ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbah61l23
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1CLIC1_MOUSE (Q9Z1Q5) Chloride intracellular channel protein 1 (N... 43 5e-04
2CLIC1_HUMAN (O00299) Chloride intracellular channel protein 1 (N... 43 5e-04
3CLIC1_RABIT (Q95MF9) Chloride intracellular channel protein 1 41 0.002
4CLIC4_BOVIN (Q9XSA7) Chloride intracellular channel protein 4 (I... 39 0.007
5CLIC3_MOUSE (Q9D7P7) Chloride intracellular channel protein 3 39 0.009
6CLIC4_HUMAN (Q9Y696) Chloride intracellular channel protein 4 (I... 38 0.015
7CLIC4_RAT (Q9Z0W7) Chloride intracellular channel protein 4 (Int... 38 0.019
8CLIC4_MOUSE (Q9QYB1) Chloride intracellular channel protein 4 (m... 38 0.019
9CLIC3_HUMAN (O95833) Chloride intracellular channel protein 3 37 0.043
10CREA_GIBFU (O94131) DNA-binding protein creA (Carbon catabolite ... 32 1.1
11ZAP1_YEAST (P47043) Zinc-responsive transcriptional regulator ZAP1 32 1.1
12OPA_DROME (P39768) Pair-rule protein odd-paired 32 1.4
13PC_DROME (P26017) Polycomb group protein Pc (Protein polycomb) 30 3.1
14KNOB_PLAFN (P06719) Knob-associated histidine-rich protein precu... 30 3.1
15PO3F1_MOUSE (P21952) POU domain, class 3, transcription factor 1... 30 4.0
16PO3F1_HUMAN (Q03052) POU domain, class 3, transcription factor 1... 30 4.0
17PO3F1_RAT (P20267) POU domain, class 3, transcription factor 1 (... 30 4.0
18DYRK2_DROME (Q9V3D5) Dual specificity tyrosine-phosphorylation-r... 30 4.0
19ASR_ECOLI (P36560) Acid shock protein precursor 30 4.0
20ASR_ECOL6 (Q8CW15) Acid shock protein precursor 30 4.0
21ASR_ECO57 (Q8X783) Acid shock protein precursor 30 4.0
22QIN_AVIS3 (P56260) Transforming protein Qin (Oncogene Qin) 30 5.3
23CAC1A_RABIT (P27884) Voltage-dependent P/Q-type calcium channel ... 30 5.3
24FOXGB_CHICK (Q90964) Forkhead box protein G1B (Forkhead-related ... 30 5.3
25VND_DROME (P22808) Homeobox protein vnd (Protein ventral nervous... 29 6.9
26YKS7_YEAST (P34231) Protein YKL187C 29 9.0
27HYCG_ECOLI (P16433) Formate hydrogenlyase subunit 7 (FHL subunit... 29 9.0
28SDC1_HUMAN (P18827) Syndecan-1 precursor (SYND1) (CD138 antigen) 29 9.0
29TBX19_MOUSE (Q99ME7) T-box transcription factor TBX19 (T-box pro... 29 9.0
30IST2_YEAST (P38250) Increased sodium tolerance protein 2 29 9.0
31SHAN1_RAT (Q9WV48) SH3 and multiple ankyrin repeat domains prote... 29 9.0
32MTP1_ARATH (Q9ZT63) Metal tolerance protein 1 (AtMTP1) (Zinc tra... 29 9.0
33SHAN1_HUMAN (Q9Y566) SH3 and multiple ankyrin repeat domains pro... 29 9.0

>CLIC1_MOUSE (Q9Z1Q5) Chloride intracellular channel protein 1 (Nuclear chloride|
           ion channel 27) (NCC27)
          Length = 240

 Score = 43.1 bits (100), Expect = 5e-04
 Identities = 18/63 (28%), Positives = 32/63 (50%)
 Frame = -2

Query: 506 YINGANVSAXDLSLAPKLFHLQVALXHFKGXKVPETXTSVHAYTEALFSRXSFVKTXPTK 327
           +++G  ++  D +L PKL  +QV    ++G  +PE    VH Y    ++R  F  T P  
Sbjct: 166 FLDGNELTLADCNLLPKLHIVQVVCKKYRGFTIPEAFRGVHRYLSNAYAREEFASTCPDD 225

Query: 326 KNL 318
           + +
Sbjct: 226 EEI 228



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>CLIC1_HUMAN (O00299) Chloride intracellular channel protein 1 (Nuclear chloride|
           ion channel 27) (NCC27) (Chloride channel ABP)
           (Regulatory nuclear chloride ion channel protein)
           (hRNCC)
          Length = 240

 Score = 43.1 bits (100), Expect = 5e-04
 Identities = 18/63 (28%), Positives = 32/63 (50%)
 Frame = -2

Query: 506 YINGANVSAXDLSLAPKLFHLQVALXHFKGXKVPETXTSVHAYTEALFSRXSFVKTXPTK 327
           +++G  ++  D +L PKL  +QV    ++G  +PE    VH Y    ++R  F  T P  
Sbjct: 166 FLDGNELTLADCNLLPKLHIVQVVCKKYRGFTIPEAFRGVHRYLSNAYAREEFASTCPDD 225

Query: 326 KNL 318
           + +
Sbjct: 226 EEI 228



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>CLIC1_RABIT (Q95MF9) Chloride intracellular channel protein 1|
          Length = 240

 Score = 40.8 bits (94), Expect = 0.002
 Identities = 18/63 (28%), Positives = 31/63 (49%)
 Frame = -2

Query: 506 YINGANVSAXDLSLAPKLFHLQVALXHFKGXKVPETXTSVHAYTEALFSRXSFVKTXPTK 327
           +++G  ++  D +L PKL  +QV     +G  +PE    VH Y    ++R  F  T P  
Sbjct: 166 FLDGNELTLADCNLLPKLHIVQVVCKKNRGFTIPEVFRGVHRYLSNAYAREEFASTCPDD 225

Query: 326 KNL 318
           + +
Sbjct: 226 EEI 228



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>CLIC4_BOVIN (Q9XSA7) Chloride intracellular channel protein 4 (Intracellular|
           chloride ion channel protein p64H1) (Fragment)
          Length = 158

 Score = 39.3 bits (90), Expect = 0.007
 Identities = 17/63 (26%), Positives = 32/63 (50%)
 Frame = -2

Query: 506 YINGANVSAXDLSLAPKLFHLQVALXHFKGXKVPETXTSVHAYTEALFSRXSFVKTXPTK 327
           +++G  ++  D +L PKL  ++V    ++   +PE  T +  Y    +SR  F  T P+ 
Sbjct: 83  FLDGNEMTLADCNLLPKLHIVKVVAKKYRNFDIPEGMTGIWRYLTNAYSRDEFTNTCPSD 142

Query: 326 KNL 318
           K +
Sbjct: 143 KEV 145



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>CLIC3_MOUSE (Q9D7P7) Chloride intracellular channel protein 3|
          Length = 237

 Score = 38.9 bits (89), Expect = 0.009
 Identities = 17/72 (23%), Positives = 33/72 (45%)
 Frame = -2

Query: 521 KAHGPYINGANVSAXDLSLAPKLFHLQVALXHFKGXKVPETXTSVHAYTEALFSRXSFVK 342
           ++H  +++G   +  D SL PKL  +     HF+   +P   + V  Y ++   +  F  
Sbjct: 159 ESHRRFLDGDQFTLADCSLLPKLHIVDTVCAHFRQLPIPAELSCVRRYLDSALQKKEFKY 218

Query: 341 TXPTKKNLIAGW 306
           T P    ++A +
Sbjct: 219 TCPHSAEILAAY 230



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>CLIC4_HUMAN (Q9Y696) Chloride intracellular channel protein 4 (Intracellular|
           chloride ion channel protein p64H1)
          Length = 252

 Score = 38.1 bits (87), Expect = 0.015
 Identities = 16/63 (25%), Positives = 32/63 (50%)
 Frame = -2

Query: 506 YINGANVSAXDLSLAPKLFHLQVALXHFKGXKVPETXTSVHAYTEALFSRXSFVKTXPTK 327
           +++G  ++  D +L PKL  ++V    ++   +P+  T +  Y    +SR  F  T P+ 
Sbjct: 177 FLDGNEMTLADCNLLPKLHIVKVVAKKYRNFDIPKEMTGIWRYLTNAYSRDEFTNTCPSD 236

Query: 326 KNL 318
           K +
Sbjct: 237 KEV 239



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>CLIC4_RAT (Q9Z0W7) Chloride intracellular channel protein 4 (Intracellular|
           chloride ion channel protein p64H1)
          Length = 252

 Score = 37.7 bits (86), Expect = 0.019
 Identities = 16/63 (25%), Positives = 32/63 (50%)
 Frame = -2

Query: 506 YINGANVSAXDLSLAPKLFHLQVALXHFKGXKVPETXTSVHAYTEALFSRXSFVKTXPTK 327
           +++G  ++  D +L PKL  ++V    ++   +P+  T +  Y    +SR  F  T P+ 
Sbjct: 177 FLDGDEMTLADCNLLPKLHIVKVVAKKYRNFDIPKGMTGIWRYLTNAYSRDEFTNTCPSD 236

Query: 326 KNL 318
           K +
Sbjct: 237 KEV 239



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>CLIC4_MOUSE (Q9QYB1) Chloride intracellular channel protein 4 (mc3s5/mtCLIC)|
          Length = 252

 Score = 37.7 bits (86), Expect = 0.019
 Identities = 16/63 (25%), Positives = 32/63 (50%)
 Frame = -2

Query: 506 YINGANVSAXDLSLAPKLFHLQVALXHFKGXKVPETXTSVHAYTEALFSRXSFVKTXPTK 327
           +++G  ++  D +L PKL  ++V    ++   +P+  T +  Y    +SR  F  T P+ 
Sbjct: 177 FLDGDEMTLADCNLLPKLHIVKVVAKKYRNFDIPKGMTGIWRYLTNAYSRDEFTNTCPSD 236

Query: 326 KNL 318
           K +
Sbjct: 237 KEV 239



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>CLIC3_HUMAN (O95833) Chloride intracellular channel protein 3|
          Length = 236

 Score = 36.6 bits (83), Expect = 0.043
 Identities = 16/67 (23%), Positives = 29/67 (43%)
 Frame = -2

Query: 506 YINGANVSAXDLSLAPKLFHLQVALXHFKGXKVPETXTSVHAYTEALFSRXSFVKTXPTK 327
           +++G  ++  D SL PKL  +     HF+   +P     V  Y ++      F  T P  
Sbjct: 163 FLDGDRLTLADCSLLPKLHIVDTVCAHFRQAPIPAELRGVRRYLDSAMQEKEFKYTCPHS 222

Query: 326 KNLIAGW 306
             ++A +
Sbjct: 223 AEILAAY 229



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>CREA_GIBFU (O94131) DNA-binding protein creA (Carbon catabolite repressor)|
          Length = 420

 Score = 32.0 bits (71), Expect = 1.1
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = +1

Query: 55  LTAPPEHTHHNHTHKPGRGQTVHAASARLRQAEHTAEARSHYSKPRS 195
           LTAPP H++ NH H P  G  +H++   L         RSH ++  S
Sbjct: 215 LTAPPHHSN-NHRHHPYFGHGMHSSRGHLPTLSSYHMGRSHSNEDPS 260



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>ZAP1_YEAST (P47043) Zinc-responsive transcriptional regulator ZAP1|
          Length = 880

 Score = 32.0 bits (71), Expect = 1.1
 Identities = 19/71 (26%), Positives = 34/71 (47%), Gaps = 3/71 (4%)
 Frame = +1

Query: 16  HTIKGSHHNTCTPLTAPPEHTHHN---HTHKPGRGQTVHAASARLRQAEHTAEARSHYSK 186
           + + GS++NT    +   +H HH    H+HKP R   V+  ++ +  A  TA+  ++   
Sbjct: 442 NNLNGSNNNTAGATSTDHQHHHHRIQFHSHKPNRNNIVN--NSGISAANTTADLTNNDLN 499

Query: 187 PRSTMRPSYRR 219
              +   SY R
Sbjct: 500 DLISREYSYER 510



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>OPA_DROME (P39768) Pair-rule protein odd-paired|
          Length = 609

 Score = 31.6 bits (70), Expect = 1.4
 Identities = 14/35 (40%), Positives = 16/35 (45%)
 Frame = +1

Query: 52  PLTAPPEHTHHNHTHKPGRGQTVHAASARLRQAEH 156
           PL  PP H HH H H+        AASA +    H
Sbjct: 522 PLGPPPSHHHHPHHHQAAPSPGAAAASASMLHHNH 556



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>PC_DROME (P26017) Polycomb group protein Pc (Protein polycomb)|
          Length = 390

 Score = 30.4 bits (67), Expect = 3.1
 Identities = 15/41 (36%), Positives = 23/41 (56%)
 Frame = +1

Query: 13  HHTIKGSHHNTCTPLTAPPEHTHHNHTHKPGRGQTVHAASA 135
           HH IK S  N+     +P  H HH+H H+  R +  H++S+
Sbjct: 141 HHHIK-SERNSGRRSESPLTHHHHHHHHESKRQRIDHSSSS 180



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>KNOB_PLAFN (P06719) Knob-associated histidine-rich protein precursor (KAHRP)|
          Length = 657

 Score = 30.4 bits (67), Expect = 3.1
 Identities = 18/61 (29%), Positives = 23/61 (37%), Gaps = 1/61 (1%)
 Frame = +1

Query: 13  HHTIKGSHHNTCTPLTAPPE-HTHHNHTHKPGRGQTVHAASARLRQAEHTAEARSHYSKP 189
           HH     HH    P  AP + H HH+H     +   VH       QA H      H+  P
Sbjct: 65  HHHHHHHHHQHQAPHQAPHQAHHHHHHGEVNHQAPQVHQQVHGQDQAHHHHHHHHHHLHP 124

Query: 190 R 192
           +
Sbjct: 125 Q 125



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>PO3F1_MOUSE (P21952) POU domain, class 3, transcription factor 1|
           (Octamer-binding transcription factor 6) (Oct-6)
           (POU-domain transcription factor SCIP)
          Length = 449

 Score = 30.0 bits (66), Expect = 4.0
 Identities = 14/44 (31%), Positives = 18/44 (40%)
 Frame = +1

Query: 10  LHHTIKGSHHNTCTPLTAPPEHTHHNHTHKPGRGQTVHAASARL 141
           LHH +    H      + PP    H H H       +HAA+A L
Sbjct: 185 LHHALHEDGHEAQLEPSPPPHLGAHGHAHGHAHAGGLHAAAAHL 228



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>PO3F1_HUMAN (Q03052) POU domain, class 3, transcription factor 1|
           (Octamer-binding transcription factor 6) (Oct-6)
           (POU-domain transcription factor SCIP)
          Length = 448

 Score = 30.0 bits (66), Expect = 4.0
 Identities = 14/44 (31%), Positives = 18/44 (40%)
 Frame = +1

Query: 10  LHHTIKGSHHNTCTPLTAPPEHTHHNHTHKPGRGQTVHAASARL 141
           LHH +    H      + PP    H H H       +HAA+A L
Sbjct: 184 LHHALHEDGHEAQLEPSPPPHLGAHGHAHGHAHAGGLHAAAAHL 227



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>PO3F1_RAT (P20267) POU domain, class 3, transcription factor 1|
           (Octamer-binding transcription factor 6) (Oct-6)
           (POU-domain transcription factor SCIP) (Tst-1)
          Length = 451

 Score = 30.0 bits (66), Expect = 4.0
 Identities = 14/44 (31%), Positives = 18/44 (40%)
 Frame = +1

Query: 10  LHHTIKGSHHNTCTPLTAPPEHTHHNHTHKPGRGQTVHAASARL 141
           LHH +    H      + PP    H H H       +HAA+A L
Sbjct: 187 LHHALHEDGHEAQLEPSPPPHLGAHGHAHGHAHAGGLHAAAAHL 230



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>DYRK2_DROME (Q9V3D5) Dual specificity tyrosine-phosphorylation-regulated kinase|
           2 (EC 2.7.12.1) (dDyrk2) (Protein smell impaired at 35A)
          Length = 722

 Score = 30.0 bits (66), Expect = 4.0
 Identities = 13/51 (25%), Positives = 25/51 (49%)
 Frame = +1

Query: 13  HHTIKGSHHNTCTPLTAPPEHTHHNHTHKPGRGQTVHAASARLRQAEHTAE 165
           HH +  +HHN  T   A   H HH+H  +  +  +  A++  +  ++ T +
Sbjct: 664 HHNV--THHNASTATIATTTHHHHHHGGQQQQQSSSGASTMAMSHSQSTGD 712



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>ASR_ECOLI (P36560) Acid shock protein precursor|
          Length = 102

 Score = 30.0 bits (66), Expect = 4.0
 Identities = 18/61 (29%), Positives = 25/61 (40%), Gaps = 7/61 (11%)
 Frame = +1

Query: 49  TPLTAPPEHTHHNHTHKPGRGQTVHAA-------SARLRQAEHTAEARSHYSKPRSTMRP 207
           T   AP + THH   HK    Q   AA        A  +  E  A+A   ++K  S  +P
Sbjct: 34  TTKAAPAKTTHHKKQHKAAPAQKAQAAKKHHKNTKAEQKAPEQKAQAAKKHAKKHSHQQP 93

Query: 208 S 210
           +
Sbjct: 94  A 94



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>ASR_ECOL6 (Q8CW15) Acid shock protein precursor|
          Length = 102

 Score = 30.0 bits (66), Expect = 4.0
 Identities = 18/61 (29%), Positives = 25/61 (40%), Gaps = 7/61 (11%)
 Frame = +1

Query: 49  TPLTAPPEHTHHNHTHKPGRGQTVHA-------ASARLRQAEHTAEARSHYSKPRSTMRP 207
           T   AP + THH   HK    Q   A       A A  +  E  A+A   ++K  S  +P
Sbjct: 34  TTKAAPAKTTHHKKQHKAAPAQKAQAAKKHHKNAKAEQKAPEQKAQAAKKHAKKHSHQQP 93

Query: 208 S 210
           +
Sbjct: 94  A 94



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>ASR_ECO57 (Q8X783) Acid shock protein precursor|
          Length = 102

 Score = 30.0 bits (66), Expect = 4.0
 Identities = 18/61 (29%), Positives = 25/61 (40%), Gaps = 7/61 (11%)
 Frame = +1

Query: 49  TPLTAPPEHTHHNHTHKPGRGQTVHAA-------SARLRQAEHTAEARSHYSKPRSTMRP 207
           T   AP + THH   HK    Q   AA        A  +  E  A+A   ++K  S  +P
Sbjct: 34  TTKAAPAKTTHHKKQHKAAPAQKAQAAKKHHKNTKAEQKAPEQKAQAAKKHAKKHSHQQP 93

Query: 208 S 210
           +
Sbjct: 94  A 94



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>QIN_AVIS3 (P56260) Transforming protein Qin (Oncogene Qin)|
          Length = 387

 Score = 29.6 bits (65), Expect = 5.3
 Identities = 16/44 (36%), Positives = 20/44 (45%)
 Frame = +1

Query: 31  SHHNTCTPLTAPPEHTHHNHTHKPGRGQTVHAASARLRQAEHTA 162
           SHHN+       P H HH+H H P   Q    A+A   + E  A
Sbjct: 37  SHHNS-----HHPHHHHHHHHHHPPPPQQPQRAAAAEEEDEEKA 75



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>CAC1A_RABIT (P27884) Voltage-dependent P/Q-type calcium channel alpha-1A subunit|
            (Voltage-gated calcium channel alpha subunit Cav2.1)
            (Calcium channel, L type, alpha-1 polypeptide isoform 4)
            (Brain calcium channel I) (BI)
          Length = 2424

 Score = 29.6 bits (65), Expect = 5.3
 Identities = 15/35 (42%), Positives = 18/35 (51%), Gaps = 2/35 (5%)
 Frame = +1

Query: 73   HTHHNHTHKPGR--GQTVHAASARLRQAEHTAEAR 171
            H HH+H H PGR  G+     SAR R+    A  R
Sbjct: 2219 HHHHHHHHHPGRGPGRVSPGVSARRRRRGPVARVR 2253



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>FOXGB_CHICK (Q90964) Forkhead box protein G1B (Forkhead-related protein FKHL1)|
           (Transcription factor BF-1) (Brain factor 1) (BF1)
           (CBF-1) (Proto-oncogene C-QIN) (N-62-5) (CEQ 3-1)
          Length = 451

 Score = 29.6 bits (65), Expect = 5.3
 Identities = 16/44 (36%), Positives = 20/44 (45%)
 Frame = +1

Query: 31  SHHNTCTPLTAPPEHTHHNHTHKPGRGQTVHAASARLRQAEHTA 162
           SHHN+       P H HH+H H P   Q    A+A   + E  A
Sbjct: 37  SHHNS-----HHPHHHHHHHHHHPPPPQQPQRAAAAEEEDEEKA 75



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>VND_DROME (P22808) Homeobox protein vnd (Protein ventral nervous system|
           defective) (Homeobox protein NK-2)
          Length = 723

 Score = 29.3 bits (64), Expect = 6.9
 Identities = 19/56 (33%), Positives = 23/56 (41%), Gaps = 1/56 (1%)
 Frame = +1

Query: 13  HHTIKGSHHNTCTPLTAPPEHTHHNHTHKPGRGQTVHAASARLRQAEH-TAEARSH 177
           HH+    H     P    P H  H+H H     Q    A A L  A H + EA+SH
Sbjct: 281 HHSTTEHHAPPSHPQQQHPHHQQHHHPHLLLPQQHHQQAVAPLPLAHHQSGEAQSH 336



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>YKS7_YEAST (P34231) Protein YKL187C|
          Length = 750

 Score = 28.9 bits (63), Expect = 9.0
 Identities = 12/21 (57%), Positives = 14/21 (66%)
 Frame = -2

Query: 509 PYINGANVSAXDLSLAPKLFH 447
           PY+N  N+SA DL L  KL H
Sbjct: 513 PYLNALNISANDLYLEGKLLH 533



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>HYCG_ECOLI (P16433) Formate hydrogenlyase subunit 7 (FHL subunit 7)|
           (Hydrogenase-3 component G)
          Length = 255

 Score = 28.9 bits (63), Expect = 9.0
 Identities = 16/43 (37%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
 Frame = -2

Query: 161 AVCSACRKRALAAWTVCPLPGLCV*LW-CVCSGGAVKGVHVLW 36
           AV  A R  AL AW   P P +C+    C  SGG    ++ +W
Sbjct: 87  AVTRAMRSPALRAWQSAPDPKICISYGACGNSGGIFHDLYCVW 129



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>SDC1_HUMAN (P18827) Syndecan-1 precursor (SYND1) (CD138 antigen)|
          Length = 310

 Score = 28.9 bits (63), Expect = 9.0
 Identities = 18/55 (32%), Positives = 23/55 (41%), Gaps = 4/55 (7%)
 Frame = +1

Query: 13  HHTIKGSHHNTCTPLTAPPEHTHHNHTHKPGRGQTVHA----ASARLRQAEHTAE 165
           H  ++  HH T TP        H  HT   G   T  A    AS++L  AE + E
Sbjct: 154 HRDMQPGHHETSTPAGPSQADLHTPHTEDGGPSATERAAEDGASSQLPAAEGSGE 208



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>TBX19_MOUSE (Q99ME7) T-box transcription factor TBX19 (T-box protein 19) (T-box|
           factor, pituitary)
          Length = 446

 Score = 28.9 bits (63), Expect = 9.0
 Identities = 12/29 (41%), Positives = 14/29 (48%)
 Frame = +1

Query: 19  TIKGSHHNTCTPLTAPPEHTHHNHTHKPG 105
           T   S++   TPL  P  HTHH   H  G
Sbjct: 254 TAANSNYQYATPLPLPAPHTHHGCEHYAG 282



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>IST2_YEAST (P38250) Increased sodium tolerance protein 2|
          Length = 946

 Score = 28.9 bits (63), Expect = 9.0
 Identities = 14/54 (25%), Positives = 24/54 (44%)
 Frame = +1

Query: 31   SHHNTCTPLTAPPEHTHHNHTHKPGRGQTVHAASARLRQAEHTAEARSHYSKPR 192
            S++NT T  T      HH+H H   R   V   +   +  E ++ + +   KP+
Sbjct: 880  SNNNTTTTTTTDATQPHHHHHHHRHRDAGVKNVTNNSKTTESSSSSSAAKEKPK 933



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>SHAN1_RAT (Q9WV48) SH3 and multiple ankyrin repeat domains protein 1 (Shank1)|
            (GKAP/SAPAP-interacting protein) (SPANK-1) (Synamon)
            (Somatostatin receptor-interacting protein)
            (SSTR-interacting protein) (SSTRIP)
          Length = 2167

 Score = 28.9 bits (63), Expect = 9.0
 Identities = 12/30 (40%), Positives = 14/30 (46%)
 Frame = +1

Query: 13   HHTIKGSHHNTCTPLTAPPEHTHHNHTHKP 102
            HH     HH+      APP   HH+H H P
Sbjct: 1006 HHPPHHHHHH------APPPQPHHHHAHPP 1029



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>MTP1_ARATH (Q9ZT63) Metal tolerance protein 1 (AtMTP1) (Zinc transporter|
           ZAT-1) (ZAT1p) [Contains: Metal tolerance protein 1
           short form]
          Length = 398

 Score = 28.9 bits (63), Expect = 9.0
 Identities = 13/34 (38%), Positives = 16/34 (47%), Gaps = 2/34 (5%)
 Frame = +1

Query: 34  HHNTCTPLTAPPEHTHHNHT--HKPGRGQTVHAA 129
           HHN    +T    H HH+H   H  G G+  H A
Sbjct: 198 HHNHSHGVTVTTHHHHHDHEHGHSHGHGEDKHHA 231



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>SHAN1_HUMAN (Q9Y566) SH3 and multiple ankyrin repeat domains protein 1 (Shank1)|
            (Somatostatin receptor-interacting protein)
            (SSTR-interacting protein) (SSTRIP)
          Length = 2161

 Score = 28.9 bits (63), Expect = 9.0
 Identities = 12/30 (40%), Positives = 14/30 (46%)
 Frame = +1

Query: 13   HHTIKGSHHNTCTPLTAPPEHTHHNHTHKP 102
            HH     HH+      APP   HH+H H P
Sbjct: 998  HHPPHHHHHH------APPPQPHHHHAHPP 1021


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 65,796,756
Number of Sequences: 219361
Number of extensions: 1192040
Number of successful extensions: 4282
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 3871
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4180
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 3970331829
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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