagaactggaccaaaaatttcctccttgtaaca 495 ||||||||||||||| || ||||| |||||||| Sbjct: 275 aagaactggaccaaatatctcctctttgtaaca 243
>dbj|AP004309.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0560B08 Length = 128098 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 81 aaattccacatcaaatatgtc 101 ||||||||||||||||||||| Sbjct: 74747 aaattccacatcaaatatgtc 74767
>gb|CP000029.1| Staphylococcus epidermidis RP62A, complete genome Length = 2616530 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 463 aagaactggaccaaaaatttc 483 ||||||||||||||||||||| Sbjct: 2107744 aagaactggaccaaaaatttc 2107724
>gb|AE015929.1| Staphylococcus epidermidis ATCC 12228, complete genome Length = 2499279 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 463 aagaactggaccaaaaatttc 483 ||||||||||||||||||||| Sbjct: 2112988 aagaactggaccaaaaatttc 2112968
>ref|NM_134042.1| Mus musculus aldehyde dehydrogenase family 6, subfamily A1 (Aldh6a1), mRNA Length = 3357 Score = 42.1 bits (21), Expect = 2.2 Identities = 30/33 (90%) Strand = Plus / Minus Query: 463 aagaactggaccaaaaatttcctccttgtaaca 495 ||||||||||||||| || ||||| |||||||| Sbjct: 1280 aagaactggaccaaatatctcctctttgtaaca 1248
>dbj|AB062885.1| Carassius auratus mRNA for Na,K-ATPase alpha subunit 3, complete cds Length = 4543 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 339 caatgtctgtctgaaatttcc 359 ||||||||||||||||||||| Sbjct: 322 caatgtctgtctgaaatttcc 302
>emb|AL732463.7| Mouse DNA sequence from clone RP23-216N18 on chromosome X, complete sequence Length = 158239 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 75 aagcttaaattccacatcaaa 95 ||||||||||||||||||||| Sbjct: 10613 aagcttaaattccacatcaaa 10633
>gb|AC149290.1| Solanum demissum chromosome 5 clone PGEC093P17 map MAP_LOC, complete sequence Length = 200238 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 494 cactccatatcacttttaacatca 517 |||| ||||||||||||||||||| Sbjct: 79647 cactacatatcacttttaacatca 79670
>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome Length = 3345170 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 305 gggatcggcacgttgatgcc 324 |||||||||||||||||||| Sbjct: 3201737 gggatcggcacgttgatgcc 3201718
>gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete genome Length = 6093698 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 305 gggatcggcacgttgatgcc 324 |||||||||||||||||||| Sbjct: 3917566 gggatcggcacgttgatgcc 3917585
>emb|Z70686.1|CER10H10 Caenorhabditis elegans Cosmid R10H10, complete sequence Length = 35056 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 338 tcaatgtctgtctgaaattt 357 |||||||||||||||||||| Sbjct: 11272 tcaatgtctgtctgaaattt 11253
>emb|CR728121.2|CNS0GORJ Tetraodon nigroviridis full-length cDNA Length = 1618 Score = 40.1 bits (20), Expect = 8.7 Identities = 32/36 (88%) Strand = Plus / Minus Query: 194 gtgatggtcttgatctgggtgaagaactgcacgccc 229 |||| ||| |||||||||||| ||||||| |||||| Sbjct: 1468 gtgacggttttgatctgggtgtagaactggacgccc 1433
>emb|CR724772.2|CNS0GM6I Tetraodon nigroviridis full-length cDNA Length = 1685 Score = 40.1 bits (20), Expect = 8.7 Identities = 32/36 (88%) Strand = Plus / Minus Query: 194 gtgatggtcttgatctgggtgaagaactgcacgccc 229 |||| ||| |||||||||||| ||||||| |||||| Sbjct: 1535 gtgacggttttgatctgggtgtagaactggacgccc 1500
>gb|AC006332.3| Homo sapiens BAC clone RP11-376O14 from 7, complete sequence Length = 153477 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 79 ttaaattccacatcaaatat 98 |||||||||||||||||||| Sbjct: 3666 ttaaattccacatcaaatat 3647
>emb|CR655188.2|CNS0F4II Tetraodon nigroviridis full-length cDNA Length = 1656 Score = 40.1 bits (20), Expect = 8.7 Identities = 32/36 (88%) Strand = Plus / Minus Query: 194 gtgatggtcttgatctgggtgaagaactgcacgccc 229 |||| ||| |||||||||||| ||||||| |||||| Sbjct: 1515 gtgacggttttgatctgggtgtagaactggacgccc 1480
>emb|CR650400.2|CNS0F0TI Tetraodon nigroviridis full-length cDNA Length = 1559 Score = 40.1 bits (20), Expect = 8.7 Identities = 32/36 (88%) Strand = Plus / Minus Query: 194 gtgatggtcttgatctgggtgaagaactgcacgccc 229 |||| ||| |||||||||||| ||||||| |||||| Sbjct: 1408 gtgacggttttgatctgggtgtagaactggacgccc 1373
>emb|CR646713.2|CNS0EXZ3 Tetraodon nigroviridis full-length cDNA Length = 630 Score = 40.1 bits (20), Expect = 8.7 Identities = 32/36 (88%) Strand = Plus / Minus Query: 194 gtgatggtcttgatctgggtgaagaactgcacgccc 229 |||| ||| |||||||||||| ||||||| |||||| Sbjct: 479 gtgacggttttgatctgggtgtagaactggacgccc 444
>emb|CR636821.2|CNS0EQCB Tetraodon nigroviridis full-length cDNA Length = 1573 Score = 40.1 bits (20), Expect = 8.7 Identities = 32/36 (88%) Strand = Plus / Minus Query: 194 gtgatggtcttgatctgggtgaagaactgcacgccc 229 |||| ||| |||||||||||| ||||||| |||||| Sbjct: 1422 gtgacggttttgatctgggtgtagaactggacgccc 1387
>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome Length = 4406967 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 305 gggatcggcacgttgatgcc 324 |||||||||||||||||||| Sbjct: 2820742 gggatcggcacgttgatgcc 2820761
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 305 gggatcggcacgttgatgcc 324 |||||||||||||||||||| Sbjct: 3656919 gggatcggcacgttgatgcc 3656938
>gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete sequence Length = 2726152 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 305 gggatcggcacgttgatgcc 324 |||||||||||||||||||| Sbjct: 2658135 gggatcggcacgttgatgcc 2658154
>gb|AC044849.12| Homo sapiens chromosome 8, clone RP11-489E7, complete sequence Length = 149301 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 445 ctctgccttcatcaagagaagaac 468 |||||||||||||| ||||||||| Sbjct: 5752 ctctgccttcatcatgagaagaac 5775
>emb|CR628336.1| Legionella pneumophila str. Paris complete genome Length = 3503610 Score = 40.1 bits (20), Expect = 8.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 462 gaagaactggaccaaaaatttcctcctt 489 ||||||| || ||||||||||||||||| Sbjct: 1493336 gaagaacagggccaaaaatttcctcctt 1493309
>emb|BX572604.1| Rhodopseudomonas palustris CGA009 complete genome; segment 12/16 Length = 348068 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 305 gggatcggcacgttgatgcc 324 |||||||||||||||||||| Sbjct: 52868 gggatcggcacgttgatgcc 52887
>emb|AL133522.1|SPAC922 S.pombe chromosome I cosmid c922 Length = 19999 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 466 aactggaccaaaaatttcctcctt 489 |||||| ||||||||||||||||| Sbjct: 16745 aactggtccaaaaatttcctcctt 16768
>gb|AE005897.1| Caulobacter crescentus CB15 section 223 of 359 of the complete genome Length = 9736 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 305 gggatcggcacgttgatgcc 324 |||||||||||||||||||| Sbjct: 8345 gggatcggcacgttgatgcc 8364
>gb|AC182634.3| Gallus gallus BAC clone CH261-141O9 from chromosome 1, complete sequence Length = 187635 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 452 ttcatcaagagaagaactgg 471 |||||||||||||||||||| Sbjct: 108582 ttcatcaagagaagaactgg 108601
>gb|AC025444.6| Homo sapiens chromosome 5 clone CTD-2045B17, complete sequence Length = 26137 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 436 atctaggctctctgccttca 455 |||||||||||||||||||| Sbjct: 15246 atctaggctctctgccttca 15227
>gb|AC116333.2| Homo sapiens chromosome 5 clone CTD-2242E19, complete sequence Length = 112119 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 436 atctaggctctctgccttca 455 |||||||||||||||||||| Sbjct: 62182 atctaggctctctgccttca 62201
>gb|AC093916.2| Homo sapiens BAC clone RP11-789C2 from 4, complete sequence Length = 162632 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 608 acaccactttggactaactt 627 |||||||||||||||||||| Sbjct: 60862 acaccactttggactaactt 60843
>gb|AC064800.8| Homo sapiens chromosome 18, clone CTD-2001I24, complete sequence Length = 131409 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 570 tctccctcccatccagcacaatcc 593 ||||||||||||||| |||||||| Sbjct: 108692 tctccctcccatccatcacaatcc 108669
>gb|AC091165.15| Homo sapiens chromosome 8, clone RP11-366G13, complete sequence Length = 188456 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 445 ctctgccttcatcaagagaagaac 468 |||||||||||||| ||||||||| Sbjct: 57953 ctctgccttcatcatgagaagaac 57930
>gb|CP000264.1| Jannaschia sp. CCS1, complete genome Length = 4317977 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 305 gggatcggcacgttgatgcc 324 |||||||||||||||||||| Sbjct: 1902234 gggatcggcacgttgatgcc 1902253
>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome Length = 3561584 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 305 gggatcggcacgttgatgcc 324 |||||||||||||||||||| Sbjct: 907241 gggatcggcacgttgatgcc 907222
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 305 gggatcggcacgttgatgcc 324 |||||||||||||||||||| Sbjct: 2397145 gggatcggcacgttgatgcc 2397126
>gb|AC093048.1| Drosophila melanogaster, chromosome 2L, region 36D-36E, BAC clone BACR39D12, complete sequence Length = 184021 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 406 cttgtttctgttcacaattt 425 |||||||||||||||||||| Sbjct: 25114 cttgtttctgttcacaattt 25095
>ref|NM_001020438.1| Schizosaccharomyces pombe 972h- hypothetical protein (SPAC922.07c), partial mRNA Length = 1491 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 466 aactggaccaaaaatttcctcctt 489 |||||| ||||||||||||||||| Sbjct: 1203 aactggtccaaaaatttcctcctt 1180
>gb|BC102043.1| Bos taurus CDC37 homolog, mRNA (cDNA clone MGC:127139 IMAGE:7944436), complete cds Length = 1603 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 200 gtcttgatctgggtgaagaactgc 223 |||||||||| ||||||||||||| Sbjct: 799 gtcttgatcttggtgaagaactgc 776
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 305 gggatcggcacgttgatgcc 324 |||||||||||||||||||| Sbjct: 2409918 gggatcggcacgttgatgcc 2409899
>gb|AC131254.5| Homo sapiens chromosome 8, clone RP11-94H18, complete sequence Length = 153000 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 445 ctctgccttcatcaagagaagaac 468 |||||||||||||| ||||||||| Sbjct: 150200 ctctgccttcatcatgagaagaac 150223
>gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome Length = 3052398 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 305 gggatcggcacgttgatgcc 324 |||||||||||||||||||| Sbjct: 2030983 gggatcggcacgttgatgcc 2030964
>emb|BX322536.4| Zebrafish DNA sequence from clone DKEY-174K12 in linkage group 5, complete sequence Length = 93492 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 571 ctccctcccatccagcacaa 590 |||||||||||||||||||| Sbjct: 40639 ctccctcccatccagcacaa 40620
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 305 gggatcggcacgttgatgcc 324 |||||||||||||||||||| Sbjct: 4388996 gggatcggcacgttgatgcc 4388977
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 305 gggatcggcacgttgatgcc 324 |||||||||||||||||||| Sbjct: 1145290 gggatcggcacgttgatgcc 1145271
>dbj|AP006841.1| Bacteroides fragilis YCH46 DNA, complete genome Length = 5277274 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 231 ccttgccgtagaaattcaag 250 |||||||||||||||||||| Sbjct: 3280894 ccttgccgtagaaattcaag 3280913
>emb|BX322604.9| Zebrafish DNA sequence from clone DKEY-10N19 in linkage group 5, complete sequence Length = 175983 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 571 ctccctcccatccagcacaa 590 |||||||||||||||||||| Sbjct: 6987 ctccctcccatccagcacaa 7006
>gb|BT021794.1| Bos taurus CDC37 cell division cycle 37 homolog (S. cerevisiae) (CDC37), mRNA, complete cds Length = 1630 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 200 gtcttgatctgggtgaagaactgc 223 |||||||||| ||||||||||||| Sbjct: 821 gtcttgatcttggtgaagaactgc 798
>emb|AL646053.1| Ralstonia solanacearum GMI1000 megaplasmid complete sequence Length = 2094509 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 305 gggatcggcacgttgatgcc 324 |||||||||||||||||||| Sbjct: 1335772 gggatcggcacgttgatgcc 1335791
>gb|AC011662.1|AC011662 Drosophila melanogaster, chromosome 2L, region 36D-, BAC clones BACR01G10 and BACR05I08, complete sequence Length = 294942 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 406 cttgtttctgttcacaattt 425 |||||||||||||||||||| Sbjct: 286844 cttgtttctgttcacaattt 286825
>gb|BT020643.1| Bos taurus CDC37 cell division cycle 37 homolog (S. cerevisiae) (CDC37), mRNA, complete cds Length = 1576 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 200 gtcttgatctgggtgaagaactgc 223 |||||||||| ||||||||||||| Sbjct: 788 gtcttgatcttggtgaagaactgc 765
>gb|AE003657.3| Drosophila melanogaster chromosome 2L, section 66 of 83 of the complete sequence Length = 265254 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 406 cttgtttctgttcacaattt 425 |||||||||||||||||||| Sbjct: 198226 cttgtttctgttcacaattt 198207
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 305 gggatcggcacgttgatgcc 324 |||||||||||||||||||| Sbjct: 3796946 gggatcggcacgttgatgcc 3796965
>gb|AC005444.1|AC005444 Drosophila melanogaster, chromosome 2R, region 36D3-36D3, P1 clone DS06379, complete sequence Length = 77685 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 406 cttgtttctgttcacaattt 425 |||||||||||||||||||| Sbjct: 25523 cttgtttctgttcacaattt 25504
>emb|AL844145.9| Mouse DNA sequence from clone RP23-403F4 on chromosome 2, complete sequence Length = 173053 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 tcaaatatgtccacatacat 110 |||||||||||||||||||| Sbjct: 14440 tcaaatatgtccacatacat 14421
>ref|NM_001035338.1| Bos taurus CDC37 homolog (CDC37), mRNA Length = 1603 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 200 gtcttgatctgggtgaagaactgc 223 |||||||||| ||||||||||||| Sbjct: 799 gtcttgatcttggtgaagaactgc 776 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,771,710 Number of Sequences: 3902068 Number of extensions: 5771710 Number of successful extensions: 136366 Number of sequences better than 10.0: 142 Number of HSP's better than 10.0 without gapping: 143 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 135331 Number of HSP's gapped (non-prelim): 1026 length of query: 635 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 612 effective length of database: 17,143,297,704 effective search space: 10491698194848 effective search space used: 10491698194848 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)