ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbah61m07
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_469567.1| Oryza sativa (japonica cultivar-group), mRNA 240 4e-60
2gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 240 4e-60
3dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 240 4e-60
4gb|AC091532.13| Oryza sativa chromosome 3 BAC OSJNBa0078A17 geno... 240 4e-60
5dbj|AK099485.1| Oryza sativa (japonica cultivar-group) cDNA clon... 240 4e-60
6dbj|AK060573.1| Oryza sativa (japonica cultivar-group) cDNA clon... 240 4e-60
7gb|AY596537.1| Saccharum officinarum clone SCJFLR1035G06, comple... 210 3e-51
8gb|AY108217.1| Zea mays PCO091909 mRNA sequence 170 3e-39
9gb|BT014021.1| Lycopersicon esculentum clone 133083F, mRNA sequence 56 1e-04
10gb|AY105683.1| Zea mays PCO091907 mRNA sequence 52 0.002
11gb|AC161034.23| Medicago truncatula clone mth2-53o24, complete s... 50 0.007
12dbj|AP006699.1| Lotus japonicus genomic DNA, chromosome 2, clone... 50 0.007
13ref|NM_112660.3| Arabidopsis thaliana ATACP5; protein serine/thr... 48 0.028
14ref|NM_112661.2| Arabidopsis thaliana unknown protein AT3G17800 ... 48 0.028
15gb|AY099554.1| Arabidopsis thaliana unknown protein (At3g17800) ... 48 0.028
16gb|AY093276.1| Arabidopsis thaliana unknown protein (At3g17800) ... 48 0.028
17gb|AY062486.1| Arabidopsis thaliana Unknown protein (At3g17800; ... 48 0.028
18dbj|AK221063.1| Arabidopsis thaliana mRNA for hypothetical prote... 48 0.028
19gb|AF346660.1|AF346660 Brassica napus unknown mRNA 48 0.028
20emb|BX823872.1|CNS0A7BB Arabidopsis thaliana Full-length cDNA Co... 48 0.028
21gb|AY089008.1| Arabidopsis thaliana clone 15577 mRNA, complete s... 48 0.028
22dbj|AB019230.1| Arabidopsis thaliana genomic DNA, chromosome 3, ... 48 0.028
23emb|AJ243527.1|ATH243527 Arabidopsis thaliana acp5 gene for acid... 48 0.028
24gb|AC101982.9| Mus musculus chromosome 3, clone RP24-346F13, com... 44 0.44
25ref|XM_661812.1| Cryptosporidium hominis TU502 chain S, Cryo-Em ... 44 0.44
26ref|XM_626482.1| Cryptosporidium parvum Iowa II pleckstrin homol... 44 0.44
27gb|AE006144.1| Pasteurella multocida subsp. multocida str. Pm70 ... 42 1.7
28gb|AC146856.8| Medicago truncatula clone mth2-16l23, complete se... 42 1.7
29gb|AY108199.1| Zea mays PCO076094 mRNA sequence 42 1.7
30gb|AC109268.10| Mus musculus chromosome 1, clone RP23-305F24, co... 40 6.9
31gb|AC165245.2| Mus musculus BAC clone RP24-376N22 from chromosom... 40 6.9
32gb|AC150389.2| Branchiostoma floridae clone CH302-114C5, complet... 40 6.9
33gb|CP000061.1| Aster yellows witches'-broom phytoplasma AYWB, co... 40 6.9
34gb|AC121889.3| Mus musculus BAC clone RP24-146D9 from chromosome... 40 6.9
35emb|AL451141.13| Human DNA sequence from clone RP11-265E5 on chr... 40 6.9
36emb|AL356454.15| Human DNA sequence from clone RP11-458J24 on ch... 40 6.9
37gb|AC137843.15| Mus musculus chromosome 9, clone RP23-413J12, co... 40 6.9
38gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome 40 6.9
39gb|AC068765.16| Homo sapiens 3 BAC RP11-115H18 (Roswell Park Can... 40 6.9
40gb|AC055732.16| Homo sapiens 3 BAC RP11-39E4 (Roswell Park Cance... 40 6.9
41dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.9
42dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.9
43dbj|AP003312.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.9
44dbj|AP004645.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.9
45dbj|AP004459.2| Oryza sativa (japonica cultivar-group) genomic D... 40 6.9
46emb|AL358832.3|CNS05TED Human chromosome 14 DNA sequence BAC R-7... 40 6.9
47emb|CT009732.8| Mouse DNA sequence from clone RP23-72O20 on chro... 40 6.9
48emb|AL928909.7| Mouse DNA sequence from clone RP23-320I18 on chr... 40 6.9 
>ref|XM_469567.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1681

 Score =  240 bits (121), Expect = 4e-60
 Identities = 196/221 (88%)
 Strand = Plus / Minus

                                                                        
Query: 285  tagttggtgacaaaatggtacctggagtccacatagctctcgacatcccagaggaaggat 344
            |||||||  |||||||||||||||| ||||||| ||||||| |||||||| |||||||||
Sbjct: 1305 tagttggccacaaaatggtacctggtgtccacaaagctctcaacatcccaaaggaaggat 1246

                                                                        
Query: 345  ccgaatgtgacagcctctaagatcagccttctcaacccggagaagcttatcctgacatac 404
            || || || ||||||||||||||||||||||||||||| | ||| |||||||||||||  
Sbjct: 1245 ccaaaagtaacagcctctaagatcagccttctcaaccctgcgaaacttatcctgacatgt 1186

                                                                        
Query: 405  tcatccttggaagaatccactgttccttccggggtgatcacaatctctggtttcccgaat 464
            ||||||||||||||||| ||||| ||||| || ||||| |||||||||||||| || |||
Sbjct: 1185 tcatccttggaagaatcgactgtgccttcaggtgtgattacaatctctggtttaccaaat 1126

                                                     
Query: 465  agcgcctctgtgtgcttctcgatgatgccaaacgccacctt 505
            || ||||| ||||||||||||||||||||||| ||| ||||
Sbjct: 1125 agtgcctcagtgtgcttctcgatgatgccaaatgcctcctt 1085
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  240 bits (121), Expect = 4e-60
 Identities = 196/221 (88%)
 Strand = Plus / Minus

                                                                            
Query: 285      tagttggtgacaaaatggtacctggagtccacatagctctcgacatcccagaggaaggat 344
                |||||||  |||||||||||||||| ||||||| ||||||| |||||||| |||||||||
Sbjct: 28772332 tagttggccacaaaatggtacctggtgtccacaaagctctcaacatcccaaaggaaggat 28772273

                                                                            
Query: 345      ccgaatgtgacagcctctaagatcagccttctcaacccggagaagcttatcctgacatac 404
                || || || ||||||||||||||||||||||||||||| | ||| |||||||||||||  
Sbjct: 28772272 ccaaaagtaacagcctctaagatcagccttctcaaccctgcgaaacttatcctgacatgt 28772213

                                                                            
Query: 405      tcatccttggaagaatccactgttccttccggggtgatcacaatctctggtttcccgaat 464
                ||||||||||||||||| ||||| ||||| || ||||| |||||||||||||| || |||
Sbjct: 28772212 tcatccttggaagaatcgactgtgccttcaggtgtgattacaatctctggtttaccaaat 28772153

                                                         
Query: 465      agcgcctctgtgtgcttctcgatgatgccaaacgccacctt 505
                || ||||| ||||||||||||||||||||||| ||| ||||
Sbjct: 28772152 agtgcctcagtgtgcttctcgatgatgccaaatgcctcctt 28772112
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  240 bits (121), Expect = 4e-60
 Identities = 196/221 (88%)
 Strand = Plus / Minus

                                                                            
Query: 285      tagttggtgacaaaatggtacctggagtccacatagctctcgacatcccagaggaaggat 344
                |||||||  |||||||||||||||| ||||||| ||||||| |||||||| |||||||||
Sbjct: 28863656 tagttggccacaaaatggtacctggtgtccacaaagctctcaacatcccaaaggaaggat 28863597

                                                                            
Query: 345      ccgaatgtgacagcctctaagatcagccttctcaacccggagaagcttatcctgacatac 404
                || || || ||||||||||||||||||||||||||||| | ||| |||||||||||||  
Sbjct: 28863596 ccaaaagtaacagcctctaagatcagccttctcaaccctgcgaaacttatcctgacatgt 28863537

                                                                            
Query: 405      tcatccttggaagaatccactgttccttccggggtgatcacaatctctggtttcccgaat 464
                ||||||||||||||||| ||||| ||||| || ||||| |||||||||||||| || |||
Sbjct: 28863536 tcatccttggaagaatcgactgtgccttcaggtgtgattacaatctctggtttaccaaat 28863477

                                                         
Query: 465      agcgcctctgtgtgcttctcgatgatgccaaacgccacctt 505
                || ||||| ||||||||||||||||||||||| ||| ||||
Sbjct: 28863476 agtgcctcagtgtgcttctcgatgatgccaaatgcctcctt 28863436
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>gb|AC091532.13| Oryza sativa chromosome 3 BAC OSJNBa0078A17 genomic sequence, complete
             sequence
          Length = 147344

 Score =  240 bits (121), Expect = 4e-60
 Identities = 196/221 (88%)
 Strand = Plus / Minus

                                                                         
Query: 285   tagttggtgacaaaatggtacctggagtccacatagctctcgacatcccagaggaaggat 344
             |||||||  |||||||||||||||| ||||||| ||||||| |||||||| |||||||||
Sbjct: 79313 tagttggccacaaaatggtacctggtgtccacaaagctctcaacatcccaaaggaaggat 79254

                                                                         
Query: 345   ccgaatgtgacagcctctaagatcagccttctcaacccggagaagcttatcctgacatac 404
             || || || ||||||||||||||||||||||||||||| | ||| |||||||||||||  
Sbjct: 79253 ccaaaagtaacagcctctaagatcagccttctcaaccctgcgaaacttatcctgacatgt 79194

                                                                         
Query: 405   tcatccttggaagaatccactgttccttccggggtgatcacaatctctggtttcccgaat 464
             ||||||||||||||||| ||||| ||||| || ||||| |||||||||||||| || |||
Sbjct: 79193 tcatccttggaagaatcgactgtgccttcaggtgtgattacaatctctggtttaccaaat 79134

                                                      
Query: 465   agcgcctctgtgtgcttctcgatgatgccaaacgccacctt 505
             || ||||| ||||||||||||||||||||||| ||| ||||
Sbjct: 79133 agtgcctcagtgtgcttctcgatgatgccaaatgcctcctt 79093
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>dbj|AK099485.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013026C05, full
            insert sequence
          Length = 1712

 Score =  240 bits (121), Expect = 4e-60
 Identities = 196/221 (88%)
 Strand = Plus / Minus

                                                                        
Query: 285  tagttggtgacaaaatggtacctggagtccacatagctctcgacatcccagaggaaggat 344
            |||||||  |||||||||||||||| ||||||| ||||||| |||||||| |||||||||
Sbjct: 1417 tagttggccacaaaatggtacctggtgtccacaaagctctcaacatcccaaaggaaggat 1358

                                                                        
Query: 345  ccgaatgtgacagcctctaagatcagccttctcaacccggagaagcttatcctgacatac 404
            || || || ||||||||||||||||||||||||||||| | ||| |||||||||||||  
Sbjct: 1357 ccaaaagtaacagcctctaagatcagccttctcaaccctgcgaaacttatcctgacatgt 1298

                                                                        
Query: 405  tcatccttggaagaatccactgttccttccggggtgatcacaatctctggtttcccgaat 464
            ||||||||||||||||| ||||| ||||| || ||||| |||||||||||||| || |||
Sbjct: 1297 tcatccttggaagaatcgactgtgccttcaggtgtgattacaatctctggtttaccaaat 1238

                                                     
Query: 465  agcgcctctgtgtgcttctcgatgatgccaaacgccacctt 505
            || ||||| ||||||||||||||||||||||| ||| ||||
Sbjct: 1237 agtgcctcagtgtgcttctcgatgatgccaaatgcctcctt 1197
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>dbj|AK060573.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-023-C09, full
            insert sequence
          Length = 1392

 Score =  240 bits (121), Expect = 4e-60
 Identities = 196/221 (88%)
 Strand = Plus / Minus

                                                                        
Query: 285  tagttggtgacaaaatggtacctggagtccacatagctctcgacatcccagaggaaggat 344
            |||||||  |||||||||||||||| ||||||| ||||||| |||||||| |||||||||
Sbjct: 1079 tagttggccacaaaatggtacctggtgtccacaaagctctcaacatcccaaaggaaggat 1020

                                                                        
Query: 345  ccgaatgtgacagcctctaagatcagccttctcaacccggagaagcttatcctgacatac 404
            || || || ||||||||||||||||||||||||||||| | ||| |||||||||||||  
Sbjct: 1019 ccaaaagtaacagcctctaagatcagccttctcaaccctgcgaaacttatcctgacatgt 960

                                                                        
Query: 405  tcatccttggaagaatccactgttccttccggggtgatcacaatctctggtttcccgaat 464
            ||||||||||||||||| ||||| ||||| || ||||| |||||||||||||| || |||
Sbjct: 959  tcatccttggaagaatcgactgtgccttcaggtgtgattacaatctctggtttaccaaat 900

                                                     
Query: 465  agcgcctctgtgtgcttctcgatgatgccaaacgccacctt 505
            || ||||| ||||||||||||||||||||||| ||| ||||
Sbjct: 899  agtgcctcagtgtgcttctcgatgatgccaaatgcctcctt 859
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>gb|AY596537.1| Saccharum officinarum clone SCJFLR1035G06, complete sequence
          Length = 1879

 Score =  210 bits (106), Expect = 3e-51
 Identities = 193/222 (86%)
 Strand = Plus / Minus

                                                                        
Query: 284  ttagttggtgacaaaatggtacctggagtccacatagctctcgacatcccagaggaagga 343
            ||||||||| || |||||||||||||| |||||| ||||||| || ||||||||||| ||
Sbjct: 1402 ttagttggtcacgaaatggtacctggaatccacaaagctctcaacgtcccagaggaacga 1343

                                                                        
Query: 344  tccgaatgtgacagcctctaagatcagccttctcaacccggagaagcttatcctgacata 403
            |||||| || |||||||| | |||||||||||||| |||||  |||||||| || | || 
Sbjct: 1342 tccgaaagtaacagcctccaggatcagccttctcagcccggcaaagcttattctaatatg 1283

                                                                        
Query: 404  ctcatccttggaagaatccactgttccttccggggtgatcacaatctctggtttcccgaa 463
            |||||||||||||||||| ||||| ||||| || ||||| ||||||||||||||||| ||
Sbjct: 1282 ctcatccttggaagaatcaactgtgccttcaggtgtgattacaatctctggtttcccaaa 1223

                                                      
Query: 464  tagcgcctctgtgtgcttctcgatgatgccaaacgccacctt 505
            |||||| || ||||||||||| ||||||||||| ||| ||||
Sbjct: 1222 tagcgcttcagtgtgcttctcaatgatgccaaaggcctcctt 1181
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>gb|AY108217.1| Zea mays PCO091909 mRNA sequence
          Length = 1565

 Score =  170 bits (86), Expect = 3e-39
 Identities = 179/210 (85%)
 Strand = Plus / Minus

                                                                        
Query: 284  ttagttggtgacaaaatggtacctggagtccacatagctctcgacatcccagaggaagga 343
            |||| |||| || |||||||||| ||| |||||| ||||||| || ||||||||||| ||
Sbjct: 1338 ttagctggtcacgaaatggtaccgggaatccacaaagctctcaacgtcccagaggaacga 1279

                                                                        
Query: 344  tccgaatgtgacagcctctaagatcagccttctcaacccggagaagcttatcctgacata 403
            |||||| || |||||||| | |||||||||||||| ||| |  ||||||||||| | || 
Sbjct: 1278 tccgaaggtaacagcctccaggatcagccttctcagcccagcaaagcttatcctaatatg 1219

                                                                        
Query: 404  ctcatccttggaagaatccactgttccttccggggtgatcacaatctctggtttcccgaa 463
            |||||||||||||||||| |  || ||||| || ||||||||||||||||| ||||| ||
Sbjct: 1218 ctcatccttggaagaatcaagggtgccttcaggtgtgatcacaatctctggcttcccaaa 1159

                                          
Query: 464  tagcgcctctgtgtgcttctcgatgatgcc 493
            |||||| || ||||||||||| ||||||||
Sbjct: 1158 tagcgcttccgtgtgcttctcaatgatgcc 1129
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>gb|BT014021.1| Lycopersicon esculentum clone 133083F, mRNA sequence
          Length = 1591

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 58/68 (85%)
 Strand = Plus / Minus

                                                                        
Query: 294  acaaaatggtacctggagtccacatagctctcgacatcccagaggaaggatccgaatgtg 353
            ||||||||||| || ||||| ||||| ||||| |||||||||||||| || || || || 
Sbjct: 1392 acaaaatggtatcttgagtcgacataactctcaacatcccagaggaaagacccaaaagtt 1333

                    
Query: 354  acagcctc 361
            ||||||||
Sbjct: 1332 acagcctc 1325
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>gb|AY105683.1| Zea mays PCO091907 mRNA sequence
          Length = 913

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 48/54 (88%), Gaps = 1/54 (1%)
 Strand = Plus / Minus

                                                                 
Query: 444 acaatctctggtttcccgaa-tagcgcctctgtgtgcttctcgatgatgccaaa 496
           |||||||||| |||||| || |||||| |||||||| ||||||||||| |||||
Sbjct: 806 acaatctctgctttcccaaaatagcgcttctgtgtgtttctcgatgataccaaa 753
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>gb|AC161034.23| Medicago truncatula clone mth2-53o24, complete sequence
          Length = 128806

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 34/37 (91%)
 Strand = Plus / Plus

                                                  
Query: 301   ggtacctggagtccacatagctctcgacatcccagag 337
             ||||||| |||||||| |||||||| |||||||||||
Sbjct: 23693 ggtacctcgagtccacgtagctctcaacatcccagag 23729
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>dbj|AP006699.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT01N23, TM0490,
             complete sequence
          Length = 110636

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 37/41 (90%)
 Strand = Plus / Plus

                                                      
Query: 297   aaatggtacctggagtccacatagctctcgacatcccagag 337
             ||||||||||| ||||| || |||||||| |||||||||||
Sbjct: 93145 aaatggtaccttgagtcaacgtagctctctacatcccagag 93185
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>ref|NM_112660.3| Arabidopsis thaliana ATACP5; protein serine/threonine phosphatase
            AT3G17790 (ATACP5) mRNA, complete cds
          Length = 2179

 Score = 48.1 bits (24), Expect = 0.028
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                        
Query: 468  gcctctgtgtgcttctcgatgatgccaa 495
            ||||||||||||||||||||||| ||||
Sbjct: 1618 gcctctgtgtgcttctcgatgattccaa 1645
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>ref|NM_112661.2| Arabidopsis thaliana unknown protein AT3G17800 mRNA, complete cds
          Length = 2331

 Score = 48.1 bits (24), Expect = 0.028
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                        
Query: 468  gcctctgtgtgcttctcgatgatgccaa 495
            ||||||||||||||||||||||| ||||
Sbjct: 1360 gcctctgtgtgcttctcgatgattccaa 1333
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>gb|AY099554.1| Arabidopsis thaliana unknown protein (At3g17800) mRNA, complete cds
          Length = 1529

 Score = 48.1 bits (24), Expect = 0.028
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                        
Query: 468  gcctctgtgtgcttctcgatgatgccaa 495
            ||||||||||||||||||||||| ||||
Sbjct: 1235 gcctctgtgtgcttctcgatgattccaa 1208
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>gb|AY093276.1| Arabidopsis thaliana unknown protein (At3g17800) mRNA, complete cds
          Length = 1326

 Score = 48.1 bits (24), Expect = 0.028
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                        
Query: 468  gcctctgtgtgcttctcgatgatgccaa 495
            ||||||||||||||||||||||| ||||
Sbjct: 1082 gcctctgtgtgcttctcgatgattccaa 1055
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>gb|AY062486.1| Arabidopsis thaliana Unknown protein (At3g17800; MEB5.2) mRNA,
            complete cds
          Length = 1509

 Score = 48.1 bits (24), Expect = 0.028
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                        
Query: 468  gcctctgtgtgcttctcgatgatgccaa 495
            ||||||||||||||||||||||| ||||
Sbjct: 1235 gcctctgtgtgcttctcgatgattccaa 1208
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>dbj|AK221063.1| Arabidopsis thaliana mRNA for hypothetical protein, complete cds,
           clone: RAFL22-78-F07
          Length = 531

 Score = 48.1 bits (24), Expect = 0.028
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                       
Query: 468 gcctctgtgtgcttctcgatgatgccaa 495
           ||||||||||||||||||||||| ||||
Sbjct: 222 gcctctgtgtgcttctcgatgattccaa 195
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>gb|AF346660.1|AF346660 Brassica napus unknown mRNA
          Length = 863

 Score = 48.1 bits (24), Expect = 0.028
 Identities = 72/88 (81%)
 Strand = Plus / Minus

                                                                       
Query: 408 tccttggaagaatccactgttccttccggggtgatcacaatctctggtttcccgaatagc 467
           |||||||||||||| || || ||||| || || ||||||||||| || || || || | |
Sbjct: 647 tccttggaagaatcaaccgtgccttcaggagtaatcacaatctcaggcttaccaaacaac 588

                                       
Query: 468 gcctctgtgtgcttctcgatgatgccaa 495
           ||||| || |||||||| ||||| ||||
Sbjct: 587 gcctccgtatgcttctcaatgatcccaa 560
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>emb|BX823872.1|CNS0A7BB Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTLS88ZA02 of Adult vegetative tissue of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1473

 Score = 48.1 bits (24), Expect = 0.028
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                        
Query: 468  gcctctgtgtgcttctcgatgatgccaa 495
            ||||||||||||||||||||||| ||||
Sbjct: 1216 gcctctgtgtgcttctcgatgattccaa 1189
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>gb|AY089008.1| Arabidopsis thaliana clone 15577 mRNA, complete sequence
          Length = 1543

 Score = 48.1 bits (24), Expect = 0.028
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                        
Query: 468  gcctctgtgtgcttctcgatgatgccaa 495
            ||||||||||||||||||||||| ||||
Sbjct: 1234 gcctctgtgtgcttctcgatgattccaa 1207
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>dbj|AB019230.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MEB5
          Length = 74968

 Score = 48.1 bits (24), Expect = 0.028
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                        
Query: 468  gcctctgtgtgcttctcgatgatgccaa 495
            ||||||||||||||||||||||| ||||
Sbjct: 1986 gcctctgtgtgcttctcgatgattccaa 2013
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>emb|AJ243527.1|ATH243527 Arabidopsis thaliana acp5 gene for acid phosphatase type 5
          Length = 3882

 Score = 48.1 bits (24), Expect = 0.028
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                        
Query: 468  gcctctgtgtgcttctcgatgatgccaa 495
            ||||||||||||||||||||||| ||||
Sbjct: 3589 gcctctgtgtgcttctcgatgattccaa 3616
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>gb|AC101982.9| Mus musculus chromosome 3, clone RP24-346F13, complete sequence
          Length = 162227

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 215   cttcagtgaagcccatgaactt 236
             ||||||||||||||||||||||
Sbjct: 52482 cttcagtgaagcccatgaactt 52503
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>ref|XM_661812.1| Cryptosporidium hominis TU502 chain S, Cryo-Em structure of the
           heavy meromyosin (Chro.20299) partial mRNA
          Length = 2628

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 25  gactcctcaaattcaattttgtgagg 50
           |||||||||||||||||||| |||||
Sbjct: 683 gactcctcaaattcaattttttgagg 658
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>ref|XM_626482.1| Cryptosporidium parvum Iowa II pleckstrin homology (PH) domain
            containing protein with N-terminal ankyrin repeats
            (cgd2_2840), partial mRNA
          Length = 3333

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 25   gactcctcaaattcaattttgtgagg 50
            |||||||||||||||||||| |||||
Sbjct: 1388 gactcctcaaattcaattttttgagg 1363
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>gb|AE006144.1| Pasteurella multocida subsp. multocida str. Pm70 section 111 of 204
            of the complete genome
          Length = 11505

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 396  ctgacatactcatccttggaagaat 420
            |||||||||||| ||||||||||||
Sbjct: 1273 ctgacatactcagccttggaagaat 1297
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>gb|AC146856.8| Medicago truncatula clone mth2-16l23, complete sequence
          Length = 145382

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 28     tcctcaaattcaattttgtga 48
              |||||||||||||||||||||
Sbjct: 109098 tcctcaaattcaattttgtga 109078
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>gb|AY108199.1| Zea mays PCO076094 mRNA sequence
          Length = 861

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 323 ctcgacatcccagaggaaggatccgaatg 351
           |||||| |||||||||||||| |||||||
Sbjct: 587 ctcgacgtcccagaggaaggaaccgaatg 559
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>gb|AC109268.10| Mus musculus chromosome 1, clone RP23-305F24, complete sequence
          Length = 160975

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 262    aatctaccctatctggatcc 281
              ||||||||||||||||||||
Sbjct: 124198 aatctaccctatctggatcc 124217
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>gb|AC165245.2| Mus musculus BAC clone RP24-376N22 from chromosome 9, complete sequence
          Length = 217074

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 407    atccttggaagaatccactg 426
              ||||||||||||||||||||
Sbjct: 142794 atccttggaagaatccactg 142775
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>gb|AC150389.2| Branchiostoma floridae clone CH302-114C5, complete sequence
          Length = 192476

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 297   aaatggtacctggagtccac 316
             ||||||||||||||||||||
Sbjct: 85080 aaatggtacctggagtccac 85099
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>gb|CP000061.1| Aster yellows witches'-broom phytoplasma AYWB, complete genome
          Length = 706569

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 294    acaaaatggtacctggagtc 313
              ||||||||||||||||||||
Sbjct: 276986 acaaaatggtacctggagtc 276967
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>gb|AC121889.3| Mus musculus BAC clone RP24-146D9 from chromosome 1, complete sequence
          Length = 160207

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 262   aatctaccctatctggatcc 281
             ||||||||||||||||||||
Sbjct: 28154 aatctaccctatctggatcc 28173
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>emb|AL451141.13| Human DNA sequence from clone RP11-265E5 on chromosome 6, complete
             sequence
          Length = 63966

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 358   cctctaagatcagccttctc 377
             ||||||||||||||||||||
Sbjct: 18251 cctctaagatcagccttctc 18232
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>emb|AL356454.15| Human DNA sequence from clone RP11-458J24 on chromosome 6, complete
              sequence
          Length = 174333

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 404    ctcatccttggaagaatcca 423
              ||||||||||||||||||||
Sbjct: 148876 ctcatccttggaagaatcca 148857
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>gb|AC137843.15| Mus musculus chromosome 9, clone RP23-413J12, complete sequence
          Length = 197907

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 354    acagcctctaagatcagccttctc 377
              ||||||||||||| ||||||||||
Sbjct: 190730 acagcctctaagaccagccttctc 190753
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>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome
          Length = 5513844

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 323     ctcgacatcccagaggaagg 342
               ||||||||||||||||||||
Sbjct: 1108664 ctcgacatcccagaggaagg 1108683
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>gb|AC068765.16| Homo sapiens 3 BAC RP11-115H18 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 151482

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 49     ggagaacaaagtcatacaag 68
              ||||||||||||||||||||
Sbjct: 127391 ggagaacaaagtcatacaag 127372
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>gb|AC055732.16| Homo sapiens 3 BAC RP11-39E4 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 176459

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 358   cctctaagatcagccttctc 377
             ||||||||||||||||||||
Sbjct: 25377 cctctaagatcagccttctc 25358
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 392      tatcctgacatactcatccttgga 415
                ||||||||||||||| ||||||||
Sbjct: 15576734 tatcctgacatactcttccttgga 15576757
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 27       ctcctcaaattcaattttgt 46
                ||||||||||||||||||||
Sbjct: 14411084 ctcctcaaattcaattttgt 14411065



 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 27       ctcctcaaattcaattttgt 46
                ||||||||||||||||||||
Sbjct: 14410133 ctcctcaaattcaattttgt 14410114
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>dbj|AP003312.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0025H06
          Length = 151547

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 27    ctcctcaaattcaattttgt 46
             ||||||||||||||||||||
Sbjct: 72481 ctcctcaaattcaattttgt 72462



 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 27    ctcctcaaattcaattttgt 46
             ||||||||||||||||||||
Sbjct: 71530 ctcctcaaattcaattttgt 71511
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>dbj|AP004645.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:OJ1119_B10
          Length = 148508

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 392    tatcctgacatactcatccttgga 415
              ||||||||||||||| ||||||||
Sbjct: 124492 tatcctgacatactcttccttgga 124515
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>dbj|AP004459.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0410E11
          Length = 150200

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 392   tatcctgacatactcatccttgga 415
             ||||||||||||||| ||||||||
Sbjct: 10889 tatcctgacatactcttccttgga 10912
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>emb|AL358832.3|CNS05TED Human chromosome 14 DNA sequence BAC R-767H2 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 177945

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 291    gtgacaaaatggtacctgga 310
              ||||||||||||||||||||
Sbjct: 102834 gtgacaaaatggtacctgga 102853
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>emb|CT009732.8| Mouse DNA sequence from clone RP23-72O20 on chromosome 9, complete
             sequence
          Length = 239257

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 407   atccttggaagaatccactg 426
             ||||||||||||||||||||
Sbjct: 62822 atccttggaagaatccactg 62803
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>emb|AL928909.7| Mouse DNA sequence from clone RP23-320I18 on chromosome 2, complete
             sequence
          Length = 187340

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 173   atactctccagggcatgcag 192
             ||||||||||||||||||||
Sbjct: 35704 atactctccagggcatgcag 35685


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,082,968
Number of Sequences: 3902068
Number of extensions: 4082968
Number of successful extensions: 105505
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 105321
Number of HSP's gapped (non-prelim): 184
length of query: 507
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 485
effective length of database: 17,147,199,772
effective search space: 8316391889420
effective search space used: 8316391889420
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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