Clone Name | rbah61m03 |
---|---|
Clone Library Name | barley_pub |
>ref|XM_476669.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1439 Score = 345 bits (174), Expect = 8e-92 Identities = 245/269 (91%) Strand = Plus / Minus Query: 179 ttacaagcgggacggcatgacgccgaatttgtcggcctcggtgacgacgtggttgcgggt 238 ||||||||| |||||||||||||||| |||||||||||||||| ||||||||||||||| Sbjct: 1176 ttacaagcgagacggcatgacgccgagcttgtcggcctcggtgatgacgtggttgcgggt 1117 Query: 239 gatgtctgctagcgagttgcagccgctgagcgccatggtcagctcgaactcgtcgcgcag 298 |||||| || || ||| |||||||||||||||||||||| ||||||||||||||||| || Sbjct: 1116 gatgtcggcgagggaggtgcagccgctgagcgccatggtgagctcgaactcgtcgcggag 1057 Query: 299 catcttgagcacgttgctcaccccggcctccccggccaccgccagcgagaacaccaccgg 358 ||||| |||||||| | || ||||||||||| ||| |||||||||||||||||||||| Sbjct: 1056 catctgcagcacgttccggactccggcctcccccgccgccgccagcgagaacaccaccgg 997 Query: 359 ccttccgatgaagacgccggcggcgccgagagcgagcgccttgaagacgtccgtgccgcg 418 ||| |||||||||||||||||||||||||| |||||||||||||||||||| |||||||| Sbjct: 996 cctcccgatgaagacgccggcggcgccgagggcgagcgccttgaagacgtcggtgccgcg 937 Query: 419 gcggacaccgccgtncaggaagacgggga 447 |||||| ||||||| ||||||||||||| Sbjct: 936 gcggacgccgccgtcgaggaagacgggga 908
>ref|XM_506164.1| PREDICTED Oryza sativa (japonica cultivar-group), B1364A02.11-1 mRNA Length = 1501 Score = 345 bits (174), Expect = 8e-92 Identities = 245/269 (91%) Strand = Plus / Minus Query: 179 ttacaagcgggacggcatgacgccgaatttgtcggcctcggtgacgacgtggttgcgggt 238 ||||||||| |||||||||||||||| |||||||||||||||| ||||||||||||||| Sbjct: 1217 ttacaagcgagacggcatgacgccgagcttgtcggcctcggtgatgacgtggttgcgggt 1158 Query: 239 gatgtctgctagcgagttgcagccgctgagcgccatggtcagctcgaactcgtcgcgcag 298 |||||| || || ||| |||||||||||||||||||||| ||||||||||||||||| || Sbjct: 1157 gatgtcggcgagggaggtgcagccgctgagcgccatggtgagctcgaactcgtcgcggag 1098 Query: 299 catcttgagcacgttgctcaccccggcctccccggccaccgccagcgagaacaccaccgg 358 ||||| |||||||| | || ||||||||||| ||| |||||||||||||||||||||| Sbjct: 1097 catctgcagcacgttccggactccggcctcccccgccgccgccagcgagaacaccaccgg 1038 Query: 359 ccttccgatgaagacgccggcggcgccgagagcgagcgccttgaagacgtccgtgccgcg 418 ||| |||||||||||||||||||||||||| |||||||||||||||||||| |||||||| Sbjct: 1037 cctcccgatgaagacgccggcggcgccgagggcgagcgccttgaagacgtcggtgccgcg 978 Query: 419 gcggacaccgccgtncaggaagacgggga 447 |||||| ||||||| ||||||||||||| Sbjct: 977 gcggacgccgccgtcgaggaagacgggga 949
>dbj|AK120929.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023036A14, full insert sequence Length = 1738 Score = 345 bits (174), Expect = 8e-92 Identities = 245/269 (91%) Strand = Plus / Minus Query: 179 ttacaagcgggacggcatgacgccgaatttgtcggcctcggtgacgacgtggttgcgggt 238 ||||||||| |||||||||||||||| |||||||||||||||| ||||||||||||||| Sbjct: 1475 ttacaagcgagacggcatgacgccgagcttgtcggcctcggtgatgacgtggttgcgggt 1416 Query: 239 gatgtctgctagcgagttgcagccgctgagcgccatggtcagctcgaactcgtcgcgcag 298 |||||| || || ||| |||||||||||||||||||||| ||||||||||||||||| || Sbjct: 1415 gatgtcggcgagggaggtgcagccgctgagcgccatggtgagctcgaactcgtcgcggag 1356 Query: 299 catcttgagcacgttgctcaccccggcctccccggccaccgccagcgagaacaccaccgg 358 ||||| |||||||| | || ||||||||||| ||| |||||||||||||||||||||| Sbjct: 1355 catctgcagcacgttccggactccggcctcccccgccgccgccagcgagaacaccaccgg 1296 Query: 359 ccttccgatgaagacgccggcggcgccgagagcgagcgccttgaagacgtccgtgccgcg 418 ||| |||||||||||||||||||||||||| |||||||||||||||||||| |||||||| Sbjct: 1295 cctcccgatgaagacgccggcggcgccgagggcgagcgccttgaagacgtcggtgccgcg 1236 Query: 419 gcggacaccgccgtncaggaagacgggga 447 |||||| ||||||| ||||||||||||| Sbjct: 1235 gcggacgccgccgtcgaggaagacgggga 1207
>dbj|AK103933.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-E11, full insert sequence Length = 1439 Score = 345 bits (174), Expect = 8e-92 Identities = 245/269 (91%) Strand = Plus / Minus Query: 179 ttacaagcgggacggcatgacgccgaatttgtcggcctcggtgacgacgtggttgcgggt 238 ||||||||| |||||||||||||||| |||||||||||||||| ||||||||||||||| Sbjct: 1176 ttacaagcgagacggcatgacgccgagcttgtcggcctcggtgatgacgtggttgcgggt 1117 Query: 239 gatgtctgctagcgagttgcagccgctgagcgccatggtcagctcgaactcgtcgcgcag 298 |||||| || || ||| |||||||||||||||||||||| ||||||||||||||||| || Sbjct: 1116 gatgtcggcgagggaggtgcagccgctgagcgccatggtgagctcgaactcgtcgcggag 1057 Query: 299 catcttgagcacgttgctcaccccggcctccccggccaccgccagcgagaacaccaccgg 358 ||||| |||||||| | || ||||||||||| ||| |||||||||||||||||||||| Sbjct: 1056 catctgcagcacgttccggactccggcctcccccgccgccgccagcgagaacaccaccgg 997 Query: 359 ccttccgatgaagacgccggcggcgccgagagcgagcgccttgaagacgtccgtgccgcg 418 ||| |||||||||||||||||||||||||| |||||||||||||||||||| |||||||| Sbjct: 996 cctcccgatgaagacgccggcggcgccgagggcgagcgccttgaagacgtcggtgccgcg 937 Query: 419 gcggacaccgccgtncaggaagacgggga 447 |||||| ||||||| ||||||||||||| Sbjct: 936 gcggacgccgccgtcgaggaagacgggga 908
>dbj|AK062189.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-046-E08, full insert sequence Length = 1501 Score = 345 bits (174), Expect = 8e-92 Identities = 245/269 (91%) Strand = Plus / Minus Query: 179 ttacaagcgggacggcatgacgccgaatttgtcggcctcggtgacgacgtggttgcgggt 238 ||||||||| |||||||||||||||| |||||||||||||||| ||||||||||||||| Sbjct: 1217 ttacaagcgagacggcatgacgccgagcttgtcggcctcggtgatgacgtggttgcgggt 1158 Query: 239 gatgtctgctagcgagttgcagccgctgagcgccatggtcagctcgaactcgtcgcgcag 298 |||||| || || ||| |||||||||||||||||||||| ||||||||||||||||| || Sbjct: 1157 gatgtcggcgagggaggtgcagccgctgagcgccatggtgagctcgaactcgtcgcggag 1098 Query: 299 catcttgagcacgttgctcaccccggcctccccggccaccgccagcgagaacaccaccgg 358 ||||| |||||||| | || ||||||||||| ||| |||||||||||||||||||||| Sbjct: 1097 catctgcagcacgttccggactccggcctcccccgccgccgccagcgagaacaccaccgg 1038 Query: 359 ccttccgatgaagacgccggcggcgccgagagcgagcgccttgaagacgtccgtgccgcg 418 ||| |||||||||||||||||||||||||| |||||||||||||||||||| |||||||| Sbjct: 1037 cctcccgatgaagacgccggcggcgccgagggcgagcgccttgaagacgtcggtgccgcg 978 Query: 419 gcggacaccgccgtncaggaagacgggga 447 |||||| ||||||| ||||||||||||| Sbjct: 977 gcggacgccgccgtcgaggaagacgggga 949
>dbj|AK120304.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013052N09, full insert sequence Length = 1526 Score = 238 bits (120), Expect = 1e-59 Identities = 180/200 (90%) Strand = Plus / Minus Query: 233 gcgggtgatgtctgctagcgagttgcagccgctgagcgccatggtcagctcgaactcgtc 292 |||||||||||| || |||||| |||| ||||||||||||||||| ||||||||||| || Sbjct: 1131 gcgggtgatgtcggcgagcgaggtgcatccgctgagcgccatggtgagctcgaactcctc 1072 Query: 293 gcgcagcatcttgagcacgttgctcaccccggcctccccggccaccgccagcgagaacac 352 |||| |||| |||||||| ||||||||||||||||| || ||||||||| |||||| Sbjct: 1071 ccgcatcatccgcagcacgttcctcaccccggcctccccctccgccgccagcgcgaacac 1012 Query: 353 caccggccttccgatgaagacgccggcggcgccgagagcgagcgccttgaagacgtccgt 412 ||||||||| |||||||||||||||||||||||||| |||||||||||||||||||| || Sbjct: 1011 caccggcctcccgatgaagacgccggcggcgccgagggcgagcgccttgaagacgtcggt 952 Query: 413 gccgcggcggacaccgccgt 432 |||||||||||| ||||||| Sbjct: 951 gccgcggcggacgccgccgt 932
>dbj|AK098878.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001E15, full insert sequence Length = 1522 Score = 238 bits (120), Expect = 1e-59 Identities = 180/200 (90%) Strand = Plus / Minus Query: 233 gcgggtgatgtctgctagcgagttgcagccgctgagcgccatggtcagctcgaactcgtc 292 |||||||||||| || |||||| |||| ||||||||||||||||| ||||||||||| || Sbjct: 1127 gcgggtgatgtcggcgagcgaggtgcatccgctgagcgccatggtgagctcgaactcctc 1068 Query: 293 gcgcagcatcttgagcacgttgctcaccccggcctccccggccaccgccagcgagaacac 352 |||| |||| |||||||| ||||||||||||||||| || ||||||||| |||||| Sbjct: 1067 ccgcatcatccgcagcacgttcctcaccccggcctccccctccgccgccagcgcgaacac 1008 Query: 353 caccggccttccgatgaagacgccggcggcgccgagagcgagcgccttgaagacgtccgt 412 ||||||||| |||||||||||||||||||||||||| |||||||||||||||||||| || Sbjct: 1007 caccggcctcccgatgaagacgccggcggcgccgagggcgagcgccttgaagacgtcggt 948 Query: 413 gccgcggcggacaccgccgt 432 |||||||||||| ||||||| Sbjct: 947 gccgcggcggacgccgccgt 928
>dbj|AK061719.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-037-H12, full insert sequence Length = 1586 Score = 238 bits (120), Expect = 1e-59 Identities = 180/200 (90%) Strand = Plus / Minus Query: 233 gcgggtgatgtctgctagcgagttgcagccgctgagcgccatggtcagctcgaactcgtc 292 |||||||||||| || |||||| |||| ||||||||||||||||| ||||||||||| || Sbjct: 1191 gcgggtgatgtcggcgagcgaggtgcatccgctgagcgccatggtgagctcgaactcctc 1132 Query: 293 gcgcagcatcttgagcacgttgctcaccccggcctccccggccaccgccagcgagaacac 352 |||| |||| |||||||| ||||||||||||||||| || ||||||||| |||||| Sbjct: 1131 ccgcatcatccgcagcacgttcctcaccccggcctccccctccgccgccagcgcgaacac 1072 Query: 353 caccggccttccgatgaagacgccggcggcgccgagagcgagcgccttgaagacgtccgt 412 ||||||||| |||||||||||||||||||||||||| |||||||||||||||||||| || Sbjct: 1071 caccggcctcccgatgaagacgccggcggcgccgagggcgagcgccttgaagacgtcggt 1012 Query: 413 gccgcggcggacaccgccgt 432 |||||||||||| ||||||| Sbjct: 1011 gccgcggcggacgccgccgt 992
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 224 bits (113), Expect = 2e-55 Identities = 170/189 (89%) Strand = Plus / Minus Query: 179 ttacaagcgggacggcatgacgccgaatttgtcggcctcggtgacgacgtggttgcgggt 238 ||||||||| |||||||||||||||| |||||||||||||||| ||||||||||||||| Sbjct: 2833211 ttacaagcgagacggcatgacgccgagcttgtcggcctcggtgatgacgtggttgcgggt 2833152 Query: 239 gatgtctgctagcgagttgcagccgctgagcgccatggtcagctcgaactcgtcgcgcag 298 |||||| || || ||| |||||||||||||||||||||| ||||||||||||||||| || Sbjct: 2833151 gatgtcggcgagggaggtgcagccgctgagcgccatggtgagctcgaactcgtcgcggag 2833092 Query: 299 catcttgagcacgttgctcaccccggcctccccggccaccgccagcgagaacaccaccgg 358 ||||| |||||||| | || ||||||||||| ||| |||||||||||||||||||||| Sbjct: 2833091 catctgcagcacgttccggactccggcctcccccgccgccgccagcgagaacaccaccgg 2833032 Query: 359 ccttccgat 367 ||| ||||| Sbjct: 2833031 cctcccgat 2833023 Score = 121 bits (61), Expect = 2e-24 Identities = 75/80 (93%) Strand = Plus / Minus Query: 368 gaagacgccggcggcgccgagagcgagcgccttgaagacgtccgtgccgcggcggacacc 427 ||||||||||||||||||||| |||||||||||||||||||| |||||||||||||| || Sbjct: 2832941 gaagacgccggcggcgccgagggcgagcgccttgaagacgtcggtgccgcggcggacgcc 2832882 Query: 428 gccgtncaggaagacgggga 447 ||||| ||||||||||||| Sbjct: 2832881 gccgtcgaggaagacgggga 2832862
>dbj|AP006163.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:B1364A02 Length = 137933 Score = 224 bits (113), Expect = 2e-55 Identities = 170/189 (89%) Strand = Plus / Minus Query: 179 ttacaagcgggacggcatgacgccgaatttgtcggcctcggtgacgacgtggttgcgggt 238 ||||||||| |||||||||||||||| |||||||||||||||| ||||||||||||||| Sbjct: 136772 ttacaagcgagacggcatgacgccgagcttgtcggcctcggtgatgacgtggttgcgggt 136713 Query: 239 gatgtctgctagcgagttgcagccgctgagcgccatggtcagctcgaactcgtcgcgcag 298 |||||| || || ||| |||||||||||||||||||||| ||||||||||||||||| || Sbjct: 136712 gatgtcggcgagggaggtgcagccgctgagcgccatggtgagctcgaactcgtcgcggag 136653 Query: 299 catcttgagcacgttgctcaccccggcctccccggccaccgccagcgagaacaccaccgg 358 ||||| |||||||| | || ||||||||||| ||| |||||||||||||||||||||| Sbjct: 136652 catctgcagcacgttccggactccggcctcccccgccgccgccagcgagaacaccaccgg 136593 Query: 359 ccttccgat 367 ||| ||||| Sbjct: 136592 cctcccgat 136584 Score = 121 bits (61), Expect = 2e-24 Identities = 75/80 (93%) Strand = Plus / Minus Query: 368 gaagacgccggcggcgccgagagcgagcgccttgaagacgtccgtgccgcggcggacacc 427 ||||||||||||||||||||| |||||||||||||||||||| |||||||||||||| || Sbjct: 136502 gaagacgccggcggcgccgagggcgagcgccttgaagacgtcggtgccgcggcggacgcc 136443 Query: 428 gccgtncaggaagacgggga 447 ||||| ||||||||||||| Sbjct: 136442 gccgtcgaggaagacgggga 136423
>dbj|AP005632.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0050B07 Length = 142134 Score = 224 bits (113), Expect = 2e-55 Identities = 170/189 (89%) Strand = Plus / Minus Query: 179 ttacaagcgggacggcatgacgccgaatttgtcggcctcggtgacgacgtggttgcgggt 238 ||||||||| |||||||||||||||| |||||||||||||||| ||||||||||||||| Sbjct: 3498 ttacaagcgagacggcatgacgccgagcttgtcggcctcggtgatgacgtggttgcgggt 3439 Query: 239 gatgtctgctagcgagttgcagccgctgagcgccatggtcagctcgaactcgtcgcgcag 298 |||||| || || ||| |||||||||||||||||||||| ||||||||||||||||| || Sbjct: 3438 gatgtcggcgagggaggtgcagccgctgagcgccatggtgagctcgaactcgtcgcggag 3379 Query: 299 catcttgagcacgttgctcaccccggcctccccggccaccgccagcgagaacaccaccgg 358 ||||| |||||||| | || ||||||||||| ||| |||||||||||||||||||||| Sbjct: 3378 catctgcagcacgttccggactccggcctcccccgccgccgccagcgagaacaccaccgg 3319 Query: 359 ccttccgat 367 ||| ||||| Sbjct: 3318 cctcccgat 3310 Score = 121 bits (61), Expect = 2e-24 Identities = 75/80 (93%) Strand = Plus / Minus Query: 368 gaagacgccggcggcgccgagagcgagcgccttgaagacgtccgtgccgcggcggacacc 427 ||||||||||||||||||||| |||||||||||||||||||| |||||||||||||| || Sbjct: 3228 gaagacgccggcggcgccgagggcgagcgccttgaagacgtcggtgccgcggcggacgcc 3169 Query: 428 gccgtncaggaagacgggga 447 ||||| ||||||||||||| Sbjct: 3168 gccgtcgaggaagacgggga 3149
>gb|AY108197.1| Zea mays PCO065133 mRNA sequence Length = 1667 Score = 224 bits (113), Expect = 2e-55 Identities = 218/253 (86%) Strand = Plus / Minus Query: 180 tacaagcgggacggcatgacgccgaatttgtcggcctcggtgacgacgtggttgcgggtg 239 |||||||| ||||| ||| ||| || ||||||| |||||||| || ||| ||||||||| Sbjct: 1323 tacaagcgcgacgggatggcgctgagcttgtcggactcggtgatgatgtgcttgcgggtg 1264 Query: 240 atgtctgctagcgagttgcagccgctgagcgccatggtcagctcgaactcgtcgcgcagc 299 || || || || ||| |||||||||||||||||||||| |||||||||||||| |||||| Sbjct: 1263 atttcggcgagggaggtgcagccgctgagcgccatggtgagctcgaactcgtcccgcagc 1204 Query: 300 atcttgagcacgttgctcaccccggcctccccggccaccgccagcgagaacaccaccggc 359 || || |||||| ||| |||||||| || ||| ||||||| ||||||||||||||| Sbjct: 1203 atgcgcaggacgttggacacgccggcctcgcccgccgccgccagggagaacaccaccggc 1144 Query: 360 cttccgatgaagacgccggcggcgccgagagcgagcgccttgaagacgtccgtgccgcgg 419 || |||| ||| ||||||||||||||||| |||||||||||||||||||| ||||||||| Sbjct: 1143 ctcccgacgaatacgccggcggcgccgagcgcgagcgccttgaagacgtcggtgccgcgg 1084 Query: 420 cggacaccgccgt 432 ||||| ||||||| Sbjct: 1083 cggacgccgccgt 1071
>gb|AF022740.1|AF022740 Oryza sativa glycolate oxidase (GOX) mRNA, complete cds Length = 1473 Score = 206 bits (104), Expect = 5e-50 Identities = 176/200 (88%) Strand = Plus / Minus Query: 233 gcgggtgatgtctgctagcgagttgcagccgctgagcgccatggtcagctcgaactcgtc 292 |||||||||||| || |||||| |||| ||||||| ||||||||| ||||||||||| || Sbjct: 1097 gcgggtgatgtcggcgagcgaggtgcatccgctgaacgccatggtgagctcgaactcctc 1038 Query: 293 gcgcagcatcttgagcacgttgctcaccccggcctccccggccaccgccagcgagaacac 352 |||| |||| |||| ||| ||||||||||||| ||| || ||||||||| |||||| Sbjct: 1037 ccgcatcatccgcagcaggttcctcaccccggccttcccctccgccgccagcgcgaacac 978 Query: 353 caccggccttccgatgaagacgccggcggcgccgagagcgagcgccttgaagacgtccgt 412 ||||||| | |||||||||||||||||||||||||| |||||||||||||||||||| || Sbjct: 977 caccggcttcccgatgaagacgccggcggcgccgagggcgagcgccttgaagacgtcggt 918 Query: 413 gccgcggcggacaccgccgt 432 |||||||||||| ||||||| Sbjct: 917 gccgcggcggacgccgccgt 898
>ref|XM_473942.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1104 Score = 145 bits (73), Expect = 1e-31 Identities = 181/217 (83%) Strand = Plus / Minus Query: 216 tcggtgacgacgtggttgcgggtgatgtctgctagcgagttgcagccgctgagcgccatg 275 ||||||| |||||||||||||||||| || || ||||| |||| ||||||||||||||| Sbjct: 1073 tcggtgatgacgtggttgcgggtgatctcggccagcgacgtgcatccgctgagcgccatg 1014 Query: 276 gtcagctcgaactcgtcgcgcagcatcttgagcacgttgctcaccccggcctccccggcc 335 || ||||| | ||||||||| ||||||| ||||| || ||||| |||||||| ||| || Sbjct: 1013 gtgagctccagctcgtcgcggagcatctgcagcaccttcctcacgccggcctcgccgtcc 954 Query: 336 accgccagcgagaacaccaccggccttccgatgaagacgccggcggcgccgagagcgagc 395 || ||||||||||||| ||||||||| || || || || || | || || || || || Sbjct: 953 acggccagcgagaacagcaccggcctgccaataaatactcctgaagctcccagcgccagg 894 Query: 396 gccttgaagacgtccgtgccgcggcggacaccgccgt 432 |||||||| ||||||||||| |||||||| ||||||| Sbjct: 893 gccttgaacacgtccgtgccacggcggacgccgccgt 857
>dbj|AK068638.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013156O03, full insert sequence Length = 1435 Score = 145 bits (73), Expect = 1e-31 Identities = 181/217 (83%) Strand = Plus / Minus Query: 216 tcggtgacgacgtggttgcgggtgatgtctgctagcgagttgcagccgctgagcgccatg 275 ||||||| |||||||||||||||||| || || ||||| |||| ||||||||||||||| Sbjct: 1142 tcggtgatgacgtggttgcgggtgatctcggccagcgacgtgcatccgctgagcgccatg 1083 Query: 276 gtcagctcgaactcgtcgcgcagcatcttgagcacgttgctcaccccggcctccccggcc 335 || ||||| | ||||||||| ||||||| ||||| || ||||| |||||||| ||| || Sbjct: 1082 gtgagctccagctcgtcgcggagcatctgcagcaccttcctcacgccggcctcgccgtcc 1023 Query: 336 accgccagcgagaacaccaccggccttccgatgaagacgccggcggcgccgagagcgagc 395 || ||||||||||||| ||||||||| || || || || || | || || || || || Sbjct: 1022 acggccagcgagaacagcaccggcctgccaataaatactcctgaagctcccagcgccagg 963 Query: 396 gccttgaagacgtccgtgccgcggcggacaccgccgt 432 |||||||| ||||||||||| |||||||| ||||||| Sbjct: 962 gccttgaacacgtccgtgccacggcggacgccgccgt 926
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 133 bits (67), Expect = 5e-28 Identities = 118/135 (87%) Strand = Plus / Minus Query: 233 gcgggtgatgtctgctagcgagttgcagccgctgagcgccatggtcagctcgaactcgtc 292 |||||||||||| || |||||| |||| ||||||||||||||||| ||||||||||| || Sbjct: 32328113 gcgggtgatgtcggcgagcgaggtgcatccgctgagcgccatggtgagctcgaactcctc 32328054 Query: 293 gcgcagcatcttgagcacgttgctcaccccggcctccccggccaccgccagcgagaacac 352 |||| |||| |||||||| ||||||||||||||||| || ||||||||| |||||| Sbjct: 32328053 ccgcatcatccgcagcacgttcctcaccccggcctccccctccgccgccagcgcgaacac 32327994 Query: 353 caccggccttccgat 367 ||||||||| ||||| Sbjct: 32327993 caccggcctcccgat 32327979 Score = 105 bits (53), Expect = 1e-19 Identities = 62/65 (95%) Strand = Plus / Minus Query: 368 gaagacgccggcggcgccgagagcgagcgccttgaagacgtccgtgccgcggcggacacc 427 ||||||||||||||||||||| |||||||||||||||||||| |||||||||||||| || Sbjct: 32327888 gaagacgccggcggcgccgagggcgagcgccttgaagacgtcggtgccgcggcggacgcc 32327829 Query: 428 gccgt 432 ||||| Sbjct: 32327828 gccgt 32327824
>gb|AC133340.4| Oryza sativa chromosome 3 BAC clone OSJNBb0024J17, complete sequence Length = 102751 Score = 133 bits (67), Expect = 5e-28 Identities = 118/135 (87%) Strand = Plus / Minus Query: 233 gcgggtgatgtctgctagcgagttgcagccgctgagcgccatggtcagctcgaactcgtc 292 |||||||||||| || |||||| |||| ||||||||||||||||| ||||||||||| || Sbjct: 61880 gcgggtgatgtcggcgagcgaggtgcatccgctgagcgccatggtgagctcgaactcctc 61821 Query: 293 gcgcagcatcttgagcacgttgctcaccccggcctccccggccaccgccagcgagaacac 352 |||| |||| |||||||| ||||||||||||||||| || ||||||||| |||||| Sbjct: 61820 ccgcatcatccgcagcacgttcctcaccccggcctccccctccgccgccagcgcgaacac 61761 Query: 353 caccggccttccgat 367 ||||||||| ||||| Sbjct: 61760 caccggcctcccgat 61746 Score = 105 bits (53), Expect = 1e-19 Identities = 62/65 (95%) Strand = Plus / Minus Query: 368 gaagacgccggcggcgccgagagcgagcgccttgaagacgtccgtgccgcggcggacacc 427 ||||||||||||||||||||| |||||||||||||||||||| |||||||||||||| || Sbjct: 61655 gaagacgccggcggcgccgagggcgagcgccttgaagacgtcggtgccgcggcggacgcc 61596 Query: 428 gccgt 432 ||||| Sbjct: 61595 gccgt 61591
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 133 bits (67), Expect = 5e-28 Identities = 118/135 (87%) Strand = Plus / Minus Query: 233 gcgggtgatgtctgctagcgagttgcagccgctgagcgccatggtcagctcgaactcgtc 292 |||||||||||| || |||||| |||| ||||||||||||||||| ||||||||||| || Sbjct: 32418623 gcgggtgatgtcggcgagcgaggtgcatccgctgagcgccatggtgagctcgaactcctc 32418564 Query: 293 gcgcagcatcttgagcacgttgctcaccccggcctccccggccaccgccagcgagaacac 352 |||| |||| |||||||| ||||||||||||||||| || ||||||||| |||||| Sbjct: 32418563 ccgcatcatccgcagcacgttcctcaccccggcctccccctccgccgccagcgcgaacac 32418504 Query: 353 caccggccttccgat 367 ||||||||| ||||| Sbjct: 32418503 caccggcctcccgat 32418489 Score = 105 bits (53), Expect = 1e-19 Identities = 62/65 (95%) Strand = Plus / Minus Query: 368 gaagacgccggcggcgccgagagcgagcgccttgaagacgtccgtgccgcggcggacacc 427 ||||||||||||||||||||| |||||||||||||||||||| |||||||||||||| || Sbjct: 32418398 gaagacgccggcggcgccgagggcgagcgccttgaagacgtcggtgccgcggcggacgcc 32418339 Query: 428 gccgt 432 ||||| Sbjct: 32418338 gccgt 32418334
>emb|AL606645.2|OSJN00079 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0053K19, complete sequence Length = 187601 Score = 131 bits (66), Expect = 2e-27 Identities = 126/146 (86%) Strand = Plus / Minus Query: 216 tcggtgacgacgtggttgcgggtgatgtctgctagcgagttgcagccgctgagcgccatg 275 ||||||| |||||||||||||||||| || || ||||| |||| ||||||||||||||| Sbjct: 59399 tcggtgatgacgtggttgcgggtgatctcggccagcgacgtgcatccgctgagcgccatg 59340 Query: 276 gtcagctcgaactcgtcgcgcagcatcttgagcacgttgctcaccccggcctccccggcc 335 || ||||| | ||||||||| ||||||| ||||| || ||||| |||||||| ||| || Sbjct: 59339 gtgagctccagctcgtcgcggagcatctgcagcaccttcctcacgccggcctcgccgtcc 59280 Query: 336 accgccagcgagaacaccaccggcct 361 || ||||||||||||| ||||||||| Sbjct: 59279 acggccagcgagaacagcaccggcct 59254 Score = 52.0 bits (26), Expect = 0.002 Identities = 86/106 (81%) Strand = Plus / Minus Query: 256 tgcagccgctgagcgccatggtcagctcgaactcgtcgcgcagcatcttgagcacgttgc 315 |||||||||||||||||||||| | ||| | |||||| | ||||||| ||| |||| | Sbjct: 63427 tgcagccgctgagcgccatggtgatctccagctcgtctctcagcatccgcagcgcgttcc 63368 Query: 316 tcaccccggcctccccggccaccgccagcgagaacaccaccggcct 361 |||| |||||||| ||| | | || || ||||||| ||||||||| Sbjct: 63367 tcacgccggcctcgccgtcgatggcgagggagaacagcaccggcct 63322 Score = 50.1 bits (25), Expect = 0.006 Identities = 34/37 (91%) Strand = Plus / Minus Query: 396 gccttgaagacgtccgtgccgcggcggacaccgccgt 432 |||||||| ||||||||||| |||||||| ||||||| Sbjct: 59124 gccttgaacacgtccgtgccacggcggacgccgccgt 59088
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 131 bits (66), Expect = 2e-27 Identities = 126/146 (86%) Strand = Plus / Minus Query: 216 tcggtgacgacgtggttgcgggtgatgtctgctagcgagttgcagccgctgagcgccatg 275 ||||||| |||||||||||||||||| || || ||||| |||| ||||||||||||||| Sbjct: 31726129 tcggtgatgacgtggttgcgggtgatctcggccagcgacgtgcatccgctgagcgccatg 31726070 Query: 276 gtcagctcgaactcgtcgcgcagcatcttgagcacgttgctcaccccggcctccccggcc 335 || ||||| | ||||||||| ||||||| ||||| || ||||| |||||||| ||| || Sbjct: 31726069 gtgagctccagctcgtcgcggagcatctgcagcaccttcctcacgccggcctcgccgtcc 31726010 Query: 336 accgccagcgagaacaccaccggcct 361 || ||||||||||||| ||||||||| Sbjct: 31726009 acggccagcgagaacagcaccggcct 31725984 Score = 52.0 bits (26), Expect = 0.002 Identities = 86/106 (81%) Strand = Plus / Minus Query: 256 tgcagccgctgagcgccatggtcagctcgaactcgtcgcgcagcatcttgagcacgttgc 315 |||||||||||||||||||||| | ||| | |||||| | ||||||| ||| |||| | Sbjct: 31730157 tgcagccgctgagcgccatggtgatctccagctcgtctctcagcatccgcagcgcgttcc 31730098 Query: 316 tcaccccggcctccccggccaccgccagcgagaacaccaccggcct 361 |||| |||||||| ||| | | || || ||||||| ||||||||| Sbjct: 31730097 tcacgccggcctcgccgtcgatggcgagggagaacagcaccggcct 31730052 Score = 50.1 bits (25), Expect = 0.006 Identities = 34/37 (91%) Strand = Plus / Minus Query: 396 gccttgaagacgtccgtgccgcggcggacaccgccgt 432 |||||||| ||||||||||| |||||||| ||||||| Sbjct: 31725854 gccttgaacacgtccgtgccacggcggacgccgccgt 31725818
>dbj|AK060221.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-002-F07, full insert sequence Length = 1427 Score = 131 bits (66), Expect = 2e-27 Identities = 126/146 (86%) Strand = Plus / Minus Query: 216 tcggtgacgacgtggttgcgggtgatgtctgctagcgagttgcagccgctgagcgccatg 275 ||||||| |||||||||||||||||| || || ||||| |||| ||||||||||||||| Sbjct: 1146 tcggtgatgacgtggttgcgggtgatctcggccagcgacgtgcatccgctgagcgccatg 1087 Query: 276 gtcagctcgaactcgtcgcgcagcatcttgagcacgttgctcaccccggcctccccggcc 335 || ||||| | ||||||||| ||||||| ||||| || ||||| |||||||| ||| || Sbjct: 1086 gtgagctccagctcgtcgcggagcatctgcagcaccttcctcacgccggcctcgccgtcc 1027 Query: 336 accgccagcgagaacaccaccggcct 361 || ||||||||||||| ||||||||| Sbjct: 1026 acggccagcgagaacagcaccggcct 1001 Score = 50.1 bits (25), Expect = 0.006 Identities = 34/37 (91%) Strand = Plus / Minus Query: 396 gccttgaagacgtccgtgccgcggcggacaccgccgt 432 |||||||| ||||||||||| |||||||| ||||||| Sbjct: 972 gccttgaacacgtccgtgccacggcggacgccgccgt 936
>gb|AE007214.1| Sinorhizobium meliloti 1021 plasmid pSymA section 20 of 121 of the complete plasmid sequence Length = 12359 Score = 65.9 bits (33), Expect = 1e-07 Identities = 54/61 (88%) Strand = Plus / Minus Query: 372 acgccggcggcgccgagagcgagcgccttgaagacgtccgtgccgcggcggacaccgccg 431 |||||| | |||||||| |||| |||||||| |||||||| ||||||||||| ||||||| Sbjct: 11993 acgccgtctgcgccgagtgcgatcgccttgatgacgtccgcgccgcggcggataccgccg 11934 Query: 432 t 432 | Sbjct: 11933 t 11933
>gb|AF386507.1|AF386507 Streptomyces lavendulae complestatin biosynthetic gene cluster, complete sequence Length = 55972 Score = 63.9 bits (32), Expect = 4e-07 Identities = 49/55 (89%) Strand = Plus / Plus Query: 384 ccgagagcgagcgccttgaagacgtccgtgccgcggcggacaccgccgtncagga 438 ||||| ||||| ||||||| |||||||||||||| ||| |||||||||| ||||| Sbjct: 44018 ccgagggcgagggccttgaggacgtccgtgccgctgcgcacaccgccgtccagga 44072
>gb|AY173074.1| Zantedeschia aethiopica glycolate oxidase (gox) mRNA, complete cds Length = 1486 Score = 56.0 bits (28), Expect = 1e-04 Identities = 118/148 (79%) Strand = Plus / Minus Query: 214 cctcggtgacgacgtggttgcgggtgatgtctgctagcgagttgcagccgctgagcgcca 273 |||| |||| || ||||||||| |||||||| |||||| ||| || ||||| |||| Sbjct: 1171 cctcagtgaggatgtggttgcgtgtgatgtccttgagcgagaggcatccactgagtgcca 1112 Query: 274 tggtcagctcgaactcgtcgcgcagcatcttgagcacgttgctcaccccggcctccccgg 333 |||| ||||||||||| ||||| ||||| | ||||| || ||||| || ||||| || Sbjct: 1111 tggtgagctcgaactcctcgcggagcatttgaagcaccttcctcacaccagcctcacctt 1052 Query: 334 ccaccgccagcgagaacaccaccggcct 361 || | |||| ||||||||||||||||| Sbjct: 1051 ccgcagccaaagagaacaccaccggcct 1024
>emb|AL939106.1|SCO939106 Streptomyces coelicolor A3(2) complete genome; segment 3/29 Length = 314100 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Minus Query: 380 ggcgccgagagcgagcgccttgaagacgtccgtgccgcggcggacaccgc 429 ||||||||| |||||||||||||||||||| |||| ||||||||||| Sbjct: 218011 ggcgccgagcgcgagcgccttgaagacgtcgtcgccggtgcggacaccgc 217962
>dbj|AK068129.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013131A08, full insert sequence Length = 1986 Score = 52.0 bits (26), Expect = 0.002 Identities = 86/106 (81%) Strand = Plus / Minus Query: 256 tgcagccgctgagcgccatggtcagctcgaactcgtcgcgcagcatcttgagcacgttgc 315 |||||||||||||||||||||| | ||| | |||||| | ||||||| ||| |||| | Sbjct: 1620 tgcagccgctgagcgccatggtgatctccagctcgtctctcagcatccgcagcgcgttcc 1561 Query: 316 tcaccccggcctccccggccaccgccagcgagaacaccaccggcct 361 |||| |||||||| ||| | | || || ||||||| ||||||||| Sbjct: 1560 tcacgccggcctcgccgtcgatggcgagggagaacagcaccggcct 1515
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 46.1 bits (23), Expect = 0.098 Identities = 37/42 (88%) Strand = Plus / Minus Query: 395 cgccttgaagacgtccgtgccgcggcggacaccgccgtncag 436 |||||||| |||||| ||||||| ||||||||||||| ||| Sbjct: 4632810 cgccttgacgacgtcgctgccgcgccggacaccgccgtccag 4632769 Score = 40.1 bits (20), Expect = 6.1 Identities = 38/44 (86%) Strand = Plus / Plus Query: 380 ggcgccgagagcgagcgccttgaagacgtccgtgccgcggcgga 423 |||||| || ||||||||||||| |||||| | ||||| ||||| Sbjct: 3292386 ggcgcccagcgcgagcgccttgacgacgtcggcgccgctgcgga 3292429 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 318 accccggcctccccggccaccgcc 341 ||||||||||| |||||||||||| Sbjct: 476541 accccggcctcgccggccaccgcc 476518
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence Length = 3181762 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 372 acgccggcggcgccgagagcgagcgc 397 ||||||||||||||||| |||||||| Sbjct: 1139720 acgccggcggcgccgagcgcgagcgc 1139695
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence Length = 3173005 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 372 acgccggcggcgccgagagcgagcgc 397 ||||||||||||||||| |||||||| Sbjct: 2455634 acgccggcggcgccgagcgcgagcgc 2455609
>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence Length = 2325379 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 372 acgccggcggcgccgagagcgagcgc 397 ||||||||||||||||| |||||||| Sbjct: 278835 acgccggcggcgccgagcgcgagcgc 278860
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 198 acgccgaatttgtcggcctcg 218 ||||||||||||||||||||| Sbjct: 106751 acgccgaatttgtcggcctcg 106771
>emb|BX572598.1| Rhodopseudomonas palustris CGA009 complete genome; segment 6/16 Length = 346879 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 376 cggcggcgccgagagcgagcgccttgaag 404 ||||||||||||| | ||||||||||||| Sbjct: 65451 cggcggcgccgagcgagagcgccttgaag 65423
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 42.1 bits (21), Expect = 1.5 Identities = 54/65 (83%) Strand = Plus / Minus Query: 368 gaagacgccggcggcgccgagagcgagcgccttgaagacgtccgtgccgcggcggacacc 427 |||||| || ||||||||||| || |||||||||| ||||| |||| || |||||||| Sbjct: 2791368 gaagacccctgcggcgccgagggccagcgccttgaccacgtcgttgcctcgccggacacc 2791309 Query: 428 gccgt 432 |||| Sbjct: 2791308 tccgt 2791304
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 94 atcatgcatggatgcccttac 114 ||||||||||||||||||||| Sbjct: 41232292 atcatgcatggatgcccttac 41232272
>dbj|AP003412.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1150F11 Length = 130355 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 94 atcatgcatggatgcccttac 114 ||||||||||||||||||||| Sbjct: 49207 atcatgcatggatgcccttac 49187
>dbj|AP003269.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0504E02 Length = 137468 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 94 atcatgcatggatgcccttac 114 ||||||||||||||||||||| Sbjct: 129347 atcatgcatggatgcccttac 129327
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 381 gcgccgagagcgagcgccttgaaga 405 |||||||| |||||||||||||||| Sbjct: 8916298 gcgccgagcgcgagcgccttgaaga 8916322
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 209 gtcggcctcggtgacgacgtggttg 233 ||||||||||||||||| ||||||| Sbjct: 760046 gtcggcctcggtgacgaggtggttg 760022
>ref|NM_180253.1| Arabidopsis thaliana glycolate oxidase/ oxidoreductase AT3G14420 transcript variant AT3G14420.2 mRNA, complete cds Length = 1494 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 270 gccatggtcagctcgaactc 289 |||||||||||||||||||| Sbjct: 1127 gccatggtcagctcgaactc 1108
>ref|NM_180254.1| Arabidopsis thaliana glycolate oxidase/ oxidoreductase AT3G14420 transcript variant AT3G14420.3 mRNA, complete cds Length = 1586 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 270 gccatggtcagctcgaactc 289 |||||||||||||||||||| Sbjct: 1219 gccatggtcagctcgaactc 1200
>ref|NM_001035617.1| Arabidopsis thaliana glycolate oxidase/ oxidoreductase AT3G14420 transcript variant AT3G14420.4 mRNA, complete cds Length = 1482 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 270 gccatggtcagctcgaactc 289 |||||||||||||||||||| Sbjct: 1115 gccatggtcagctcgaactc 1096
>ref|NM_112302.2| Arabidopsis thaliana glycolate oxidase/ oxidoreductase AT3G14420 transcript variant AT3G14420.1 mRNA, complete cds Length = 1453 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 270 gccatggtcagctcgaactc 289 |||||||||||||||||||| Sbjct: 1086 gccatggtcagctcgaactc 1067
>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence Length = 3587082 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 275 ggtcagctcgaactcgtcgc 294 |||||||||||||||||||| Sbjct: 1801278 ggtcagctcgaactcgtcgc 1801297
>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome Length = 2584158 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 322 cggcctccccggccaccgccagcg 345 |||||||||||||||||| ||||| Sbjct: 627800 cggcctccccggccaccgtcagcg 627823
>gb|AY596544.1| Saccharum officinarum clone SCCCCL3140E04, complete sequence Length = 1525 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 278 cagctcgaactcgtcgcgcagcatcttg 305 |||| ||||| ||||||||||||||||| Sbjct: 1019 cagcccgaacgcgtcgcgcagcatcttg 992
>gb|CP000058.1| Pseudomonas syringae pv. phaseolicola 1448A, complete genome Length = 5928787 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 282 tcgaactcgtcgcgcagcatcttg 305 |||| ||||||||||||||||||| Sbjct: 151834 tcgatctcgtcgcgcagcatcttg 151857
>gb|AY665713.1| Equine herpesvirus 1 strain Ab4, complete genome Length = 150224 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 373 cgccggcggcgccgagagcgagcg 396 ||||||||||||||||| |||||| Sbjct: 63931 cgccggcggcgccgagaacgagcg 63908
>emb|AL138960.16| Human DNA sequence from clone RP11-269C23 on chromosome 13, complete sequence Length = 144836 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 377 ggcggcgccgagagcgagcg 396 |||||||||||||||||||| Sbjct: 121859 ggcggcgccgagagcgagcg 121840
>gb|AY464052.1| Equine herpesvirus 1 strain V592, complete genome Length = 149430 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 373 cgccggcggcgccgagagcgagcg 396 ||||||||||||||||| |||||| Sbjct: 63865 cgccggcggcgccgagaacgagcg 63842
>emb|Z98745.1|HS29K1 Human DNA sequence from clone RP1-29K1 on chromosome 6p21.3-22.2. Contains the gene for KIAA0426 (C2H2 type zinc finger protein), the gene for a novel C2H2 type zinc finger protein, a COX11 (COX11 (yeast) homolog, cytochrome c oxidase assembly protein) pseudogene, the olfactory receptor 2E1 pseudogene OR2E1P, the 3' end of a glutathion peroxidase pseudogene, ESTs, STSs, GSS and three CpG islands, complete sequence Length = 128779 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 377 ggcggcgccgagagcgagcg 396 |||||||||||||||||||| Sbjct: 88520 ggcggcgccgagagcgagcg 88539
>emb|AJ867403.1| Zea mays mRNA for glycosyltransferase (a4 gene) Length = 1514 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 278 cagctcgaactcgtcgcgcagcatcttg 305 |||| ||||| ||||||||||||||||| Sbjct: 915 cagcccgaacgcgtcgcgcagcatcttg 888
>emb|AJ867402.1| Saccharum officinarum mRNA for glycosyltransferase (a4 gene) Length = 1580 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 278 cagctcgaactcgtcgcgcagcatcttg 305 |||| ||||| ||||||||||||||||| Sbjct: 998 cagcccgaacgcgtcgcgcagcatcttg 971
>emb|AJ867401.1| Sorghum bicolor mRNA for glycosyltransferase (a4 gene) Length = 1476 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 278 cagctcgaactcgtcgcgcagcatcttg 305 |||| ||||| ||||||||||||||||| Sbjct: 894 cagcccgaacgcgtcgcgcagcatcttg 867
>gb|U82965.2|STU82965 Streptomcyes toyocaensis strain NRRL 15009 biosynthetic gene cluster A47934, complete sequence Length = 69301 Score = 40.1 bits (20), Expect = 6.1 Identities = 35/40 (87%) Strand = Plus / Minus Query: 384 ccgagagcgagcgccttgaagacgtccgtgccgcggcgga 423 ||||||||||||||| ||| ||||| ||||||| ||||| Sbjct: 58406 ccgagagcgagcgccctgagcacgtcggtgccgctgcgga 58367
>gb|AY081566.1| Arabidopsis thaliana glycolate oxidase (At3g14420) mRNA, complete cds Length = 577 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 270 gccatggtcagctcgaactc 289 |||||||||||||||||||| Sbjct: 446 gccatggtcagctcgaactc 427
>gb|AY074830.1| Arabidopsis thaliana AT3g14420/MOA2_2 mRNA, complete cds Length = 1104 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 270 gccatggtcagctcgaactc 289 |||||||||||||||||||| Sbjct: 1016 gccatggtcagctcgaactc 997
>gb|AY065122.1| Arabidopsis thaliana glycolate oxidase (At3g14420; MOA2.2) mRNA, complete cds Length = 1032 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 270 gccatggtcagctcgaactc 289 |||||||||||||||||||| Sbjct: 691 gccatggtcagctcgaactc 672
>gb|AF428328.1|AF428328 Arabidopsis thaliana AT3g14420/MOA2_2 mRNA, complete cds Length = 1356 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 270 gccatggtcagctcgaactc 289 |||||||||||||||||||| Sbjct: 1069 gccatggtcagctcgaactc 1050
>gb|AF428396.1|AF428396 Arabidopsis thaliana AT3g14420/MOA2_2 mRNA, complete cds Length = 1377 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 270 gccatggtcagctcgaactc 289 |||||||||||||||||||| Sbjct: 1062 gccatggtcagctcgaactc 1043
>dbj|AK220934.1| Arabidopsis thaliana mRNA for glycolate oxidase like protein, partial cds, clone: RAFL22-51-H24 Length = 438 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 270 gccatggtcagctcgaactc 289 |||||||||||||||||||| Sbjct: 156 gccatggtcagctcgaactc 137
>gb|AY053412.1| Arabidopsis thaliana AT3g14420/MOA2_2 mRNA, complete cds Length = 1427 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 270 gccatggtcagctcgaactc 289 |||||||||||||||||||| Sbjct: 1067 gccatggtcagctcgaactc 1048
>gb|AC005678.1|AC005678 Homo sapiens PAC clone RP11-569I24 from 7, complete sequence Length = 187543 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 377 ggcggcgccgagagcgagcg 396 |||||||||||||||||||| Sbjct: 133551 ggcggcgccgagagcgagcg 133570
>gb|DQ230532.1| Streptomyces sp. Tu6071 phenalinolactone biosynthetic gene cluster, complete sequence Length = 49461 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 375 ccggcggcgccgagagcgag 394 |||||||||||||||||||| Sbjct: 33029 ccggcggcgccgagagcgag 33010
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 265 tgagcgccatggtcagctcg 284 |||||||||||||||||||| Sbjct: 397777 tgagcgccatggtcagctcg 397758
>gb|AC158471.2| Postia placenta clone JGIACWS-5E20, complete sequence Length = 43397 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 384 ccgagagcgagcgccttgaagacgtccg 411 ||||||||||| |||||||| ||||||| Sbjct: 11766 ccgagagcgagtgccttgaacacgtccg 11739
>dbj|AB028617.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone:MOA2 Length = 52232 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 270 gccatggtcagctcgaactc 289 |||||||||||||||||||| Sbjct: 4003 gccatggtcagctcgaactc 3984
>gb|AF061070.1|AF061070 Pseudomonas stutzeri Orf117 (orf117), Orf86 (orf86) genes, complete cds; and ptxABCDE operon, partial sequence Length = 5644 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 332 ggccaccgccagcgagaacaccac 355 ||||||| |||||||||||||||| Sbjct: 3534 ggccaccaccagcgagaacaccac 3511
>emb|X95377.1|EHV1GP14G Equine herpesvirus type 1 gp14 gene (RacH strain) Length = 3002 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 373 cgccggcggcgccgagagcgagcg 396 ||||||||||||||||| |||||| Sbjct: 2500 cgccggcggcgccgagaacgagcg 2477
>emb|X95374.1|EHVGP14GB Equine herpesvirus type 1 gp14 gene (Racl11 strain) Length = 3005 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 373 cgccggcggcgccgagagcgagcg 396 ||||||||||||||||| |||||| Sbjct: 2500 cgccggcggcgccgagaacgagcg 2477
>gb|M35145.1|HSE14GP Equine herpesvirus type 1 glycoprotein 14 (gp14) gene, complete cds Length = 3351 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 373 cgccggcggcgccgagagcgagcg 396 ||||||||||||||||| |||||| Sbjct: 2799 cgccggcggcgccgagaacgagcg 2776
>dbj|D00401.1|HSE1GB Equine herpesvirus 1 genes for analogous ORF to HSV1 ICP18.5 and equivalent to the gB glycoprotein gene of HSV, partial and complete cds Length = 4283 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 373 cgccggcggcgccgagagcgagcg 396 ||||||||||||||||| |||||| Sbjct: 3450 cgccggcggcgccgagaacgagcg 3427 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,657,400 Number of Sequences: 3902068 Number of extensions: 2657400 Number of successful extensions: 55309 Number of sequences better than 10.0: 71 Number of HSP's better than 10.0 without gapping: 71 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 53652 Number of HSP's gapped (non-prelim): 1655 length of query: 451 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 429 effective length of database: 17,147,199,772 effective search space: 7356148702188 effective search space used: 7356148702188 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)