Clone Name | rbah62a23 |
---|---|
Clone Library Name | barley_pub |
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 262 bits (132), Expect = 1e-66 Identities = 198/220 (90%) Strand = Plus / Minus Query: 334 ttcagaatctctcgccaaatctgaagaagacggttccagccccagtgttgtgatctacaa 393 |||| ||||||||||||||||||||||| || ||||||| |||| ||||||||||| | Sbjct: 9045718 ttcaaaatctctcgccaaatctgaagaaaactgttccagtaccagcattgtgatctacga 9045659 Query: 394 tgtactctcctcttaccaagccaagcttgacgccaacaccatatgacgatccatggccaa 453 |||||||||| ||||||||||||||||||||||||| ||||||||| || ||||| |||| Sbjct: 9045658 tgtactctccccttaccaagccaagcttgacgccaagaccatatgatgacccatgaccaa 9045599 Query: 454 cccgtcggaagaactcagtagggttccctttcacgtccttggaactcccaaggtcggtgc 513 |||||||||||||||| || |||||||||||||| ||||||||||| |||||||| |||| Sbjct: 9045598 cccgtcggaagaactctgtggggttccctttcacatccttggaactgccaaggtcagtgc 9045539 Query: 514 catgttcagcaaaaccataaacatatgtgttcttcacagg 553 |||||||| |||| ||||| |||||||||||| ||||||| Sbjct: 9045538 catgttcaacaaatccatacacatatgtgttcctcacagg 9045499
>gb|AC135207.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1261C08, complete sequence Length = 99910 Score = 262 bits (132), Expect = 1e-66 Identities = 198/220 (90%) Strand = Plus / Minus Query: 334 ttcagaatctctcgccaaatctgaagaagacggttccagccccagtgttgtgatctacaa 393 |||| ||||||||||||||||||||||| || ||||||| |||| ||||||||||| | Sbjct: 52754 ttcaaaatctctcgccaaatctgaagaaaactgttccagtaccagcattgtgatctacga 52695 Query: 394 tgtactctcctcttaccaagccaagcttgacgccaacaccatatgacgatccatggccaa 453 |||||||||| ||||||||||||||||||||||||| ||||||||| || ||||| |||| Sbjct: 52694 tgtactctccccttaccaagccaagcttgacgccaagaccatatgatgacccatgaccaa 52635 Query: 454 cccgtcggaagaactcagtagggttccctttcacgtccttggaactcccaaggtcggtgc 513 |||||||||||||||| || |||||||||||||| ||||||||||| |||||||| |||| Sbjct: 52634 cccgtcggaagaactctgtggggttccctttcacatccttggaactgccaaggtcagtgc 52575 Query: 514 catgttcagcaaaaccataaacatatgtgttcttcacagg 553 |||||||| |||| ||||| |||||||||||| ||||||| Sbjct: 52574 catgttcaacaaatccatacacatatgtgttcctcacagg 52535
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 262 bits (132), Expect = 1e-66 Identities = 198/220 (90%) Strand = Plus / Minus Query: 334 ttcagaatctctcgccaaatctgaagaagacggttccagccccagtgttgtgatctacaa 393 |||| ||||||||||||||||||||||| || ||||||| |||| ||||||||||| | Sbjct: 9043551 ttcaaaatctctcgccaaatctgaagaaaactgttccagtaccagcattgtgatctacga 9043492 Query: 394 tgtactctcctcttaccaagccaagcttgacgccaacaccatatgacgatccatggccaa 453 |||||||||| ||||||||||||||||||||||||| ||||||||| || ||||| |||| Sbjct: 9043491 tgtactctccccttaccaagccaagcttgacgccaagaccatatgatgacccatgaccaa 9043432 Query: 454 cccgtcggaagaactcagtagggttccctttcacgtccttggaactcccaaggtcggtgc 513 |||||||||||||||| || |||||||||||||| ||||||||||| |||||||| |||| Sbjct: 9043431 cccgtcggaagaactctgtggggttccctttcacatccttggaactgccaaggtcagtgc 9043372 Query: 514 catgttcagcaaaaccataaacatatgtgttcttcacagg 553 |||||||| |||| ||||| |||||||||||| ||||||| Sbjct: 9043371 catgttcaacaaatccatacacatatgtgttcctcacagg 9043332
>dbj|AK120241.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013044F20, full insert sequence Length = 3072 Score = 262 bits (132), Expect = 1e-66 Identities = 198/220 (90%) Strand = Plus / Minus Query: 334 ttcagaatctctcgccaaatctgaagaagacggttccagccccagtgttgtgatctacaa 393 |||| ||||||||||||||||||||||| || ||||||| |||| ||||||||||| | Sbjct: 2565 ttcaaaatctctcgccaaatctgaagaaaactgttccagtaccagcattgtgatctacga 2506 Query: 394 tgtactctcctcttaccaagccaagcttgacgccaacaccatatgacgatccatggccaa 453 |||||||||| ||||||||||||||||||||||||| ||||||||| || ||||| |||| Sbjct: 2505 tgtactctccccttaccaagccaagcttgacgccaagaccatatgatgacccatgaccaa 2446 Query: 454 cccgtcggaagaactcagtagggttccctttcacgtccttggaactcccaaggtcggtgc 513 |||||||||||||||| || |||||||||||||| ||||||||||| |||||||| |||| Sbjct: 2445 cccgtcggaagaactctgtggggttccctttcacatccttggaactgccaaggtcagtgc 2386 Query: 514 catgttcagcaaaaccataaacatatgtgttcttcacagg 553 |||||||| |||| ||||| |||||||||||| ||||||| Sbjct: 2385 catgttcaacaaatccatacacatatgtgttcctcacagg 2346
>dbj|AK062000.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-043-D04, full insert sequence Length = 1561 Score = 254 bits (128), Expect = 3e-64 Identities = 197/220 (89%) Strand = Plus / Minus Query: 334 ttcagaatctctcgccaaatctgaagaagacggttccagccccagtgttgtgatctacaa 393 |||| |||| |||||||||||||||||| || ||||||| |||| ||||||||||| | Sbjct: 1131 ttcaaaatccctcgccaaatctgaagaaaactgttccagtaccagcattgtgatctacga 1072 Query: 394 tgtactctcctcttaccaagccaagcttgacgccaacaccatatgacgatccatggccaa 453 |||||||||| ||||||||||||||||||||||||| ||||||||| || ||||| |||| Sbjct: 1071 tgtactctccccttaccaagccaagcttgacgccaagaccatatgatgacccatgaccaa 1012 Query: 454 cccgtcggaagaactcagtagggttccctttcacgtccttggaactcccaaggtcggtgc 513 |||||||||||||||| || |||||||||||||| ||||||||||| |||||||| |||| Sbjct: 1011 cccgtcggaagaactctgtggggttccctttcacatccttggaactgccaaggtcagtgc 952 Query: 514 catgttcagcaaaaccataaacatatgtgttcttcacagg 553 |||||||| |||| ||||| |||||||||||| ||||||| Sbjct: 951 catgttcaacaaatccatacacatatgtgttcctcacagg 912
>ref|NM_187508.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 3822 Score = 182 bits (92), Expect = 8e-43 Identities = 131/144 (90%) Strand = Plus / Minus Query: 410 caagccaagcttgacgccaacaccatatgacgatccatggccaacccgtcggaagaactc 469 |||||||||||||||||||| ||||||||| || ||||| |||||||||||||||||||| Sbjct: 2379 caagccaagcttgacgccaagaccatatgatgacccatgaccaacccgtcggaagaactc 2320 Query: 470 agtagggttccctttcacgtccttggaactcccaaggtcggtgccatgttcagcaaaacc 529 || |||||||||||||| ||||||||||| |||||||| |||||||||||| |||| || Sbjct: 2319 tgtggggttccctttcacatccttggaactgccaaggtcagtgccatgttcaacaaatcc 2260 Query: 530 ataaacatatgtgttcttcacagg 553 ||| |||||||||||| ||||||| Sbjct: 2259 atacacatatgtgttcctcacagg 2236
>gb|BT024136.1| Zea mays clone EL01N0445G05 mRNA sequence Length = 1753 Score = 182 bits (92), Expect = 8e-43 Identities = 164/188 (87%) Strand = Plus / Minus Query: 339 aatctctcgccaaatctgaagaagacggttccagccccagtgttgtgatctacaatgtac 398 |||||||| ||||||||||| || ||||| |||| |||| ||||||||||| |||||| Sbjct: 1493 aatctctcaccaaatctgaaaaaaacggtcccagtaccagcattgtgatctacgatgtac 1434 Query: 399 tctcctcttaccaagccaagcttgacgccaacaccatatgacgatccatggccaacccgt 458 ||||| |||||||| ||||||||||||||||| |||||||| |||||||| || || || Sbjct: 1433 tctccccttaccaacccaagcttgacgccaacgccatatgaagatccatgacctacgcgc 1374 Query: 459 cggaagaactcagtagggttccctttcacgtccttggaactcccaaggtcggtgccatgt 518 | ||| ||||| |||||||| |||||||||||||||||||| |||||||| || |||||| Sbjct: 1373 ctgaaaaactccgtagggtttcctttcacgtccttggaacttccaaggtcagtcccatgt 1314 Query: 519 tcagcaaa 526 |||||||| Sbjct: 1313 tcagcaaa 1306
>gb|AY112579.1| Zea mays CL10149_-1 mRNA sequence Length = 549 Score = 149 bits (75), Expect = 1e-32 Identities = 154/182 (84%) Strand = Plus / Plus Query: 339 aatctctcgccaaatctgaagaagacggttccagccccagtgttgtgatctacaatgtac 398 |||||||| |||||||||||||| | ||||||| |||| ||||||||||||||| || Sbjct: 205 aatctctcaccaaatctgaagaaaatagttccagtaccagcattgtgatctacaatggac 264 Query: 399 tctcctcttaccaagccaagcttgacgccaacaccatatgacgatccatggccaacccgt 458 ||||| |||||||| ||||||||||| |||||||||||||| |||||||| ||||| || Sbjct: 265 tctccccttaccaacccaagcttgacaccaacaccatatgaagatccatgaccaacacgc 324 Query: 459 cggaagaactcagtagggttccctttcacgtccttggaactcccaaggtcggtgccatgt 518 | | ||| |||||||||||||| || |||||||||||||||||| | || |||||| Sbjct: 325 ctgnnnnnctctgtagggttccctttgacatccttggaactcccaagggcagtcccatgt 384 Query: 519 tc 520 || Sbjct: 385 tc 386
>gb|AY111022.1| Zea mays CL10149_2 mRNA sequence Length = 557 Score = 145 bits (73), Expect = 2e-31 Identities = 158/188 (84%) Strand = Plus / Plus Query: 339 aatctctcgccaaatctgaagaagacggttccagccccagtgttgtgatctacaatgtac 398 |||||||| |||||||||||||| | ||||||| |||| ||||||||||| |||||| Sbjct: 280 aatctctcaccaaatctgaagaaaatagttccagtaccagcattgtgatctacgatgtac 339 Query: 399 tctcctcttaccaagccaagcttgacgccaacaccatatgacgatccatggccaacccgt 458 ||||| |||||||| ||||||||||||||||| |||||||| |||||||| || || || Sbjct: 340 tctccccttaccaacccaagcttgacgccaacgccatatgaagatccatgacctacgcgc 399 Query: 459 cggaagaactcagtagggttccctttcacgtccttggaactcccaaggtcggtgccatgt 518 | | ||| |||||||| ||||| |||||||||||||| |||||| | || |||||| Sbjct: 400 ctgnnnnnctccgtagggtttcctttgacgtccttggaacttccaagggcagtcccatgt 459 Query: 519 tcagcaaa 526 |||||||| Sbjct: 460 tcagcaaa 467
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 121 bits (61), Expect = 3e-24 Identities = 100/113 (88%) Strand = Plus / Plus Query: 414 ccaagcttgacgccaacaccatatgacgatccatggccaacccgtcggaagaactcagta 473 ||||||||||| ||||| ||||| || || ||||||||||| |||| ||| ||||||||| Sbjct: 779126 ccaagcttgacaccaacgccataggatgagccatggccaacacgtctgaaaaactcagta 779185 Query: 474 gggttccctttcacgtccttggaactcccaaggtcggtgccatgttcagcaaa 526 |||||||||||||| |||||||| |||||||| || |||||||| |||||||| Sbjct: 779186 gggttccctttcacatccttggagctcccaagatcagtgccatgctcagcaaa 779238
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 121 bits (61), Expect = 3e-24 Identities = 100/113 (88%) Strand = Plus / Plus Query: 414 ccaagcttgacgccaacaccatatgacgatccatggccaacccgtcggaagaactcagta 473 ||||||||||| ||||| ||||| || || ||||||||||| |||| ||| ||||||||| Sbjct: 779126 ccaagcttgacaccaacgccataggatgagccatggccaacacgtctgaaaaactcagta 779185 Query: 474 gggttccctttcacgtccttggaactcccaaggtcggtgccatgttcagcaaa 526 |||||||||||||| |||||||| |||||||| || |||||||| |||||||| Sbjct: 779186 gggttccctttcacatccttggagctcccaagatcagtgccatgctcagcaaa 779238
>emb|BX842244.3|CNS0B0PN Oryza sativa chromosome 12, . Partial sequence from BAC OSJNBb0006G23 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 12281 Score = 121 bits (61), Expect = 3e-24 Identities = 100/113 (88%) Strand = Plus / Plus Query: 414 ccaagcttgacgccaacaccatatgacgatccatggccaacccgtcggaagaactcagta 473 ||||||||||| ||||| ||||| || || ||||||||||| |||| ||| ||||||||| Sbjct: 898 ccaagcttgacaccaacgccataggatgagccatggccaacacgtctgaaaaactcagta 957 Query: 474 gggttccctttcacgtccttggaactcccaaggtcggtgccatgttcagcaaa 526 |||||||||||||| |||||||| |||||||| || |||||||| |||||||| Sbjct: 958 gggttccctttcacatccttggagctcccaagatcagtgccatgctcagcaaa 1010
>gb|AC123514.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0004B05, complete sequence Length = 121223 Score = 107 bits (54), Expect = 4e-20 Identities = 156/190 (82%) Strand = Plus / Plus Query: 337 agaatctctcgccaaatctgaagaagacggttccagccccagtgttgtgatctacaatgt 396 |||||||||| |||||||| ||||||| || || | |||| |||||||| ||| | Sbjct: 16599 agaatctctcaccaaatctcaagaagaaggcccctgtgccagcattgtgatcaacagcat 16658 Query: 397 actctcctcttaccaagccaagcttgacgccaacaccatatgacgatccatggccaaccc 456 ||||| | |||||| ||||||||||| || || ||||| || || ||||||||||| | Sbjct: 16659 actctgcccttaccgcaccaagcttgacaccgacgccataggatgagccatggccaacac 16718 Query: 457 gtcggaagaactcagtagggttccctttcacgtccttggaactcccaaggtcggtgccat 516 ||| ||| ||||||||||||||||||| ||| |||||||| |||||||| || ||||||| Sbjct: 16719 gtctgaaaaactcagtagggttcccttccacatccttggagctcccaagatcagtgccat 16778 Query: 517 gttcagcaaa 526 | |||||||| Sbjct: 16779 gctcagcaaa 16788
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 107 bits (54), Expect = 4e-20 Identities = 156/190 (82%) Strand = Plus / Plus Query: 337 agaatctctcgccaaatctgaagaagacggttccagccccagtgttgtgatctacaatgt 396 |||||||||| |||||||| ||||||| || || | |||| |||||||| ||| | Sbjct: 738307 agaatctctcaccaaatctcaagaagaaggcccctgtgccagcattgtgatcaacagcat 738366 Query: 397 actctcctcttaccaagccaagcttgacgccaacaccatatgacgatccatggccaaccc 456 ||||| | |||||| ||||||||||| || || ||||| || || ||||||||||| | Sbjct: 738367 actctgcccttaccgcaccaagcttgacaccgacgccataggatgagccatggccaacac 738426 Query: 457 gtcggaagaactcagtagggttccctttcacgtccttggaactcccaaggtcggtgccat 516 ||| ||| ||||||||||||||||||| ||| |||||||| |||||||| || ||||||| Sbjct: 738427 gtctgaaaaactcagtagggttcccttccacatccttggagctcccaagatcagtgccat 738486 Query: 517 gttcagcaaa 526 | |||||||| Sbjct: 738487 gctcagcaaa 738496
>dbj|AK070010.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023038G17, full insert sequence Length = 2064 Score = 107 bits (54), Expect = 4e-20 Identities = 156/190 (82%) Strand = Plus / Minus Query: 337 agaatctctcgccaaatctgaagaagacggttccagccccagtgttgtgatctacaatgt 396 |||||||||| |||||||| ||||||| || || | |||| |||||||| ||| | Sbjct: 2054 agaatctctcaccaaatctcaagaagaaggcccctgtgccagcattgtgatcaacagcat 1995 Query: 397 actctcctcttaccaagccaagcttgacgccaacaccatatgacgatccatggccaaccc 456 ||||| | |||||| ||||||||||| || || ||||| || || ||||||||||| | Sbjct: 1994 actctgcccttaccgcaccaagcttgacaccgacgccataggatgagccatggccaacac 1935 Query: 457 gtcggaagaactcagtagggttccctttcacgtccttggaactcccaaggtcggtgccat 516 ||| ||| ||||||||||||||||||| ||| |||||||| |||||||| || ||||||| Sbjct: 1934 gtctgaaaaactcagtagggttcccttccacatccttggagctcccaagatcagtgccat 1875 Query: 517 gttcagcaaa 526 | |||||||| Sbjct: 1874 gctcagcaaa 1865
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 107 bits (54), Expect = 4e-20 Identities = 156/190 (82%) Strand = Plus / Plus Query: 337 agaatctctcgccaaatctgaagaagacggttccagccccagtgttgtgatctacaatgt 396 |||||||||| |||||||| ||||||| || || | |||| |||||||| ||| | Sbjct: 738308 agaatctctcaccaaatctcaagaagaaggcccctgtgccagcattgtgatcaacagcat 738367 Query: 397 actctcctcttaccaagccaagcttgacgccaacaccatatgacgatccatggccaaccc 456 ||||| | |||||| ||||||||||| || || ||||| || || ||||||||||| | Sbjct: 738368 actctgcccttaccgcaccaagcttgacaccgacgccataggatgagccatggccaacac 738427 Query: 457 gtcggaagaactcagtagggttccctttcacgtccttggaactcccaaggtcggtgccat 516 ||| ||| ||||||||||||||||||| ||| |||||||| |||||||| || ||||||| Sbjct: 738428 gtctgaaaaactcagtagggttcccttccacatccttggagctcccaagatcagtgccat 738487 Query: 517 gttcagcaaa 526 | |||||||| Sbjct: 738488 gctcagcaaa 738497
>emb|BX000512.1|CNS08CE2 Oryza sativa chromosome 11, . BAC OSJNBa0025K19 of library OSJNBa from chromosome 11 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 181322 Score = 107 bits (54), Expect = 4e-20 Identities = 156/190 (82%) Strand = Plus / Minus Query: 337 agaatctctcgccaaatctgaagaagacggttccagccccagtgttgtgatctacaatgt 396 |||||||||| |||||||| ||||||| || || | |||| |||||||| ||| | Sbjct: 4665 agaatctctcaccaaatctcaagaagaaggcccctgtgccagcattgtgatcaacagcat 4606 Query: 397 actctcctcttaccaagccaagcttgacgccaacaccatatgacgatccatggccaaccc 456 ||||| | |||||| ||||||||||| || || ||||| || || ||||||||||| | Sbjct: 4605 actctgcccttaccgcaccaagcttgacaccgacgccataggatgagccatggccaacac 4546 Query: 457 gtcggaagaactcagtagggttccctttcacgtccttggaactcccaaggtcggtgccat 516 ||| ||| ||||||||||||||||||| ||| |||||||| |||||||| || ||||||| Sbjct: 4545 gtctgaaaaactcagtagggttcccttccacatccttggagctcccaagatcagtgccat 4486 Query: 517 gttcagcaaa 526 | |||||||| Sbjct: 4485 gctcagcaaa 4476
>emb|BX649488.9| Zebrafish DNA sequence from clone DKEY-21O6 in linkage group 22, complete sequence Length = 183230 Score = 58.0 bits (29), Expect = 3e-05 Identities = 32/33 (96%) Strand = Plus / Plus Query: 187 ttcctcagaaaaagaacaaaacttcattattca 219 ||||| ||||||||||||||||||||||||||| Sbjct: 111884 ttcctgagaaaaagaacaaaacttcattattca 111916
>gb|AC084024.17| Homo sapiens chromosome 8, clone RP11-90P5, complete sequence Length = 135404 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 187 ttcctcagaaaaagaacaaaact 209 ||||||||||||||||||||||| Sbjct: 120617 ttcctcagaaaaagaacaaaact 120639
>emb|CR361552.19| Zebrafish DNA sequence from clone CH211-239J15 in linkage group 22, complete sequence Length = 166346 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Minus Query: 187 ttcctcagaaaaagaacaaaacttcattatt 217 ||||| |||||||||||||||||| |||||| Sbjct: 142730 ttcctgagaaaaagaacaaaactttattatt 142700
>emb|AL109759.4|CNS018OW Human chromosome 14 DNA sequence BAC R-898B23 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 201794 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 185 tcttcctcagaaaaagaacaaa 206 |||||||||||||||||||||| Sbjct: 13604 tcttcctcagaaaaagaacaaa 13625
>ref|NM_116977.2| Arabidopsis thaliana unknown protein AT4G09080 mRNA, complete cds Length = 1584 Score = 42.1 bits (21), Expect = 1.9 Identities = 63/77 (81%) Strand = Plus / Minus Query: 477 ttccctttcacgtccttggaactcccaaggtcggtgccatgttcagcaaaaccataaaca 536 ||||||||||| ||||| ||||| || | ||| | ||||| |||||||| |||| ||| Sbjct: 1180 ttccctttcacatcctttgaacttcccaaatcgtttccatgctcagcaaatgcatacaca 1121 Query: 537 tatgtgttcttcacagg 553 | ||||||||| ||||| Sbjct: 1120 tgtgtgttcttgacagg 1104
>gb|AC102092.7| Mus musculus chromosome 3, clone RP23-20B1, complete sequence Length = 234874 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 165 ccctgacactaacttatctct 185 ||||||||||||||||||||| Sbjct: 200630 ccctgacactaacttatctct 200610
>emb|AL691442.32| Human DNA sequence from clone RP11-540D14 on chromosome 1 Contains the 3' end of the ADAM15 gene for a disintegrin and metalloproteinase domain 15 (metargidin), the EFNA4 gene for ephrin-A4, the EFNA3 gene for ephrin-A3, the EFNA1 gene for ephrin-A1, the gene for a novel protein (LOC55974), the DPM3 gene for dolichyl-phosphate mannosyltransferase polypeptide 3 and four CpG islands, complete sequence Length = 92095 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 192 cagaaaaagaacaaaacttca 212 ||||||||||||||||||||| Sbjct: 19998 cagaaaaagaacaaaacttca 19978
>emb|AL137069.15| Human DNA sequence from clone RP11-167C5 on chromosome 9 Contains part of a variant of the PTPRD gene for protein tyrosine phosphatase, receptor type, D (HPTP, PTPD, HPTPD), complete sequence Length = 171852 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 282 caattgtgcattagacatccc 302 ||||||||||||||||||||| Sbjct: 92999 caattgtgcattagacatccc 93019
>gb|AC158585.3| Mus musculus chromosome 5, clone RP24-250F5, complete sequence Length = 158066 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 40 ttgaccatgacagaaagcctt 60 ||||||||||||||||||||| Sbjct: 8508 ttgaccatgacagaaagcctt 8528
>gb|AC091047.10| Homo sapiens chromosome 8, clone RP11-102F4, complete sequence Length = 165127 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 110 ccagcttgaagctctgcaagataaa 134 |||| |||||||||||||||||||| Sbjct: 118136 ccagattgaagctctgcaagataaa 118112
>gb|AC161001.4| Mus musculus BAC clone RP23-30A18 from chromosome 14, complete sequence Length = 215474 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 179 tatctctcttcctcagaaaaa 199 ||||||||||||||||||||| Sbjct: 171661 tatctctcttcctcagaaaaa 171641
>emb|AL161514.2|ATCHRIV26 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 26 Length = 199754 Score = 42.1 bits (21), Expect = 1.9 Identities = 63/77 (81%) Strand = Plus / Minus Query: 477 ttccctttcacgtccttggaactcccaaggtcggtgccatgttcagcaaaaccataaaca 536 ||||||||||| ||||| ||||| || | ||| | ||||| |||||||| |||| ||| Sbjct: 18319 ttccctttcacatcctttgaacttcccaaatcgtttccatgctcagcaaatgcatacaca 18260 Query: 537 tatgtgttcttcacagg 553 | ||||||||| ||||| Sbjct: 18259 tgtgtgttcttgacagg 18243
>gb|AC120128.17| Mus musculus chromosome 5, clone RP23-181F22, complete sequence Length = 213246 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 40 ttgaccatgacagaaagcctt 60 ||||||||||||||||||||| Sbjct: 55531 ttgaccatgacagaaagcctt 55511
>gb|AC160988.3| Mus musculus BAC clone RP23-236A22 from chromosome 14, complete sequence Length = 191733 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 179 tatctctcttcctcagaaaaa 199 ||||||||||||||||||||| Sbjct: 155231 tatctctcttcctcagaaaaa 155251
>gb|AC091525.17| Homo sapiens 12 BAC RP11-490N22 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 129740 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 188 tcctcagaaaaagaacaaaacttca 212 |||| |||||||||||||||||||| Sbjct: 55398 tcctaagaaaaagaacaaaacttca 55422
>gb|AC099760.5| Mus musculus BAC clone RP23-122E16 from chromosome 8, complete sequence Length = 193884 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 166 cctgacactaacttatctctc 186 ||||||||||||||||||||| Sbjct: 86271 cctgacactaacttatctctc 86251
>gb|AY585655.1| Arabidopsis thaliana chloroplast outer membrane protein (TOC75) mRNA, complete cds; nuclear gene for chloroplast product Length = 1466 Score = 42.1 bits (21), Expect = 1.9 Identities = 63/77 (81%) Strand = Plus / Minus Query: 477 ttccctttcacgtccttggaactcccaaggtcggtgccatgttcagcaaaaccataaaca 536 ||||||||||| ||||| ||||| || | ||| | ||||| |||||||| |||| ||| Sbjct: 1180 ttccctttcacatcctttgaacttcccaaatcgtttccatgctcagcaaatgcatacaca 1121 Query: 537 tatgtgttcttcacagg 553 | ||||||||| ||||| Sbjct: 1120 tgtgtgttcttgacagg 1104
>emb|BX827624.1|CNS0A4MU Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS86ZG12 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 758 Score = 42.1 bits (21), Expect = 1.9 Identities = 63/77 (81%) Strand = Plus / Minus Query: 477 ttccctttcacgtccttggaactcccaaggtcggtgccatgttcagcaaaaccataaaca 536 ||||||||||| ||||| ||||| || | ||| | ||||| |||||||| |||| ||| Sbjct: 355 ttccctttcacatcctttgaacttcccaaatcgtttccatgctcagcaaatgcatacaca 296 Query: 537 tatgtgttcttcacagg 553 | ||||||||| ||||| Sbjct: 295 tgtgtgttcttgacagg 279
>gb|AC083906.23| Homo sapiens 3 BAC RP11-93K22 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 167875 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 356 gaagaagacggttccagcccc 376 ||||||||||||||||||||| Sbjct: 65950 gaagaagacggttccagcccc 65970
>gb|AC025157.18| Homo sapiens 12 BAC RP11-401I10 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 143417 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 188 tcctcagaaaaagaacaaaacttca 212 |||| |||||||||||||||||||| Sbjct: 69068 tcctaagaaaaagaacaaaacttca 69092
>emb|AL109628.5|CNS018OT Human chromosome 14 DNA sequence BAC R-545M17 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 209817 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 285 ttgtgcattagacatcccagtcttg 309 ||||| ||||||||||||||||||| Sbjct: 21623 ttgtggattagacatcccagtcttg 21647
>emb|AL132639.4|CNS01DT4 Human chromosome 14 DNA sequence BAC R-407N17 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 196319 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 285 ttgtgcattagacatcccagtcttg 309 ||||| ||||||||||||||||||| Sbjct: 476 ttgtggattagacatcccagtcttg 452
>gb|AC005359.1|AC005359 REVERSE-COMPLEMENT OF: F23J3.GCG.SEQ CHECK: 2754 FROM: 1 TO: 93489, complete sequence Length = 93489 Score = 42.1 bits (21), Expect = 1.9 Identities = 63/77 (81%) Strand = Plus / Minus Query: 477 ttccctttcacgtccttggaactcccaaggtcggtgccatgttcagcaaaaccataaaca 536 ||||||||||| ||||| ||||| || | ||| | ||||| |||||||| |||| ||| Sbjct: 58293 ttccctttcacatcctttgaacttcccaaatcgtttccatgctcagcaaatgcatacaca 58234 Query: 537 tatgtgttcttcacagg 553 | ||||||||| ||||| Sbjct: 58233 tgtgtgttcttgacagg 58217
>gb|AF072897.1|AF072897 Arabidopsis thaliana BAC T8A17 chromosome IV, complete sequence Length = 83078 Score = 42.1 bits (21), Expect = 1.9 Identities = 63/77 (81%) Strand = Plus / Plus Query: 477 ttccctttcacgtccttggaactcccaaggtcggtgccatgttcagcaaaaccataaaca 536 ||||||||||| ||||| ||||| || | ||| | ||||| |||||||| |||| ||| Sbjct: 72068 ttccctttcacatcctttgaacttcccaaatcgtttccatgctcagcaaatgcatacaca 72127 Query: 537 tatgtgttcttcacagg 553 | ||||||||| ||||| Sbjct: 72128 tgtgtgttcttgacagg 72144
>gb|AC134843.4| Mus musculus BAC clone RP24-388C21 from 3, complete sequence Length = 205200 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 165 ccctgacactaacttatctct 185 ||||||||||||||||||||| Sbjct: 178177 ccctgacactaacttatctct 178197
>gb|AC152109.1| Pichia stipitis clone JGIAHYZ-13H12, complete sequence Length = 40187 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 34 aacaaattgaccatgacaga 53 |||||||||||||||||||| Sbjct: 11049 aacaaattgaccatgacaga 11030
>ref|XM_528159.1| PREDICTED: Pan troglodytes similar to mKIAA1077 protein (LOC472787), mRNA Length = 3414 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 115 ttgaagctctgcaagataaa 134 |||||||||||||||||||| Sbjct: 2201 ttgaagctctgcaagataaa 2220
>ref|XM_477671.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3292 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 113 gcttgaagctctgcaagata 132 |||||||||||||||||||| Sbjct: 2274 gcttgaagctctgcaagata 2293
>ref|XM_363152.1| Magnaporthe grisea 70-15 hypothetical protein (MG08736.4) partial cds Length = 1593 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 415 caagcttgacgccaacacca 434 |||||||||||||||||||| Sbjct: 438 caagcttgacgccaacacca 457
>emb|BX914197.15| Zebrafish DNA sequence from clone DKEYP-81F11 in linkage group 11, complete sequence Length = 198600 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 201 aacaaaacttcattattcag 220 |||||||||||||||||||| Sbjct: 160795 aacaaaacttcattattcag 160776
>gb|AC006026.2| Homo sapiens BAC clone GS1-96J14 from 7, complete sequence Length = 149869 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 195 aaaaagaacaaaacttcatt 214 |||||||||||||||||||| Sbjct: 44672 aaaaagaacaaaacttcatt 44691
>emb|AL450426.7| Human DNA sequence from clone RP11-317C20 on chromosome 9 Contains five novel olfactory (seven transmembrane helix) receptor genes, a pseudogene similar to part of novel olfactory (seven transmembrane helix) receptor and a CpG island, complete sequence Length = 136002 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 513 ccatgttcagcaaaaccata 532 |||||||||||||||||||| Sbjct: 105533 ccatgttcagcaaaaccata 105552
>gb|CP000302.1| Shewanella denitrificans OS217, complete genome Length = 4545906 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 407 taccaagccaagcttgacgc 426 |||||||||||||||||||| Sbjct: 4325873 taccaagccaagcttgacgc 4325892
>emb|AL136086.8| Human DNA sequence from clone GS1-56G5 on chromosome 1, complete sequence Length = 103347 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 178 ttatctctcttcctcagaaa 197 |||||||||||||||||||| Sbjct: 3909 ttatctctcttcctcagaaa 3928
>gb|AC128680.6| Homo sapiens 3 BAC RP13-551P9 (Roswell Park Cancer institute Human BAC Library) complete sequence Length = 146175 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 201 aacaaaacttcattattcag 220 |||||||||||||||||||| Sbjct: 34009 aacaaaacttcattattcag 33990
>emb|AL096819.17|HSDJ53A19 Human DNA sequence from clone RP1-53A19 on chromosome 1q25.1-31.1 Contains the C1orf22 gene for chromosome 1 open reading frame 22, the 3' end of the C1orf24 gene for chromosome 1 open reading frame 24 and a CpG island, complete sequence Length = 136188 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 178 ttatctctcttcctcagaaa 197 |||||||||||||||||||| Sbjct: 81385 ttatctctcttcctcagaaa 81404
>gb|AF545571.1| Homo sapiens sulfatase SULF1 precursor, mRNA, complete cds Length = 5699 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 115 ttgaagctctgcaagataaa 134 |||||||||||||||||||| Sbjct: 2655 ttgaagctctgcaagataaa 2674
>gb|BC068565.1| Homo sapiens sulfatase 1, mRNA (cDNA clone MGC:87514 IMAGE:4831138), complete cds Length = 3019 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 115 ttgaagctctgcaagataaa 134 |||||||||||||||||||| Sbjct: 1289 ttgaagctctgcaagataaa 1308
>emb|AL590463.1|SCO590463 Streptomyces coelicolor plasmid SCP1; segment 1/2 Length = 178000 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 502 caaggtcggtgccatgttca 521 |||||||||||||||||||| Sbjct: 101246 caaggtcggtgccatgttca 101265
>emb|BX927069.11| Zebrafish DNA sequence from clone DKEY-24C22 in linkage group 23, complete sequence Length = 162588 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 50 cagaaagccttgtcaaaacattcc 73 |||||||| ||||||||||||||| Sbjct: 7173 cagaaagcattgtcaaaacattcc 7196
>emb|BX571746.1|HSM806622 Homo sapiens mRNA; cDNA DKFZp686F13142 (from clone DKFZp686F13142) Length = 4817 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 115 ttgaagctctgcaagataaa 134 |||||||||||||||||||| Sbjct: 2617 ttgaagctctgcaagataaa 2636
>ref|NM_015170.1| Homo sapiens sulfatase 1 (SULF1), mRNA Length = 5699 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 115 ttgaagctctgcaagataaa 134 |||||||||||||||||||| Sbjct: 2655 ttgaagctctgcaagataaa 2674
>dbj|AB029000.1| Homo sapiens mRNA for KIAA1077 protein, partial cds Length = 4834 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 115 ttgaagctctgcaagataaa 134 |||||||||||||||||||| Sbjct: 1790 ttgaagctctgcaagataaa 1809
>dbj|AK074873.1| Homo sapiens cDNA FLJ90392 fis, clone NT2RP2005541, weakly similar to N-ACETYLGLUCOSAMINE-6-SULFATASE PRECURSOR (EC 3.1.6.14) Length = 3209 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 115 ttgaagctctgcaagataaa 134 |||||||||||||||||||| Sbjct: 1026 ttgaagctctgcaagataaa 1045
>dbj|AK055607.1| Homo sapiens cDNA FLJ31045 fis, clone HSYRA2000255, weakly similar to N-ACETYLGLUCOSAMINE-6-SULFATASE PRECURSOR (EC 3.1.6.14) Length = 2554 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 115 ttgaagctctgcaagataaa 134 |||||||||||||||||||| Sbjct: 2454 ttgaagctctgcaagataaa 2473
>gb|AC090132.3| Homo sapiens chromosome 8, clone RP11-813B8, complete sequence Length = 205004 Score = 40.1 bits (20), Expect = 7.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 185 tcttcctcagaaaaagaacaaaacttca 212 |||||||||||||| | ||||||||||| Sbjct: 50723 tcttcctcagaaaatgcacaaaacttca 50750
>emb|BX465229.7| Zebrafish DNA sequence from clone CH211-174D2 in linkage group 2, complete sequence Length = 154954 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 57 ccttgtcaaaacattccttg 76 |||||||||||||||||||| Sbjct: 51268 ccttgtcaaaacattccttg 51287
>gb|AC148296.3| Pan troglodytes BAC clone CH251-545I16 from chromosome 7, complete sequence Length = 187553 Score = 40.1 bits (20), Expect = 7.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 185 tcttcctcagaaaaagaacaaaacttca 212 |||||||||||||| | ||||||||||| Sbjct: 99109 tcttcctcagaaaatgcacaaaacttca 99082
>gb|AC154772.2| Mus musculus BAC clone RP24-448H7 from chromosome 16, complete sequence Length = 169374 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 198 aagaacaaaacttcattatt 217 |||||||||||||||||||| Sbjct: 16867 aagaacaaaacttcattatt 16886
>gb|AC008105.32| Homo sapiens chromosome 17, clone CTD-2020K17, complete sequence Length = 96875 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 197 aaagaacaaaacttcattattcag 220 ||||||||||||||||||| |||| Sbjct: 23922 aaagaacaaaacttcattaatcag 23899
>gb|AC148670.1| Macaca mulatta Major Histocompatibility Complex BAC MMU063G23, complete sequence Length = 189655 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 515 atgttcagcaaaaccataaa 534 |||||||||||||||||||| Sbjct: 38434 atgttcagcaaaaccataaa 38453
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 113 gcttgaagctctgcaagata 132 |||||||||||||||||||| Sbjct: 12981573 gcttgaagctctgcaagata 12981592
>dbj|AB128049.1| Macaca mulatta genes, MHC class I region, partial and complete cds Length = 3284914 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 515 atgttcagcaaaaccataaa 534 |||||||||||||||||||| Sbjct: 2593950 atgttcagcaaaaccataaa 2593931
>gb|AC015550.19| Homo sapiens 12 BAC RP11-254B13 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 140300 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 318 tgctgaatgaaatgcattca 337 |||||||||||||||||||| Sbjct: 130371 tgctgaatgaaatgcattca 130352
>gb|AC012073.9| Homo sapiens BAC clone RP11-443B20 from 2, complete sequence Length = 153792 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 216 ttcagcagaacaaaagccac 235 |||||||||||||||||||| Sbjct: 57282 ttcagcagaacaaaagccac 57263
>gb|AY101175.1| Homo sapiens extracellular sulfatase SULF-1 mRNA, complete cds Length = 4669 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 115 ttgaagctctgcaagataaa 134 |||||||||||||||||||| Sbjct: 2457 ttgaagctctgcaagataaa 2476
>dbj|AP005247.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0077F02 Length = 172442 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 113 gcttgaagctctgcaagata 132 |||||||||||||||||||| Sbjct: 55870 gcttgaagctctgcaagata 55889
>gb|AC007934.7|AC007934 Homo sapiens, clone RP11-29A1, complete sequence Length = 157625 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 201 aacaaaacttcattattcag 220 |||||||||||||||||||| Sbjct: 32188 aacaaaacttcattattcag 32207
>dbj|AK106540.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-108-D11, full insert sequence Length = 1964 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 113 gcttgaagctctgcaagata 132 |||||||||||||||||||| Sbjct: 909 gcttgaagctctgcaagata 928
>dbj|AK103479.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033130E20, full insert sequence Length = 3292 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 113 gcttgaagctctgcaagata 132 |||||||||||||||||||| Sbjct: 2274 gcttgaagctctgcaagata 2293
>emb|BX005137.9| Zebrafish DNA sequence from clone CH211-167L17 in linkage group 21, complete sequence Length = 156370 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 57 ccttgtcaaaacattccttg 76 |||||||||||||||||||| Sbjct: 56391 ccttgtcaaaacattccttg 56372
>emb|AL732539.6| Mouse DNA sequence from clone RP23-255E6 on chromosome 11 Contains the 3' end of the Msi2h gene for Musashi homolog 2 (Drosophila), an eukaryotic translation elongation factor 2 (Eef2) pseudogene and a ribosomal protein L35a (Rpl35a) pseudogene, complete sequence Length = 216688 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 59 ttgtcaaaacattccttgct 78 |||||||||||||||||||| Sbjct: 88503 ttgtcaaaacattccttgct 88484
>gb|AC154292.1| Mus musculus BAC clone RP24-488N1 from 16, complete sequence Length = 192613 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 198 aagaacaaaacttcattatt 217 |||||||||||||||||||| Sbjct: 184990 aagaacaaaacttcattatt 185009
>gb|AC140409.3| Mus musculus BAC clone RP23-138K22 from 9, complete sequence Length = 200157 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 516 tgttcagcaaaaccataaac 535 |||||||||||||||||||| Sbjct: 116056 tgttcagcaaaaccataaac 116037
>emb|AL669980.9| Mouse DNA sequence from clone RP23-218C2 on chromosome 4, complete sequence Length = 157624 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 166 cctgacactaacttatctctcttc 189 |||| ||||||||||||||||||| Sbjct: 17296 cctggcactaacttatctctcttc 17319 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,659,835 Number of Sequences: 3902068 Number of extensions: 5659835 Number of successful extensions: 118730 Number of sequences better than 10.0: 82 Number of HSP's better than 10.0 without gapping: 82 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 118327 Number of HSP's gapped (non-prelim): 401 length of query: 561 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 538 effective length of database: 17,143,297,704 effective search space: 9223094164752 effective search space used: 9223094164752 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)