ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbah61m05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AF537267.1| Synthetic construct insect toxin CryIA(c) gene, c... 44 0.54
2emb|CR954256.1| Anopheles gambiae Pen-1 region; BAC clones 30N20... 44 0.54
3gb|AY667343.1| Ciona intestinalis isolate east coast 5 forkhead ... 42 2.2
4gb|AC135288.1| Solanum demissum chromosome 5 BAC PGEC219 genomic... 42 2.2
5ref|XM_708442.1| Candida albicans SC5314 hypothetical protein (C... 42 2.2
6ref|XM_708401.1| Candida albicans SC5314 hypothetical protein (C... 42 2.2
7emb|AL591004.3| Human DNA sequence from clone RP11-497F24 on chr... 42 2.2
8gb|AC157777.2| Medicago truncatula chromosome 7 BAC clone mth2-2... 42 2.2
9gb|AY271661.1| Homo sapiens v-raf-1 murine leukemia viral oncoge... 42 2.2
10gb|AC026170.5| Homo sapiens chromosome 3 clone RP11-163D23 map 3... 42 2.2
11gb|AC110909.10| Mus musculus chromosome 7, clone RP24-186G5, com... 40 8.5
12gb|AC005592.1| Homo sapiens chromosome 5, BAC clone 79a6 (LBNL H... 40 8.5
13gb|AC135561.3| Oryza sativa (japonica cultivar-group) chromosome... 40 8.5
14ref|XM_367648.1| Magnaporthe grisea 70-15 chromosome III hypothe... 40 8.5
15ref|XM_322354.1| Neurospora crassa OR74A hypothetical protein (N... 40 8.5
16ref|XM_952647.1| Neurospora crassa OR74A hypothetical protein (N... 40 8.5
17gb|AE009144.1| Agrobacterium tumefaciens str. C58 circular chrom... 40 8.5
18emb|CT010162.2| Pan troglodytes chromosome X BAC RP43-009H04, co... 40 8.5
19gb|AC127337.4| Mus musculus BAC clone RP23-168F21 from 12, compl... 40 8.5
20emb|AL357514.19| Human DNA sequence from clone RP1-105O18 on chr... 40 8.5
21emb|AL009176.1|HS137D17 Human DNA sequence from clone RP1-137D17... 40 8.5
22emb|CR378675.1| Photobacterium profundum SS9 chromosome 2; segme... 40 8.5
23emb|BX294154.1| Pirellula sp. strain 1 complete genome; segment ... 40 8.5
24gb|AC160021.3| Pan troglodytes BAC clone CH251-564M21 from chrom... 40 8.5
25emb|AL766856.1|SAG766856 Streptococcus agalactiae NEM316 complet... 40 8.5
26emb|AL604062.15| Mouse DNA sequence from clone RP23-104B6 on chr... 40 8.5
27gb|AC023711.5| Drosophila melanogaster X BAC RP98-6C4 (Roswell P... 40 8.5
28gb|AC011463.7| Homo sapiens chromosome 19 clone CTC-442E9, compl... 40 8.5
29gb|AC023685.4| Drosophila melanogaster 3L BAC RP98-20N12 (Roswel... 40 8.5
30gb|AF511750.1| Hepatitis C virus isolate XF24 partial sequence 40 8.5
31ref|NM_144220.1| Drosophila melanogaster CG12714-RB (CG12714), mRNA 40 8.5
32gb|AC008533.9| Homo sapiens chromosome 5 clone CTC-483L24, compl... 40 8.5
33gb|AC078957.16| Homo sapiens Xp BAC RP11-339E16 (Roswell Park Ca... 40 8.5
34gb|AE007869.1| Agrobacterium tumefaciens str. C58, complete genome 40 8.5
35ref|XM_394771.2| PREDICTED: Apis mellifera insulin-like receptor... 40 8.5
36dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.5
37gb|AC092679.2| Homo sapiens BAC clone RP11-676D22 from 2, comple... 40 8.5
38gb|AC023115.6| Homo sapiens BAC clone RP11-269A16 from 2, comple... 40 8.5
39gb|AC171180.2| Pan troglodytes BAC clone CH251-283C10 from chrom... 40 8.5
40emb|AL954695.14| Zebrafish DNA sequence from clone CH211-202N12 ... 40 8.5
41dbj|AK071260.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 8.5
42dbj|AK061288.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 8.5
43gb|AE003491.4| Drosophila melanogaster chromosome X, section 43 ... 40 8.5
44emb|BX005199.10| Zebrafish DNA sequence from clone DKEY-12I13 in... 40 8.5
45gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 40 8.5
46gb|AF067496.1|AF067496 Leishmania donovani aminophospholipid tra... 40 8.5
47emb|CT010408.3| Pan troglodytes chromosome X BAC RP43-014H14, co... 40 8.5
48gb|DQ084248.1| Uncultured bacterium BAC-L1N9, complete sequence ... 40 8.5
49emb|AL611936.11| Mouse DNA sequence from clone RP23-40G2 on chro... 40 8.5
50emb|AL607109.21| Mouse DNA sequence from clone RP23-352D7 on chr... 40 8.5 
>gb|AF537267.1| Synthetic construct insect toxin CryIA(c) gene, complete cds
          Length = 1848

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 517  atgttgttgccgctgctgttca 538
            ||||||||||||||||||||||
Sbjct: 1523 atgttgttgccgctgctgttca 1502
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>emb|CR954256.1| Anopheles gambiae Pen-1 region; BAC clones 30N20, 10K02, 13E09, 31J16 and
              01G10 from library NotreDame1 of Anopheles gambiae (African
              malaria mosquito) strain PEST
          Length = 447895

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 137    caataatttgtctaatttggac 158
              ||||||||||||||||||||||
Sbjct: 444752 caataatttgtctaatttggac 444731
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>gb|AY667343.1| Ciona intestinalis isolate east coast 5 forkhead gene, partial cds
          Length = 4478

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 125  tatatttttgaccaataattt 145
            |||||||||||||||||||||
Sbjct: 1252 tatatttttgaccaataattt 1232
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>gb|AC135288.1| Solanum demissum chromosome 5 BAC PGEC219 genomic sequence, complete
             sequence
          Length = 124895

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 117   tttccctatatatttttgaccaataattt 145
             |||||||||||||||| |||| |||||||
Sbjct: 66920 tttccctatatattttggacctataattt 66948
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>ref|XM_708442.1| Candida albicans SC5314 hypothetical protein (CaO19.11350), mRNA
          Length = 1755

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 177 cccaataatttgtttttcaag 197
           |||||||||||||||||||||
Sbjct: 829 cccaataatttgtttttcaag 849
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>ref|XM_708401.1| Candida albicans SC5314 hypothetical protein (CaO19.3869), mRNA
          Length = 1755

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 177 cccaataatttgtttttcaag 197
           |||||||||||||||||||||
Sbjct: 829 cccaataatttgtttttcaag 849
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>emb|AL591004.3| Human DNA sequence from clone RP11-497F24 on chromosome 6, complete
             sequence
          Length = 159845

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 212   tatataattcagactgatggagtag 236
             ||||||||||| |||||||||||||
Sbjct: 23825 tatataattcatactgatggagtag 23849
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>gb|AC157777.2| Medicago truncatula chromosome 7 BAC clone mth2-25c14, complete
             sequence
          Length = 106857

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 27    aaaatattgtgtacacactacaaaccaaa 55
             |||||||||| |||| |||||||||||||
Sbjct: 86993 aaaatattgtatacaaactacaaaccaaa 86965
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>gb|AY271661.1| Homo sapiens v-raf-1 murine leukemia viral oncogene homolog 1 (RAF1)
             gene, complete cds
          Length = 82374

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 518   tgttgttgccgctgctgttca 538
             |||||||||||||||||||||
Sbjct: 27367 tgttgttgccgctgctgttca 27387
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>gb|AC026170.5| Homo sapiens chromosome 3 clone RP11-163D23 map 3p, complete sequence
          Length = 145212

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 518   tgttgttgccgctgctgttca 538
             |||||||||||||||||||||
Sbjct: 62588 tgttgttgccgctgctgttca 62568
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>gb|AC110909.10| Mus musculus chromosome 7, clone RP24-186G5, complete sequence
          Length = 161738

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 436   gacagcctcttgcgcttccc 455
             ||||||||||||||||||||
Sbjct: 89974 gacagcctcttgcgcttccc 89993
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>gb|AC005592.1| Homo sapiens chromosome 5, BAC clone 79a6 (LBNL H172), complete
            sequence
          Length = 90693

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 542  ggaattggctcatgatgggg 561
            ||||||||||||||||||||
Sbjct: 8135 ggaattggctcatgatgggg 8154
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>gb|AC135561.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0086N07 map S790A, complete sequence
          Length = 178523

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 69    tgatcgatggacctagctag 88
             ||||||||||||||||||||
Sbjct: 93740 tgatcgatggacctagctag 93759
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>ref|XM_367648.1| Magnaporthe grisea 70-15 chromosome III hypothetical protein
            (MG07559.4) partial mRNA
          Length = 1728

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 383  tcacggccgccgctggctgg 402
            ||||||||||||||||||||
Sbjct: 1649 tcacggccgccgctggctgg 1668
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>ref|XM_322354.1| Neurospora crassa OR74A hypothetical protein (NCU00269.1) partial
            mRNA
          Length = 2865

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 194  caagtcaccacttggccgta 213
            ||||||||||||||||||||
Sbjct: 2307 caagtcaccacttggccgta 2326
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>ref|XM_952647.1| Neurospora crassa OR74A hypothetical protein (NCU00269.1) partial
            mRNA
          Length = 2865

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 194  caagtcaccacttggccgta 213
            ||||||||||||||||||||
Sbjct: 2307 caagtcaccacttggccgta 2326
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>gb|AE009144.1| Agrobacterium tumefaciens str. C58 circular chromosome, section 170
            of 256 of the complete sequence
          Length = 10570

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 562  tggccgaagagggcggcgtg 581
            ||||||||||||||||||||
Sbjct: 5189 tggccgaagagggcggcgtg 5170
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>emb|CT010162.2| Pan troglodytes chromosome X BAC RP43-009H04, complete sequence
          Length = 195301

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 110    caatccctttccctatatattttt 133
              |||| |||||||||||||||||||
Sbjct: 149708 caattcctttccctatatattttt 149685
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>gb|AC127337.4| Mus musculus BAC clone RP23-168F21 from 12, complete sequence
          Length = 209066

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 126    atatttttgaccaataattt 145
              ||||||||||||||||||||
Sbjct: 112779 atatttttgaccaataattt 112760
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>emb|AL357514.19| Human DNA sequence from clone RP1-105O18 on chromosome 6 Contains a
             novel gene and a CpG island, complete sequence
          Length = 140630

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 132   ttgaccaataatttgtctaa 151
             ||||||||||||||||||||
Sbjct: 18133 ttgaccaataatttgtctaa 18114
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>emb|AL009176.1|HS137D17 Human DNA sequence from clone RP1-137D17 on chromosome 6q27 Contains a
             novel gene (FLJ21008) and two CpG islands, complete
             sequence
          Length = 87903

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 178   ccaataatttgtttttcaag 197
             ||||||||||||||||||||
Sbjct: 84957 ccaataatttgtttttcaag 84976
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>emb|CR378675.1| Photobacterium profundum SS9 chromosome 2; segment 1/7
          Length = 349544

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 17     ataggagacaaaaatattgt 36
              ||||||||||||||||||||
Sbjct: 231941 ataggagacaaaaatattgt 231922
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>emb|BX294154.1| Pirellula sp. strain 1 complete genome; segment 22/24
          Length = 299050

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 560  ggtggccgaagagggcggcgtgttgatc 587
            |||| ||||||||||||| |||||||||
Sbjct: 5098 ggtgcccgaagagggcggtgtgttgatc 5125
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>gb|AC160021.3| Pan troglodytes BAC clone CH251-564M21 from chromosome unknown,
            complete sequence
          Length = 201789

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 542  ggaattggctcatgatgggg 561
            ||||||||||||||||||||
Sbjct: 5464 ggaattggctcatgatgggg 5483
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>emb|AL766856.1|SAG766856 Streptococcus agalactiae NEM316 complete genome, segment 14
          Length = 103485

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 27    aaaatattgtgtacacactacaaa 50
             ||||||||||||||||||| ||||
Sbjct: 41500 aaaatattgtgtacacacttcaaa 41523
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>emb|AL604062.15| Mouse DNA sequence from clone RP23-104B6 on chromosome 11 Contains a
            novel gene, a ferritin light chain (Ftl) pseudogene and a
            CpG island, complete sequence
          Length = 216510

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 16   cataggagacaaaaatattg 35
            ||||||||||||||||||||
Sbjct: 4398 cataggagacaaaaatattg 4417
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>gb|AC023711.5| Drosophila melanogaster X BAC RP98-6C4 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 174157

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 517    atgttgttgccgctgctgtt 536
              ||||||||||||||||||||
Sbjct: 101777 atgttgttgccgctgctgtt 101758
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>gb|AC011463.7| Homo sapiens chromosome 19 clone CTC-442E9, complete sequence
          Length = 101944

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 54    aatcaactagaagtatgatc 73
             ||||||||||||||||||||
Sbjct: 35760 aatcaactagaagtatgatc 35779
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>gb|AC023685.4| Drosophila melanogaster 3L BAC RP98-20N12 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 167926

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 517    atgttgttgccgctgctgtt 536
              ||||||||||||||||||||
Sbjct: 131191 atgttgttgccgctgctgtt 131172
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>gb|AF511750.1| Hepatitis C virus isolate XF24 partial sequence
          Length = 1020

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 316 tgcaaggtgttgttgccgac 335
           ||||||||||||||||||||
Sbjct: 914 tgcaaggtgttgttgccgac 895
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>ref|NM_144220.1| Drosophila melanogaster CG12714-RB (CG12714), mRNA
          Length = 963

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 517 atgttgttgccgctgctgtt 536
           ||||||||||||||||||||
Sbjct: 1   atgttgttgccgctgctgtt 20
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>gb|AC008533.9| Homo sapiens chromosome 5 clone CTC-483L24, complete sequence
          Length = 254730

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 542    ggaattggctcatgatgggg 561
              ||||||||||||||||||||
Sbjct: 242710 ggaattggctcatgatgggg 242729
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>gb|AC078957.16| Homo sapiens Xp BAC RP11-339E16 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 198088

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 110   caatccctttccctatatattttt 133
             |||| |||||||||||||||||||
Sbjct: 34597 caattcctttccctatatattttt 34574
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>gb|AE007869.1| Agrobacterium tumefaciens str. C58, complete genome
          Length = 2841581

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 562     tggccgaagagggcggcgtg 581
               ||||||||||||||||||||
Sbjct: 1880719 tggccgaagagggcggcgtg 1880700
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>ref|XM_394771.2| PREDICTED: Apis mellifera insulin-like receptor precursor (InR),
           mRNA
          Length = 6126

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 517 atgttgttgccgctgctgtt 536
           ||||||||||||||||||||
Sbjct: 1   atgttgttgccgctgctgtt 20
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 69       tgatcgatggacctagctag 88
                ||||||||||||||||||||
Sbjct: 13090340 tgatcgatggacctagctag 13090321
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>gb|AC092679.2| Homo sapiens BAC clone RP11-676D22 from 2, complete sequence
          Length = 90621

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 170   aataggccccaataatttgttttt 193
             |||||||||||| |||||||||||
Sbjct: 17291 aataggccccaacaatttgttttt 17268
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>gb|AC023115.6| Homo sapiens BAC clone RP11-269A16 from 2, complete sequence
          Length = 112289

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 16    cataggagacaaaaatattg 35
             ||||||||||||||||||||
Sbjct: 61424 cataggagacaaaaatattg 61405
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>gb|AC171180.2| Pan troglodytes BAC clone CH251-283C10 from chromosome unknown,
             complete sequence
          Length = 166310

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 542   ggaattggctcatgatgggg 561
             ||||||||||||||||||||
Sbjct: 61690 ggaattggctcatgatgggg 61709
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>emb|AL954695.14| Zebrafish DNA sequence from clone CH211-202N12 in linkage group 1,
              complete sequence
          Length = 207004

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 113    tccctttccctatatatttttgac 136
              ||||||||||||| ||||||||||
Sbjct: 136192 tccctttccctatttatttttgac 136215
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>dbj|AK071260.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023086A05, full
           insert sequence
          Length = 843

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 69  tgatcgatggacctagctag 88
           ||||||||||||||||||||
Sbjct: 624 tgatcgatggacctagctag 605
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>dbj|AK061288.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-H12, full
           insert sequence
          Length = 846

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 69  tgatcgatggacctagctag 88
           ||||||||||||||||||||
Sbjct: 623 tgatcgatggacctagctag 604
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>gb|AE003491.4| Drosophila melanogaster chromosome X, section 43 of 74 of the complete
              sequence
          Length = 332030

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 517    atgttgttgccgctgctgtt 536
              ||||||||||||||||||||
Sbjct: 187876 atgttgttgccgctgctgtt 187857
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>emb|BX005199.10| Zebrafish DNA sequence from clone DKEY-12I13 in linkage group 20,
             complete sequence
          Length = 119113

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 126   atatttttgaccaataattt 145
             ||||||||||||||||||||
Sbjct: 39435 atatttttgaccaataattt 39454
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 69       tgatcgatggacctagctag 88
                ||||||||||||||||||||
Sbjct: 13170519 tgatcgatggacctagctag 13170500
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>gb|AF067496.1|AF067496 Leishmania donovani aminophospholipid translocase (APLT1) gene,
            complete cds
          Length = 6640

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 291  gagcagcggctggcccagtgacccctgc 318
            |||||||||||||| ||||| |||||||
Sbjct: 6560 gagcagcggctggcgcagtggcccctgc 6587
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>emb|CT010408.3| Pan troglodytes chromosome X BAC RP43-014H14, complete sequence
          Length = 172332

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 110    caatccctttccctatatattttt 133
              |||| |||||||||||||||||||
Sbjct: 139154 caattcctttccctatatattttt 139177
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>gb|DQ084248.1| Uncultured bacterium BAC-L1N9, complete sequence of BAC
          Length = 25361

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 510   ctgcgacatgttgttgccgc 529
             ||||||||||||||||||||
Sbjct: 22363 ctgcgacatgttgttgccgc 22344
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>emb|AL611936.11| Mouse DNA sequence from clone RP23-40G2 on chromosome 4, complete
             sequence
          Length = 166167

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 528   gctgctgttcacatggaattggct 551
             |||| |||||||||||||||||||
Sbjct: 64811 gctgatgttcacatggaattggct 64834
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>emb|AL607109.21| Mouse DNA sequence from clone RP23-352D7 on chromosome 4, complete
             sequence
          Length = 187252

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 514   gacatgttgttgccgctgctgttc 537
             ||||||||||||| ||||||||||
Sbjct: 59263 gacatgttgttgctgctgctgttc 59286


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,137,235
Number of Sequences: 3902068
Number of extensions: 5137235
Number of successful extensions: 98557
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 50
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 98352
Number of HSP's gapped (non-prelim): 205
length of query: 624
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 601
effective length of database: 17,143,297,704
effective search space: 10303121920104
effective search space used: 10303121920104
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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