ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbah61l19
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 135 1e-28
2gb|AC133340.4| Oryza sativa chromosome 3 BAC clone OSJNBb0024J17... 135 1e-28
3dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 135 1e-28
4dbj|AK120304.1| Oryza sativa (japonica cultivar-group) cDNA clon... 135 1e-28
5dbj|AK098878.1| Oryza sativa (japonica cultivar-group) cDNA clon... 135 1e-28
6dbj|AK061719.1| Oryza sativa (japonica cultivar-group) cDNA clon... 135 1e-28
7gb|AF022740.1|AF022740 Oryza sativa glycolate oxidase (GOX) mRNA... 103 5e-19
8gb|AY108197.1| Zea mays PCO065133 mRNA sequence 86 1e-13
9ref|XM_476669.1| Oryza sativa (japonica cultivar-group), mRNA 74 5e-10
10ref|XM_506164.1| PREDICTED Oryza sativa (japonica cultivar-group... 74 5e-10
11dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 74 5e-10
12dbj|AP006163.4| Oryza sativa (japonica cultivar-group) genomic D... 74 5e-10
13dbj|AP005632.3| Oryza sativa (japonica cultivar-group) genomic D... 74 5e-10
14dbj|AK120929.1| Oryza sativa (japonica cultivar-group) cDNA clon... 74 5e-10
15dbj|AK103933.1| Oryza sativa (japonica cultivar-group) cDNA clon... 74 5e-10
16dbj|AK062189.1| Oryza sativa (japonica cultivar-group) cDNA clon... 74 5e-10
17ref|XM_473942.1| Oryza sativa (japonica cultivar-group), predic... 46 0.11
18emb|AL606645.2|OSJN00079 Oryza sativa genomic DNA, chromosome 4,... 46 0.11
19dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.11
20gb|AY173074.1| Zantedeschia aethiopica glycolate oxidase (gox) m... 46 0.11
21dbj|AK068638.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.11
22dbj|AK068129.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.11
23dbj|AK060221.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.11
24dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 44 0.42
25gb|CP000009.1| Gluconobacter oxydans 621H, complete genome 42 1.7
26gb|AC125735.1| Leishmania major strain Friedlin chromosome 3, co... 40 6.5
27gb|AC133710.4| Oryza sativa (japonica cultivar-group) chromosome... 40 6.5
28gb|AY248747.1| Xanthomonas campestris pv. vesicatoria OpgH (opgH... 40 6.5
29gb|AC136491.4| Oryza sativa (japonica cultivar-group) chromosome... 40 6.5
30emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete ... 40 6.5
31emb|BX897673.1| Neurospora crassa DNA linkage group III BAC clon... 40 6.5
32emb|BX957246.7| Zebrafish DNA sequence from clone CH211-89F7 in ... 40 6.5
33dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, c... 40 6.5
34gb|AC009371.7| Drosophila melanogaster 3L BAC RP98-44K7 (Roswell... 40 6.5
35gb|AE011690.1| Xanthomonas axonopodis pv. citri str. 306, secti... 40 6.5
36dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.5
37dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.5
38gb|AC005639.2|AC005639 Drosophila melanogaster, chromosome 2R, r... 40 6.5
39dbj|AK110285.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.5
40gb|AE003523.3| Drosophila melanogaster chromosome 3L, section 62... 40 6.5
41gb|AE003461.3| Drosophila melanogaster chromosome 2R, section 69... 40 6.5
42gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete... 40 6.5
43gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 40 6.5
44gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 6.5
45emb|AL935070.3|CNS08CCM Oryza sativa chromosome 12, . BAC OSJNBa... 40 6.5 
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  135 bits (68), Expect = 1e-28
 Identities = 110/124 (88%)
 Strand = Plus / Minus

                                                                            
Query: 361      cgaggcggtcgccctcggtgaagatgtgttcgcgggtgatgtcgctgagcttggtgcacc 420
                ||||||||||| | |||||| |||||||  ||||||||||||||  ||||  |||||| |
Sbjct: 32328144 cgaggcggtcggcgtcggtgtagatgtgggcgcgggtgatgtcggcgagcgaggtgcatc 32328085

                                                                            
Query: 421      cgccgagcgccatggtgagctcgaactcctcccgcatcatgcgcagcacgttccgcacgc 480
                ||| |||||||||||||||||||||||||||||||||||| ||||||||||||| ||| |
Sbjct: 32328084 cgctgagcgccatggtgagctcgaactcctcccgcatcatccgcagcacgttcctcaccc 32328025

                    
Query: 481      cggc 484
                ||||
Sbjct: 32328024 cggc 32328021
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>gb|AC133340.4| Oryza sativa chromosome 3 BAC clone OSJNBb0024J17, complete sequence
          Length = 102751

 Score =  135 bits (68), Expect = 1e-28
 Identities = 110/124 (88%)
 Strand = Plus / Minus

                                                                         
Query: 361   cgaggcggtcgccctcggtgaagatgtgttcgcgggtgatgtcgctgagcttggtgcacc 420
             ||||||||||| | |||||| |||||||  ||||||||||||||  ||||  |||||| |
Sbjct: 61911 cgaggcggtcggcgtcggtgtagatgtgggcgcgggtgatgtcggcgagcgaggtgcatc 61852

                                                                         
Query: 421   cgccgagcgccatggtgagctcgaactcctcccgcatcatgcgcagcacgttccgcacgc 480
             ||| |||||||||||||||||||||||||||||||||||| ||||||||||||| ||| |
Sbjct: 61851 cgctgagcgccatggtgagctcgaactcctcccgcatcatccgcagcacgttcctcaccc 61792

                 
Query: 481   cggc 484
             ||||
Sbjct: 61791 cggc 61788
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  135 bits (68), Expect = 1e-28
 Identities = 110/124 (88%)
 Strand = Plus / Minus

                                                                            
Query: 361      cgaggcggtcgccctcggtgaagatgtgttcgcgggtgatgtcgctgagcttggtgcacc 420
                ||||||||||| | |||||| |||||||  ||||||||||||||  ||||  |||||| |
Sbjct: 32418654 cgaggcggtcggcgtcggtgtagatgtgggcgcgggtgatgtcggcgagcgaggtgcatc 32418595

                                                                            
Query: 421      cgccgagcgccatggtgagctcgaactcctcccgcatcatgcgcagcacgttccgcacgc 480
                ||| |||||||||||||||||||||||||||||||||||| ||||||||||||| ||| |
Sbjct: 32418594 cgctgagcgccatggtgagctcgaactcctcccgcatcatccgcagcacgttcctcaccc 32418535

                    
Query: 481      cggc 484
                ||||
Sbjct: 32418534 cggc 32418531
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>dbj|AK120304.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013052N09, full
            insert sequence
          Length = 1526

 Score =  135 bits (68), Expect = 1e-28
 Identities = 110/124 (88%)
 Strand = Plus / Minus

                                                                        
Query: 361  cgaggcggtcgccctcggtgaagatgtgttcgcgggtgatgtcgctgagcttggtgcacc 420
            ||||||||||| | |||||| |||||||  ||||||||||||||  ||||  |||||| |
Sbjct: 1162 cgaggcggtcggcgtcggtgtagatgtgggcgcgggtgatgtcggcgagcgaggtgcatc 1103

                                                                        
Query: 421  cgccgagcgccatggtgagctcgaactcctcccgcatcatgcgcagcacgttccgcacgc 480
            ||| |||||||||||||||||||||||||||||||||||| ||||||||||||| ||| |
Sbjct: 1102 cgctgagcgccatggtgagctcgaactcctcccgcatcatccgcagcacgttcctcaccc 1043

                
Query: 481  cggc 484
            ||||
Sbjct: 1042 cggc 1039
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>dbj|AK098878.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001E15, full
            insert sequence
          Length = 1522

 Score =  135 bits (68), Expect = 1e-28
 Identities = 110/124 (88%)
 Strand = Plus / Minus

                                                                        
Query: 361  cgaggcggtcgccctcggtgaagatgtgttcgcgggtgatgtcgctgagcttggtgcacc 420
            ||||||||||| | |||||| |||||||  ||||||||||||||  ||||  |||||| |
Sbjct: 1158 cgaggcggtcggcgtcggtgtagatgtgggcgcgggtgatgtcggcgagcgaggtgcatc 1099

                                                                        
Query: 421  cgccgagcgccatggtgagctcgaactcctcccgcatcatgcgcagcacgttccgcacgc 480
            ||| |||||||||||||||||||||||||||||||||||| ||||||||||||| ||| |
Sbjct: 1098 cgctgagcgccatggtgagctcgaactcctcccgcatcatccgcagcacgttcctcaccc 1039

                
Query: 481  cggc 484
            ||||
Sbjct: 1038 cggc 1035
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>dbj|AK061719.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-037-H12, full
            insert sequence
          Length = 1586

 Score =  135 bits (68), Expect = 1e-28
 Identities = 110/124 (88%)
 Strand = Plus / Minus

                                                                        
Query: 361  cgaggcggtcgccctcggtgaagatgtgttcgcgggtgatgtcgctgagcttggtgcacc 420
            ||||||||||| | |||||| |||||||  ||||||||||||||  ||||  |||||| |
Sbjct: 1222 cgaggcggtcggcgtcggtgtagatgtgggcgcgggtgatgtcggcgagcgaggtgcatc 1163

                                                                        
Query: 421  cgccgagcgccatggtgagctcgaactcctcccgcatcatgcgcagcacgttccgcacgc 480
            ||| |||||||||||||||||||||||||||||||||||| ||||||||||||| ||| |
Sbjct: 1162 cgctgagcgccatggtgagctcgaactcctcccgcatcatccgcagcacgttcctcaccc 1103

                
Query: 481  cggc 484
            ||||
Sbjct: 1102 cggc 1099
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>gb|AF022740.1|AF022740 Oryza sativa glycolate oxidase (GOX) mRNA, complete cds
          Length = 1473

 Score =  103 bits (52), Expect = 5e-19
 Identities = 106/124 (85%)
 Strand = Plus / Minus

                                                                        
Query: 361  cgaggcggtcgccctcggtgaagatgtgttcgcgggtgatgtcgctgagcttggtgcacc 420
            ||||||| ||| | || ||| |||||||  ||||||||||||||  ||||  |||||| |
Sbjct: 1128 cgaggcgttcggcgtccgtgtagatgtgggcgcgggtgatgtcggcgagcgaggtgcatc 1069

                                                                        
Query: 421  cgccgagcgccatggtgagctcgaactcctcccgcatcatgcgcagcacgttccgcacgc 480
            ||| || ||||||||||||||||||||||||||||||||| ||||||| ||||| ||| |
Sbjct: 1068 cgctgaacgccatggtgagctcgaactcctcccgcatcatccgcagcaggttcctcaccc 1009

                
Query: 481  cggc 484
            ||||
Sbjct: 1008 cggc 1005
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>gb|AY108197.1| Zea mays PCO065133 mRNA sequence
          Length = 1667

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 85/99 (85%)
 Strand = Plus / Minus

                                                                        
Query: 374  ctcggtgaagatgtgttcgcgggtgatgtcgctgagcttggtgcacccgccgagcgccat 433
            |||||||| |||||| | ||||||||| |||  |||   |||||| |||| |||||||||
Sbjct: 1288 ctcggtgatgatgtgcttgcgggtgatttcggcgagggaggtgcagccgctgagcgccat 1229

                                                   
Query: 434  ggtgagctcgaactcctcccgcatcatgcgcagcacgtt 472
            ||||||||||||||| ||||||| ||||||||| |||||
Sbjct: 1228 ggtgagctcgaactcgtcccgcagcatgcgcaggacgtt 1190
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>ref|XM_476669.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1439

 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 97/117 (82%)
 Strand = Plus / Minus

                                                                        
Query: 368  gtcgccctcggtgaagatgtgttcgcgggtgatgtcgctgagcttggtgcacccgccgag 427
            |||| ||||||||| || ||| | |||||||||||||  |||   |||||| |||| |||
Sbjct: 1146 gtcggcctcggtgatgacgtggttgcgggtgatgtcggcgagggaggtgcagccgctgag 1087

                                                                     
Query: 428  cgccatggtgagctcgaactcctcccgcatcatgcgcagcacgttccgcacgccggc 484
            ||||||||||||||||||||| || || | |||  ||||||||||||| || |||||
Sbjct: 1086 cgccatggtgagctcgaactcgtcgcggagcatctgcagcacgttccggactccggc 1030
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>ref|XM_506164.1| PREDICTED Oryza sativa (japonica cultivar-group), B1364A02.11-1 mRNA
          Length = 1501

 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 97/117 (82%)
 Strand = Plus / Minus

                                                                        
Query: 368  gtcgccctcggtgaagatgtgttcgcgggtgatgtcgctgagcttggtgcacccgccgag 427
            |||| ||||||||| || ||| | |||||||||||||  |||   |||||| |||| |||
Sbjct: 1187 gtcggcctcggtgatgacgtggttgcgggtgatgtcggcgagggaggtgcagccgctgag 1128

                                                                     
Query: 428  cgccatggtgagctcgaactcctcccgcatcatgcgcagcacgttccgcacgccggc 484
            ||||||||||||||||||||| || || | |||  ||||||||||||| || |||||
Sbjct: 1127 cgccatggtgagctcgaactcgtcgcggagcatctgcagcacgttccggactccggc 1071
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 97/117 (82%)
 Strand = Plus / Minus

                                                                           
Query: 368     gtcgccctcggtgaagatgtgttcgcgggtgatgtcgctgagcttggtgcacccgccgag 427
               |||| ||||||||| || ||| | |||||||||||||  |||   |||||| |||| |||
Sbjct: 2833181 gtcggcctcggtgatgacgtggttgcgggtgatgtcggcgagggaggtgcagccgctgag 2833122

                                                                        
Query: 428     cgccatggtgagctcgaactcctcccgcatcatgcgcagcacgttccgcacgccggc 484
               ||||||||||||||||||||| || || | |||  ||||||||||||| || |||||
Sbjct: 2833121 cgccatggtgagctcgaactcgtcgcggagcatctgcagcacgttccggactccggc 2833065
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>dbj|AP006163.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:B1364A02
          Length = 137933

 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 97/117 (82%)
 Strand = Plus / Minus

                                                                          
Query: 368    gtcgccctcggtgaagatgtgttcgcgggtgatgtcgctgagcttggtgcacccgccgag 427
              |||| ||||||||| || ||| | |||||||||||||  |||   |||||| |||| |||
Sbjct: 136742 gtcggcctcggtgatgacgtggttgcgggtgatgtcggcgagggaggtgcagccgctgag 136683

                                                                       
Query: 428    cgccatggtgagctcgaactcctcccgcatcatgcgcagcacgttccgcacgccggc 484
              ||||||||||||||||||||| || || | |||  ||||||||||||| || |||||
Sbjct: 136682 cgccatggtgagctcgaactcgtcgcggagcatctgcagcacgttccggactccggc 136626
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>dbj|AP005632.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
            clone:OSJNBb0050B07
          Length = 142134

 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 97/117 (82%)
 Strand = Plus / Minus

                                                                        
Query: 368  gtcgccctcggtgaagatgtgttcgcgggtgatgtcgctgagcttggtgcacccgccgag 427
            |||| ||||||||| || ||| | |||||||||||||  |||   |||||| |||| |||
Sbjct: 3468 gtcggcctcggtgatgacgtggttgcgggtgatgtcggcgagggaggtgcagccgctgag 3409

                                                                     
Query: 428  cgccatggtgagctcgaactcctcccgcatcatgcgcagcacgttccgcacgccggc 484
            ||||||||||||||||||||| || || | |||  ||||||||||||| || |||||
Sbjct: 3408 cgccatggtgagctcgaactcgtcgcggagcatctgcagcacgttccggactccggc 3352
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>dbj|AK120929.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023036A14, full
            insert sequence
          Length = 1738

 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 97/117 (82%)
 Strand = Plus / Minus

                                                                        
Query: 368  gtcgccctcggtgaagatgtgttcgcgggtgatgtcgctgagcttggtgcacccgccgag 427
            |||| ||||||||| || ||| | |||||||||||||  |||   |||||| |||| |||
Sbjct: 1445 gtcggcctcggtgatgacgtggttgcgggtgatgtcggcgagggaggtgcagccgctgag 1386

                                                                     
Query: 428  cgccatggtgagctcgaactcctcccgcatcatgcgcagcacgttccgcacgccggc 484
            ||||||||||||||||||||| || || | |||  ||||||||||||| || |||||
Sbjct: 1385 cgccatggtgagctcgaactcgtcgcggagcatctgcagcacgttccggactccggc 1329
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>dbj|AK103933.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-E11, full
            insert sequence
          Length = 1439

 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 97/117 (82%)
 Strand = Plus / Minus

                                                                        
Query: 368  gtcgccctcggtgaagatgtgttcgcgggtgatgtcgctgagcttggtgcacccgccgag 427
            |||| ||||||||| || ||| | |||||||||||||  |||   |||||| |||| |||
Sbjct: 1146 gtcggcctcggtgatgacgtggttgcgggtgatgtcggcgagggaggtgcagccgctgag 1087

                                                                     
Query: 428  cgccatggtgagctcgaactcctcccgcatcatgcgcagcacgttccgcacgccggc 484
            ||||||||||||||||||||| || || | |||  ||||||||||||| || |||||
Sbjct: 1086 cgccatggtgagctcgaactcgtcgcggagcatctgcagcacgttccggactccggc 1030
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>dbj|AK062189.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-046-E08, full
            insert sequence
          Length = 1501

 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 97/117 (82%)
 Strand = Plus / Minus

                                                                        
Query: 368  gtcgccctcggtgaagatgtgttcgcgggtgatgtcgctgagcttggtgcacccgccgag 427
            |||| ||||||||| || ||| | |||||||||||||  |||   |||||| |||| |||
Sbjct: 1187 gtcggcctcggtgatgacgtggttgcgggtgatgtcggcgagggaggtgcagccgctgag 1128

                                                                     
Query: 428  cgccatggtgagctcgaactcctcccgcatcatgcgcagcacgttccgcacgccggc 484
            ||||||||||||||||||||| || || | |||  ||||||||||||| || |||||
Sbjct: 1127 cgccatggtgagctcgaactcgtcgcggagcatctgcagcacgttccggactccggc 1071
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>ref|XM_473942.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1104

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 59/71 (83%)
 Strand = Plus / Minus

                                                                        
Query: 414  gtgcacccgccgagcgccatggtgagctcgaactcctcccgcatcatgcgcagcacgttc 473
            ||||| |||| |||||||||||||||||| | ||| || || | |||  ||||||| |||
Sbjct: 1034 gtgcatccgctgagcgccatggtgagctccagctcgtcgcggagcatctgcagcaccttc 975

                       
Query: 474  cgcacgccggc 484
            | |||||||||
Sbjct: 974  ctcacgccggc 964
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>emb|AL606645.2|OSJN00079 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0053K19,
             complete sequence
          Length = 187601

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 59/71 (83%)
 Strand = Plus / Minus

                                                                         
Query: 414   gtgcacccgccgagcgccatggtgagctcgaactcctcccgcatcatgcgcagcacgttc 473
             ||||| |||| |||||||||||||| ||| | ||| || | || ||| |||||| |||||
Sbjct: 63428 gtgcagccgctgagcgccatggtgatctccagctcgtctctcagcatccgcagcgcgttc 63369

                        
Query: 474   cgcacgccggc 484
             | |||||||||
Sbjct: 63368 ctcacgccggc 63358



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 59/71 (83%)
 Strand = Plus / Minus

                                                                         
Query: 414   gtgcacccgccgagcgccatggtgagctcgaactcctcccgcatcatgcgcagcacgttc 473
             ||||| |||| |||||||||||||||||| | ||| || || | |||  ||||||| |||
Sbjct: 59360 gtgcatccgctgagcgccatggtgagctccagctcgtcgcggagcatctgcagcaccttc 59301

                        
Query: 474   cgcacgccggc 484
             | |||||||||
Sbjct: 59300 ctcacgccggc 59290
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 59/71 (83%)
 Strand = Plus / Minus

                                                                            
Query: 414      gtgcacccgccgagcgccatggtgagctcgaactcctcccgcatcatgcgcagcacgttc 473
                ||||| |||| |||||||||||||| ||| | ||| || | || ||| |||||| |||||
Sbjct: 31730158 gtgcagccgctgagcgccatggtgatctccagctcgtctctcagcatccgcagcgcgttc 31730099

                           
Query: 474      cgcacgccggc 484
                | |||||||||
Sbjct: 31730098 ctcacgccggc 31730088



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 59/71 (83%)
 Strand = Plus / Minus

                                                                            
Query: 414      gtgcacccgccgagcgccatggtgagctcgaactcctcccgcatcatgcgcagcacgttc 473
                ||||| |||| |||||||||||||||||| | ||| || || | |||  ||||||| |||
Sbjct: 31726090 gtgcatccgctgagcgccatggtgagctccagctcgtcgcggagcatctgcagcaccttc 31726031

                           
Query: 474      cgcacgccggc 484
                | |||||||||
Sbjct: 31726030 ctcacgccggc 31726020
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>gb|AY173074.1| Zantedeschia aethiopica glycolate oxidase (gox) mRNA, complete cds
          Length = 1486

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                   
Query: 429  gccatggtgagctcgaactcctc 451
            |||||||||||||||||||||||
Sbjct: 1115 gccatggtgagctcgaactcctc 1093
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>dbj|AK068638.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013156O03, full
            insert sequence
          Length = 1435

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 59/71 (83%)
 Strand = Plus / Minus

                                                                        
Query: 414  gtgcacccgccgagcgccatggtgagctcgaactcctcccgcatcatgcgcagcacgttc 473
            ||||| |||| |||||||||||||||||| | ||| || || | |||  ||||||| |||
Sbjct: 1103 gtgcatccgctgagcgccatggtgagctccagctcgtcgcggagcatctgcagcaccttc 1044

                       
Query: 474  cgcacgccggc 484
            | |||||||||
Sbjct: 1043 ctcacgccggc 1033
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>dbj|AK068129.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013131A08, full
            insert sequence
          Length = 1986

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 59/71 (83%)
 Strand = Plus / Minus

                                                                        
Query: 414  gtgcacccgccgagcgccatggtgagctcgaactcctcccgcatcatgcgcagcacgttc 473
            ||||| |||| |||||||||||||| ||| | ||| || | || ||| |||||| |||||
Sbjct: 1621 gtgcagccgctgagcgccatggtgatctccagctcgtctctcagcatccgcagcgcgttc 1562

                       
Query: 474  cgcacgccggc 484
            | |||||||||
Sbjct: 1561 ctcacgccggc 1551
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>dbj|AK060221.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-002-F07, full
            insert sequence
          Length = 1427

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 59/71 (83%)
 Strand = Plus / Minus

                                                                        
Query: 414  gtgcacccgccgagcgccatggtgagctcgaactcctcccgcatcatgcgcagcacgttc 473
            ||||| |||| |||||||||||||||||| | ||| || || | |||  ||||||| |||
Sbjct: 1107 gtgcatccgctgagcgccatggtgagctccagctcgtcgcggagcatctgcagcaccttc 1048

                       
Query: 474  cgcacgccggc 484
            | |||||||||
Sbjct: 1047 ctcacgccggc 1037
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>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 351    agcgggcgtccgaggcggtcgc 372
              ||||||||||||||||||||||
Sbjct: 277779 agcgggcgtccgaggcggtcgc 277800



 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 345     ctcggcagcgggcgtccgag 364
               ||||||||||||||||||||
Sbjct: 5814716 ctcggcagcgggcgtccgag 5814697
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>gb|CP000009.1| Gluconobacter oxydans 621H, complete genome
          Length = 2702173

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 442     cgaactcctcccgcatcatgcgcag 466
               |||| ||||||||||||||||||||
Sbjct: 2682575 cgaaatcctcccgcatcatgcgcag 2682551
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>gb|AC125735.1| Leishmania major strain Friedlin chromosome 3, complete sequence
          Length = 384518

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 448    cctcccgcatcatgcgcagcacgttccg 475
              ||||||||||||||||| |||| |||||
Sbjct: 284029 cctcccgcatcatgcgctgcactttccg 284056
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>gb|AC133710.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0002A19, complete sequence
          Length = 139052

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 90    ggtgcgaaatatggtggaaatggcgaga 117
             |||||||||| |||||||||||| ||||
Sbjct: 29983 ggtgcgaaatttggtggaaatggagaga 29956
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>gb|AY248747.1| Xanthomonas campestris pv. vesicatoria OpgH (opgH) gene, complete cds
          Length = 3005

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 383  gatgtgttcgcgggtgatgtcgctgagc 410
            |||||| ||||||||| |||||||||||
Sbjct: 1051 gatgtgctcgcgggtggtgtcgctgagc 1024
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>gb|AC136491.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0062E06,
              complete sequence
          Length = 158842

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 90     ggtgcgaaatatggtggaaatggcgaga 117
              |||||||||| |||||||||||| ||||
Sbjct: 158442 ggtgcgaaatttggtggaaatggagaga 158415
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>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome
          Length = 5178466

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 383    gatgtgttcgcgggtgatgtcgctgagc 410
              |||||| ||||||||| |||||||||||
Sbjct: 766325 gatgtgctcgcgggtggtgtcgctgagc 766298
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>emb|BX897673.1| Neurospora crassa DNA linkage group III BAC clone B13M15
          Length = 63598

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 240   gtgcgttgcgttgcgttgcg 259
             ||||||||||||||||||||
Sbjct: 42541 gtgcgttgcgttgcgttgcg 42560
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>emb|BX957246.7| Zebrafish DNA sequence from clone CH211-89F7 in linkage group 5, complete
              sequence
          Length = 186135

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 64     acatggaaatacaatatggt 83
              ||||||||||||||||||||
Sbjct: 166707 acatggaaatacaatatggt 166688
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>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome
          Length = 4940217

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                           
Query: 383     gatgtgttcgcgggtgatgtcgctgagc 410
               |||||| ||||||||| |||||||||||
Sbjct: 4277328 gatgtgctcgcgggtggtgtcgctgagc 4277355
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>gb|AC009371.7| Drosophila melanogaster 3L BAC RP98-44K7 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 174645

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 240   gtgcgttgcgttgcgttgcg 259
             ||||||||||||||||||||
Sbjct: 26559 gtgcgttgcgttgcgttgcg 26540
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>gb|AE011690.1| Xanthomonas axonopodis pv. citri str. 306,  section 68 of 469 of the
            complete genome
          Length = 11141

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 383  gatgtgttcgcgggtgatgtcgctgagc 410
            |||||| ||||||||| |||||||||||
Sbjct: 3644 gatgtgctcgcgggtggtgtcgctgagc 3617
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 14       atgtatgataaatacagaat 33
                ||||||||||||||||||||
Sbjct: 22849581 atgtatgataaatacagaat 22849562
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                            
Query: 90       ggtgcgaaatatggtggaaatggcgaga 117
                |||||||||| |||||||||||| ||||
Sbjct: 17868791 ggtgcgaaatttggtggaaatggagaga 17868764
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>gb|AC005639.2|AC005639 Drosophila melanogaster, chromosome 2R, region 59E3-59F4, BAC clone
             BACR48M01, complete sequence
          Length = 188272

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 240   gtgcgttgcgttgcgttgcg 259
             ||||||||||||||||||||
Sbjct: 77465 gtgcgttgcgttgcgttgcg 77484
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>dbj|AK110285.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-163-E12, full
           insert sequence
          Length = 2833

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 240 gtgcgttgcgttgcgttgcg 259
           ||||||||||||||||||||
Sbjct: 859 gtgcgttgcgttgcgttgcg 878
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>gb|AE003523.3| Drosophila melanogaster chromosome 3L, section 62 of 83 of the
            complete sequence
          Length = 290640

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 240  gtgcgttgcgttgcgttgcg 259
            ||||||||||||||||||||
Sbjct: 5027 gtgcgttgcgttgcgttgcg 5008
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>gb|AE003461.3| Drosophila melanogaster chromosome 2R, section 69 of 73 of the complete
              sequence
          Length = 598988

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 240    gtgcgttgcgttgcgttgcg 259
              ||||||||||||||||||||
Sbjct: 111005 gtgcgttgcgttgcgttgcg 111024
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>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome
          Length = 4941439

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                           
Query: 383     gatgtgttcgcgggtgatgtcgctgagc 410
               |||||| ||||||||| |||||||||||
Sbjct: 4284118 gatgtgctcgcgggtggtgtcgctgagc 4284145
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                            
Query: 90       ggtgcgaaatatggtggaaatggcgaga 117
                |||||||||| |||||||||||| ||||
Sbjct: 17963108 ggtgcgaaatttggtggaaatggagaga 17963081
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 14       atgtatgataaatacagaat 33
                ||||||||||||||||||||
Sbjct: 22777772 atgtatgataaatacagaat 22777753
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>emb|AL935070.3|CNS08CCM Oryza sativa chromosome 12, . BAC OSJNBa0040P10 of library OSJNBa from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 148705

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 14     atgtatgataaatacagaat 33
              ||||||||||||||||||||
Sbjct: 107263 atgtatgataaatacagaat 107282


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,650,271
Number of Sequences: 3902068
Number of extensions: 2650271
Number of successful extensions: 45364
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 44832
Number of HSP's gapped (non-prelim): 519
length of query: 484
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 462
effective length of database: 17,147,199,772
effective search space: 7922006294664
effective search space used: 7922006294664
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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