Clone Name | rbah61l17 |
---|---|
Clone Library Name | barley_pub |
>ref|NM_185280.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1101 Score = 281 bits (142), Expect = 1e-72 Identities = 274/318 (86%) Strand = Plus / Minus Query: 265 ttaagaggagaaagctgaaagaatgttcttcttgatggcgaattcatcggctttggaagg 324 |||||||||||||| ||||| ||||||||||||||| |||||||||||||||||||||| Sbjct: 1101 ttaagaggagaaagtcgaaaggatgttcttcttgatgacgaattcatcggctttggaagg 1042 Query: 325 actgatcgacttctccaacaagcgatggagcctctcagtttccttctttgtatagtcaga 384 |||||||||||||||||||| ||| || |||||||||| ||||||||| || || ||||| Sbjct: 1041 actgatcgacttctccaacatgcgttgaagcctctcagattccttcttagtgtattcaga 982 Query: 385 gcccttctgcaatatcttctttgcaacgttcacatagatctttccgtgcttgacagcagg 444 |||||||| || |||||||||||| |||||||||||||||||||| |||| ||||||| Sbjct: 981 gcccttctccatgatcttctttgcagagttcacatagatctttccgtacttggcagcagg 922 Query: 445 accactgagctttgcagcctcctcttcaattttagagaggatttccttccgcttgtcatc 504 ||| ||||||| ||| | |||||||| ||||| |||||| ||| |||||||| |||| Sbjct: 921 gccagtgagcttcgcaacatcctcttccattttggagagggcttctttccgcttatcatt 862 Query: 505 agcggcactgtggaaatccttgacaagagcatccaaacttgccacaagcccagcctctga 564 || |||| |||| ||||| ||||||| | |||| ||| | |||| ||||||||||| Sbjct: 861 tgctgcaccaaggaactccttcacaagaggagccaagctttcgacaatgccagcctctga 802 Query: 565 agtaagctgaccctttga 582 |||||||||||||||||| Sbjct: 801 agtaagctgaccctttga 784
>dbj|AK103944.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-014-A01, full insert sequence Length = 1431 Score = 281 bits (142), Expect = 1e-72 Identities = 274/318 (86%) Strand = Plus / Minus Query: 265 ttaagaggagaaagctgaaagaatgttcttcttgatggcgaattcatcggctttggaagg 324 |||||||||||||| ||||| ||||||||||||||| |||||||||||||||||||||| Sbjct: 1115 ttaagaggagaaagtcgaaaggatgttcttcttgatgacgaattcatcggctttggaagg 1056 Query: 325 actgatcgacttctccaacaagcgatggagcctctcagtttccttctttgtatagtcaga 384 |||||||||||||||||||| ||| || |||||||||| ||||||||| || || ||||| Sbjct: 1055 actgatcgacttctccaacatgcgttgaagcctctcagattccttcttagtgtattcaga 996 Query: 385 gcccttctgcaatatcttctttgcaacgttcacatagatctttccgtgcttgacagcagg 444 |||||||| || |||||||||||| |||||||||||||||||||| |||| ||||||| Sbjct: 995 gcccttctccatgatcttctttgcagagttcacatagatctttccgtacttggcagcagg 936 Query: 445 accactgagctttgcagcctcctcttcaattttagagaggatttccttccgcttgtcatc 504 ||| ||||||| ||| | |||||||| ||||| |||||| ||| |||||||| |||| Sbjct: 935 gccagtgagcttcgcaacatcctcttccattttggagagggcttctttccgcttatcatt 876 Query: 505 agcggcactgtggaaatccttgacaagagcatccaaacttgccacaagcccagcctctga 564 || |||| |||| ||||| ||||||| | |||| ||| | |||| ||||||||||| Sbjct: 875 tgctgcaccaaggaactccttcacaagaggagccaagctttcgacaatgccagcctctga 816 Query: 565 agtaagctgaccctttga 582 |||||||||||||||||| Sbjct: 815 agtaagctgaccctttga 798
>dbj|AK098931.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013023F18, full insert sequence Length = 1522 Score = 281 bits (142), Expect = 1e-72 Identities = 274/318 (86%) Strand = Plus / Minus Query: 265 ttaagaggagaaagctgaaagaatgttcttcttgatggcgaattcatcggctttggaagg 324 |||||||||||||| ||||| ||||||||||||||| |||||||||||||||||||||| Sbjct: 1156 ttaagaggagaaagtcgaaaggatgttcttcttgatgacgaattcatcggctttggaagg 1097 Query: 325 actgatcgacttctccaacaagcgatggagcctctcagtttccttctttgtatagtcaga 384 |||||||||||||||||||| ||| || |||||||||| ||||||||| || || ||||| Sbjct: 1096 actgatcgacttctccaacatgcgttgaagcctctcagattccttcttagtgtattcaga 1037 Query: 385 gcccttctgcaatatcttctttgcaacgttcacatagatctttccgtgcttgacagcagg 444 |||||||| || |||||||||||| |||||||||||||||||||| |||| ||||||| Sbjct: 1036 gcccttctccatgatcttctttgcagagttcacatagatctttccgtacttggcagcagg 977 Query: 445 accactgagctttgcagcctcctcttcaattttagagaggatttccttccgcttgtcatc 504 ||| ||||||| ||| | |||||||| ||||| |||||| ||| |||||||| |||| Sbjct: 976 gccagtgagcttcgcaacatcctcttccattttggagagggcttctttccgcttatcatt 917 Query: 505 agcggcactgtggaaatccttgacaagagcatccaaacttgccacaagcccagcctctga 564 || |||| |||| ||||| ||||||| | |||| ||| | |||| ||||||||||| Sbjct: 916 tgctgcaccaaggaactccttcacaagaggagccaagctttcgacaatgccagcctctga 857 Query: 565 agtaagctgaccctttga 582 |||||||||||||||||| Sbjct: 856 agtaagctgaccctttga 839
>dbj|AK062024.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-043-G03, full insert sequence Length = 1544 Score = 281 bits (142), Expect = 1e-72 Identities = 274/318 (86%) Strand = Plus / Minus Query: 265 ttaagaggagaaagctgaaagaatgttcttcttgatggcgaattcatcggctttggaagg 324 |||||||||||||| ||||| ||||||||||||||| |||||||||||||||||||||| Sbjct: 1158 ttaagaggagaaagtcgaaaggatgttcttcttgatgacgaattcatcggctttggaagg 1099 Query: 325 actgatcgacttctccaacaagcgatggagcctctcagtttccttctttgtatagtcaga 384 |||||||||||||||||||| ||| || |||||||||| ||||||||| || || ||||| Sbjct: 1098 actgatcgacttctccaacatgcgttgaagcctctcagattccttcttagtgtattcaga 1039 Query: 385 gcccttctgcaatatcttctttgcaacgttcacatagatctttccgtgcttgacagcagg 444 |||||||| || |||||||||||| |||||||||||||||||||| |||| ||||||| Sbjct: 1038 gcccttctccatgatcttctttgcagagttcacatagatctttccgtacttggcagcagg 979 Query: 445 accactgagctttgcagcctcctcttcaattttagagaggatttccttccgcttgtcatc 504 ||| ||||||| ||| | |||||||| ||||| |||||| ||| |||||||| |||| Sbjct: 978 gccagtgagcttcgcaacatcctcttccattttggagagggcttctttccgcttatcatt 919 Query: 505 agcggcactgtggaaatccttgacaagagcatccaaacttgccacaagcccagcctctga 564 || |||| |||| ||||| ||||||| | |||| ||| | |||| ||||||||||| Sbjct: 918 tgctgcaccaaggaactccttcacaagaggagccaagctttcgacaatgccagcctctga 859 Query: 565 agtaagctgaccctttga 582 |||||||||||||||||| Sbjct: 858 agtaagctgaccctttga 841
>dbj|AK099341.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033028P21, full insert sequence Length = 1528 Score = 260 bits (131), Expect = 5e-66 Identities = 274/321 (85%), Gaps = 3/321 (0%) Strand = Plus / Minus Query: 265 ttaagaggagaaagctgaaagaatgttcttcttgatggcgaattcatcggctttggaagg 324 |||||||||||||| ||||| ||||||||||||||| |||||||||||||||||||||| Sbjct: 1162 ttaagaggagaaagtcgaaaggatgttcttcttgatgacgaattcatcggctttggaagg 1103 Query: 325 actgatcgacttctccaacaagcgatggagcctctcagtttccttctttgtatagtcaga 384 |||||||||||||||||||| ||| || |||||||||| ||||||||| || || ||||| Sbjct: 1102 actgatcgacttctccaacatgcgttgaagcctctcagattccttcttagtgtattcaga 1043 Query: 385 gcccttctgcaatatcttctttgcaacgttcacatagatctttccgtgc---ttgacagc 441 |||||||| || |||||||||||| |||||||||||||||||||| | ||| |||| Sbjct: 1042 gcccttctccatgatcttctttgcagagttcacatagatctttccgtacctgttggcagc 983 Query: 442 aggaccactgagctttgcagcctcctcttcaattttagagaggatttccttccgcttgtc 501 ||| ||| ||||||| ||| | |||||||| ||||| |||||| ||| |||||||| || Sbjct: 982 agggccagtgagcttcgcaacatcctcttccattttggagagggcttctttccgcttatc 923 Query: 502 atcagcggcactgtggaaatccttgacaagagcatccaaacttgccacaagcccagcctc 561 || || |||| |||| ||||| ||||||| | |||| ||| | |||| |||||||| Sbjct: 922 atttgctgcaccaaggaactccttcacaagaggagccaagctttcgacaatgccagcctc 863 Query: 562 tgaagtaagctgaccctttga 582 ||||||||||||||||||||| Sbjct: 862 tgaagtaagctgaccctttga 842
>gb|BT016699.1| Zea mays clone Contig532 mRNA sequence Length = 1425 Score = 226 bits (114), Expect = 6e-56 Identities = 240/282 (85%) Strand = Plus / Minus Query: 281 gaaagaatgttcttcttgatggcgaattcatcggctttggaaggactgatcgacttctcc 340 ||||||||||||||||| | | ||||||||| ||||||||||||||||| ||||||||| Sbjct: 1088 gaaagaatgttcttcttaacgatgaattcatcagctttggaaggactgattgacttctcc 1029 Query: 341 aacaagcgatggagcctctcagtttccttctttgtatagtcagagcccttctgcaatatc 400 | || ||| || ||||||||||| |||||||| || |||||||||||||| | | ||| Sbjct: 1028 agcatgcggtgaagcctctcagtctccttcttagtgtagtcagagcccttgtctatgatc 969 Query: 401 ttctttgcaacgttcacatagatctttccgtgcttgacagcaggaccactgagctttgca 460 ||||||||| | ||||||| |||||||| |||||| | |||| ||| |||||||| ||| Sbjct: 968 ttctttgcagctgtcacatatatctttccatgcttggctgcagaaccgctgagcttagca 909 Query: 461 gcctcctcttcaattttagagaggatttccttccgcttgtcatcagcggcactgtggaaa 520 | |||||||| ||||||||||||| ||||||||||||||||||||| ||| || | || Sbjct: 908 acatcctcttctattttagagaggacttccttccgcttgtcatcagcagcattgagaaac 849 Query: 521 tccttgacaagagcatccaaacttgccacaagcccagcctct 562 ||||| ||||||| || ||| |||| |||||||||||||||| Sbjct: 848 tccttcacaagaggattcaagcttggcacaagcccagcctct 807
>gb|AY739289.1| Zea mays protein disulfide isomerase (PDIL2-2) mRNA, complete cds Length = 1408 Score = 226 bits (114), Expect = 6e-56 Identities = 240/282 (85%) Strand = Plus / Minus Query: 281 gaaagaatgttcttcttgatggcgaattcatcggctttggaaggactgatcgacttctcc 340 ||||||||||||||||| | | ||||||||| ||||||||||||||||| ||||||||| Sbjct: 1093 gaaagaatgttcttcttaacgatgaattcatcagctttggaaggactgattgacttctcc 1034 Query: 341 aacaagcgatggagcctctcagtttccttctttgtatagtcagagcccttctgcaatatc 400 | || ||| || ||||||||||| |||||||| || |||||||||||||| | | ||| Sbjct: 1033 agcatgcggtgaagcctctcagtctccttcttagtgtagtcagagcccttgtctatgatc 974 Query: 401 ttctttgcaacgttcacatagatctttccgtgcttgacagcaggaccactgagctttgca 460 ||||||||| | ||||||| |||||||| |||||| | |||| ||| |||||||| ||| Sbjct: 973 ttctttgcagctgtcacatatatctttccatgcttggctgcagaaccgctgagcttagca 914 Query: 461 gcctcctcttcaattttagagaggatttccttccgcttgtcatcagcggcactgtggaaa 520 | |||||||| ||||||||||||| ||||||||||||||||||||| ||| || | || Sbjct: 913 acatcctcttctattttagagaggacttccttccgcttgtcatcagcagcattgagaaac 854 Query: 521 tccttgacaagagcatccaaacttgccacaagcccagcctct 562 ||||| ||||||| || ||| |||| |||||||||||||||| Sbjct: 853 tccttcacaagaggattcaagcttggcacaagcccagcctct 812
>gb|AC087551.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0431G05, complete sequence Length = 145044 Score = 109 bits (55), Expect = 1e-20 Identities = 67/71 (94%) Strand = Plus / Plus Query: 265 ttaagaggagaaagctgaaagaatgttcttcttgatggcgaattcatcggctttggaagg 324 |||||||||||||| ||||| ||||||||||||||| |||||||||||||||||||||| Sbjct: 112409 ttaagaggagaaagtcgaaaggatgttcttcttgatgacgaattcatcggctttggaagg 112468 Query: 325 actgatcgact 335 ||||||||||| Sbjct: 112469 actgatcgact 112479 Score = 99.6 bits (50), Expect = 1e-17 Identities = 86/98 (87%) Strand = Plus / Plus Query: 334 cttctccaacaagcgatggagcctctcagtttccttctttgtatagtcagagcccttctg 393 ||||||||||| ||| || |||||||||| ||||||||| || || ||||||||||||| Sbjct: 112568 cttctccaacatgcgttgaagcctctcagattccttcttagtgtattcagagcccttctc 112627 Query: 394 caatatcttctttgcaacgttcacatagatctttccgt 431 || |||||||||||| |||||||||||||||||||| Sbjct: 112628 catgatcttctttgcagagttcacatagatctttccgt 112665 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Plus Query: 558 cctctgaagtaagctgaccctttga 582 ||||||||||||||||||||||||| Sbjct: 112960 cctctgaagtaagctgaccctttga 112984
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 109 bits (55), Expect = 1e-20 Identities = 67/71 (94%) Strand = Plus / Plus Query: 265 ttaagaggagaaagctgaaagaatgttcttcttgatggcgaattcatcggctttggaagg 324 |||||||||||||| ||||| ||||||||||||||| |||||||||||||||||||||| Sbjct: 3234692 ttaagaggagaaagtcgaaaggatgttcttcttgatgacgaattcatcggctttggaagg 3234751 Query: 325 actgatcgact 335 ||||||||||| Sbjct: 3234752 actgatcgact 3234762 Score = 99.6 bits (50), Expect = 1e-17 Identities = 86/98 (87%) Strand = Plus / Plus Query: 334 cttctccaacaagcgatggagcctctcagtttccttctttgtatagtcagagcccttctg 393 ||||||||||| ||| || |||||||||| ||||||||| || || ||||||||||||| Sbjct: 3234851 cttctccaacatgcgttgaagcctctcagattccttcttagtgtattcagagcccttctc 3234910 Query: 394 caatatcttctttgcaacgttcacatagatctttccgt 431 || |||||||||||| |||||||||||||||||||| Sbjct: 3234911 catgatcttctttgcagagttcacatagatctttccgt 3234948 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Plus Query: 558 cctctgaagtaagctgaccctttga 582 ||||||||||||||||||||||||| Sbjct: 3235243 cctctgaagtaagctgaccctttga 3235267
>gb|AC087425.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0676G05, complete sequence Length = 167317 Score = 109 bits (55), Expect = 1e-20 Identities = 67/71 (94%) Strand = Plus / Plus Query: 265 ttaagaggagaaagctgaaagaatgttcttcttgatggcgaattcatcggctttggaagg 324 |||||||||||||| ||||| ||||||||||||||| |||||||||||||||||||||| Sbjct: 28516 ttaagaggagaaagtcgaaaggatgttcttcttgatgacgaattcatcggctttggaagg 28575 Query: 325 actgatcgact 335 ||||||||||| Sbjct: 28576 actgatcgact 28586 Score = 99.6 bits (50), Expect = 1e-17 Identities = 86/98 (87%) Strand = Plus / Plus Query: 334 cttctccaacaagcgatggagcctctcagtttccttctttgtatagtcagagcccttctg 393 ||||||||||| ||| || |||||||||| ||||||||| || || ||||||||||||| Sbjct: 28675 cttctccaacatgcgttgaagcctctcagattccttcttagtgtattcagagcccttctc 28734 Query: 394 caatatcttctttgcaacgttcacatagatctttccgt 431 || |||||||||||| |||||||||||||||||||| Sbjct: 28735 catgatcttctttgcagagttcacatagatctttccgt 28772 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Plus Query: 558 cctctgaagtaagctgaccctttga 582 ||||||||||||||||||||||||| Sbjct: 29067 cctctgaagtaagctgaccctttga 29091
>ref|NM_183927.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1116 Score = 89.7 bits (45), Expect = 1e-14 Identities = 132/161 (81%) Strand = Plus / Minus Query: 419 tagatctttccgtgcttgacagcaggaccactgagctttgcagcctcctcttcaatttta 478 |||| |||||| ||||| |||||| |||||||||||| || |||||||||| || || Sbjct: 962 tagacctttccatgctttgcagcagaaccactgagcttcacaacctcctcttccatattg 903 Query: 479 gagaggatttccttccgcttgtcatcagcggcactgtggaaatccttgacaagagcatcc 538 ||||||||||||||||||||||||| || |||| |||| ||||| | || |||||| Sbjct: 902 gagaggatttccttccgcttgtcattggcagcaccaaggaactcctttgcgagggcatcc 843 Query: 539 aaacttgccacaagcccagcctctgaagtaagctgaccctt 579 |||||||| | |||| |||||||||||||| || ||||| Sbjct: 842 aaacttgctatgcgccccgcctctgaagtaagttggccctt 802 Score = 83.8 bits (42), Expect = 6e-13 Identities = 87/102 (85%) Strand = Plus / Minus Query: 280 tgaaagaatgttcttcttgatggcgaattcatcggctttggaaggactgatcgacttctc 339 |||||| | ||||||||||||| |||||||||||| || || || ||||| |||||||| Sbjct: 1101 tgaaaggacgttcttcttgatgatgaattcatcggcctttgatgggctgatggacttctc 1042 Query: 340 caacaagcgatggagcctctcagtttccttctttgtatagtc 381 ||||| ||| | |||||||| ||||||||||| |||||||| Sbjct: 1041 caacatgcgttcaagcctctctgtttccttcttggtatagtc 1000
>dbj|AK066111.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013050J24, full insert sequence Length = 1549 Score = 89.7 bits (45), Expect = 1e-14 Identities = 132/161 (81%) Strand = Plus / Minus Query: 419 tagatctttccgtgcttgacagcaggaccactgagctttgcagcctcctcttcaatttta 478 |||| |||||| ||||| |||||| |||||||||||| || |||||||||| || || Sbjct: 1075 tagacctttccatgctttgcagcagaaccactgagcttcacaacctcctcttccatattg 1016 Query: 479 gagaggatttccttccgcttgtcatcagcggcactgtggaaatccttgacaagagcatcc 538 ||||||||||||||||||||||||| || |||| |||| ||||| | || |||||| Sbjct: 1015 gagaggatttccttccgcttgtcattggcagcaccaaggaactcctttgcgagggcatcc 956 Query: 539 aaacttgccacaagcccagcctctgaagtaagctgaccctt 579 |||||||| | |||| |||||||||||||| || ||||| Sbjct: 955 aaacttgctatgcgccccgcctctgaagtaagttggccctt 915 Score = 83.8 bits (42), Expect = 6e-13 Identities = 87/102 (85%) Strand = Plus / Minus Query: 280 tgaaagaatgttcttcttgatggcgaattcatcggctttggaaggactgatcgacttctc 339 |||||| | ||||||||||||| |||||||||||| || || || ||||| |||||||| Sbjct: 1214 tgaaaggacgttcttcttgatgatgaattcatcggcctttgatgggctgatggacttctc 1155 Query: 340 caacaagcgatggagcctctcagtttccttctttgtatagtc 381 ||||| ||| | |||||||| ||||||||||| |||||||| Sbjct: 1154 caacatgcgttcaagcctctctgtttccttcttggtatagtc 1113
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 75.8 bits (38), Expect = 1e-10 Identities = 59/66 (89%) Strand = Plus / Minus Query: 438 cagcaggaccactgagctttgcagcctcctcttcaattttagagaggatttccttccgct 497 |||||| |||||||||||| || |||||||||| || || ||||||||||||||||||| Sbjct: 13339689 cagcagaaccactgagcttcacaacctcctcttccatattggagaggatttccttccgct 13339630 Query: 498 tgtcat 503 |||||| Sbjct: 13339629 tgtcat 13339624 Score = 48.1 bits (24), Expect = 0.032 Identities = 42/48 (87%) Strand = Plus / Minus Query: 334 cttctccaacaagcgatggagcctctcagtttccttctttgtatagtc 381 ||||||||||| ||| | |||||||| ||||||||||| |||||||| Sbjct: 13339884 cttctccaacatgcgttcaagcctctctgtttccttcttggtatagtc 13339837 Score = 40.1 bits (20), Expect = 7.9 Identities = 32/36 (88%) Strand = Plus / Minus Query: 280 tgaaagaatgttcttcttgatggcgaattcatcggc 315 |||||| | ||||||||||||| |||||||||||| Sbjct: 13340044 tgaaaggacgttcttcttgatgatgaattcatcggc 13340009
>dbj|AP003331.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1088D01 Length = 146144 Score = 75.8 bits (38), Expect = 1e-10 Identities = 59/66 (89%) Strand = Plus / Minus Query: 438 cagcaggaccactgagctttgcagcctcctcttcaattttagagaggatttccttccgct 497 |||||| |||||||||||| || |||||||||| || || ||||||||||||||||||| Sbjct: 80047 cagcagaaccactgagcttcacaacctcctcttccatattggagaggatttccttccgct 79988 Query: 498 tgtcat 503 |||||| Sbjct: 79987 tgtcat 79982 Score = 48.1 bits (24), Expect = 0.032 Identities = 42/48 (87%) Strand = Plus / Minus Query: 334 cttctccaacaagcgatggagcctctcagtttccttctttgtatagtc 381 ||||||||||| ||| | |||||||| ||||||||||| |||||||| Sbjct: 80242 cttctccaacatgcgttcaagcctctctgtttccttcttggtatagtc 80195 Score = 40.1 bits (20), Expect = 7.9 Identities = 32/36 (88%) Strand = Plus / Minus Query: 280 tgaaagaatgttcttcttgatggcgaattcatcggc 315 |||||| | ||||||||||||| |||||||||||| Sbjct: 80402 tgaaaggacgttcttcttgatgatgaattcatcggc 80367
>gb|AY739288.1| Zea mays protein disulfide isomerase (PDIL2-1) mRNA, complete cds Length = 1447 Score = 69.9 bits (35), Expect = 9e-09 Identities = 182/231 (78%) Strand = Plus / Minus Query: 272 gagaaagctgaaagaatgttcttcttgatggcgaattcatcggctttggaaggactgatc 331 ||||||| ||||||| ||||||||||||| || || ||||| ||||| || ||||| Sbjct: 1117 gagaaagtcgaaagaacgttcttcttgatgataaactcgtcggccttggaggggctgatg 1058 Query: 332 gacttctccaacaagcgatggagcctctcagtttccttctttgtatagtcagagcccttc 391 ||||||||||| | ||||| ||||||| |||||||||| ||||| || ||| ||| Sbjct: 1057 gacttctccaagatgcgatcaagcctcttggtttccttctcagtatactcgttgcctttc 998 Query: 392 tgcaatatcttctttgcaacgttcacatagatctttccgtgcttgacagcaggaccactg 451 | | ||||||||||| | | | ||||||| |||||| ||| | |||||| ||||||| Sbjct: 997 tctagaatcttctttgcgatggttacatagacctttccatgccttgcagcagaaccactg 938 Query: 452 agctttgcagcctcctcttcaattttagagaggatttccttccgcttgtca 502 ||||| | |||||||| || || | ||||||| |||||| ||||||||| Sbjct: 937 agcttatctgcctcctcctccatactggagaggacttcctttcgcttgtca 887
>emb|CR788228.11| Zebrafish DNA sequence from clone CH211-15N4 in linkage group 3, complete sequence Length = 156998 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 35 ttgagtaaactcttaaagagt 55 ||||||||||||||||||||| Sbjct: 3719 ttgagtaaactcttaaagagt 3699
>gb|AC010853.11| Homo sapiens chromosome 18, clone RP11-349D12, complete sequence Length = 184396 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 161 ctctattttccttttgtcttt 181 ||||||||||||||||||||| Sbjct: 74038 ctctattttccttttgtcttt 74018
>gb|AC154118.6| Mus musculus chromosome 19, clone RP24-340C10, complete sequence Length = 141422 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 169 tccttttgtctttcttcgcttctct 193 ||||||||||||||||| ||||||| Sbjct: 83077 tccttttgtctttcttctcttctct 83101
>emb|BX296558.8| Zebrafish DNA sequence from clone CH211-261N20 in linkage group 3, complete sequence Length = 151242 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 35 ttgagtaaactcttaaagagt 55 ||||||||||||||||||||| Sbjct: 148900 ttgagtaaactcttaaagagt 148880
>gb|AC142293.2| Homo sapiens fosmid clone XXFOS-8806F2 from 4, complete sequence Length = 32823 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 391 ctgcaatatcttctttgcaac 411 ||||||||||||||||||||| Sbjct: 18966 ctgcaatatcttctttgcaac 18946
>emb|AL606976.25| Mouse DNA sequence from clone RP23-113P22 on chromosome 4, complete sequence Length = 169465 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 147 gccatctctctaatctctattttcctttt 175 |||||||||||| |||| ||||||||||| Sbjct: 135130 gccatctctctagtctccattttcctttt 135102
>gb|AC166823.3| Mus musculus BAC clone RP23-435F22 from chromosome 14, complete sequence Length = 221537 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 92 acatgttgttcaacagagaa 111 |||||||||||||||||||| Sbjct: 169248 acatgttgttcaacagagaa 169267
>gb|AC163281.3| Mus musculus BAC clone RP23-443B19 from chromosome 8, complete sequence Length = 197609 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 157 taatctctattttccttttgtctt 180 |||||| ||||||||||||||||| Sbjct: 43611 taatctttattttccttttgtctt 43588
>ref|XM_477491.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2010 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 286 aatgttcttcttgatggcga 305 |||||||||||||||||||| Sbjct: 1435 aatgttcttcttgatggcga 1454
>gb|AC121116.7| Mus musculus chromosome 8, clone RP23-267D22, complete sequence Length = 200891 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 359 tcagtttccttctttgtata 378 |||||||||||||||||||| Sbjct: 198845 tcagtttccttctttgtata 198864
>gb|AF259073.1| Mus musculus T-cell receptor alpha locus BAC clone MBAC15 from 14D1-D2, complete sequence Length = 31638 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 92 acatgttgttcaacagagaa 111 |||||||||||||||||||| Sbjct: 9175 acatgttgttcaacagagaa 9194
>gb|DP000012.1| Macropus eugenii target 1 genomic scaffold Length = 1996640 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 164 tattttccttttgtctttct 183 |||||||||||||||||||| Sbjct: 1851099 tattttccttttgtctttct 1851080
>gb|AC183546.3| Pan troglodytes BAC clone CH251-245P24 from chromosome 2, complete sequence Length = 202850 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 76 accataaaagtaaatcacat 95 |||||||||||||||||||| Sbjct: 135657 accataaaagtaaatcacat 135676
>gb|BC043952.1| Xenopus laevis similar to chromosome 20 open reading frame 6 (human), mRNA (cDNA clone IMAGE:5570650), partial cds Length = 1703 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 165 attttccttttgtctttctt 184 |||||||||||||||||||| Sbjct: 1662 attttccttttgtctttctt 1643
>gb|AC126250.4| Mus musculus BAC clone RP23-452K12 from chromosome 14, complete sequence Length = 194924 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 92 acatgttgttcaacagagaa 111 |||||||||||||||||||| Sbjct: 180409 acatgttgttcaacagagaa 180390
>gb|AC122936.3| Mus musculus BAC clone RP23-20H6 from 5, complete sequence Length = 234064 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 359 tcagtttccttctttgtata 378 |||||||||||||||||||| Sbjct: 96200 tcagtttccttctttgtata 96181
>gb|AC122830.4| Mus musculus BAC clone RP23-224I23 from 8, complete sequence Length = 257003 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 149 catctctctaatctctattt 168 |||||||||||||||||||| Sbjct: 213250 catctctctaatctctattt 213269
>gb|AC116323.6| Mus musculus BAC clone RP23-281F3 from 8, complete sequence Length = 182204 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 149 catctctctaatctctattt 168 |||||||||||||||||||| Sbjct: 124415 catctctctaatctctattt 124396
>gb|AC005236.4| Homo sapiens BAC clone RP11-479C13 from 7, complete sequence Length = 87593 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 347 cgatggagcctctcagtttc 366 |||||||||||||||||||| Sbjct: 34205 cgatggagcctctcagtttc 34186
>gb|AC004594.2| Homo sapiens PAC clone RP5-1101C3 from 7, complete sequence Length = 151874 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 79 ataaaagtaaatcacatgtt 98 |||||||||||||||||||| Sbjct: 121581 ataaaagtaaatcacatgtt 121562
>gb|AC130652.27| Medicago truncatula clone mth1-1k12, complete sequence Length = 105218 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 401 ttctttgcaacgttcacata 420 |||||||||||||||||||| Sbjct: 19319 ttctttgcaacgttcacata 19338
>gb|AC108436.5| Mus musculus chromosome 8, clone RP23-230G11, complete sequence Length = 185534 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 359 tcagtttccttctttgtata 378 |||||||||||||||||||| Sbjct: 182094 tcagtttccttctttgtata 182075
>emb|AL953860.3| Human DNA sequence from clone RP5-1107B12 on chromosome X Contains the 5' end of a novel gene (MGC44287), complete sequence Length = 46890 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 162 tctattttccttttgtcttt 181 |||||||||||||||||||| Sbjct: 28163 tctattttccttttgtcttt 28144
>emb|AL035661.16|HS568C11 Human DNA sequence from clone RP4-568C11 on chromosome 20p11.21-11.23 Contains the CST7 gene for cystatin F (leukocystatin)(cystatin 7, leukocystatin, cystatin-like metastasis-associated protein, CMAP), the gene C20ORF3 for chromosome 20 open reading frame 3, the 3' end of the ACAS2L gene for acetyl-Coenzyme A synthetase (AMP forming)-like and a CpG island, complete sequence Length = 103681 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 63 aaatccctgtataaccataaaagt 86 |||||||||||||||||| ||||| Sbjct: 5746 aaatccctgtataaccattaaagt 5769
>emb|AL034402.9|HS30G7 Human DNA sequence from clone RP1-30G7 on chromosome Xp11.3-11.4 Contains a novel gene, an actin, beta (ACTB) pseudogene and a CpG island, complete sequence Length = 123637 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 162 tctattttccttttgtcttt 181 |||||||||||||||||||| Sbjct: 84210 tctattttccttttgtcttt 84229
>gb|AC173999.3| Pan troglodytes BAC clone CH251-530E14 from chromosome 7, complete sequence Length = 166256 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 347 cgatggagcctctcagtttc 366 |||||||||||||||||||| Sbjct: 117527 cgatggagcctctcagtttc 117546
>gb|AC009377.7| Drosophila melanogaster 3L BAC RP98-26P20 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 194308 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 101 tcaacagagaaccaaacaga 120 |||||||||||||||||||| Sbjct: 122565 tcaacagagaaccaaacaga 122584
>dbj|AK127865.1| Homo sapiens cDNA FLJ45968 fis, clone PLACE7016321 Length = 3889 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 69 ctgtataaccataaaagtaa 88 |||||||||||||||||||| Sbjct: 2484 ctgtataaccataaaagtaa 2465
>gb|AC009367.9| Drosophila melanogaster 3L BAC RP98-48B15 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 178239 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 101 tcaacagagaaccaaacaga 120 |||||||||||||||||||| Sbjct: 170960 tcaacagagaaccaaacaga 170979
>gb|CP000282.1| Saccharophagus degradans 2-40, complete genome Length = 5057531 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 119 gataatctatcgccgctaaa 138 |||||||||||||||||||| Sbjct: 3697592 gataatctatcgccgctaaa 3697611
>gb|AC025028.21| Homo sapiens 3 BAC RP11-238M12 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 145969 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 166 ttttccttttgtctttcttc 185 |||||||||||||||||||| Sbjct: 35791 ttttccttttgtctttcttc 35772
>gb|AC090096.5| Homo sapiens chromosome 8, clone RP11-159C14, complete sequence Length = 173158 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 76 accataaaagtaaatcacat 95 |||||||||||||||||||| Sbjct: 107023 accataaaagtaaatcacat 107042
>gb|AC079920.6| Homo sapiens BAC clone RP11-325K1 from 7, complete sequence Length = 130284 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 347 cgatggagcctctcagtttc 366 |||||||||||||||||||| Sbjct: 79691 cgatggagcctctcagtttc 79710
>gb|AE008683.1|AE008683 Mus musculus T-cell receptor alpha/delta locus section 1 of 4 of the complete region Length = 404892 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 92 acatgttgttcaacagagaa 111 |||||||||||||||||||| Sbjct: 365950 acatgttgttcaacagagaa 365969
>gb|AC008569.7| Homo sapiens chromosome 19 clone CTC-548K16, complete sequence Length = 227245 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 151 tctctctaatctctattttc 170 |||||||||||||||||||| Sbjct: 120017 tctctctaatctctattttc 120036
>dbj|AK052063.1| Mus musculus 12 days embryo eyeball cDNA, RIKEN full-length enriched library, clone:D230040N22 product:unclassifiable, full insert sequence Length = 3051 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 158 aatctctattttccttttgtcttt 181 |||||||||||||||||| ||||| Sbjct: 1955 aatctctattttccttttttcttt 1978
>gb|AC024941.30|AC024941 Homo sapiens 12 BAC RP11-900F13 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 172246 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 69 ctgtataaccataaaagtaa 88 |||||||||||||||||||| Sbjct: 125652 ctgtataaccataaaagtaa 125633
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 286 aatgttcttcttgatggcga 305 |||||||||||||||||||| Sbjct: 10843881 aatgttcttcttgatggcga 10843862
>gb|AC074087.4| Homo sapiens BAC clone RP11-26C10 from 4, complete sequence Length = 156083 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 166 ttttccttttgtctttcttc 185 |||||||||||||||||||| Sbjct: 31068 ttttccttttgtctttcttc 31087
>gb|AC108938.3| Homo sapiens BAC clone RP11-701A10 from 2, complete sequence Length = 175222 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 76 accataaaagtaaatcacat 95 |||||||||||||||||||| Sbjct: 92695 accataaaagtaaatcacat 92714
>gb|AC010095.6| Homo sapiens BAC clone RP11-348G16 from 2, complete sequence Length = 179517 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 76 accataaaagtaaatcacat 95 |||||||||||||||||||| Sbjct: 47726 accataaaagtaaatcacat 47707
>gb|AC013271.4| Homo sapiens BAC clone RP11-385J6 from 2, complete sequence Length = 155702 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 76 accataaaagtaaatcacat 95 |||||||||||||||||||| Sbjct: 31166 accataaaagtaaatcacat 31185
>gb|AC007546.6| Homo sapiens 12 BAC RP11-946P6 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 168396 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 356 ctctcagtttccttctttgt 375 |||||||||||||||||||| Sbjct: 99531 ctctcagtttccttctttgt 99550
>dbj|AP005100.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0018O23 Length = 142143 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 286 aatgttcttcttgatggcga 305 |||||||||||||||||||| Sbjct: 54640 aatgttcttcttgatggcga 54621
>dbj|AP005766.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0028O21 Length = 134543 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 286 aatgttcttcttgatggcga 305 |||||||||||||||||||| Sbjct: 20256 aatgttcttcttgatggcga 20237
>dbj|BS000052.1| Pan troglodytes chromosome 22 clone:RP43-049N07, map 22, complete sequences Length = 180152 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 156 ctaatctctattttcctttt 175 |||||||||||||||||||| Sbjct: 106801 ctaatctctattttcctttt 106782
>emb|AL671865.11| Mouse DNA sequence from clone RP23-312B13 on chromosome X, complete sequence Length = 226471 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 167 tttccttttgtctttcttcgcttc 190 ||||||||||||||||||| |||| Sbjct: 155009 tttccttttgtctttcttcccttc 155032
>emb|AJ277755.1|LPN277755 Legionella pneumophila serogroup 1, 30 kb instable genetic element Length = 29223 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 28 tttgttcttgagtaaactct 47 |||||||||||||||||||| Sbjct: 25134 tttgttcttgagtaaactct 25153
>gb|AC145183.3| Macropus eugenii clone ME_KBa-60J17, complete sequence Length = 168360 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 164 tattttccttttgtctttct 183 |||||||||||||||||||| Sbjct: 136830 tattttccttttgtctttct 136811
>emb|AL442163.5|CNS07ECT Human chromosome 14 DNA sequence BAC R-90P16 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 167642 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 162 tctattttccttttgtcttt 181 |||||||||||||||||||| Sbjct: 19346 tctattttccttttgtcttt 19327
>emb|AL162191.6|CNS01RHQ Human chromosome 14 DNA sequence BAC R-349D8 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 204662 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 176 gtctttcttcgcttctctct 195 |||||||||||||||||||| Sbjct: 118488 gtctttcttcgcttctctct 118469
>emb|AL133444.4|CNS01DV0 Human chromosome 14 DNA sequence BAC R-724F15 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 192387 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 546 ccacaagcccagcctctgaagtaa 569 |||||||||||||||||| ||||| Sbjct: 63594 ccacaagcccagcctctgcagtaa 63617
>gb|AE003517.3| Drosophila melanogaster chromosome 3L, section 68 of 83 of the complete sequence Length = 257692 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 101 tcaacagagaaccaaacaga 120 |||||||||||||||||||| Sbjct: 181694 tcaacagagaaccaaacaga 181713
>dbj|AP001676.1| Homo sapiens genomic DNA, chromosome 21q, section 20/105 Length = 340000 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 156 ctaatctctattttcctttt 175 |||||||||||||||||||| Sbjct: 163745 ctaatctctattttcctttt 163726
>dbj|AP006248.1| Homo sapiens genomic DNA, chromosome 8, clone:RP11-349F21, complete sequence Length = 186218 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 158 aatctctattttccttttgtcttt 181 |||||||||||| ||||||||||| Sbjct: 92713 aatctctattttgcttttgtcttt 92736
>gb|AC164652.3| Ornithorhynchus anatinus BAC clone OABb-566A1 from chromosome unknown, complete sequence Length = 145427 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 145 ctgccatctctctaatctct 164 |||||||||||||||||||| Sbjct: 132985 ctgccatctctctaatctct 133004
>gb|AC125102.4| Mus musculus BAC clone RP24-208N22 from 6, complete sequence Length = 163235 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 158 aatctctattttccttttgtcttt 181 |||||||||||||||||| ||||| Sbjct: 107877 aatctctattttccttttttcttt 107854
>gb|AC134838.4| Mus musculus BAC clone RP24-350C10 from 8, complete sequence Length = 177716 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 157 taatctctattttccttttgtctt 180 |||||| ||||||||||||||||| Sbjct: 54513 taatctttattttccttttgtctt 54536
>emb|AL954857.10| Zebrafish DNA sequence from clone DKEY-216D12 in linkage group 23, complete sequence Length = 65564 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 173 tttgtctttcttcgcttctctctt 196 ||||||||||||| |||||||||| Sbjct: 28480 tttgtctttcttctcttctctctt 28457
>gb|AC161507.2| Mus musculus chromosome 5, clone RP23-76L18, complete sequence Length = 262831 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 359 tcagtttccttctttgtata 378 |||||||||||||||||||| Sbjct: 26532 tcagtttccttctttgtata 26551
>emb|AL844882.9| Mouse DNA sequence from clone RP23-360H15 on chromosome 2, complete sequence Length = 167978 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 263 cattaagaggagaaagctga 282 |||||||||||||||||||| Sbjct: 114715 cattaagaggagaaagctga 114734
>emb|AL450442.2|CNS07EEY Human chromosome 14 DNA sequence BAC R-214N1 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 145035 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 162 tctattttccttttgtcttt 181 |||||||||||||||||||| Sbjct: 141287 tctattttccttttgtcttt 141268
>emb|AL137065.10| Human DNA sequence from clone RP11-4P13 on chromosome Xq22.1-23, complete sequence Length = 119311 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 162 tctattttccttttgtcttt 181 |||||||||||||||||||| Sbjct: 102482 tctattttccttttgtcttt 102463
>emb|AL669921.13| Mouse DNA sequence from clone RP23-67P9 on chromosome 2, complete sequence Length = 203592 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 505 agcggcactgtggaaatcct 524 |||||||||||||||||||| Sbjct: 83420 agcggcactgtggaaatcct 83401
>dbj|AP000403.1| Homo sapiens genomic DNA, chromosome 21q21.2, LL56-APP region, clone:B330A3, complete sequence Length = 160920 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 156 ctaatctctattttcctttt 175 |||||||||||||||||||| Sbjct: 5144 ctaatctctattttcctttt 5125
>dbj|AB020863.1| Homo sapiens genomic DNA of 8p21.3-p22 anti-oncogene of hepatocellular colorectal and non-small cell lung cancer , segment 6/11 Length = 156909 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 158 aatctctattttccttttgtcttt 181 |||||||||||| ||||||||||| Sbjct: 40282 aatctctattttgcttttgtcttt 40305 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,095,710 Number of Sequences: 3902068 Number of extensions: 6095710 Number of successful extensions: 131308 Number of sequences better than 10.0: 81 Number of HSP's better than 10.0 without gapping: 81 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 130959 Number of HSP's gapped (non-prelim): 340 length of query: 582 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 559 effective length of database: 17,143,297,704 effective search space: 9583103416536 effective search space used: 9583103416536 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)