ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbah61l16 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_549890.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1959 Score = 289 bits (146), Expect = 6e-75 Identities = 309/362 (85%), Gaps = 1/362 (0%) Strand = Plus / Minus Query: 350 gacattttaggccttcttttgcaatcaatttgcaaacaccacattgcgagcttcatcatc 409 ||||||| |||||| ||||||||||| || ||||||||||||||||| | ||||||||| Sbjct: 1811 gacatttgaggcctccttttgcaatcgatctgcaaacaccacattgcaaatttcatcatc 1752 Query: 410 tcaattacatcctgcttgtgtgctagcatgtcattactgttcttgtcaatcaaatctacc 469 || ||||| || |||| |||| || ||||||||||| | | |||||||||||||||||| Sbjct: 1751 tctattacttcttgctcgtgtacttgcatgtcattattatctttgtcaatcaaatctacc 1692 Query: 470 aagtgagcattcttcaccttttcttccaacagggtgataagatggatgctctcttctgat 529 || ||| || ||||||||||||||| ||| | ||| || ||||||||||||| ||| || Sbjct: 1691 aactgatcactcttcaccttttcttgcaataaggtaattagatggatgctctgttcagac 1632 Query: 530 agagaagtgtcgaggttctttcttccgcagatgacttccatgaccacaacaccaaagcta 589 | |||||||| | ||||||||||||| ||||| ||||||||| || | ||||||||| Sbjct: 1631 cgggaagtgtcaacattctttcttccgctgatgatttccatgactactatgccaaagcta 1572 Query: 590 tagacatcggccttttctgtgatttgtgatgttaaccattcaggagctaaatatccaggc 649 |||||||| |||||||||||||| || ||||| | |||||||||||||||||||||||| Sbjct: 1571 tagacatctgccttttctgtgatctgcgatgtcagccattcaggagctaaatatccaggt 1512 Query: 650 gtgcctcgcatttttggtaaccacttggctcatatccctgtcaatgagcttgcatagtcc 709 ||||||| |||| || |||| |||||||||| |||| | |||||||||||||||||||| Sbjct: 1511 gtgcctctcattctt-gtaatcacttggctcttatctcgatcaatgagcttgcatagtcc 1453 Query: 710 aa 711 || Sbjct: 1452 aa 1451
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 289 bits (146), Expect = 6e-75 Identities = 309/362 (85%), Gaps = 1/362 (0%) Strand = Plus / Minus Query: 350 gacattttaggccttcttttgcaatcaatttgcaaacaccacattgcgagcttcatcatc 409 ||||||| |||||| ||||||||||| || ||||||||||||||||| | ||||||||| Sbjct: 729778 gacatttgaggcctccttttgcaatcgatctgcaaacaccacattgcaaatttcatcatc 729719 Query: 410 tcaattacatcctgcttgtgtgctagcatgtcattactgttcttgtcaatcaaatctacc 469 || ||||| || |||| |||| || ||||||||||| | | |||||||||||||||||| Sbjct: 729718 tctattacttcttgctcgtgtacttgcatgtcattattatctttgtcaatcaaatctacc 729659 Query: 470 aagtgagcattcttcaccttttcttccaacagggtgataagatggatgctctcttctgat 529 || ||| || ||||||||||||||| ||| | ||| || ||||||||||||| ||| || Sbjct: 729658 aactgatcactcttcaccttttcttgcaataaggtaattagatggatgctctgttcagac 729599 Query: 530 agagaagtgtcgaggttctttcttccgcagatgacttccatgaccacaacaccaaagcta 589 | |||||||| | ||||||||||||| ||||| ||||||||| || | ||||||||| Sbjct: 729598 cgggaagtgtcaacattctttcttccgctgatgatttccatgactactatgccaaagcta 729539 Query: 590 tagacatcggccttttctgtgatttgtgatgttaaccattcaggagctaaatatccaggc 649 |||||||| |||||||||||||| || ||||| | |||||||||||||||||||||||| Sbjct: 729538 tagacatctgccttttctgtgatctgcgatgtcagccattcaggagctaaatatccaggt 729479 Query: 650 gtgcctcgcatttttggtaaccacttggctcatatccctgtcaatgagcttgcatagtcc 709 ||||||| |||| || |||| |||||||||| |||| | |||||||||||||||||||| Sbjct: 729478 gtgcctctcattctt-gtaatcacttggctcttatctcgatcaatgagcttgcatagtcc 729420 Query: 710 aa 711 || Sbjct: 729419 aa 729418 Score = 244 bits (123), Expect = 3e-61 Identities = 325/391 (83%), Gaps = 1/391 (0%) Strand = Plus / Minus Query: 321 tggtaccttccaagaccttaactacgtcggacattttaggccttcttttgcaatcaattt 380 |||| |||||||| || || || || || ||||||| ||||||||||||||||||||| | Sbjct: 739779 tggtgccttccaaaactttgacaacctcagacatttgaggccttcttttgcaatcaatct 739720 Query: 381 gcaaacaccacattgcgagcttcatcatctcaattacatcctgcttgtgtgctagcatgt 440 ||||||||||||||||||| |||||||||||||||| || ||| |||| || |||| | Sbjct: 739719 gcaaacaccacattgcgagtttcatcatctcaattatttcttgccggtgtacttgcatat 739660 Query: 441 cattactgttcttgtcaatcaaatctaccaagtgagcattcttcaccttttcttccaaca 500 |||| |||| |||||||||||||||| |||| ||| || |||||||||||||| || | Sbjct: 739659 cattgctgtgcttgtcaatcaaatctgccaactgatcacccttcaccttttcttgcagta 739600 Query: 501 gggtgataagatggatgctctcttctgatagagaagtgtcgaggttctttcttccgcaga 560 ||| || |||||||| |||| ||| || |||||||| ||||||||||| || | || Sbjct: 739599 aggtaattagatggatactctgttcagacctggaagtgtcaaggttctttctcccactga 739540 Query: 561 tgacttccatgaccacaacaccaaagctatagacatcggccttttctgtgatttgtgatg 620 | | ||||||||| || | ||||||||||||||||| |||||||||||||| || |||| Sbjct: 739539 tcatttccatgactactatgccaaagctatagacatctgccttttctgtgatctgcgatg 739480 Query: 621 ttaaccattcaggagctaaatatccaggcgtgcctcgcatttttggtaaccacttggctc 680 | | |||||| ||||||||||||||||| ||||||| || || |||||| |||||| ||| Sbjct: 739479 tcagccattctggagctaaatatccaggtgtgcctctca-ttctggtaatcacttgactc 739421 Query: 681 atatccctgtcaatgagcttgcatagtccaa 711 |||| | ||||| ||||||||||| |||| Sbjct: 739420 ttatctcgatcaataagcttgcatagaccaa 739390 Score = 99.6 bits (50), Expect = 1e-17 Identities = 80/90 (88%) Strand = Plus / Minus Query: 544 gttctttcttccgcagatgacttccatgaccacaacaccaaagctatagacatcggcctt 603 |||||||||||| | ||||| ||||||||||||||||||||||||||| ||||| |||| Sbjct: 5732975 gttctttcttccactgatgatttccatgaccacaacaccaaagctatatacatcaacctt 5732916 Query: 604 ttctgtgatttgtgatgttaaccattcagg 633 |||||||||||||| || | ||||||||| Sbjct: 5732915 ctctgtgatttgtgaagtcagccattcagg 5732886 Score = 60.0 bits (30), Expect = 1e-05 Identities = 57/66 (86%) Strand = Plus / Minus Query: 358 aggccttcttttgcaatcaatttgcaaacaccacattgcgagcttcatcatctcaattac 417 ||||||||| ||||||||| | ||||| ||||||||||| |||||||| |||| || || Sbjct: 5728660 aggccttctgttgcaatcactctgcaagcaccacattgcaagcttcattatctttatcac 5728601 Query: 418 atcctg 423 |||||| Sbjct: 5728600 atcctg 5728595 Score = 56.0 bits (28), Expect = 2e-04 Identities = 73/88 (82%) Strand = Plus / Minus Query: 574 cacaacaccaaagctatagacatcggccttttctgtgatttgtgatgttaaccattcagg 633 |||||| ||| | ||||||||||| |||| || ||||| || ||||||||||||||||| Sbjct: 5728444 cacaactccataactatagacatcaaccttctcggtgatatgagatgttaaccattcagg 5728385 Query: 634 agctaaatatccaggcgtgcctcgcatt 661 | ||||||||||| || |||| |||| Sbjct: 5728384 ggacaaatatccaggtgttcctctcatt 5728357 Score = 54.0 bits (27), Expect = 6e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 380 tgcaaacaccacattgcgagcttcatcatctcaattacatcctgcttgtgt 430 |||||||||||||| || |||||||||| |||||| || |||| ||||||| Sbjct: 5733139 tgcaaacaccacatggcaagcttcatcacctcaatcacttcctccttgtgt 5733089 Score = 50.1 bits (25), Expect = 0.010 Identities = 25/25 (100%) Strand = Plus / Minus Query: 575 acaacaccaaagctatagacatcgg 599 ||||||||||||||||||||||||| Sbjct: 41090784 acaacaccaaagctatagacatcgg 41090760 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Minus Query: 578 acaccaaagctatagacatcgg 599 |||||||||||||||||||||| Sbjct: 33224563 acaccaaagctatagacatcgg 33224542 Score = 44.1 bits (22), Expect = 0.62 Identities = 25/26 (96%) Strand = Plus / Plus Query: 578 acaccaaagctatagacatcggcctt 603 |||||||||||||||||||| ||||| Sbjct: 6781259 acaccaaagctatagacatctgcctt 6781284 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 574 cacaacaccaaagctatagacatc 597 |||||||||||||||||| ||||| Sbjct: 1957524 cacaacaccaaagctatacacatc 1957547
>dbj|AP003338.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1212_B09 Length = 130728 Score = 289 bits (146), Expect = 6e-75 Identities = 309/362 (85%), Gaps = 1/362 (0%) Strand = Plus / Minus Query: 350 gacattttaggccttcttttgcaatcaatttgcaaacaccacattgcgagcttcatcatc 409 ||||||| |||||| ||||||||||| || ||||||||||||||||| | ||||||||| Sbjct: 6978 gacatttgaggcctccttttgcaatcgatctgcaaacaccacattgcaaatttcatcatc 6919 Query: 410 tcaattacatcctgcttgtgtgctagcatgtcattactgttcttgtcaatcaaatctacc 469 || ||||| || |||| |||| || ||||||||||| | | |||||||||||||||||| Sbjct: 6918 tctattacttcttgctcgtgtacttgcatgtcattattatctttgtcaatcaaatctacc 6859 Query: 470 aagtgagcattcttcaccttttcttccaacagggtgataagatggatgctctcttctgat 529 || ||| || ||||||||||||||| ||| | ||| || ||||||||||||| ||| || Sbjct: 6858 aactgatcactcttcaccttttcttgcaataaggtaattagatggatgctctgttcagac 6799 Query: 530 agagaagtgtcgaggttctttcttccgcagatgacttccatgaccacaacaccaaagcta 589 | |||||||| | ||||||||||||| ||||| ||||||||| || | ||||||||| Sbjct: 6798 cgggaagtgtcaacattctttcttccgctgatgatttccatgactactatgccaaagcta 6739 Query: 590 tagacatcggccttttctgtgatttgtgatgttaaccattcaggagctaaatatccaggc 649 |||||||| |||||||||||||| || ||||| | |||||||||||||||||||||||| Sbjct: 6738 tagacatctgccttttctgtgatctgcgatgtcagccattcaggagctaaatatccaggt 6679 Query: 650 gtgcctcgcatttttggtaaccacttggctcatatccctgtcaatgagcttgcatagtcc 709 ||||||| |||| || |||| |||||||||| |||| | |||||||||||||||||||| Sbjct: 6678 gtgcctctcattctt-gtaatcacttggctcttatctcgatcaatgagcttgcatagtcc 6620 Query: 710 aa 711 || Sbjct: 6619 aa 6618 Score = 244 bits (123), Expect = 3e-61 Identities = 325/391 (83%), Gaps = 1/391 (0%) Strand = Plus / Minus Query: 321 tggtaccttccaagaccttaactacgtcggacattttaggccttcttttgcaatcaattt 380 |||| |||||||| || || || || || ||||||| ||||||||||||||||||||| | Sbjct: 16979 tggtgccttccaaaactttgacaacctcagacatttgaggccttcttttgcaatcaatct 16920 Query: 381 gcaaacaccacattgcgagcttcatcatctcaattacatcctgcttgtgtgctagcatgt 440 ||||||||||||||||||| |||||||||||||||| || ||| |||| || |||| | Sbjct: 16919 gcaaacaccacattgcgagtttcatcatctcaattatttcttgccggtgtacttgcatat 16860 Query: 441 cattactgttcttgtcaatcaaatctaccaagtgagcattcttcaccttttcttccaaca 500 |||| |||| |||||||||||||||| |||| ||| || |||||||||||||| || | Sbjct: 16859 cattgctgtgcttgtcaatcaaatctgccaactgatcacccttcaccttttcttgcagta 16800 Query: 501 gggtgataagatggatgctctcttctgatagagaagtgtcgaggttctttcttccgcaga 560 ||| || |||||||| |||| ||| || |||||||| ||||||||||| || | || Sbjct: 16799 aggtaattagatggatactctgttcagacctggaagtgtcaaggttctttctcccactga 16740 Query: 561 tgacttccatgaccacaacaccaaagctatagacatcggccttttctgtgatttgtgatg 620 | | ||||||||| || | ||||||||||||||||| |||||||||||||| || |||| Sbjct: 16739 tcatttccatgactactatgccaaagctatagacatctgccttttctgtgatctgcgatg 16680 Query: 621 ttaaccattcaggagctaaatatccaggcgtgcctcgcatttttggtaaccacttggctc 680 | | |||||| ||||||||||||||||| ||||||| || || |||||| |||||| ||| Sbjct: 16679 tcagccattctggagctaaatatccaggtgtgcctctca-ttctggtaatcacttgactc 16621 Query: 681 atatccctgtcaatgagcttgcatagtccaa 711 |||| | ||||| ||||||||||| |||| Sbjct: 16620 ttatctcgatcaataagcttgcatagaccaa 16590
>dbj|AP003219.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBb0032H19 Length = 126434 Score = 289 bits (146), Expect = 6e-75 Identities = 309/362 (85%), Gaps = 1/362 (0%) Strand = Plus / Minus Query: 350 gacattttaggccttcttttgcaatcaatttgcaaacaccacattgcgagcttcatcatc 409 ||||||| |||||| ||||||||||| || ||||||||||||||||| | ||||||||| Sbjct: 113522 gacatttgaggcctccttttgcaatcgatctgcaaacaccacattgcaaatttcatcatc 113463 Query: 410 tcaattacatcctgcttgtgtgctagcatgtcattactgttcttgtcaatcaaatctacc 469 || ||||| || |||| |||| || ||||||||||| | | |||||||||||||||||| Sbjct: 113462 tctattacttcttgctcgtgtacttgcatgtcattattatctttgtcaatcaaatctacc 113403 Query: 470 aagtgagcattcttcaccttttcttccaacagggtgataagatggatgctctcttctgat 529 || ||| || ||||||||||||||| ||| | ||| || ||||||||||||| ||| || Sbjct: 113402 aactgatcactcttcaccttttcttgcaataaggtaattagatggatgctctgttcagac 113343 Query: 530 agagaagtgtcgaggttctttcttccgcagatgacttccatgaccacaacaccaaagcta 589 | |||||||| | ||||||||||||| ||||| ||||||||| || | ||||||||| Sbjct: 113342 cgggaagtgtcaacattctttcttccgctgatgatttccatgactactatgccaaagcta 113283 Query: 590 tagacatcggccttttctgtgatttgtgatgttaaccattcaggagctaaatatccaggc 649 |||||||| |||||||||||||| || ||||| | |||||||||||||||||||||||| Sbjct: 113282 tagacatctgccttttctgtgatctgcgatgtcagccattcaggagctaaatatccaggt 113223 Query: 650 gtgcctcgcatttttggtaaccacttggctcatatccctgtcaatgagcttgcatagtcc 709 ||||||| |||| || |||| |||||||||| |||| | |||||||||||||||||||| Sbjct: 113222 gtgcctctcattctt-gtaatcacttggctcttatctcgatcaatgagcttgcatagtcc 113164 Query: 710 aa 711 || Sbjct: 113163 aa 113162 Score = 244 bits (123), Expect = 3e-61 Identities = 325/391 (83%), Gaps = 1/391 (0%) Strand = Plus / Minus Query: 321 tggtaccttccaagaccttaactacgtcggacattttaggccttcttttgcaatcaattt 380 |||| |||||||| || || || || || ||||||| ||||||||||||||||||||| | Sbjct: 123523 tggtgccttccaaaactttgacaacctcagacatttgaggccttcttttgcaatcaatct 123464 Query: 381 gcaaacaccacattgcgagcttcatcatctcaattacatcctgcttgtgtgctagcatgt 440 ||||||||||||||||||| |||||||||||||||| || ||| |||| || |||| | Sbjct: 123463 gcaaacaccacattgcgagtttcatcatctcaattatttcttgccggtgtacttgcatat 123404 Query: 441 cattactgttcttgtcaatcaaatctaccaagtgagcattcttcaccttttcttccaaca 500 |||| |||| |||||||||||||||| |||| ||| || |||||||||||||| || | Sbjct: 123403 cattgctgtgcttgtcaatcaaatctgccaactgatcacccttcaccttttcttgcagta 123344 Query: 501 gggtgataagatggatgctctcttctgatagagaagtgtcgaggttctttcttccgcaga 560 ||| || |||||||| |||| ||| || |||||||| ||||||||||| || | || Sbjct: 123343 aggtaattagatggatactctgttcagacctggaagtgtcaaggttctttctcccactga 123284 Query: 561 tgacttccatgaccacaacaccaaagctatagacatcggccttttctgtgatttgtgatg 620 | | ||||||||| || | ||||||||||||||||| |||||||||||||| || |||| Sbjct: 123283 tcatttccatgactactatgccaaagctatagacatctgccttttctgtgatctgcgatg 123224 Query: 621 ttaaccattcaggagctaaatatccaggcgtgcctcgcatttttggtaaccacttggctc 680 | | |||||| ||||||||||||||||| ||||||| || || |||||| |||||| ||| Sbjct: 123223 tcagccattctggagctaaatatccaggtgtgcctctca-ttctggtaatcacttgactc 123165 Query: 681 atatccctgtcaatgagcttgcatagtccaa 711 |||| | ||||| ||||||||||| |||| Sbjct: 123164 ttatctcgatcaataagcttgcatagaccaa 123134
>ref|XM_549893.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1806 Score = 244 bits (123), Expect = 3e-61 Identities = 325/391 (83%), Gaps = 1/391 (0%) Strand = Plus / Minus Query: 321 tggtaccttccaagaccttaactacgtcggacattttaggccttcttttgcaatcaattt 380 |||| |||||||| || || || || || ||||||| ||||||||||||||||||||| | Sbjct: 1687 tggtgccttccaaaactttgacaacctcagacatttgaggccttcttttgcaatcaatct 1628 Query: 381 gcaaacaccacattgcgagcttcatcatctcaattacatcctgcttgtgtgctagcatgt 440 ||||||||||||||||||| |||||||||||||||| || ||| |||| || |||| | Sbjct: 1627 gcaaacaccacattgcgagtttcatcatctcaattatttcttgccggtgtacttgcatat 1568 Query: 441 cattactgttcttgtcaatcaaatctaccaagtgagcattcttcaccttttcttccaaca 500 |||| |||| |||||||||||||||| |||| ||| || |||||||||||||| || | Sbjct: 1567 cattgctgtgcttgtcaatcaaatctgccaactgatcacccttcaccttttcttgcagta 1508 Query: 501 gggtgataagatggatgctctcttctgatagagaagtgtcgaggttctttcttccgcaga 560 ||| || |||||||| |||| ||| || |||||||| ||||||||||| || | || Sbjct: 1507 aggtaattagatggatactctgttcagacctggaagtgtcaaggttctttctcccactga 1448 Query: 561 tgacttccatgaccacaacaccaaagctatagacatcggccttttctgtgatttgtgatg 620 | | ||||||||| || | ||||||||||||||||| |||||||||||||| || |||| Sbjct: 1447 tcatttccatgactactatgccaaagctatagacatctgccttttctgtgatctgcgatg 1388 Query: 621 ttaaccattcaggagctaaatatccaggcgtgcctcgcatttttggtaaccacttggctc 680 | | |||||| ||||||||||||||||| ||||||| || || |||||| |||||| ||| Sbjct: 1387 tcagccattctggagctaaatatccaggtgtgcctctca-ttctggtaatcacttgactc 1329 Query: 681 atatccctgtcaatgagcttgcatagtccaa 711 |||| | ||||| ||||||||||| |||| Sbjct: 1328 ttatctcgatcaataagcttgcatagaccaa 1298
>gb|AY108371.1| Zea mays PCO102047 mRNA sequence Length = 738 Score = 145 bits (73), Expect = 2e-31 Identities = 212/257 (82%), Gaps = 1/257 (0%) Strand = Plus / Plus Query: 455 tcaatcaaatctaccaagtgagcattcttcaccttttcttccaacagggtgataagatgg 514 |||||||||||||||||| || || || ||| ||| || || | || ||| ||||| || Sbjct: 460 tcaatcaaatctaccaagcgatcactcctcaacttctcctctagcaaggtaataaggtga 519 Query: 515 atgctctcttctgatagagaagtgtcgaggttctttcttccgcagatgacttccatgacc 574 | ||||| ||| || |||||||||| |||||||| ||||| | ||||| ||||| || Sbjct: 520 aagctcttttcagaccgagaagtgtccaggttcttccttccactgatgatctccatcaca 579 Query: 575 acaacaccaaagctatagacatcggccttttctgtgatttgtgatgttaaccattcagga 634 || || ||||||||||| ||||| |||||||| ||||| || || || |||||||| ||| Sbjct: 580 accacgccaaagctatatacatcagccttttcagtgatgtgcgacgtcaaccattctgga 639 Query: 635 gctaaatatccaggcgtgcctcgcatttttggtaaccacttggctcatatccctgtcaat 694 |||| ||||||||||||||||| || || | ||||||||||||||| |||||| ||| || Sbjct: 640 gctagatatccaggcgtgcctctca-ttctagtaaccacttggctcttatcccggtcgat 698 Query: 695 gagcttgcatagtccaa 711 ||||||||| ||||||| Sbjct: 699 gagcttgcagagtccaa 715 Score = 115 bits (58), Expect = 2e-22 Identities = 82/90 (91%) Strand = Plus / Plus Query: 326 ccttccaagaccttaactacgtcggacattttaggccttcttttgcaatcaatttgcaaa 385 ||||||||||| || || || ||||||||||| ||||||| |||||||||||| |||||| Sbjct: 328 ccttccaagacttttacgacctcggacattttgggccttcgtttgcaatcaatctgcaaa 387 Query: 386 caccacattgcgagcttcatcatctcaatt 415 ||||||||||||||||||||||||| |||| Sbjct: 388 caccacattgcgagcttcatcatctgaatt 417 Score = 50.1 bits (25), Expect = 0.010 Identities = 40/45 (88%) Strand = Plus / Plus Query: 196 atttcacctggggcctgatacatgtgaagctagaggtggaactga 240 ||||||||| |||||||| || | |||||||||||||||| |||| Sbjct: 198 atttcaccttgggcctgacacttctgaagctagaggtggagctga 242
>dbj|AK106707.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-114-E12, full insert sequence Length = 2110 Score = 125 bits (63), Expect = 2e-25 Identities = 151/179 (84%), Gaps = 1/179 (0%) Strand = Plus / Plus Query: 533 gaagtgtcgaggttctttcttccgcagatgacttccatgaccacaacaccaaagctatag 592 |||||||| ||||||||||| || | ||| | ||||||||| || | |||||||||||| Sbjct: 292 gaagtgtcaaggttctttctcccactgatcatttccatgactactatgccaaagctatag 351 Query: 593 acatcggccttttctgtgatttgtgatgttaaccattcaggagctaaatatccaggcgtg 652 ||||| |||||||||||||| || ||||| | |||||| ||||||||||||||||| ||| Sbjct: 352 acatctgccttttctgtgatctgcgatgtcagccattctggagctaaatatccaggtgtg 411 Query: 653 cctcgcatttttggtaaccacttggctcatatccctgtcaatgagcttgcatagtccaa 711 |||| || || |||||| |||||| ||| |||| | ||||| ||||||||||| |||| Sbjct: 412 cctctca-ttctggtaatcacttgactcttatctcgatcaataagcttgcatagaccaa 469
>dbj|AK110685.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-169-H09, full insert sequence Length = 664 Score = 113 bits (57), Expect = 8e-22 Identities = 111/129 (86%) Strand = Plus / Plus Query: 533 gaagtgtcgaggttctttcttccgcagatgacttccatgaccacaacaccaaagctatag 592 |||||||| ||||||||||| || | ||| | ||||||||| || | |||||||||||| Sbjct: 327 gaagtgtcaaggttctttctcccactgatcatttccatgactactatgccaaagctatag 386 Query: 593 acatcggccttttctgtgatttgtgatgttaaccattcaggagctaaatatccaggcgtg 652 ||||| |||||||||||||| || ||||| | |||||| ||||||||||||||||| ||| Sbjct: 387 acatctgccttttctgtgatctgcgatgtcagccattctggagctaaatatccaggtgtg 446 Query: 653 cctcgcatt 661 |||| |||| Sbjct: 447 cctctcatt 455
>ref|NM_188330.1| Oryza sativa (japonica cultivar-group), Ozsa8081 predicted mRNA Length = 2538 Score = 99.6 bits (50), Expect = 1e-17 Identities = 80/90 (88%) Strand = Plus / Minus Query: 544 gttctttcttccgcagatgacttccatgaccacaacaccaaagctatagacatcggcctt 603 |||||||||||| | ||||| ||||||||||||||||||||||||||| ||||| |||| Sbjct: 2193 gttctttcttccactgatgatttccatgaccacaacaccaaagctatatacatcaacctt 2134 Query: 604 ttctgtgatttgtgatgttaaccattcagg 633 |||||||||||||| || | ||||||||| Sbjct: 2133 ctctgtgatttgtgaagtcagccattcagg 2104 Score = 54.0 bits (27), Expect = 6e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 380 tgcaaacaccacattgcgagcttcatcatctcaattacatcctgcttgtgt 430 |||||||||||||| || |||||||||| |||||| || |||| ||||||| Sbjct: 2357 tgcaaacaccacatggcaagcttcatcacctcaatcacttcctccttgtgt 2307
>dbj|AP001551.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0451C06 Length = 151773 Score = 99.6 bits (50), Expect = 1e-17 Identities = 80/90 (88%) Strand = Plus / Minus Query: 544 gttctttcttccgcagatgacttccatgaccacaacaccaaagctatagacatcggcctt 603 |||||||||||| | ||||| ||||||||||||||||||||||||||| ||||| |||| Sbjct: 57677 gttctttcttccactgatgatttccatgaccacaacaccaaagctatatacatcaacctt 57618 Query: 604 ttctgtgatttgtgatgttaaccattcagg 633 |||||||||||||| || | ||||||||| Sbjct: 57617 ctctgtgatttgtgaagtcagccattcagg 57588 Score = 60.0 bits (30), Expect = 1e-05 Identities = 57/66 (86%) Strand = Plus / Minus Query: 358 aggccttcttttgcaatcaatttgcaaacaccacattgcgagcttcatcatctcaattac 417 ||||||||| ||||||||| | ||||| ||||||||||| |||||||| |||| || || Sbjct: 53362 aggccttctgttgcaatcactctgcaagcaccacattgcaagcttcattatctttatcac 53303 Query: 418 atcctg 423 |||||| Sbjct: 53302 atcctg 53297 Score = 56.0 bits (28), Expect = 2e-04 Identities = 73/88 (82%) Strand = Plus / Minus Query: 574 cacaacaccaaagctatagacatcggccttttctgtgatttgtgatgttaaccattcagg 633 |||||| ||| | ||||||||||| |||| || ||||| || ||||||||||||||||| Sbjct: 53146 cacaactccataactatagacatcaaccttctcggtgatatgagatgttaaccattcagg 53087 Query: 634 agctaaatatccaggcgtgcctcgcatt 661 | ||||||||||| || |||| |||| Sbjct: 53086 ggacaaatatccaggtgttcctctcatt 53059 Score = 54.0 bits (27), Expect = 6e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 380 tgcaaacaccacattgcgagcttcatcatctcaattacatcctgcttgtgt 430 |||||||||||||| || |||||||||| |||||| || |||| ||||||| Sbjct: 57841 tgcaaacaccacatggcaagcttcatcacctcaatcacttcctccttgtgt 57791
>ref|XM_471711.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2517 Score = 75.8 bits (38), Expect = 2e-10 Identities = 71/82 (86%) Strand = Plus / Minus Query: 575 acaacaccaaagctatagacatcggccttttctgtgatttgtgatgttaaccattcagga 634 ||||| |||||||| ||||| || | ||||| ||||| |||||||||| ||||||||| Sbjct: 2138 acaactccaaagctgtagacgtcaactttttcagtgatctgtgatgttagccattcaggt 2079 Query: 635 gctaaatatccaggcgtgcctc 656 || ||||||||||||||||||| Sbjct: 2078 gccaaatatccaggcgtgcctc 2057 Score = 46.1 bits (23), Expect = 0.16 Identities = 26/27 (96%) Strand = Plus / Minus Query: 378 tttgcaaacaccacattgcgagcttca 404 ||||||| ||||||||||||||||||| Sbjct: 2338 tttgcaagcaccacattgcgagcttca 2312
>ref|XM_471703.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2595 Score = 75.8 bits (38), Expect = 2e-10 Identities = 71/82 (86%) Strand = Plus / Minus Query: 575 acaacaccaaagctatagacatcggccttttctgtgatttgtgatgttaaccattcagga 634 ||||| |||||||| || ||||| | ||||| |||||||||||||||||||||||||| Sbjct: 2219 acaacgccaaagctgtacacatcaactttttcagtgatttgtgatgttaaccattcaggt 2160 Query: 635 gctaaatatccaggcgtgcctc 656 || | ||||||||| ||||||| Sbjct: 2159 gccagatatccaggtgtgcctc 2138 Score = 44.1 bits (22), Expect = 0.62 Identities = 67/82 (81%) Strand = Plus / Minus Query: 380 tgcaaacaccacattgcgagcttcatcatctcaattacatcctgcttgtgtgctagcatg 439 ||||| ||||||||||| ||||||||||| | ||| || |||| || || || | |||| Sbjct: 2414 tgcaagcaccacattgcaagcttcatcatttgaatcacttcctcctggtatgagaccatg 2355 Query: 440 tcattactgttcttgtcaatca 461 ||| |||||| ||| ||||||| Sbjct: 2354 tcactactgtgcttatcaatca 2333
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 75.8 bits (38), Expect = 2e-10 Identities = 71/82 (86%) Strand = Plus / Plus Query: 575 acaacaccaaagctatagacatcggccttttctgtgatttgtgatgttaaccattcagga 634 ||||| |||||||| ||||| || | ||||| ||||| |||||||||| ||||||||| Sbjct: 13639195 acaactccaaagctgtagacgtcaactttttcagtgatctgtgatgttagccattcaggt 13639254 Query: 635 gctaaatatccaggcgtgcctc 656 || ||||||||||||||||||| Sbjct: 13639255 gccaaatatccaggcgtgcctc 13639276 Score = 75.8 bits (38), Expect = 2e-10 Identities = 71/82 (86%) Strand = Plus / Plus Query: 575 acaacaccaaagctatagacatcggccttttctgtgatttgtgatgttaaccattcagga 634 ||||| |||||||| || ||||| | ||||| |||||||||||||||||||||||||| Sbjct: 13580772 acaacgccaaagctgtacacatcaactttttcagtgatttgtgatgttaaccattcaggt 13580831 Query: 635 gctaaatatccaggcgtgcctc 656 || | ||||||||| ||||||| Sbjct: 13580832 gccagatatccaggtgtgcctc 13580853 Score = 73.8 bits (37), Expect = 7e-10 Identities = 76/89 (85%) Strand = Plus / Plus Query: 373 atcaatttgcaaacaccacattgcgagcttcatcatctcaattacatcctgcttgtgtgc 432 |||| ||||||| ||||||||||| ||||||||||| | ||| || |||| || ||||| Sbjct: 13564244 atcattttgcaagcaccacattgcaagcttcatcatttgaatcacttcctcctggtgtga 13564303 Query: 433 tagcatgtcattactgttcttgtcaatca 461 | |||||||||||||| ||||||||||| Sbjct: 13564304 gaccatgtcattactgtgcttgtcaatca 13564332 Score = 67.9 bits (34), Expect = 4e-08 Identities = 70/82 (85%) Strand = Plus / Plus Query: 575 acaacaccaaagctatagacatcggccttttctgtgatttgtgatgttaaccattcagga 634 ||||| || ||||| |||||||| | ||||| |||||||||||||||||||||||||| Sbjct: 13574119 acaacgccgaagctgtagacatcaactttttcagtgatttgtgatgttaaccattcaggt 13574178 Query: 635 gctaaatatccaggcgtgcctc 656 || | |||||| || ||||||| Sbjct: 13574179 gccagatatcctggtgtgcctc 13574200 Score = 61.9 bits (31), Expect = 3e-06 Identities = 49/55 (89%) Strand = Plus / Plus Query: 602 ttttctgtgatttgtgatgttaaccattcaggagctaaatatccaggcgtgcctc 656 ||||| |||||||| ||||||||||||||||| || | ||||||||| ||||||| Sbjct: 13564472 ttttcagtgatttgcgatgttaaccattcaggtgccagatatccaggtgtgcctc 13564526 Score = 60.0 bits (30), Expect = 1e-05 Identities = 69/82 (84%) Strand = Plus / Plus Query: 380 tgcaaacaccacattgcgagcttcatcatctcaattacatcctgcttgtgtgctagcatg 439 ||||| ||||||||||| ||||||||||| | ||| || |||| || ||||| | |||| Sbjct: 13605376 tgcaagcaccacattgcaagcttcatcatttgaatcacttcctcctggtgtgacaccatg 13605435 Query: 440 tcattactgttcttgtcaatca 461 |||||||||| ||| ||||||| Sbjct: 13605436 tcattactgtgcttatcaatca 13605457 Score = 56.0 bits (28), Expect = 2e-04 Identities = 76/92 (82%) Strand = Plus / Plus Query: 565 ttccatgaccacaacaccaaagctatagacatcggccttttctgtgatttgtgatgttaa 624 |||||||| ||||| |||||||| || | ||| | ||||| ||||| || |||||||| Sbjct: 13605561 ttccatgagaacaactccaaagctgtatatatcaactttttcagtgatctgcgatgttaa 13605620 Query: 625 ccattcaggagctaaatatccaggcgtgcctc 656 ||||||||| || | ||||||||| ||||||| Sbjct: 13605621 ccattcaggtgccagatatccaggtgtgcctc 13605652 Score = 50.1 bits (25), Expect = 0.010 Identities = 28/29 (96%) Strand = Plus / Plus Query: 380 tgcaaacaccacattgcgagcttcatcat 408 ||||| ||||||||||||||||||||||| Sbjct: 13573924 tgcaagcaccacattgcgagcttcatcat 13573952 Score = 46.1 bits (23), Expect = 0.16 Identities = 26/27 (96%) Strand = Plus / Plus Query: 378 tttgcaaacaccacattgcgagcttca 404 ||||||| ||||||||||||||||||| Sbjct: 13638995 tttgcaagcaccacattgcgagcttca 13639021 Score = 46.1 bits (23), Expect = 0.16 Identities = 26/27 (96%) Strand = Plus / Plus Query: 378 tttgcaaacaccacattgcgagcttca 404 ||||||| ||||||||||||||||||| Sbjct: 13619508 tttgcaagcaccacattgcgagcttca 13619534 Score = 44.1 bits (22), Expect = 0.62 Identities = 67/82 (81%) Strand = Plus / Plus Query: 380 tgcaaacaccacattgcgagcttcatcatctcaattacatcctgcttgtgtgctagcatg 439 ||||| ||||||||||| ||||||||||| | ||| || |||| || || || | |||| Sbjct: 13580577 tgcaagcaccacattgcaagcttcatcatttgaatcacttcctcctggtatgagaccatg 13580636 Query: 440 tcattactgttcttgtcaatca 461 ||| |||||| ||| ||||||| Sbjct: 13580637 tcactactgtgcttatcaatca 13580658 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 574 cacaacaccaaagctatagacatc 597 ||||||||||||||| |||||||| Sbjct: 788693 cacaacaccaaagctgtagacatc 788670
>emb|AL662999.4| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0018A10, complete sequence Length = 133238 Score = 75.8 bits (38), Expect = 2e-10 Identities = 71/82 (86%) Strand = Plus / Plus Query: 575 acaacaccaaagctatagacatcggccttttctgtgatttgtgatgttaaccattcagga 634 ||||| |||||||| || ||||| | ||||| |||||||||||||||||||||||||| Sbjct: 107235 acaacgccaaagctgtacacatcaactttttcagtgatttgtgatgttaaccattcaggt 107294 Query: 635 gctaaatatccaggcgtgcctc 656 || | ||||||||| ||||||| Sbjct: 107295 gccagatatccaggtgtgcctc 107316 Score = 73.8 bits (37), Expect = 7e-10 Identities = 76/89 (85%) Strand = Plus / Plus Query: 373 atcaatttgcaaacaccacattgcgagcttcatcatctcaattacatcctgcttgtgtgc 432 |||| ||||||| ||||||||||| ||||||||||| | ||| || |||| || ||||| Sbjct: 90707 atcattttgcaagcaccacattgcaagcttcatcatttgaatcacttcctcctggtgtga 90766 Query: 433 tagcatgtcattactgttcttgtcaatca 461 | |||||||||||||| ||||||||||| Sbjct: 90767 gaccatgtcattactgtgcttgtcaatca 90795 Score = 67.9 bits (34), Expect = 4e-08 Identities = 70/82 (85%) Strand = Plus / Plus Query: 575 acaacaccaaagctatagacatcggccttttctgtgatttgtgatgttaaccattcagga 634 ||||| || ||||| |||||||| | ||||| |||||||||||||||||||||||||| Sbjct: 100582 acaacgccgaagctgtagacatcaactttttcagtgatttgtgatgttaaccattcaggt 100641 Query: 635 gctaaatatccaggcgtgcctc 656 || | |||||| || ||||||| Sbjct: 100642 gccagatatcctggtgtgcctc 100663 Score = 61.9 bits (31), Expect = 3e-06 Identities = 49/55 (89%) Strand = Plus / Plus Query: 602 ttttctgtgatttgtgatgttaaccattcaggagctaaatatccaggcgtgcctc 656 ||||| |||||||| ||||||||||||||||| || | ||||||||| ||||||| Sbjct: 90935 ttttcagtgatttgcgatgttaaccattcaggtgccagatatccaggtgtgcctc 90989 Score = 60.0 bits (30), Expect = 1e-05 Identities = 69/82 (84%) Strand = Plus / Plus Query: 380 tgcaaacaccacattgcgagcttcatcatctcaattacatcctgcttgtgtgctagcatg 439 ||||| ||||||||||| ||||||||||| | ||| || |||| || ||||| | |||| Sbjct: 131839 tgcaagcaccacattgcaagcttcatcatttgaatcacttcctcctggtgtgacaccatg 131898 Query: 440 tcattactgttcttgtcaatca 461 |||||||||| ||| ||||||| Sbjct: 131899 tcattactgtgcttatcaatca 131920 Score = 56.0 bits (28), Expect = 2e-04 Identities = 76/92 (82%) Strand = Plus / Plus Query: 565 ttccatgaccacaacaccaaagctatagacatcggccttttctgtgatttgtgatgttaa 624 |||||||| ||||| |||||||| || | ||| | ||||| ||||| || |||||||| Sbjct: 132024 ttccatgagaacaactccaaagctgtatatatcaactttttcagtgatctgcgatgttaa 132083 Query: 625 ccattcaggagctaaatatccaggcgtgcctc 656 ||||||||| || | ||||||||| ||||||| Sbjct: 132084 ccattcaggtgccagatatccaggtgtgcctc 132115 Score = 50.1 bits (25), Expect = 0.010 Identities = 28/29 (96%) Strand = Plus / Plus Query: 380 tgcaaacaccacattgcgagcttcatcat 408 ||||| ||||||||||||||||||||||| Sbjct: 100387 tgcaagcaccacattgcgagcttcatcat 100415 Score = 44.1 bits (22), Expect = 0.62 Identities = 67/82 (81%) Strand = Plus / Plus Query: 380 tgcaaacaccacattgcgagcttcatcatctcaattacatcctgcttgtgtgctagcatg 439 ||||| ||||||||||| ||||||||||| | ||| || |||| || || || | |||| Sbjct: 107040 tgcaagcaccacattgcaagcttcatcatttgaatcacttcctcctggtatgagaccatg 107099 Query: 440 tcattactgttcttgtcaatca 461 ||| |||||| ||| ||||||| Sbjct: 107100 tcactactgtgcttatcaatca 107121
>emb|AL731609.2|OSJN00259 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0079M09, complete sequence Length = 187359 Score = 75.8 bits (38), Expect = 2e-10 Identities = 71/82 (86%) Strand = Plus / Plus Query: 575 acaacaccaaagctatagacatcggccttttctgtgatttgtgatgttaaccattcagga 634 ||||| |||||||| ||||| || | ||||| ||||| |||||||||| ||||||||| Sbjct: 33803 acaactccaaagctgtagacgtcaactttttcagtgatctgtgatgttagccattcaggt 33862 Query: 635 gctaaatatccaggcgtgcctc 656 || ||||||||||||||||||| Sbjct: 33863 gccaaatatccaggcgtgcctc 33884 Score = 56.0 bits (28), Expect = 2e-04 Identities = 76/92 (82%) Strand = Plus / Plus Query: 565 ttccatgaccacaacaccaaagctatagacatcggccttttctgtgatttgtgatgttaa 624 |||||||| ||||| |||||||| || | ||| | ||||| ||||| || |||||||| Sbjct: 169 ttccatgagaacaactccaaagctgtatatatcaactttttcagtgatctgcgatgttaa 228 Query: 625 ccattcaggagctaaatatccaggcgtgcctc 656 ||||||||| || | ||||||||| ||||||| Sbjct: 229 ccattcaggtgccagatatccaggtgtgcctc 260 Score = 46.1 bits (23), Expect = 0.16 Identities = 26/27 (96%) Strand = Plus / Plus Query: 378 tttgcaaacaccacattgcgagcttca 404 ||||||| ||||||||||||||||||| Sbjct: 33603 tttgcaagcaccacattgcgagcttca 33629 Score = 46.1 bits (23), Expect = 0.16 Identities = 26/27 (96%) Strand = Plus / Plus Query: 378 tttgcaaacaccacattgcgagcttca 404 ||||||| ||||||||||||||||||| Sbjct: 14116 tttgcaagcaccacattgcgagcttca 14142 Score = 40.1 bits (20), Expect = 9.7 Identities = 53/64 (82%) Strand = Plus / Plus Query: 398 agcttcatcatctcaattacatcctgcttgtgtgctagcatgtcattactgttcttgtca 457 ||||||||||| | ||| || |||| || ||||| | |||||||||||||| ||| ||| Sbjct: 2 agcttcatcatttgaatcacttcctcctggtgtgacaccatgtcattactgtgcttatca 61 Query: 458 atca 461 |||| Sbjct: 62 atca 65
>ref|XM_471701.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2199 Score = 73.8 bits (37), Expect = 7e-10 Identities = 76/89 (85%) Strand = Plus / Minus Query: 373 atcaatttgcaaacaccacattgcgagcttcatcatctcaattacatcctgcttgtgtgc 432 |||| ||||||| ||||||||||| ||||||||||| | ||| || |||| || ||||| Sbjct: 2025 atcattttgcaagcaccacattgcaagcttcatcatttgaatcacttcctcctggtgtga 1966 Query: 433 tagcatgtcattactgttcttgtcaatca 461 | |||||||||||||| ||||||||||| Sbjct: 1965 gaccatgtcattactgtgcttgtcaatca 1937
>ref|XM_471702.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2796 Score = 67.9 bits (34), Expect = 4e-08 Identities = 70/82 (85%) Strand = Plus / Minus Query: 575 acaacaccaaagctatagacatcggccttttctgtgatttgtgatgttaaccattcagga 634 ||||| || ||||| |||||||| | ||||| |||||||||||||||||||||||||| Sbjct: 2420 acaacgccgaagctgtagacatcaactttttcagtgatttgtgatgttaaccattcaggt 2361 Query: 635 gctaaatatccaggcgtgcctc 656 || | |||||| || ||||||| Sbjct: 2360 gccagatatcctggtgtgcctc 2339 Score = 50.1 bits (25), Expect = 0.010 Identities = 28/29 (96%) Strand = Plus / Minus Query: 380 tgcaaacaccacattgcgagcttcatcat 408 ||||| ||||||||||||||||||||||| Sbjct: 2615 tgcaagcaccacattgcgagcttcatcat 2587
>dbj|AK072639.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023133I20, full insert sequence Length = 4259 Score = 67.9 bits (34), Expect = 4e-08 Identities = 70/82 (85%) Strand = Plus / Plus Query: 575 acaacaccaaagctatagacatcggccttttctgtgatttgtgatgttaaccattcagga 634 ||||| || ||||| |||||||| | ||||| |||||||||||||||||||||||||| Sbjct: 325 acaacgccgaagctgtagacatcaactttttcagtgatttgtgatgttaaccattcaggt 384 Query: 635 gctaaatatccaggcgtgcctc 656 || | |||||| || ||||||| Sbjct: 385 gccagatatcctggtgtgcctc 406 Score = 50.1 bits (25), Expect = 0.010 Identities = 28/29 (96%) Strand = Plus / Plus Query: 380 tgcaaacaccacattgcgagcttcatcat 408 ||||| ||||||||||||||||||||||| Sbjct: 130 tgcaagcaccacattgcgagcttcatcat 158
>gb|AF230506.1| Oryza sativa subsp. japonica serine/threonine protein kinase (YK15) gene, partial cds Length = 527 Score = 61.9 bits (31), Expect = 3e-06 Identities = 49/55 (89%) Strand = Plus / Minus Query: 602 ttttctgtgatttgtgatgttaaccattcaggagctaaatatccaggcgtgcctc 656 ||||| |||||||| ||||||||||||||||| || | ||||||||| ||||||| Sbjct: 502 ttttcagtgatttgcgatgttaaccattcaggtgccagatatccaggtgtgcctc 448
>ref|NM_188329.1| Oryza sativa (japonica cultivar-group), Ozsa8080 predicted mRNA Length = 2268 Score = 60.0 bits (30), Expect = 1e-05 Identities = 57/66 (86%) Strand = Plus / Minus Query: 358 aggccttcttttgcaatcaatttgcaaacaccacattgcgagcttcatcatctcaattac 417 ||||||||| ||||||||| | ||||| ||||||||||| |||||||| |||| || || Sbjct: 2172 aggccttctgttgcaatcactctgcaagcaccacattgcaagcttcattatctttatcac 2113 Query: 418 atcctg 423 |||||| Sbjct: 2112 atcctg 2107 Score = 56.0 bits (28), Expect = 2e-04 Identities = 73/88 (82%) Strand = Plus / Minus Query: 574 cacaacaccaaagctatagacatcggccttttctgtgatttgtgatgttaaccattcagg 633 |||||| ||| | ||||||||||| |||| || ||||| || ||||||||||||||||| Sbjct: 1956 cacaactccataactatagacatcaaccttctcggtgatatgagatgttaaccattcagg 1897 Query: 634 agctaaatatccaggcgtgcctcgcatt 661 | ||||||||||| || |||| |||| Sbjct: 1896 ggacaaatatccaggtgttcctctcatt 1869
>ref|NM_196411.1| Oryza sativa (japonica cultivar-group) putative serine /threonine kinase similar to NAK (OSJNBb0044I14.4), mRNA Length = 1287 Score = 54.0 bits (27), Expect = 6e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 574 cacaacaccaaagctatagacatcggccttt 604 |||||||||||||||||||||||| |||||| Sbjct: 852 cacaacaccaaagctatagacatctgccttt 822
>gb|AC146340.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNAa0044A10, from chromosome 10, complete sequence Length = 173374 Score = 54.0 bits (27), Expect = 6e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 574 cacaacaccaaagctatagacatcggccttt 604 |||||||||||||||||||||||| |||||| Sbjct: 159685 cacaacaccaaagctatagacatctgccttt 159655
>gb|AC090487.3| Genomic Sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0044I14, from Chromosome 10, complete sequence Length = 63167 Score = 54.0 bits (27), Expect = 6e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 574 cacaacaccaaagctatagacatcggccttt 604 |||||||||||||||||||||||| |||||| Sbjct: 16857 cacaacaccaaagctatagacatctgccttt 16887
>gb|AC021893.18|AC021893 Genomic Sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0060A14, from chromosome 10, complete sequence Length = 151343 Score = 54.0 bits (27), Expect = 6e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 574 cacaacaccaaagctatagacatcggccttt 604 |||||||||||||||||||||||| |||||| Sbjct: 5813 cacaacaccaaagctatagacatctgccttt 5783
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 54.0 bits (27), Expect = 6e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 574 cacaacaccaaagctatagacatcggccttt 604 |||||||||||||||||||||||| |||||| Sbjct: 13313436 cacaacaccaaagctatagacatctgccttt 13313406
>dbj|AK102358.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033091H20, full insert sequence Length = 1952 Score = 54.0 bits (27), Expect = 6e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 574 cacaacaccaaagctatagacatcggccttt 604 |||||||||||||||||||||||| |||||| Sbjct: 1293 cacaacaccaaagctatagacatctgccttt 1263
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 54.0 bits (27), Expect = 6e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 574 cacaacaccaaagctatagacatcggccttt 604 |||||||||||||||||||||||| |||||| Sbjct: 13320776 cacaacaccaaagctatagacatctgccttt 13320746
>ref|NM_190063.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1494 Score = 50.1 bits (25), Expect = 0.010 Identities = 25/25 (100%) Strand = Plus / Minus Query: 575 acaacaccaaagctatagacatcgg 599 ||||||||||||||||||||||||| Sbjct: 842 acaacaccaaagctatagacatcgg 818
>dbj|AP003266.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0492G09 Length = 142239 Score = 50.1 bits (25), Expect = 0.010 Identities = 25/25 (100%) Strand = Plus / Minus Query: 575 acaacaccaaagctatagacatcgg 599 ||||||||||||||||||||||||| Sbjct: 127714 acaacaccaaagctatagacatcgg 127690
>dbj|AK101371.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033035N01, full insert sequence Length = 2568 Score = 50.1 bits (25), Expect = 0.010 Identities = 25/25 (100%) Strand = Plus / Minus Query: 575 acaacaccaaagctatagacatcgg 599 ||||||||||||||||||||||||| Sbjct: 1155 acaacaccaaagctatagacatcgg 1131
>ref|NM_111149.2| Arabidopsis thaliana ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein-tyrosine kinase AT3G02810 mRNA, complete cds Length = 2146 Score = 48.1 bits (24), Expect = 0.040 Identities = 24/24 (100%) Strand = Plus / Minus Query: 574 cacaacaccaaagctatagacatc 597 |||||||||||||||||||||||| Sbjct: 977 cacaacaccaaagctatagacatc 954
>gb|AC018363.8|ATAC018363 Arabidopsis thaliana chromosome III BAC F13E7 genomic sequence, complete sequence Length = 100559 Score = 48.1 bits (24), Expect = 0.040 Identities = 24/24 (100%) Strand = Plus / Minus Query: 574 cacaacaccaaagctatagacatc 597 |||||||||||||||||||||||| Sbjct: 76590 cacaacaccaaagctatagacatc 76567
>gb|BT004942.1| Arabidopsis thaliana clone U20396 putative protein kinase (At3g02810) mRNA, complete cds Length = 1708 Score = 48.1 bits (24), Expect = 0.040 Identities = 24/24 (100%) Strand = Plus / Minus Query: 574 cacaacaccaaagctatagacatc 597 |||||||||||||||||||||||| Sbjct: 777 cacaacaccaaagctatagacatc 754
>gb|BT004041.1| Arabidopsis thaliana clone RAFL15-02-J08 (R20396) putative protein kinase (At3g02810) mRNA, complete cds Length = 2162 Score = 48.1 bits (24), Expect = 0.040 Identities = 24/24 (100%) Strand = Plus / Minus Query: 574 cacaacaccaaagctatagacatc 597 |||||||||||||||||||||||| Sbjct: 977 cacaacaccaaagctatagacatc 954
>ref|XM_471708.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2469 Score = 46.1 bits (23), Expect = 0.16 Identities = 26/27 (96%) Strand = Plus / Minus Query: 378 tttgcaaacaccacattgcgagcttca 404 ||||||| ||||||||||||||||||| Sbjct: 2290 tttgcaagcaccacattgcgagcttca 2264
>gb|AC144740.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0075A10, complete sequence Length = 171101 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Minus Query: 575 acaacaccaaagctatagacatc 597 ||||||||||||||||||||||| Sbjct: 160238 acaacaccaaagctatagacatc 160216 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 575 acaacaccaaagctatagac 594 |||||||||||||||||||| Sbjct: 150803 acaacaccaaagctatagac 150784
>gb|AC109596.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1593_C11, complete sequence Length = 112065 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Minus Query: 575 acaacaccaaagctatagacatc 597 ||||||||||||||||||||||| Sbjct: 22934 acaacaccaaagctatagacatc 22912 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 575 acaacaccaaagctatagac 594 |||||||||||||||||||| Sbjct: 43416 acaacaccaaagctatagac 43397 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 578 acaccaaagctatagacatc 597 |||||||||||||||||||| Sbjct: 35334 acaccaaagctatagacatc 35315 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 575 acaacaccaaagctatagac 594 |||||||||||||||||||| Sbjct: 13499 acaacaccaaagctatagac 13480
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Plus Query: 575 acaacaccaaagctatagacatc 597 ||||||||||||||||||||||| Sbjct: 11522845 acaacaccaaagctatagacatc 11522867 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Plus Query: 575 acaacaccaaagctatagacatc 597 ||||||||||||||||||||||| Sbjct: 11430457 acaacaccaaagctatagacatc 11430479 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Plus Query: 578 acaccaaagctatagacatcgg 599 |||||||||||||||||||||| Sbjct: 21506288 acaccaaagctatagacatcgg 21506309 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Plus Query: 578 acaccaaagctatagacatcgg 599 |||||||||||||||||||||| Sbjct: 21501679 acaccaaagctatagacatcgg 21501700 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Plus Query: 578 acaccaaagctatagacatcgg 599 |||||||||||||||||||||| Sbjct: 21470305 acaccaaagctatagacatcgg 21470326 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 575 acaacaccaaagctatagac 594 |||||||||||||||||||| Sbjct: 10912307 acaacaccaaagctatagac 10912288 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 603 tttctgtgatttgtgatgtt 622 |||||||||||||||||||| Sbjct: 9045106 tttctgtgatttgtgatgtt 9045125
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Minus Query: 575 acaacaccaaagctatagacatc 597 ||||||||||||||||||||||| Sbjct: 25918706 acaacaccaaagctatagacatc 25918684 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 575 acaacaccaaagctatagac 594 |||||||||||||||||||| Sbjct: 25940288 acaacaccaaagctatagac 25940269 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 578 acaccaaagctatagacatc 597 |||||||||||||||||||| Sbjct: 25931106 acaccaaagctatagacatc 25931087 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 575 acaacaccaaagctatagac 594 |||||||||||||||||||| Sbjct: 25909271 acaacaccaaagctatagac 25909252
>dbj|AP005836.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0013F08 Length = 166989 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Plus Query: 575 acaacaccaaagctatagacatc 597 ||||||||||||||||||||||| Sbjct: 38852 acaacaccaaagctatagacatc 38874
>dbj|AP006526.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0591A03 Length = 147043 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Plus Query: 575 acaacaccaaagctatagacatc 597 ||||||||||||||||||||||| Sbjct: 64145 acaacaccaaagctatagacatc 64167
>dbj|AK120189.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013034P20, full insert sequence Length = 2860 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Minus Query: 575 acaacaccaaagctatagacatc 597 ||||||||||||||||||||||| Sbjct: 2270 acaacaccaaagctatagacatc 2248
>ref|NM_188527.1| Oryza sativa (japonica cultivar-group), Ozsa8196 predicted mRNA Length = 2250 Score = 44.1 bits (22), Expect = 0.62 Identities = 25/26 (96%) Strand = Plus / Minus Query: 578 acaccaaagctatagacatcggcctt 603 |||||||||||||||||||| ||||| Sbjct: 1910 acaccaaagctatagacatctgcctt 1885
>ref|NM_191518.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2571 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Minus Query: 578 acaccaaagctatagacatcgg 599 |||||||||||||||||||||| Sbjct: 2195 acaccaaagctatagacatcgg 2174
>ref|NM_015172.2| Homo sapiens BAT2 domain containing 1 (BAT2D1), mRNA Length = 10383 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Minus Query: 221 gaagctagaggtggaactgagg 242 |||||||||||||||||||||| Sbjct: 5518 gaagctagaggtggaactgagg 5497
>emb|AL021579.1|HS598F2 Human DNA sequence from clone RP4-598F2 on chromosome 1q23.1-24.3 Contains part of the gene for HBxAg transactivated protein 2 (XTP2), complete sequence Length = 99886 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Minus Query: 221 gaagctagaggtggaactgagg 242 |||||||||||||||||||||| Sbjct: 67617 gaagctagaggtggaactgagg 67596
>emb|AL138731.10| Human DNA sequence from clone RP1-23E21 on chromosome 6 Contains a novel gene and a 26S proteasome-associated PAD1 homolog POH1 pseudogene, complete sequence Length = 72312 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Minus Query: 480 tcttcaccttttcttccaacag 501 |||||||||||||||||||||| Sbjct: 10225 tcttcaccttttcttccaacag 10204
>emb|AL162004.1|HSM802522 Homo sapiens mRNA; cDNA DKFZp434M1616 (from clone DKFZp434M1616) Length = 5630 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Minus Query: 221 gaagctagaggtggaactgagg 242 |||||||||||||||||||||| Sbjct: 895 gaagctagaggtggaactgagg 874
>dbj|AB029019.2| Homo sapiens mRNA for KIAA1096 protein, partial cds Length = 7421 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Minus Query: 221 gaagctagaggtggaactgagg 242 |||||||||||||||||||||| Sbjct: 2464 gaagctagaggtggaactgagg 2443
>dbj|AK124374.1| Homo sapiens cDNA FLJ42383 fis, clone UTERU2036623 Length = 2282 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Minus Query: 221 gaagctagaggtggaactgagg 242 |||||||||||||||||||||| Sbjct: 1186 gaagctagaggtggaactgagg 1165
>gb|AF230509.1| Oryza sativa subsp. japonica serine/threonine protein kinase (YK20) gene, partial cds Length = 528 Score = 44.1 bits (22), Expect = 0.62 Identities = 46/54 (85%) Strand = Plus / Minus Query: 608 gtgatttgtgatgttaaccattcaggagctaaatatccaggcgtgcctcgcatt 661 ||||| || ||||||||||||||||| | ||||||||||| || |||| |||| Sbjct: 497 gtgatatgagatgttaaccattcaggggacaaatatccaggtgttcctctcatt 444
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 44.1 bits (22), Expect = 0.62 Identities = 28/30 (93%) Strand = Plus / Minus Query: 575 acaacaccaaagctatagacatcggccttt 604 ||||||||||||||| ||||||| |||||| Sbjct: 30306557 acaacaccaaagctaaagacatcagccttt 30306528 Score = 40.1 bits (20), Expect = 9.7 Identities = 41/48 (85%) Strand = Plus / Minus Query: 565 ttccatgaccacaacaccaaagctatagacatcggccttttctgtgat 612 |||||| | |||||| ||||||||||| ||||| ||||||| ||||| Sbjct: 20570157 ttccattatcacaacgccaaagctatacacatcaaccttttcagtgat 20570110
>gb|AF488829.1| Homo sapiens HBxAg transactivated protein 2 (XTP2) mRNA, complete cds Length = 8106 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Minus Query: 221 gaagctagaggtggaactgagg 242 |||||||||||||||||||||| Sbjct: 5252 gaagctagaggtggaactgagg 5231
>dbj|AP001800.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0443E05 Length = 176935 Score = 44.1 bits (22), Expect = 0.62 Identities = 25/26 (96%) Strand = Plus / Plus Query: 578 acaccaaagctatagacatcggcctt 603 |||||||||||||||||||| ||||| Sbjct: 133411 acaccaaagctatagacatctgcctt 133436
>dbj|AP002835.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0417G05 Length = 147803 Score = 44.1 bits (22), Expect = 0.62 Identities = 25/26 (96%) Strand = Plus / Plus Query: 578 acaccaaagctatagacatcggcctt 603 |||||||||||||||||||| ||||| Sbjct: 63320 acaccaaagctatagacatctgcctt 63345
>dbj|AP005742.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0489D11 Length = 150757 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Plus Query: 578 acaccaaagctatagacatcgg 599 |||||||||||||||||||||| Sbjct: 67898 acaccaaagctatagacatcgg 67919 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Plus Query: 578 acaccaaagctatagacatcgg 599 |||||||||||||||||||||| Sbjct: 63289 acaccaaagctatagacatcgg 63310 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Plus Query: 578 acaccaaagctatagacatcgg 599 |||||||||||||||||||||| Sbjct: 31915 acaccaaagctatagacatcgg 31936
>dbj|AP005679.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1210_A07 Length = 131394 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Plus Query: 578 acaccaaagctatagacatcgg 599 |||||||||||||||||||||| Sbjct: 123393 acaccaaagctatagacatcgg 123414 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Plus Query: 578 acaccaaagctatagacatcgg 599 |||||||||||||||||||||| Sbjct: 118784 acaccaaagctatagacatcgg 118805 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Plus Query: 578 acaccaaagctatagacatcgg 599 |||||||||||||||||||||| Sbjct: 87410 acaccaaagctatagacatcgg 87431
>dbj|AP007231.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0535F09 Length = 175050 Score = 44.1 bits (22), Expect = 0.62 Identities = 28/30 (93%) Strand = Plus / Minus Query: 575 acaacaccaaagctatagacatcggccttt 604 ||||||||||||||| ||||||| |||||| Sbjct: 172892 acaacaccaaagctaaagacatcagccttt 172863
>dbj|AP003685.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0548E04 Length = 138037 Score = 44.1 bits (22), Expect = 0.62 Identities = 28/30 (93%) Strand = Plus / Minus Query: 575 acaacaccaaagctatagacatcggccttt 604 ||||||||||||||| ||||||| |||||| Sbjct: 53152 acaacaccaaagctaaagacatcagccttt 53123
>dbj|AP003406.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1070A12 Length = 148449 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Minus Query: 578 acaccaaagctatagacatcgg 599 |||||||||||||||||||||| Sbjct: 17810 acaccaaagctatagacatcgg 17789
>dbj|AK073747.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033068K18, full insert sequence Length = 1961 Score = 44.1 bits (22), Expect = 0.62 Identities = 28/30 (93%) Strand = Plus / Minus Query: 575 acaacaccaaagctatagacatcggccttt 604 ||||||||||||||| ||||||| |||||| Sbjct: 1455 acaacaccaaagctaaagacatcagccttt 1426
>emb|AL096857.1|HS598F21A Novel human mRNA from chromosome 1, which has similarities to BAT2 genes Length = 10174 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Minus Query: 221 gaagctagaggtggaactgagg 242 |||||||||||||||||||||| Sbjct: 5309 gaagctagaggtggaactgagg 5288
>emb|CR925781.6| Zebrafish DNA sequence from clone DKEY-3B23 in linkage group 10, complete sequence Length = 202134 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Plus Query: 92 tcagattatagtattttgagaa 113 |||||||||||||||||||||| Sbjct: 200266 tcagattatagtattttgagaa 200287
>gb|AC120889.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0018K14, complete sequence Length = 152725 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 577 aacaccaaagctatagacatc 597 ||||||||||||||||||||| Sbjct: 136942 aacaccaaagctatagacatc 136962
>gb|AC133291.2| Oryza sativa (japonica cultivar-group) chromosome 11 PAC clone P0542B04, complete sequence Length = 182823 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 577 aacaccaaagctatagacatc 597 ||||||||||||||||||||| Sbjct: 36986 aacaccaaagctatagacatc 37006
>gb|AC129178.4| Mus musculus BAC clone RP23-217G18 from chromosome 16, complete sequence Length = 185769 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 216 catgtgaagctagaggtggaa 236 ||||||||||||||||||||| Sbjct: 55054 catgtgaagctagaggtggaa 55074
>gb|AC007542.3| Homo sapiens 12p12 BAC RPCI11-320J20 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 162081 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 49 attaaaatactttgcaggtaaattt 73 |||||||||||||||||||| |||| Sbjct: 97907 attaaaatactttgcaggtatattt 97883
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 577 aacaccaaagctatagacatc 597 ||||||||||||||||||||| Sbjct: 20217844 aacaccaaagctatagacatc 20217864
>gb|AY273912.1| Bolomys lasiurus TK 64302 cytochrome b gene, complete cds; mitochondrial Length = 1140 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 29 agaacaagaaggtttgcgata 49 ||||||||||||||||||||| Sbjct: 1004 agaacaagaaggtttgcgata 984
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 577 aacaccaaagctatagacatc 597 ||||||||||||||||||||| Sbjct: 20502713 aacaccaaagctatagacatc 20502733
>ref|NM_124251.3| Arabidopsis thaliana kinase AT5G48740 mRNA, complete cds Length = 3383 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 578 acaccaaagctatagacatc 597 |||||||||||||||||||| Sbjct: 2445 acaccaaagctatagacatc 2426
>ref|XM_550053.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2391 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 574 cacaacaccaaagctatagacatc 597 |||||||||||||||||| ||||| Sbjct: 1714 cacaacaccaaagctatacacatc 1691
>ref|NM_194082.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3510 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 574 cacaacaccaaagctatagacatc 597 ||||||||||||||| |||||||| Sbjct: 2664 cacaacaccaaagctgtagacatc 2641
>gb|AC113005.10| Mus musculus chromosome 3, clone RP23-299B23, complete sequence Length = 218917 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 517 gctctcttctgatagagaag 536 |||||||||||||||||||| Sbjct: 30517 gctctcttctgatagagaag 30498
>gb|AC161496.6| Mus musculus chromosome 3, clone RP23-119A9, complete sequence Length = 203655 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 517 gctctcttctgatagagaag 536 |||||||||||||||||||| Sbjct: 82983 gctctcttctgatagagaag 83002
>gb|AC011705.11| Drosophila melanogaster clone BACR10C18, complete sequence Length = 170975 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 601 cttttctgtgatttgtgatg 620 |||||||||||||||||||| Sbjct: 35555 cttttctgtgatttgtgatg 35574
>gb|AC123654.9| Mus musculus chromosome 15, clone RP23-161D16, complete sequence Length = 182376 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 211 tgatacatgtgaagctagag 230 |||||||||||||||||||| Sbjct: 50102 tgatacatgtgaagctagag 50083
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 574 cacaacaccaaagctatagacatc 597 ||||||||||||||| |||||||| Sbjct: 31777718 cacaacaccaaagctgtagacatc 31777695
>gb|AC111008.6| Mus musculus BAC clone RP23-415J21 from chromosome 7, complete sequence Length = 193593 Score = 40.1 bits (20), Expect = 9.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 477 cattcttcaccttttcttccaacagggt 504 ||||||||| | |||||||||||||||| Sbjct: 50590 cattcttcaacatttcttccaacagggt 50617
>emb|AL357274.9| Human DNA sequence from clone RP11-685P13 on chromosome 6, complete sequence Length = 133565 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 attaaaatactttgcaggta 68 |||||||||||||||||||| Sbjct: 73778 attaaaatactttgcaggta 73759
>emb|AL160290.15| Human DNA sequence from clone RP11-338O1 on chromosome 10 Contains a novel gene and the 5' end of a novel gene, complete sequence Length = 201397 Score = 40.1 bits (20), Expect = 9.7 Identities = 29/32 (90%) Strand = Plus / Minus Query: 307 gctctctgcattcatggtaccttccaagacct 338 |||| ||||| |||||||| |||||||||||| Sbjct: 32810 gctccctgcactcatggtatcttccaagacct 32779
>gb|AC092781.6| Oryza sativa chromosome 3 BAC OSJNBb0094O03 genomic sequence, complete sequence Length = 134496 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 574 cacaacaccaaagctatagacatc 597 ||||||||||||||| |||||||| Sbjct: 102944 cacaacaccaaagctgtagacatc 102921
>emb|BX572091.1| Prochlorococcus marinus MED4 complete genome; segment 2/5 Length = 349082 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 617 gatgttaaccattcaggagctaaa 640 ||||||||||||||||||| |||| Sbjct: 73891 gatgttaaccattcaggagttaaa 73914
>gb|AC159194.3| Mus musculus BAC clone RP23-469D18 from chromosome 7, complete sequence Length = 213870 Score = 40.1 bits (20), Expect = 9.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 477 cattcttcaccttttcttccaacagggt 504 ||||||||| | |||||||||||||||| Sbjct: 107449 cattcttcaacatttcttccaacagggt 107476
>emb|AL606612.3|OSJN00043 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0021I10, complete sequence Length = 105538 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 574 cacaacaccaaagctatagacatc 597 ||||||||||||||| |||||||| Sbjct: 100833 cacaacaccaaagctgtagacatc 100810
>emb|AL161532.2|ATCHRIV32 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 32 Length = 198788 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 578 acaccaaagctatagacatc 597 |||||||||||||||||||| Sbjct: 34177 acaccaaagctatagacatc 34158
>emb|AL050399.1|ATF25E4 Arabidopsis thaliana DNA chromosome 4, BAC clone F25E4 (ESSA project) Length = 80019 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 578 acaccaaagctatagacatc 597 |||||||||||||||||||| Sbjct: 55528 acaccaaagctatagacatc 55509
>gb|AC163270.5| Mus musculus chromosome 1, clone RP24-292B21, complete sequence Length = 154928 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 311 tctgcattcatggtaccttc 330 |||||||||||||||||||| Sbjct: 138757 tctgcattcatggtaccttc 138776
>gb|AC010036.6| Drosophila melanogaster 3L BAC RP98-7K20 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 190369 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 580 accaaagctatagacatcgg 599 |||||||||||||||||||| Sbjct: 33810 accaaagctatagacatcgg 33791
>gb|AC093957.3| Drosophila melanogaster 3L BAC RP98-14E19 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 182212 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 580 accaaagctatagacatcgg 599 |||||||||||||||||||| Sbjct: 45590 accaaagctatagacatcgg 45571
>gb|AC097498.3| Homo sapiens BAC clone RP11-326N15 from 4, complete sequence Length = 144511 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 268 attcacttgatttgtggcaa 287 |||||||||||||||||||| Sbjct: 39475 attcacttgatttgtggcaa 39456
>gb|AC182663.2| Populus trichocarpa clone Pop1-16M7, complete sequence Length = 77392 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 578 acaccaaagctatagacatc 597 |||||||||||||||||||| Sbjct: 65031 acaccaaagctatagacatc 65050
>gb|AC154437.2| Mus musculus BAC clone RP24-194D17 from chromosome 13, complete sequence Length = 180558 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 509 agatggatgctctcttctga 528 |||||||||||||||||||| Sbjct: 110335 agatggatgctctcttctga 110354
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 574 cacaacaccaaagctatagacatc 597 ||||||||||||||| |||||||| Sbjct: 31868234 cacaacaccaaagctgtagacatc 31868211
>emb|AL606992.3|OSJN00116 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0073L13, complete sequence Length = 143386 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 574 cacaacaccaaagctatagacatc 597 ||||||||||||||| |||||||| Sbjct: 9354 cacaacaccaaagctgtagacatc 9331
>gb|AC101455.9| Mus musculus chromosome 1, clone RP23-185E17, complete sequence Length = 185594 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 311 tctgcattcatggtaccttc 330 |||||||||||||||||||| Sbjct: 99560 tctgcattcatggtaccttc 99541
>dbj|AP008246.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1642C07 Length = 206004 Score = 40.1 bits (20), Expect = 9.7 Identities = 29/32 (90%) Strand = Plus / Minus Query: 578 acaccaaagctatagacatcggccttttctgt 609 |||||||||||||| |||||| ||||||||| Sbjct: 115427 acaccaaagctataaacatcgctcttttctgt 115396
>gb|AC027290.31| Homo sapiens 12 BAC RP11-463O12 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 177332 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 189 ttttctcatttcacctgggg 208 |||||||||||||||||||| Sbjct: 60245 ttttctcatttcacctgggg 60264
>gb|AF070687.1|AF070687 Drosophila melanogaster cytoplasmic dynein intermediate chain isoform (Cdic) gene, complete cds; and axonemal dynein intermediate chain (Sdic) gene, partial cds Length = 13833 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 601 cttttctgtgatttgtgatg 620 |||||||||||||||||||| Sbjct: 4446 cttttctgtgatttgtgatg 4427
>gb|AC090826.15| Homo sapiens chromosome 15, clone CTD-2311M21, complete sequence Length = 169518 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 470 aagtgagcattcttcaccttttct 493 ||||||||||||||||||| |||| Sbjct: 157513 aagtgagcattcttcacctcttct 157536
>gb|BT004222.1| Arabidopsis thaliana clone RAFL15-25-J08 (R20792) At5g48740 mRNA, complete sequence Length = 2891 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 578 acaccaaagctatagacatc 597 |||||||||||||||||||| Sbjct: 2446 acaccaaagctatagacatc 2427
>dbj|AP005313.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0512H04 Length = 151049 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 575 acaacaccaaagctatagac 594 |||||||||||||||||||| Sbjct: 136030 acaacaccaaagctatagac 136011
>dbj|AP003250.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0443D08 Length = 146670 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 574 cacaacaccaaagctatagacatc 597 |||||||||||||||||| ||||| Sbjct: 20102 cacaacaccaaagctatacacatc 20125
>dbj|AP003686.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0659D09 Length = 168253 Score = 40.1 bits (20), Expect = 9.7 Identities = 41/48 (85%) Strand = Plus / Minus Query: 565 ttccatgaccacaacaccaaagctatagacatcggccttttctgtgat 612 |||||| | |||||| ||||||||||| ||||| ||||||| ||||| Sbjct: 142452 ttccattatcacaacgccaaagctatacacatcaaccttttcagtgat 142405
>dbj|AP005767.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0035G04 Length = 155636 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 603 tttctgtgatttgtgatgtt 622 |||||||||||||||||||| Sbjct: 15891 tttctgtgatttgtgatgtt 15910
>dbj|AP005780.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBb0051H02 Length = 136520 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 603 tttctgtgatttgtgatgtt 622 |||||||||||||||||||| Sbjct: 88702 tttctgtgatttgtgatgtt 88721
>dbj|AP005400.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0698G06 Length = 138282 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 575 acaacaccaaagctatagac 594 |||||||||||||||||||| Sbjct: 52012 acaacaccaaagctatagac 51993
>dbj|AB012242.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K24G6 Length = 78973 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 578 acaccaaagctatagacatc 597 |||||||||||||||||||| Sbjct: 20749 acaccaaagctatagacatc 20768
>dbj|AK102670.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033101P17, full insert sequence Length = 3031 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 574 cacaacaccaaagctatagacatc 597 ||||||||||||||| |||||||| Sbjct: 2234 cacaacaccaaagctgtagacatc 2211
>dbj|AK073571.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033046G16, full insert sequence Length = 3140 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 575 acaacaccaaagctatagac 594 |||||||||||||||||||| Sbjct: 2452 acaacaccaaagctatagac 2433
>dbj|AK065470.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013020L24, full insert sequence Length = 2391 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 574 cacaacaccaaagctatagacatc 597 |||||||||||||||||| ||||| Sbjct: 1714 cacaacaccaaagctatacacatc 1691
>dbj|AK065388.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013022I17, full insert sequence Length = 2882 Score = 40.1 bits (20), Expect = 9.7 Identities = 41/48 (85%) Strand = Plus / Minus Query: 565 ttccatgaccacaacaccaaagctatagacatcggccttttctgtgat 612 |||||| | |||||| ||||||||||| ||||| ||||||| ||||| Sbjct: 2365 ttccattatcacaacgccaaagctatacacatcaaccttttcagtgat 2318
>gb|AE003572.4| Drosophila melanogaster chromosome X, section 67 of 74 of the complete sequence Length = 91383 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 601 cttttctgtgatttgtgatg 620 |||||||||||||||||||| Sbjct: 4109 cttttctgtgatttgtgatg 4128
>gb|AE003534.3| Drosophila melanogaster chromosome 3L, section 51 of 83 of the complete sequence Length = 263717 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 580 accaaagctatagacatcgg 599 |||||||||||||||||||| Sbjct: 95366 accaaagctatagacatcgg 95347
>gb|AC005666.1|AC005666 Homo sapiens chromosome 17, clone hRPK.112_H_10, complete sequence Length = 158905 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 480 tcttcaccttttcttccaac 499 |||||||||||||||||||| Sbjct: 89447 tcttcaccttttcttccaac 89466
>emb|AL928682.11| Mouse DNA sequence from clone RP23-143K9 on chromosome X, complete sequence Length = 135431 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 211 tgatacatgtgaagctagag 230 |||||||||||||||||||| Sbjct: 84356 tgatacatgtgaagctagag 84375
>emb|BX005036.6| Mouse DNA sequence from clone RP23-185E17 on chromosome 1, complete sequence Length = 185591 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 311 tctgcattcatggtaccttc 330 |||||||||||||||||||| Sbjct: 99552 tctgcattcatggtaccttc 99533
>gb|AY885237.1| Homo sapiens sema domain, immunoglobulin domain (Ig), and GPI membrane anchor, (semaphorin) 7A (SEMA7A) gene, complete cds Length = 27880 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 470 aagtgagcattcttcaccttttct 493 ||||||||||||||||||| |||| Sbjct: 15644 aagtgagcattcttcacctcttct 15621
>emb|AL844210.7| Mouse DNA sequence from clone RP23-235I13 on chromosome X, complete sequence Length = 140246 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 138 ttacataagaatatctcatg 157 |||||||||||||||||||| Sbjct: 91928 ttacataagaatatctcatg 91909
>emb|AL671238.13| Mouse DNA sequence from clone RP23-67D6 on chromosome 4, complete sequence Length = 216190 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 125 cttatcatttcctttacata 144 |||||||||||||||||||| Sbjct: 91782 cttatcatttcctttacata 91763
>emb|AL645586.9| Mouse DNA sequence from clone RP23-302O5 on chromosome X, complete sequence Length = 202500 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 210 ctgatacatgtgaagctaga 229 |||||||||||||||||||| Sbjct: 62460 ctgatacatgtgaagctaga 62479
>gb|AC012435.13| Homo sapiens chromosome 15, clone RP11-10O17, complete sequence Length = 132994 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 470 aagtgagcattcttcaccttttct 493 ||||||||||||||||||| |||| Sbjct: 13283 aagtgagcattcttcacctcttct 13306 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7,022,333 Number of Sequences: 3902068 Number of extensions: 7022333 Number of successful extensions: 135192 Number of sequences better than 10.0: 122 Number of HSP's better than 10.0 without gapping: 129 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 134166 Number of HSP's gapped (non-prelim): 1011 length of query: 711 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 688 effective length of database: 17,143,297,704 effective search space: 11794588820352 effective search space used: 11794588820352 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
