ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbah61l22
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1EWG_DROME (Q24312) DNA-binding protein Ewg (Protein erect wing) 34 0.42
2METK_BACHD (Q9K7Q9) S-adenosylmethionine synthetase (EC 2.5.1.6)... 30 4.6
3CD2L7_HUMAN (Q9NYV4) Cell division cycle 2-related protein kinas... 30 7.9
4METH_MYCLE (Q49775) Methionine synthase (EC 2.1.1.13) (5-methylt... 30 7.9

>EWG_DROME (Q24312) DNA-binding protein Ewg (Protein erect wing)|
          Length = 733

 Score = 33.9 bits (76), Expect = 0.42
 Identities = 23/65 (35%), Positives = 28/65 (43%)
 Frame = -1

Query: 623 LPTGRSLPTTGVDPTHPTTGVTHPAMVIATVQDPHTVTEGGGHAPMTVMFQHTTAGAILQ 444
           LP G +    GV   H   G        AT+Q   ++T+  GH  MTV    T  G I  
Sbjct: 569 LPDGTTAQVQGVATLHQGEGG-------ATIQTVQSLTDVNGHENMTVDLTETQDGQIYI 621

Query: 443 GTEDG 429
            TEDG
Sbjct: 622 TTEDG 626



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>METK_BACHD (Q9K7Q9) S-adenosylmethionine synthetase (EC 2.5.1.6) (Methionine|
           adenosyltransferase) (AdoMet synthetase) (MAT)
          Length = 399

 Score = 30.4 bits (67), Expect = 4.6
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = -1

Query: 419 AAYHHAGATPVAAPWRQKNQGAVLRRK 339
           AAY H G T V  PW Q ++  +LR++
Sbjct: 372 AAYGHFGRTDVELPWEQTDKAEILRQQ 398



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>CD2L7_HUMAN (Q9NYV4) Cell division cycle 2-related protein kinase 7 (EC|
           2.7.11.22) (CDC2-related protein kinase 7) (Cdc2-related
           kinase, arginine/serine-rich) (CrkRS)
          Length = 1490

 Score = 29.6 bits (65), Expect = 7.9
 Identities = 15/22 (68%), Positives = 16/22 (72%)
 Frame = -3

Query: 636 RSYSPSDRSESPYHRRRSYSPY 571
           RS S S RS SPY RRRS SP+
Sbjct: 315 RSGSYSGRSPSPYGRRRSSSPF 336



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>METH_MYCLE (Q49775) Methionine synthase (EC 2.1.1.13)|
           (5-methyltetrahydrofolate--homocysteine
           methyltransferase) (Methionine synthase, vitamin-B12
           dependent isozyme) (MS)
          Length = 1206

 Score = 29.6 bits (65), Expect = 7.9
 Identities = 16/47 (34%), Positives = 22/47 (46%)
 Frame = -1

Query: 539 ATVQDPHTVTEGGGHAPMTVMFQHTTAGAILQGTEDGVTLAAYHHAG 399
           A +     +T+ G H P+ V     T G +L G+E G  LAA    G
Sbjct: 179 AVLGSRRAMTQAGRHIPVFVHVTVETTGTMLLGSEIGAALAAVEPLG 225


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 83,409,382
Number of Sequences: 219361
Number of extensions: 1614169
Number of successful extensions: 5552
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5280
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5545
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 5972710590
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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