>emb|AL365258.24| Human DNA sequence from clone RP11-448G4 on chromosome 1 Contains the
5' end of a novel gene, a eukaryotic translation
elongation factor 1 alpha (EEF1A) pseudogene, a novel
pseudogene, a novel gene and a ribosomal protein L24
(RPL24) pseudogene, complete sequence
Length = 129343
Score = 40.1 bits (20), Expect = 8.8
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 290 ttaccaaaatggtagctgct 309
||||||||||||||||||||
Sbjct: 64705 ttaccaaaatggtagctgct 64724
>emb|AL589699.4| Mouse DNA sequence from clone RP23-92G13 on chromosome 13 Contains the
3' end of the gene for a novel protein similar to
KIAA0386, five novel genes, the Gmnn gene for geminin,
gene PNAS-27, the Ttrap gene for Traf and Tnf receptor
associated protein, the gene for a novel protein similar
to KIAA0319, the gene for the ortholog of human and rat
aldehyde dehydrogenase 5A1 (succinate-semialdehyde
dehydrogenase) (ALDH5A1) (SSADH), the 5' end of the Gpld1
gene for glycosylphosphatidylinositol specific
phospholipase D1 and four CpG islands, complete sequence
Length = 256608
Score = 40.1 bits (20), Expect = 8.8
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 575 aattaatttcacatcttttg 594
||||||||||||||||||||
Sbjct: 28316 aattaatttcacatcttttg 28335
>gb|BC060202.1| Mus musculus RIKEN cDNA 6330500D04 gene, mRNA (cDNA clone
IMAGE:6854098), partial cds
Length = 2789
Score = 40.1 bits (20), Expect = 8.8
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 575 aattaatttcacatcttttg 594
||||||||||||||||||||
Sbjct: 2641 aattaatttcacatcttttg 2660
Database: nt
Posted date: May 29, 2006 11:10 AM
Number of letters in database: 3,984,495,279
Number of sequences in database: 917,343
Database: /shigen/export/home/twatanab/db/nt/nt.01
Posted date: May 29, 2006 11:16 AM
Number of letters in database: 3,988,174,986
Number of sequences in database: 835,257
Database: /shigen/export/home/twatanab/db/nt/nt.02
Posted date: May 29, 2006 11:21 AM
Number of letters in database: 3,991,246,324
Number of sequences in database: 771,481
Database: /shigen/export/home/twatanab/db/nt/nt.03
Posted date: May 29, 2006 11:27 AM
Number of letters in database: 3,990,718,311
Number of sequences in database: 977,174
Database: /shigen/export/home/twatanab/db/nt/nt.04
Posted date: May 29, 2006 11:29 AM
Number of letters in database: 1,278,410,368
Number of sequences in database: 400,813
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,193,288
Number of Sequences: 3902068
Number of extensions: 5193288
Number of successful extensions: 89747
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 89629
Number of HSP's gapped (non-prelim): 118
length of query: 642
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 619
effective length of database: 17,143,297,704
effective search space: 10611701278776
effective search space used: 10611701278776
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)