ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbah61l14
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|M55447.1|BLYRCAA2 Hordeum vulgare rubisco activase (RcaA2) mR... 977 0.0
2gb|AY206372.1| Triticum aestivum ribulose-1,5-bisphosphate carbo... 759 0.0
3gb|BC029790.1| Homo sapiens, clone IMAGE:5192697, mRNA 753 0.0
4gb|M55449.1|BLYRCABG Hordeum vulgare subsp. vulgare ribulose 1,5... 609 e-171
5gb|AY312574.1| Deschampsia antarctica Rubisco activase beta form... 563 e-157
6gb|M55446.1|BLYRCAA1 Hordeum vulgare rubisco activase (RcaA1) mR... 509 e-141
7emb|AJ635203.1| Triticum durum ssp. durum partial mRNA for putat... 466 e-128
8gb|AY312573.1| Deschampsia antarctica Rubisco activase alpha for... 335 9e-89
9dbj|AK104332.1| Oryza sativa (japonica cultivar-group) cDNA clon... 135 2e-28
10dbj|AK064986.1| Oryza sativa (japonica cultivar-group) cDNA clon... 135 2e-28
11dbj|AK060847.1| Oryza sativa (japonica cultivar-group) cDNA clon... 135 2e-28
12dbj|AK060841.1| Oryza sativa (japonica cultivar-group) cDNA clon... 135 2e-28
13dbj|AB034748.1| Oryza sativa OsrcaA2 mRNA for RuBisCO activase s... 135 2e-28
14gb|AC137064.4| Oryza sativa (japonica cultivar-group) chromosome... 133 7e-28
15gb|AC133008.3| Oryza sativa (japonica cultivar-group) chromosome... 133 7e-28
16gb|U74321.1|OSU74321 Oryza sativa ribulose-1,5-bisphosphate carb... 133 7e-28
17dbj|AB110180.1| Oryza sativa (japonica cultivar-group) mRNA for ... 133 7e-28
18dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 133 7e-28
19gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 133 7e-28
20dbj|AB034698.1| Oryza sativa OsrcaA1 mRNA for RuBisCO activase l... 133 7e-28
21gb|AF338238.1|AF338238 Zantedeschia aethiopica rubisco activase ... 125 2e-25
22gb|AF349638.1|AF349638 Oryza sativa ribulose-1,5-bisphosphate ca... 123 7e-25
23dbj|AK119513.1| Oryza sativa (japonica cultivar-group) cDNA clon... 123 7e-25
24gb|DQ359157.1| Oryza sativa (japonica cultivar-group) chloroplas... 121 3e-24
25gb|AF338237.1|AF338237 Zantedeschia aethiopica rubisco activase ... 119 1e-23
26gb|AF338240.1|AF338240 Zantedeschia aethiopica rubisco activase ... 103 6e-19
27gb|DQ023668.1| Oryza sativa (indica cultivar-group) cultivar Tet... 101 2e-18
28gb|AF338239.1|AF338239 Zantedeschia aethiopica rubisco activase ... 98 4e-17
29gb|AF251264.1|AF251264 Triticum aestivum ribulose bisphosphate c... 98 4e-17
30gb|AF305876.2| Zea mays ribulose 1,5-bisphosphate carboxylase/ox... 96 1e-16
31gb|AF084478.3| Zea mays ribulose-1,5-bisphosphate carboxylase/ox... 96 1e-16
32gb|AY110044.1| Zea mays CL1146_1 mRNA sequence 96 1e-16
33gb|M55448.1|BLYRCAB Hordeum vulgare rubisco activase (RcaB) mRNA... 82 2e-12
34emb|X60093.1|BPNIR1 B.pendula mRNA for nitrite reductase 80 9e-12
35dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 78 4e-11
36dbj|AP005592.2| Oryza sativa (japonica cultivar-group) genomic D... 78 4e-11
37emb|Z21794.1|MDRBSCACA M.domestica ribulose-1,5-bisphosphate car... 56 1e-04
38gb|AY312576.1| Larrea tridentata Rubisco activase beta form prec... 44 0.49
39gb|AC114810.4| Homo sapiens BAC clone RP11-1293J14 from 2, compl... 44 0.49
40emb|BX000451.4| Zebrafish DNA sequence from clone CH211-30E10, c... 44 0.49
41gb|AC166748.3| Mus musculus chromosome 19, clone RP23-345M21, co... 42 1.9
42gb|AC138278.9| Mus musculus chromosome 8, clone RP23-378E4, comp... 42 1.9
43gb|AC161354.2| Mus musculus chromosome 8, clone RP23-373C4, comp... 42 1.9
44gb|AC152426.10| Mus musculus chromosome 19, clone RP23-216E17, c... 42 1.9
45gb|AC117829.7| Mus musculus chromosome 19, clone RP24-95D15, com... 42 1.9
46dbj|AK040781.1| Mus musculus adult male aorta and vein cDNA, RIK... 42 1.9
47dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.9
48gb|AC144525.3| Homo sapiens BAC clone CTC-833E13 from 2, complet... 42 1.9
49emb|Y10657.1|CLRCAGENE C.littorale rca gene 42 1.9
50gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 42 1.9
51emb|AL731748.3|CNS08C7X Oryza sativa chromosome 12, . BAC OSJNBa... 42 1.9
52gb|AC164586.7| Mus musculus chromosome 8, clone RP24-258B3, comp... 42 1.9
53gb|AC003067.59| Mus musculus Chromosome 16 BAC Clone tbx3 Synten... 40 7.6
54gb|U60105.1| Bos taurus large conductance calcium-activated pota... 40 7.6
55gb|AF414359.1|AF414356S4 Mus musculus thioredoxin reductase (Trx... 40 7.6
56gb|AY312575.1| Larrea tridentata Rubisco activase alpha form pre... 40 7.6
57gb|AC133488.30| Mus musculus strain C57BL/6J clone rp23-432e14, ... 40 7.6
58ref|XM_765396.1| Giardia lamblia ATCC 50803 heat shock protein (... 40 7.6
59ref|XM_751239.1| Ustilago maydis 521 hypothetical protein (UM001... 40 7.6
60gb|AC019210.7| Homo sapiens BAC clone RP11-449G3 from 7, complet... 40 7.6
61gb|AC011228.9| Homo sapiens BAC clone GS1-18A18 from 7, complete... 40 7.6
62gb|AC140953.1| Pan troglodytes BAC clone RP43-37K18 from 7, comp... 40 7.6
63gb|AF026000.2| Sus scrofa calcium-activated potassium channel al... 40 7.6
64gb|AC139338.3| Homo sapiens 3 BAC RP11-449O23 (Roswell Park Canc... 40 7.6
65gb|AC161351.3| Mus musculus chromosome 15, clone RP24-142I15, co... 40 7.6
66ref|NM_174680.2| Bos taurus potassium large conductance calcium-... 40 7.6
67gb|AE011750.1| Xanthomonas axonopodis pv. citri str. 306, secti... 40 7.6
68dbj|AP007170.1| Aspergillus oryzae RIB40 genomic DNA, SC138 40 7.6
69gb|AC003066.18| Mus musculus Chromosome 16 BAC Clone tbx1 Synten... 40 7.6
70gb|AY033474.1| Bos taurus BK potassium ion channel isoform C mRN... 40 7.6
71gb|AY033473.1| Bos taurus BK potassium ion channel isoform B mRN... 40 7.6
72gb|AY033472.1| Bos taurus BK potassium ion channel isoform A mRN... 40 7.6
73emb|BX000985.18| Zebrafish DNA sequence from clone DKEY-13M3 in ... 40 7.6
74gb|AC102845.9| Mus musculus chromosome 15, clone RP24-389O7, com... 40 7.6
75ref|NM_214219.1| Sus scrofa calcium-activated potassium channel ... 40 7.6
76ref|XM_222660.3| PREDICTED: Rattus norvegicus leiomodin 1 (smoot... 40 7.6
77gb|AC133487.14| Mus musculus strain C57BL/6J clone rp23-285e22, ... 40 7.6
78gb|AC007625.2|AC007625 Genomic sequence of Homo sapiens clone 23... 40 7.6
79gb|AC091764.35| Mus musculus strain C57BL/6J chromosome 10 clone... 40 7.6 
>gb|M55447.1|BLYRCAA2 Hordeum vulgare rubisco activase (RcaA2) mRNA, complete cds
          Length = 1709

 Score =  977 bits (493), Expect = 0.0
 Identities = 531/537 (98%), Gaps = 5/537 (0%)
 Strand = Plus / Minus

                                                                        
Query: 31   aatgggtatactcaatat-atttagagatatattaacaaaacatgcccagcaatcgcttg 89
            ||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 1702 aatgggtatacacaatattatttagagatatattaacaaaacatgcccagcaatcgcttg 1643

                                                                        
Query: 90   gatgcgatgcggacttag-gtaggtaaaacatcagatattaaaagtggcatgcttaaaag 148
            |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 1642 gatgcgatgcggacttagtgtaggtaaaacatcagatattaaaagtggcatgcttaaaag 1583

                                                                        
Query: 149  gtgtaaaggcagctgccgt-cgtcgctccttgccgttgggtcgtagttcttggcattttg 207
            ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 1582 gtgtaaaggcagctgccgttcgtcgctccttgccgttgggtcgtagttcttggcattttg 1523

                                                                        
Query: 208  gtcggtgcaaccttccggca-cgggcaaagtaccttgctgtgctcctttacctcctccta 266
            |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 1522 gtcggtgcaaccttccggcatcgggcaaagtaccttgctgtgctcctttacctcctccta 1463

                                                                        
Query: 267  tgcagcaagagatggtgggtgt-gtatggagaattttctaaccgtagaaggaaccagtct 325
            |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 1462 tgcagcaagagatggtgggtgttgtatggagaattttctaaccgtagaaggaaccagtct 1403

                                                                        
Query: 326  tcatcgcatcctggttagcatcacccagagctgcctggctcatgtaggtgtcagcaagct 385
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1402 tcatcgcatcctggttagcatcacccagagctgcctggctcatgtaggtgtcagcaagct 1343

                                                                        
Query: 386  gcacacgcttgacattgtcctgctcctggacgagcatgtgcccgtactctagcagcttct 445
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1342 gcacacgcttgacattgtcctgctcctggacgagcatgtgcccgtactctagcagcttct 1283

                                                                        
Query: 446  cgactgtcatctttggctgctcgaaggtcacgggcccgtcccgcgagttcaccagcctct 505
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1282 cgactgtcatctttggctgctcgaaggtcacgggcccgtcccgcgagttcaccagcctct 1223

                                                                     
Query: 506  tgccaatgttctcgattccggtagagccgacccacttgcgcacctcatcgtcgtaca 562
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1222 tgccaatgttctcgattccggtagagccgacccacttgcgcacctcatcgtcgtaca 1166
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>gb|AY206372.1| Triticum aestivum ribulose-1,5-bisphosphate carboxylase activase
           precursor RNA, partial cds; nuclear gene for chloroplast
           product
          Length = 850

 Score =  759 bits (383), Expect = 0.0
 Identities = 525/568 (92%), Gaps = 12/568 (2%)
 Strand = Plus / Minus

                                                                       
Query: 2   aatgataagtaggtgtattggtctttgccaa-tgggtatactcaatatatttagagatat 60
           ||||||||||||   |||| |||||| |||| | |||||||||||||| ||||    |||
Sbjct: 798 aatgataagtagtcctatttgtctttaccaaataggtatactcaatatcttta----tat 743

                                                                       
Query: 61  attaacaaaacatgcccagcaatcgcttggatgcgatgcgg-acttaggta-----ggta 114
           ||||||||||||||||||||||||||||||||||||||||| |||||||||     | ||
Sbjct: 742 attaacaaaacatgcccagcaatcgcttggatgcgatgcggtacttaggtacaaaggata 683

                                                                       
Query: 115 aaacatcagatattaaaagtggcatgcttaaaaggtgtaaaggcagctgccgtcgtcgct 174
           |||||||||||||||||  |||||||||||||||||||||||||||||||||||||| ||
Sbjct: 682 aaacatcagatattaaat-tggcatgcttaaaaggtgtaaaggcagctgccgtcgtcact 624

                                                                       
Query: 175 ccttgccgttgggtcgtagttcttggcattttggtcggtgcaaccttccggcacgggcaa 234
           ||| |||||||||||| ||||||||||| | ||||||||||| ||| |||| || |||||
Sbjct: 623 cctcgccgttgggtcgaagttcttggcagtctggtcggtgcatcctgccggtacaggcaa 564

                                                                       
Query: 235 agtaccttgctgtgctcctttacctcctcctatgcagcaagagatggtgggtgtgtatgg 294
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 agtaccttgctgtgcccctttacctcctcctatgcagcaagagatggtgggtgtgtatgg 504

                                                                       
Query: 295 agaattttctaaccgtagaaggaaccagtcttcatcgcatcctggttagcatcacccaga 354
           ||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 503 agaatgttctaaccgtagaaggtaccagtcttcatcgcatcctggttagcatcacccaga 444

                                                                       
Query: 355 gctgcctggctcatgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctgg 414
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 gctgcctggctcatgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctgg 384

                                                                       
Query: 415 acgagcatgtgcccgtactctagcagcttctcgactgtcatctttggctgctcgaaggtc 474
           |||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||
Sbjct: 383 acgagcatgtgcccgtactctagcagcttctccactgtcatctttggctgctcaaaggtc 324

                                                                       
Query: 475 acgggcccgtcccgcgagttcaccagcctcttgccaatgttctcgattccggtagagccg 534
           || || ||||||||||||||||||||| ||||||||||||||||||| |||||||||   
Sbjct: 323 actggtccgtcccgcgagttcaccagcttcttgccaatgttctcgataccggtagaggtc 264

                                       
Query: 535 acccacttgcgcacctcatcgtcgtaca 562
           ||||||||||||||||| ||||||||||
Sbjct: 263 acccacttgcgcacctcgtcgtcgtaca 236
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>gb|BC029790.1| Homo sapiens, clone IMAGE:5192697, mRNA
          Length = 1643

 Score =  753 bits (380), Expect = 0.0
 Identities = 481/512 (93%), Gaps = 7/512 (1%)
 Strand = Plus / Minus

                                                                        
Query: 57   atatattaacaaaacatgcccagcaatcgcttggatgcgatgcgg-acttaggta----- 110
            ||||||||||||||||||||||||||||||||||||||||||||| |||||||||     
Sbjct: 1596 atatattaacaaaacatgcccagcaatcgcttggatgcgatgcggtacttaggtacaaag 1537

                                                                        
Query: 111  ggtaaaacatcagatattaaaagtggcatgcttaaaaggtgtaaaggcagctgccgtcgt 170
            | |||||||||||||||||||  |||||||||||||||||||||||||||||||||||||
Sbjct: 1536 gataaaacatcagatattaaat-tggcatgcttaaaaggtgtaaaggcagctgccgtcgt 1478

                                                                        
Query: 171  cgctccttgccgttgggtcgtagttcttggcattttggtcggtgcaaccttccggcacgg 230
            | ||||| |||||||||||| ||||||||||| | ||||||||||| ||| |||| || |
Sbjct: 1477 cactcctcgccgttgggtcgaagttcttggcagtctggtcggtgcatcctgccggtacag 1418

                                                                        
Query: 231  gcaaagtaccttgctgtgctcctttacctcctcctatgcagcaagagatggtgggtgtgt 290
            ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 1417 gcaaagtaccttgctgtgcccctttacctcctcctatgcagcaagagatggtgggtgtgt 1358

                                                                        
Query: 291  atggagaattttctaaccgtagaaggaaccagtcttcatcgcatcctggttagcatcacc 350
            ||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 1357 atggagaatgttctaaccgtagaaggtaccagtcttcatcgcatcctggttagcatcacc 1298

                                                                        
Query: 351  cagagctgcctggctcatgtaggtgtcagcaagctgcacacgcttgacattgtcctgctc 410
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1297 cagagctgcctggctcatgtaggtgtcagcaagctgcacacgcttgacattgtcctgctc 1238

                                                                        
Query: 411  ctggacgagcatgtgcccgtactctagcagcttctcgactgtcatctttggctgctcgaa 470
            |||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||
Sbjct: 1237 ctggacgagcatgtgcccgtactctagcagcttctccactgtcatctttggctgctcaaa 1178

                                                                        
Query: 471  ggtcacgggcccgtcccgcgagttcaccagcctcttgccaatgttctcgattccggtaga 530
            |||||| || ||||||||||||||||||||| ||||||||||||||||||| ||||||||
Sbjct: 1177 ggtcactggtccgtcccgcgagttcaccagcttcttgccaatgttctcgataccggtaga 1118

                                            
Query: 531  gccgacccacttgcgcacctcatcgtcgtaca 562
            |   ||||||||||||||||| ||||||||||
Sbjct: 1117 ggtcacccacttgcgcacctcgtcgtcgtaca 1086
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>gb|M55449.1|BLYRCABG Hordeum vulgare subsp. vulgare ribulose 1,5-bisphosphate carboxylase
            activase (RcaB) gene, complete cds; and ribulose
            1,5-bisphosphate carboxylase activase  (RcaA) gene,
            alternatively spliced, complete cds
          Length = 8766

 Score =  609 bits (307), Expect = e-171
 Identities = 307/307 (100%)
 Strand = Plus / Minus

                                                                        
Query: 256  acctcctcctatgcagcaagagatggtgggtgtgtatggagaattttctaaccgtagaag 315
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7355 acctcctcctatgcagcaagagatggtgggtgtgtatggagaattttctaaccgtagaag 7296

                                                                        
Query: 316  gaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggctcatgtaggtg 375
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7295 gaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggctcatgtaggtg 7236

                                                                        
Query: 376  tcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgtgcccgtactct 435
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7235 tcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgtgcccgtactct 7176

                                                                        
Query: 436  agcagcttctcgactgtcatctttggctgctcgaaggtcacgggcccgtcccgcgagttc 495
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7175 agcagcttctcgactgtcatctttggctgctcgaaggtcacgggcccgtcccgcgagttc 7116

                                                                        
Query: 496  accagcctcttgccaatgttctcgattccggtagagccgacccacttgcgcacctcatcg 555
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7115 accagcctcttgccaatgttctcgattccggtagagccgacccacttgcgcacctcatcg 7056

                   
Query: 556  tcgtaca 562
            |||||||
Sbjct: 7055 tcgtaca 7049



 Score =  494 bits (249), Expect = e-136
 Identities = 259/261 (99%), Gaps = 1/261 (0%)
 Strand = Plus / Minus

                                                                        
Query: 1    aaatgataagtaggtgtattggtctttgccaa-tgggtatactcaatatatttagagata 59
            |||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||
Sbjct: 7783 aaatgataagtaggtgtattggtctttgccaaatgggtatacacaatatatttagagata 7724

                                                                        
Query: 60   tattaacaaaacatgcccagcaatcgcttggatgcgatgcggacttaggtaggtaaaaca 119
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7723 tattaacaaaacatgcccagcaatcgcttggatgcgatgcggacttaggtaggtaaaaca 7664

                                                                        
Query: 120  tcagatattaaaagtggcatgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttg 179
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7663 tcagatattaaaagtggcatgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttg 7604

                                                                        
Query: 180  ccgttgggtcgtagttcttggcattttggtcggtgcaaccttccggcacgggcaaagtac 239
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7603 ccgttgggtcgtagttcttggcattttggtcggtgcaaccttccggcacgggcaaagtac 7544

                                 
Query: 240  cttgctgtgctcctttacctc 260
            |||||||||||||||||||||
Sbjct: 7543 cttgctgtgctcctttacctc 7523



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 77/89 (86%)
 Strand = Plus / Minus

                                                                        
Query: 382  agctgcacacgcttgacattgtcctgctcctggacgagcatgtgcccgtactctagcagc 441
            ||||||||||||||||| || |||||||||||||| |||||||| |||||||| |  |||
Sbjct: 3961 agctgcacacgcttgacgttctcctgctcctggaccagcatgtggccgtactccatgagc 3902

                                         
Query: 442  ttctcgactgtcatctttggctgctcgaa 470
            ||||| |  |||||||| ||||| |||||
Sbjct: 3901 ttctctatggtcatcttgggctggtcgaa 3873



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 31/32 (96%)
 Strand = Plus / Minus

                                            
Query: 531  gccgacccacttgcgcacctcatcgtcgtaca 562
            ||||||||||||||||||||| ||||||||||
Sbjct: 3812 gccgacccacttgcgcacctcgtcgtcgtaca 3781
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>gb|AY312574.1| Deschampsia antarctica Rubisco activase beta form precursor (RCA2)
            mRNA, complete cds; nuclear gene for chloroplast product
          Length = 1646

 Score =  563 bits (284), Expect = e-157
 Identities = 448/499 (89%), Gaps = 9/499 (1%)
 Strand = Plus / Minus

                                                                        
Query: 71   catgcccagcaatcgcttggatgcgatgcgga-cttaggtag-----gtaaaacatcaga 124
            ||||||||||| ||||||| |||||||||||  ||||||||      || ||||||||||
Sbjct: 1593 catgcccagcagtcgcttgtatgcgatgcggtgcttaggtacaaagagtgaaacatcaga 1534

                                                                        
Query: 125  -tattaaaagtggcatgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgt 183
             || | |||||||||||||||||||||||||||||||||||||||||||||||| || ||
Sbjct: 1533 ataattaaagtggcatgcttaaaaggtgtaaaggcagctgccgtcgtcgctcctcgcggt 1474

                                                                        
Query: 184  tgggtcgtagttcttggcattttggtcggtgcaaccttccggcacgggcaaagtaccttg 243
            ||||||| ||||||||||||   ||||||| |||||||||||||| |||||||| |||||
Sbjct: 1473 tgggtcgaagttcttggcatcccggtcggtacaaccttccggcacaggcaaagtgccttg 1414

                                                                        
Query: 244  ctgtgctcctttacctcctcctatgcagcaagagatggtgggtgtgtatggagaattttc 303
             ||||||||||||||||||||||||||||||||||||||||||||  ||| ||| | |||
Sbjct: 1413 ttgtgctcctttacctcctcctatgcagcaagagatggtgggtgt--atgaagagtgttc 1356

                                                                        
Query: 304  taaccgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctgg 363
            |||||||||||||||||||||||||| ||||||| ||| |||||||||||||||||||||
Sbjct: 1355 taaccgtagaaggaaccagtcttcatggcatccttgttcgcatcacccagagctgcctgg 1296

                                                                        
Query: 364  ctcatgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatg 423
            |||||||| ||||| |||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 1295 ctcatgtaagtgtccgcaagctgcacacgcttgacattgtcctgctcctggacaagcatg 1236

                                                                        
Query: 424  tgcccgtactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggcccg 483
            || |||||||| |||| |||||| || |||||||| |||||||||||||| ||||| |||
Sbjct: 1235 tggccgtactccagcaacttctccaccgtcatcttgggctgctcgaaggtgacgggtccg 1176

                                                                        
Query: 484  tcccgcgagttcaccagcctcttgccaatgttctcgattccggtagagccgacccacttg 543
            |||||||||||||||||||||||||| |||||||| |||||||| ||    |||||||||
Sbjct: 1175 tcccgcgagttcaccagcctcttgccgatgttctcaattccggtggacgacacccacttg 1116

                               
Query: 544  cgcacctcatcgtcgtaca 562
            ||||||||| |||||||||
Sbjct: 1115 cgcacctcaacgtcgtaca 1097
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>gb|M55446.1|BLYRCAA1 Hordeum vulgare rubisco activase (RcaA1) mRNA, 3' end
          Length = 1394

 Score =  509 bits (257), Expect = e-141
 Identities = 257/257 (100%)
 Strand = Plus / Minus

                                                                        
Query: 306  accgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggct 365
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1167 accgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggct 1108

                                                                        
Query: 366  catgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgtg 425
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1107 catgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgtg 1048

                                                                        
Query: 426  cccgtactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggcccgtc 485
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1047 cccgtactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggcccgtc 988

                                                                        
Query: 486  ccgcgagttcaccagcctcttgccaatgttctcgattccggtagagccgacccacttgcg 545
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 987  ccgcgagttcaccagcctcttgccaatgttctcgattccggtagagccgacccacttgcg 928

                             
Query: 546  cacctcatcgtcgtaca 562
            |||||||||||||||||
Sbjct: 927  cacctcatcgtcgtaca 911



 Score =  444 bits (224), Expect = e-121
 Identities = 227/228 (99%)
 Strand = Plus / Minus

                                                                        
Query: 31   aatgggtatactcaatatatttagagatatattaacaaaacatgcccagcaatcgcttgg 90
            ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1392 aatgggtatacacaatatatttagagatatattaacaaaacatgcccagcaatcgcttgg 1333

                                                                        
Query: 91   atgcgatgcggacttaggtaggtaaaacatcagatattaaaagtggcatgcttaaaaggt 150
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1332 atgcgatgcggacttaggtaggtaaaacatcagatattaaaagtggcatgcttaaaaggt 1273

                                                                        
Query: 151  gtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttcttggcattttggtc 210
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1272 gtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttcttggcattttggtc 1213

                                                            
Query: 211  ggtgcaaccttccggcacgggcaaagtaccttgctgtgctcctttacc 258
            ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1212 ggtgcaaccttccggcacgggcaaagtaccttgctgtgctcctttacc 1165
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>emb|AJ635203.1| Triticum durum ssp. durum partial mRNA for putative rubisco
           activase (rba1 gene)
          Length = 321

 Score =  466 bits (235), Expect = e-128
 Identities = 268/279 (96%)
 Strand = Plus / Minus

                                                                       
Query: 284 ggtgtgtatggagaattttctaaccgtagaaggaaccagtcttcatcgcatcctggttag 343
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 ggtgtgtatggagaatgttctaaccgtagaaggaaccagtcttcatcgcatcctggttag 249

                                                                       
Query: 344 catcacccagagctgcctggctcatgtaggtgtcagcaagctgcacacgcttgacattgt 403
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 catcacccagagctgcctggctcatgtaggtgtcagcaagctgcacacgcttgacattgt 189

                                                                       
Query: 404 cctgctcctggacgagcatgtgcccgtactctagcagcttctcgactgtcatctttggct 463
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 cctgctcctggacgagcatgtgcccgtactctagcagcttctcgactgtcatctttggct 129

                                                                       
Query: 464 gctcgaaggtcacgggcccgtcccgcgagttcaccagcctcttgccaatgttctcgattc 523
           |||| |||||||| || ||||||||||||||||| ||| ||||||||||||||||||| |
Sbjct: 128 gctcaaaggtcactggtccgtcccgcgagttcacaagcttcttgccaatgttctcgatac 69

                                                  
Query: 524 cggtagagccgacccacttgcgcacctcatcgtcgtaca 562
           ||||||||   ||||||||||||||||| ||||||||||
Sbjct: 68  cggtagaggtcacccacttgcgcacctcgtcgtcgtaca 30
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>gb|AY312573.1| Deschampsia antarctica Rubisco activase alpha form precursor (RCA1)
            mRNA, complete cds; nuclear gene for chloroplast product
          Length = 1616

 Score =  335 bits (169), Expect = 9e-89
 Identities = 235/257 (91%)
 Strand = Plus / Minus

                                                                        
Query: 306  accgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggct 365
            |||||||||||||||||||||||| ||||||| ||| |||||||||||||||||||||||
Sbjct: 1363 accgtagaaggaaccagtcttcatggcatccttgttcgcatcacccagagctgcctggct 1304

                                                                        
Query: 366  catgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgtg 425
            |||||| ||||| |||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 1303 catgtaagtgtccgcaagctgcacacgcttgacattgtcctgctcctggacaagcatgtg 1244

                                                                        
Query: 426  cccgtactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggcccgtc 485
             |||||||| |||| |||||| || |||||||| |||||||||||||| ||||| |||||
Sbjct: 1243 gccgtactccagcaacttctccaccgtcatcttgggctgctcgaaggtgacgggtccgtc 1184

                                                                        
Query: 486  ccgcgagttcaccagcctcttgccaatgttctcgattccggtagagccgacccacttgcg 545
            |||||||||||||||||||||||| |||||||| |||||||| ||    |||||||||||
Sbjct: 1183 ccgcgagttcaccagcctcttgccgatgttctcaattccggtggacgacacccacttgcg 1124

                             
Query: 546  cacctcatcgtcgtaca 562
            |||||| ||||||||||
Sbjct: 1123 cacctcgtcgtcgtaca 1107



 Score =  176 bits (89), Expect = 5e-41
 Identities = 119/129 (92%)
 Strand = Plus / Minus

                                                                        
Query: 130  aaagtggcatgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtc 189
            |||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct: 1489 aaagtggcatgcttaaaaggtgtaaaggcagctgccgtcgtcgctcctcgcggttgggtc 1430

                                                                        
Query: 190  gtagttcttggcattttggtcggtgcaaccttccggcacgggcaaagtaccttgctgtgc 249
            | ||||||||||||   ||||||| |||||||||||||| |||||||| ||||| |||||
Sbjct: 1429 gaagttcttggcatcccggtcggtacaaccttccggcacaggcaaagtgccttgttgtgc 1370

                     
Query: 250  tcctttacc 258
            |||||||||
Sbjct: 1369 tcctttacc 1361
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>dbj|AK104332.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-032-F04, full
            insert sequence
          Length = 1682

 Score =  135 bits (68), Expect = 2e-28
 Identities = 115/130 (88%), Gaps = 3/130 (2%)
 Strand = Plus / Minus

                                                                        
Query: 139  tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 198
            ||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 1514 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctcctcgccgttgggtcgaagttctt 1455

                                                                        
Query: 199  ggcattttggtcggtgcaaccttccggcacgggcaaagtac---cttgctgtgctccttt 255
            ||||    |||||||||||||||||||||| ||||   |||   ||||||||||||||| 
Sbjct: 1454 ggcaacagggtcggtgcaaccttccggcacaggcaggttacctgcttgctgtgctccttg 1395

                      
Query: 256  acctcctcct 265
             |||||||||
Sbjct: 1394 ccctcctcct 1385



 Score =  123 bits (62), Expect = 7e-25
 Identities = 176/214 (82%)
 Strand = Plus / Minus

                                                                        
Query: 305  aaccgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggc 364
            ||||||||||||||||||||||||| || ||   |||||| ||||| ||||| |||| ||
Sbjct: 1310 aaccgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcctcgc 1251

                                                                        
Query: 365  tcatgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgt 424
            ||| |||    ||||| ||||||||||||||||| || ||||||||||  || |||||||
Sbjct: 1250 tcaagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagcatgt 1191

                                                                        
Query: 425  gcccgtactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggcccgt 484
              |||||||| |  ||||| ||||  |||||||| |||||||||||   |   || || |
Sbjct: 1190 atccgtactccatgagcttttcgatcgtcatcttgggctgctcgaactccggtgggccct 1131

                                              
Query: 485  cccgcgagttcaccagcctcttgccaatgttctc 518
            ||| ||||||||||||||||||||||||||||||
Sbjct: 1130 ccctcgagttcaccagcctcttgccaatgttctc 1097



 Score = 44.1 bits (22), Expect = 0.49
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 535  acccacttgcgcacctcatcgtcgta 560
            ||||||||||||||||| ||||||||
Sbjct: 1080 acccacttgcgcacctcgtcgtcgta 1055
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>dbj|AK064986.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001C24, full
            insert sequence
          Length = 1680

 Score =  135 bits (68), Expect = 2e-28
 Identities = 115/130 (88%), Gaps = 3/130 (2%)
 Strand = Plus / Minus

                                                                        
Query: 139  tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 198
            ||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 1552 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctcctcgccgttgggtcgaagttctt 1493

                                                                        
Query: 199  ggcattttggtcggtgcaaccttccggcacgggcaaagtac---cttgctgtgctccttt 255
            ||||    |||||||||||||||||||||| ||||   |||   ||||||||||||||| 
Sbjct: 1492 ggcaacagggtcggtgcaaccttccggcacaggcaggttacctgcttgctgtgctccttg 1433

                      
Query: 256  acctcctcct 265
             |||||||||
Sbjct: 1432 ccctcctcct 1423



 Score =  123 bits (62), Expect = 7e-25
 Identities = 176/214 (82%)
 Strand = Plus / Minus

                                                                        
Query: 305  aaccgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggc 364
            ||||||||||||||||||||||||| || ||   |||||| ||||| ||||| |||| ||
Sbjct: 1348 aaccgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcctcgc 1289

                                                                        
Query: 365  tcatgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgt 424
            ||| |||    ||||| ||||||||||||||||| || ||||||||||  || |||||||
Sbjct: 1288 tcaagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagcatgt 1229

                                                                        
Query: 425  gcccgtactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggcccgt 484
              |||||||| |  ||||| ||||  |||||||| |||||||||||   |   || || |
Sbjct: 1228 atccgtactccatgagcttttcgatcgtcatcttgggctgctcgaactccggtgggccct 1169

                                              
Query: 485  cccgcgagttcaccagcctcttgccaatgttctc 518
            ||| ||||||||||||||||||||||||||||||
Sbjct: 1168 ccctcgagttcaccagcctcttgccaatgttctc 1135



 Score = 44.1 bits (22), Expect = 0.49
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 535  acccacttgcgcacctcatcgtcgta 560
            ||||||||||||||||| ||||||||
Sbjct: 1118 acccacttgcgcacctcgtcgtcgta 1093
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>dbj|AK060847.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-E04, full
            insert sequence
          Length = 1691

 Score =  135 bits (68), Expect = 2e-28
 Identities = 115/130 (88%), Gaps = 3/130 (2%)
 Strand = Plus / Minus

                                                                        
Query: 139  tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 198
            ||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 1551 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctcctcgccgttgggtcgaagttctt 1492

                                                                        
Query: 199  ggcattttggtcggtgcaaccttccggcacgggcaaagtac---cttgctgtgctccttt 255
            ||||    |||||||||||||||||||||| ||||   |||   ||||||||||||||| 
Sbjct: 1491 ggcaacagggtcggtgcaaccttccggcacaggcaggttacctgcttgctgtgctccttg 1432

                      
Query: 256  acctcctcct 265
             |||||||||
Sbjct: 1431 ccctcctcct 1422



 Score =  123 bits (62), Expect = 7e-25
 Identities = 176/214 (82%)
 Strand = Plus / Minus

                                                                        
Query: 305  aaccgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggc 364
            ||||||||||||||||||||||||| || ||   |||||| ||||| ||||| |||| ||
Sbjct: 1347 aaccgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcctcgc 1288

                                                                        
Query: 365  tcatgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgt 424
            ||| |||    ||||| ||||||||||||||||| || ||||||||||  || |||||||
Sbjct: 1287 tcaagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagcatgt 1228

                                                                        
Query: 425  gcccgtactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggcccgt 484
              |||||||| |  ||||| ||||  |||||||| |||||||||||   |   || || |
Sbjct: 1227 atccgtactccatgagcttttcgatcgtcatcttgggctgctcgaactccggtgggccct 1168

                                              
Query: 485  cccgcgagttcaccagcctcttgccaatgttctc 518
            ||| ||||||||||||||||||||||||||||||
Sbjct: 1167 ccctcgagttcaccagcctcttgccaatgttctc 1134



 Score = 44.1 bits (22), Expect = 0.49
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 535  acccacttgcgcacctcatcgtcgta 560
            ||||||||||||||||| ||||||||
Sbjct: 1117 acccacttgcgcacctcgtcgtcgta 1092
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>dbj|AK060841.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-D05, full
            insert sequence
          Length = 1470

 Score =  135 bits (68), Expect = 2e-28
 Identities = 115/130 (88%), Gaps = 3/130 (2%)
 Strand = Plus / Minus

                                                                        
Query: 139  tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 198
            ||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 1335 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctcctcgccgttgggtcgaagttctt 1276

                                                                        
Query: 199  ggcattttggtcggtgcaaccttccggcacgggcaaagtac---cttgctgtgctccttt 255
            ||||    |||||||||||||||||||||| ||||   |||   ||||||||||||||| 
Sbjct: 1275 ggcaacagggtcggtgcaaccttccggcacaggcaggttacctgcttgctgtgctccttg 1216

                      
Query: 256  acctcctcct 265
             |||||||||
Sbjct: 1215 ccctcctcct 1206



 Score =  123 bits (62), Expect = 7e-25
 Identities = 176/214 (82%)
 Strand = Plus / Minus

                                                                        
Query: 305  aaccgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggc 364
            ||||||||||||||||||||||||| || ||   |||||| ||||| ||||| |||| ||
Sbjct: 1131 aaccgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcctcgc 1072

                                                                        
Query: 365  tcatgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgt 424
            ||| |||    ||||| ||||||||||||||||| || ||||||||||  || |||||||
Sbjct: 1071 tcaagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagcatgt 1012

                                                                        
Query: 425  gcccgtactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggcccgt 484
              |||||||| |  ||||| ||||  |||||||| |||||||||||   |   || || |
Sbjct: 1011 atccgtactccatgagcttttcgatcgtcatcttgggctgctcgaactccggtgggccct 952

                                              
Query: 485  cccgcgagttcaccagcctcttgccaatgttctc 518
            ||| ||||||||||||||||||||||||||||||
Sbjct: 951  ccctcgagttcaccagcctcttgccaatgttctc 918



 Score = 44.1 bits (22), Expect = 0.49
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 535 acccacttgcgcacctcatcgtcgta 560
           ||||||||||||||||| ||||||||
Sbjct: 901 acccacttgcgcacctcgtcgtcgta 876
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>dbj|AB034748.1| Oryza sativa OsrcaA2 mRNA for RuBisCO activase small isoform
            precursor, complete cds
          Length = 1706

 Score =  135 bits (68), Expect = 2e-28
 Identities = 115/130 (88%), Gaps = 3/130 (2%)
 Strand = Plus / Minus

                                                                        
Query: 139  tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 198
            ||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 1556 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctcctcgccgttgggtcgaagttctt 1497

                                                                        
Query: 199  ggcattttggtcggtgcaaccttccggcacgggcaaagtac---cttgctgtgctccttt 255
            ||||    |||||||||||||||||||||| ||||   |||   ||||||||||||||| 
Sbjct: 1496 ggcaacagggtcggtgcaaccttccggcacaggcaggttacctgcttgctgtgctccttg 1437

                      
Query: 256  acctcctcct 265
             |||||||||
Sbjct: 1436 ccctcctcct 1427



 Score =  123 bits (62), Expect = 7e-25
 Identities = 176/214 (82%)
 Strand = Plus / Minus

                                                                        
Query: 305  aaccgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggc 364
            ||||||||||||||||||||||||| || ||   |||||| ||||| ||||| |||| ||
Sbjct: 1352 aaccgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcctcgc 1293

                                                                        
Query: 365  tcatgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgt 424
            ||| |||    ||||| ||||||||||||||||| || ||||||||||  || |||||||
Sbjct: 1292 tcaagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagcatgt 1233

                                                                        
Query: 425  gcccgtactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggcccgt 484
              |||||||| |  ||||| ||||  |||||||| |||||||||||   |   || || |
Sbjct: 1232 atccgtactccatgagcttttcgatcgtcatcttgggctgctcgaactccggtgggccct 1173

                                              
Query: 485  cccgcgagttcaccagcctcttgccaatgttctc 518
            ||| ||||||||||||||||||||||||||||||
Sbjct: 1172 ccctcgagttcaccagcctcttgccaatgttctc 1139



 Score = 44.1 bits (22), Expect = 0.49
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 535  acccacttgcgcacctcatcgtcgta 560
            ||||||||||||||||| ||||||||
Sbjct: 1122 acccacttgcgcacctcgtcgtcgta 1097
to top
>gb|AC137064.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0003C04
              map S10003, complete sequence
          Length = 119238

 Score =  133 bits (67), Expect = 7e-28
 Identities = 88/95 (92%)
 Strand = Plus / Plus

                                                                          
Query: 139    tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 198
              ||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 107158 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctcctcgccgttgggtcgaagttctt 107217

                                                 
Query: 199    ggcattttggtcggtgcaaccttccggcacgggca 233
              ||||    |||||||||||||||||||||| ||||
Sbjct: 107218 ggcaacagggtcggtgcaaccttccggcacaggca 107252



 Score =  129 bits (65), Expect = 1e-26
 Identities = 179/217 (82%)
 Strand = Plus / Plus

                                                                          
Query: 302    tctaaccgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcct 361
              |||||||||||||||||||||||||||| || ||   |||||| ||||| ||||| ||||
Sbjct: 108306 tctaaccgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcct 108365

                                                                          
Query: 362    ggctcatgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagca 421
               ||||| |||    ||||| ||||||||||||||||| || ||||||||||  || ||||
Sbjct: 108366 cgctcaagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagca 108425

                                                                          
Query: 422    tgtgcccgtactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggcc 481
              |||  |||||||| |  ||||| ||||  |||||||| |||||||||||   |   || |
Sbjct: 108426 tgtatccgtactccatgagcttttcgatcgtcatcttgggctgctcgaactccggtgggc 108485

                                                   
Query: 482    cgtcccgcgagttcaccagcctcttgccaatgttctc 518
              | |||| ||||||||||||||||||||||||||||||
Sbjct: 108486 cctccctcgagttcaccagcctcttgccaatgttctc 108522



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 63/75 (84%)
 Strand = Plus / Plus

                                                                          
Query: 157    gcagctgccgtcgtcgctccttgccgttgggtcgtagttcttggcattttggtcggtgca 216
              ||||||||||||||||||||| || || |||||||||||   |||   ||||||||||||
Sbjct: 112053 gcagctgccgtcgtcgctcctggcggtagggtcgtagttggcggcgcgttggtcggtgca 112112

                             
Query: 217    accttccggcacggg 231
               ||  ||||||||||
Sbjct: 112113 tcccgccggcacggg 112127



 Score = 44.1 bits (22), Expect = 0.49
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 535    acccacttgcgcacctcatcgtcgta 560
              ||||||||||||||||| ||||||||
Sbjct: 108539 acccacttgcgcacctcgtcgtcgta 108564



 Score = 42.1 bits (21), Expect = 1.9
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 490    gagttcaccagcctcttgccaatgttctc 518
              ||||||||||||||| |||| ||||||||
Sbjct: 112324 gagttcaccagcctcctgccgatgttctc 112352
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>gb|AC133008.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBb0026K20 map S10559, complete sequence
          Length = 115996

 Score =  133 bits (67), Expect = 7e-28
 Identities = 88/95 (92%)
 Strand = Plus / Plus

                                                                         
Query: 139   tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 198
             ||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 29039 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctcctcgccgttgggtcgaagttctt 29098

                                                
Query: 199   ggcattttggtcggtgcaaccttccggcacgggca 233
             ||||    |||||||||||||||||||||| ||||
Sbjct: 29099 ggcaacagggtcggtgcaaccttccggcacaggca 29133



 Score =  129 bits (65), Expect = 1e-26
 Identities = 179/217 (82%)
 Strand = Plus / Plus

                                                                         
Query: 302   tctaaccgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcct 361
             |||||||||||||||||||||||||||| || ||   |||||| ||||| ||||| ||||
Sbjct: 30183 tctaaccgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcct 30242

                                                                         
Query: 362   ggctcatgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagca 421
              ||||| |||    ||||| ||||||||||||||||| || ||||||||||  || ||||
Sbjct: 30243 cgctcaagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagca 30302

                                                                         
Query: 422   tgtgcccgtactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggcc 481
             |||  |||||||| |  ||||| ||||  |||||||| |||||||||||   |   || |
Sbjct: 30303 tgtatccgtactccatgagcttttcgatcgtcatcttgggctgctcgaactccggtgggc 30362

                                                  
Query: 482   cgtcccgcgagttcaccagcctcttgccaatgttctc 518
             | |||| ||||||||||||||||||||||||||||||
Sbjct: 30363 cctccctcgagttcaccagcctcttgccaatgttctc 30399



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 63/75 (84%)
 Strand = Plus / Plus

                                                                         
Query: 157   gcagctgccgtcgtcgctccttgccgttgggtcgtagttcttggcattttggtcggtgca 216
             ||||||||||||||||||||| || || |||||||||||   |||   ||||||||||||
Sbjct: 33930 gcagctgccgtcgtcgctcctggcggtagggtcgtagttggcggcgcgttggtcggtgca 33989

                            
Query: 217   accttccggcacggg 231
              ||  ||||||||||
Sbjct: 33990 tcccgccggcacggg 34004



 Score = 44.1 bits (22), Expect = 0.49
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 535   acccacttgcgcacctcatcgtcgta 560
             ||||||||||||||||| ||||||||
Sbjct: 30416 acccacttgcgcacctcgtcgtcgta 30441



 Score = 42.1 bits (21), Expect = 1.9
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 490   gagttcaccagcctcttgccaatgttctc 518
             ||||||||||||||| |||| ||||||||
Sbjct: 34201 gagttcaccagcctcctgccgatgttctc 34229
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>gb|U74321.1|OSU74321 Oryza sativa ribulose-1,5-bisphosphate carboxylase/oxygenase activase
            (rca) mRNA, complete cds
          Length = 1675

 Score =  133 bits (67), Expect = 7e-28
 Identities = 88/95 (92%)
 Strand = Plus / Minus

                                                                        
Query: 139  tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 198
            ||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 1520 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctcctcgccgttgggtcgaagttctt 1461

                                               
Query: 199  ggcattttggtcggtgcaaccttccggcacgggca 233
            ||||    |||||||||||||||||||||| ||||
Sbjct: 1460 ggcaacagggtcggtgcaaccttccggcacaggca 1426



 Score =  123 bits (62), Expect = 7e-25
 Identities = 176/214 (82%)
 Strand = Plus / Minus

                                                                        
Query: 305  aaccgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggc 364
            ||||||||||||||||||||||||| || ||   |||||| ||||| ||||| |||| ||
Sbjct: 1316 aaccgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcctcgc 1257

                                                                        
Query: 365  tcatgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgt 424
            ||| |||    ||||| ||||||||||||||||| || ||||||||||  || |||||||
Sbjct: 1256 tcaagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagcatgt 1197

                                                                        
Query: 425  gcccgtactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggcccgt 484
              |||||||| |  ||||| ||||  |||||||| |||||||||||   |   || || |
Sbjct: 1196 atccgtactcgatgagcttttcgatcgtcatcttgggctgctcgaactccggtgggccct 1137

                                              
Query: 485  cccgcgagttcaccagcctcttgccaatgttctc 518
            ||| ||||||||||||||||||||||||||||||
Sbjct: 1136 ccctcgagttcaccagcctcttgccaatgttctc 1103



 Score = 44.1 bits (22), Expect = 0.49
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 535  acccacttgcgcacctcatcgtcgta 560
            ||||||||||||||||| ||||||||
Sbjct: 1086 acccacttgcgcacctcgtcgtcgta 1061
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>dbj|AB110180.1| Oryza sativa (japonica cultivar-group) mRNA for ribulose-bisphosphate
            carboxylase activase large isoform precursor protein,
            complete cds, clone: 13YPR038
          Length = 1558

 Score =  133 bits (67), Expect = 7e-28
 Identities = 88/95 (92%)
 Strand = Plus / Minus

                                                                        
Query: 139  tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 198
            ||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 1430 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctcctcgccgttgggtcgaagttctt 1371

                                               
Query: 199  ggcattttggtcggtgcaaccttccggcacgggca 233
            ||||    |||||||||||||||||||||| ||||
Sbjct: 1370 ggcaacagggtcggtgcaaccttccggcacaggca 1336



 Score =  119 bits (60), Expect = 1e-23
 Identities = 174/212 (82%)
 Strand = Plus / Minus

                                                                        
Query: 307  ccgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggctc 366
            ||||||||||||||||||||||| || ||   |||||| ||||| ||||| |||| ||||
Sbjct: 1309 ccgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcctcgctc 1250

                                                                        
Query: 367  atgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgtgc 426
            | |||    ||||| ||||||||||||||||| || ||||||||||  || |||||||  
Sbjct: 1249 aagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagcatgtat 1190

                                                                        
Query: 427  ccgtactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggcccgtcc 486
            |||||||| |  ||||| ||||  |||||||| |||||||||||   |   || || |||
Sbjct: 1189 ccgtactccatgagcttttcgatcgtcatcttgggctgctcgaactccggtgggccctcc 1130

                                            
Query: 487  cgcgagttcaccagcctcttgccaatgttctc 518
            | ||||||||||||||||||||||||||||||
Sbjct: 1129 ctcgagttcaccagcctcttgccaatgttctc 1098



 Score = 44.1 bits (22), Expect = 0.49
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 535  acccacttgcgcacctcatcgtcgta 560
            ||||||||||||||||| ||||||||
Sbjct: 1081 acccacttgcgcacctcgtcgtcgta 1056
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score =  133 bits (67), Expect = 7e-28
 Identities = 88/95 (92%)
 Strand = Plus / Plus

                                                                            
Query: 139      tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 198
                ||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 28302301 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctcctcgccgttgggtcgaagttctt 28302360

                                                   
Query: 199      ggcattttggtcggtgcaaccttccggcacgggca 233
                ||||    |||||||||||||||||||||| ||||
Sbjct: 28302361 ggcaacagggtcggtgcaaccttccggcacaggca 28302395



 Score =  129 bits (65), Expect = 1e-26
 Identities = 179/217 (82%)
 Strand = Plus / Plus

                                                                            
Query: 302      tctaaccgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcct 361
                |||||||||||||||||||||||||||| || ||   |||||| ||||| ||||| ||||
Sbjct: 28303445 tctaaccgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcct 28303504

                                                                            
Query: 362      ggctcatgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagca 421
                 ||||| |||    ||||| ||||||||||||||||| || ||||||||||  || ||||
Sbjct: 28303505 cgctcaagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagca 28303564

                                                                            
Query: 422      tgtgcccgtactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggcc 481
                |||  |||||||| |  ||||| ||||  |||||||| |||||||||||   |   || |
Sbjct: 28303565 tgtatccgtactccatgagcttttcgatcgtcatcttgggctgctcgaactccggtgggc 28303624

                                                     
Query: 482      cgtcccgcgagttcaccagcctcttgccaatgttctc 518
                | |||| ||||||||||||||||||||||||||||||
Sbjct: 28303625 cctccctcgagttcaccagcctcttgccaatgttctc 28303661



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 63/75 (84%)
 Strand = Plus / Plus

                                                                            
Query: 157      gcagctgccgtcgtcgctccttgccgttgggtcgtagttcttggcattttggtcggtgca 216
                ||||||||||||||||||||| || || |||||||||||   |||   ||||||||||||
Sbjct: 28307192 gcagctgccgtcgtcgctcctggcggtagggtcgtagttggcggcgcgttggtcggtgca 28307251

                               
Query: 217      accttccggcacggg 231
                 ||  ||||||||||
Sbjct: 28307252 tcccgccggcacggg 28307266



 Score = 44.1 bits (22), Expect = 0.49
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                          
Query: 535      acccacttgcgcacctcatcgtcgta 560
                ||||||||||||||||| ||||||||
Sbjct: 28303678 acccacttgcgcacctcgtcgtcgta 28303703



 Score = 42.1 bits (21), Expect = 1.9
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                             
Query: 490      gagttcaccagcctcttgccaatgttctc 518
                ||||||||||||||| |||| ||||||||
Sbjct: 28307463 gagttcaccagcctcctgccgatgttctc 28307491
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score =  133 bits (67), Expect = 7e-28
 Identities = 88/95 (92%)
 Strand = Plus / Plus

                                                                            
Query: 139      tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 198
                ||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 28284750 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctcctcgccgttgggtcgaagttctt 28284809

                                                   
Query: 199      ggcattttggtcggtgcaaccttccggcacgggca 233
                ||||    |||||||||||||||||||||| ||||
Sbjct: 28284810 ggcaacagggtcggtgcaaccttccggcacaggca 28284844



 Score =  129 bits (65), Expect = 1e-26
 Identities = 179/217 (82%)
 Strand = Plus / Plus

                                                                            
Query: 302      tctaaccgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcct 361
                |||||||||||||||||||||||||||| || ||   |||||| ||||| ||||| ||||
Sbjct: 28285894 tctaaccgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcct 28285953

                                                                            
Query: 362      ggctcatgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagca 421
                 ||||| |||    ||||| ||||||||||||||||| || ||||||||||  || ||||
Sbjct: 28285954 cgctcaagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagca 28286013

                                                                            
Query: 422      tgtgcccgtactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggcc 481
                |||  |||||||| |  ||||| ||||  |||||||| |||||||||||   |   || |
Sbjct: 28286014 tgtatccgtactccatgagcttttcgatcgtcatcttgggctgctcgaactccggtgggc 28286073

                                                     
Query: 482      cgtcccgcgagttcaccagcctcttgccaatgttctc 518
                | |||| ||||||||||||||||||||||||||||||
Sbjct: 28286074 cctccctcgagttcaccagcctcttgccaatgttctc 28286110



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 63/75 (84%)
 Strand = Plus / Plus

                                                                            
Query: 157      gcagctgccgtcgtcgctccttgccgttgggtcgtagttcttggcattttggtcggtgca 216
                ||||||||||||||||||||| || || |||||||||||   |||   ||||||||||||
Sbjct: 28289641 gcagctgccgtcgtcgctcctggcggtagggtcgtagttggcggcgcgttggtcggtgca 28289700

                               
Query: 217      accttccggcacggg 231
                 ||  ||||||||||
Sbjct: 28289701 tcccgccggcacggg 28289715



 Score = 44.1 bits (22), Expect = 0.49
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                          
Query: 535      acccacttgcgcacctcatcgtcgta 560
                ||||||||||||||||| ||||||||
Sbjct: 28286127 acccacttgcgcacctcgtcgtcgta 28286152



 Score = 42.1 bits (21), Expect = 1.9
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                             
Query: 490      gagttcaccagcctcttgccaatgttctc 518
                ||||||||||||||| |||| ||||||||
Sbjct: 28289912 gagttcaccagcctcctgccgatgttctc 28289940
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>dbj|AB034698.1| Oryza sativa OsrcaA1 mRNA for RuBisCO activase large isoform
            precursor, complete cds
          Length = 1623

 Score =  133 bits (67), Expect = 7e-28
 Identities = 88/95 (92%)
 Strand = Plus / Minus

                                                                        
Query: 139  tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 198
            ||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 1465 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctcctcgccgttgggtcgaagttctt 1406

                                               
Query: 199  ggcattttggtcggtgcaaccttccggcacgggca 233
            ||||    |||||||||||||||||||||| ||||
Sbjct: 1405 ggcaacagggtcggtgcaaccttccggcacaggca 1371



 Score =  119 bits (60), Expect = 1e-23
 Identities = 174/212 (82%)
 Strand = Plus / Minus

                                                                        
Query: 307  ccgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggctc 366
            ||||||||||||||||||||||| || ||   |||||| ||||| ||||| |||| ||||
Sbjct: 1344 ccgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcctcgctc 1285

                                                                        
Query: 367  atgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgtgc 426
            | |||    ||||| ||||||||||||||||| || ||||||||||  || |||||||  
Sbjct: 1284 aagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagcatgtat 1225

                                                                        
Query: 427  ccgtactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggcccgtcc 486
            |||||||| |  ||||| ||||  |||||||| |||||||||||   |   || || |||
Sbjct: 1224 ccgtactccatgagcttttcgatcgtcatcttgggctgctcgaactccggtgggccctcc 1165

                                            
Query: 487  cgcgagttcaccagcctcttgccaatgttctc 518
            | ||||||||||||||||||||||||||||||
Sbjct: 1164 ctcgagttcaccagcctcttgccaatgttctc 1133



 Score = 44.1 bits (22), Expect = 0.49
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 535  acccacttgcgcacctcatcgtcgta 560
            ||||||||||||||||| ||||||||
Sbjct: 1116 acccacttgcgcacctcgtcgtcgta 1091
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>gb|AF338238.1|AF338238 Zantedeschia aethiopica rubisco activase (rca2) mRNA, partial cds
          Length = 1436

 Score =  125 bits (63), Expect = 2e-25
 Identities = 171/207 (82%)
 Strand = Plus / Minus

                                                                        
Query: 303  ctaaccgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctg 362
            |||||| |||||||| |||||||| ||||| ||||| || || ||||| |||||||||| 
Sbjct: 1007 ctaaccatagaaggatccagtcttgatcgcgtcctgattggcgtcaccaagagctgcctc 948

                                                                        
Query: 363  gctcatgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcat 422
            ||||| |||  |||| || |||||||| | ||| || || ||||||||||| || |||||
Sbjct: 947  gctcaggtacttgtcggccagctgcaccctcttcacgttctcctgctcctgcaccagcat 888

                                                                        
Query: 423  gtgcccgtactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggccc 482
            ||  |||||||| |||||||| || |  |||||||| |||||| |||| |||   |||||
Sbjct: 887  gttgccgtactccagcagcttgtccagggtcatcttgggctgcgcgaacgtcggcggccc 828

                                       
Query: 483  gtcccgcgagttcaccagcctcttgcc 509
             ||| ||||||||||||||||||||||
Sbjct: 827  ctccagcgagttcaccagcctcttgcc 801



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 64/74 (86%)
 Strand = Plus / Minus

                                                                        
Query: 149  gtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttcttggcattttgg 208
            ||||| ||||||||||| ||||||||||| ||||| |||||| ||||  |||||||  ||
Sbjct: 1149 gtgtacaggcagctgccatcgtcgctcctggccgtcgggtcgaagttggtggcattccgg 1090

                          
Query: 209  tcggtgcaaccttc 222
            ||||| ||||||||
Sbjct: 1089 tcggtacaaccttc 1076
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>gb|AF349638.1|AF349638 Oryza sativa ribulose-1,5-bisphosphate carboxylase activase mRNA,
           partial cds; nuclear gene for chloroplast product
          Length = 651

 Score =  123 bits (62), Expect = 7e-25
 Identities = 176/214 (82%)
 Strand = Plus / Minus

                                                                       
Query: 305 aaccgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggc 364
           ||||||||||||||||||||||||| || ||   |||||| ||||| ||||| |||| ||
Sbjct: 565 aaccgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcctcgc 506

                                                                       
Query: 365 tcatgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgt 424
           ||| |||    ||||| ||||||||||||||||| || ||||||||||  || |||||||
Sbjct: 505 tcaagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagcatgt 446

                                                                       
Query: 425 gcccgtactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggcccgt 484
             |||||||| |  ||||| ||||  |||||||| |||||||||||   |   || || |
Sbjct: 445 atccgtactcgatgagcttttcgatcgtcatcttgggctgctcgaactccggtgggccct 386

                                             
Query: 485 cccgcgagttcaccagcctcttgccaatgttctc 518
           ||| ||||||||||||||||||||||||||||||
Sbjct: 385 ccctcgagttcaccagcctcttgccaatgttctc 352



 Score = 44.1 bits (22), Expect = 0.49
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 535 acccacttgcgcacctcatcgtcgta 560
           ||||||||||||||||| ||||||||
Sbjct: 335 acccacttgcgcacctcgtcgtcgta 310
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>dbj|AK119513.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-200-F01, full
            insert sequence
          Length = 1721

 Score =  123 bits (62), Expect = 7e-25
 Identities = 176/214 (82%)
 Strand = Plus / Minus

                                                                        
Query: 305  aaccgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggc 364
            ||||||||||||||||||||||||| || ||   |||||| ||||| ||||| |||| ||
Sbjct: 1359 aaccgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcctcgc 1300

                                                                        
Query: 365  tcatgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgt 424
            ||| |||    ||||| ||||||||||||||||| || ||||||||||  || |||||||
Sbjct: 1299 tcaagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagcatgt 1240

                                                                        
Query: 425  gcccgtactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggcccgt 484
              |||||||| |  ||||| ||||  |||||||| |||||||||||   |   || || |
Sbjct: 1239 atccgtactccatgagcttttcgatcgtcatcttgggctgctcgaactccggtgggccct 1180

                                              
Query: 485  cccgcgagttcaccagcctcttgccaatgttctc 518
            ||| ||||||||||||||||||||||||||||||
Sbjct: 1179 ccctcgagttcaccagcctcttgccaatgttctc 1146



 Score =  119 bits (60), Expect = 1e-23
 Identities = 114/130 (87%), Gaps = 4/130 (3%)
 Strand = Plus / Minus

                                                                        
Query: 139  tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 198
            ||||||||||||||||||||||||||||||||||||||| |||||||||||| | |||||
Sbjct: 1562 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctcctcgccgttgggtcg-aattctt 1504

                                                                        
Query: 199  ggcattttggtcggtgcaaccttccggcacgggcaaagtac---cttgctgtgctccttt 255
            ||||    |||||||||||||||||||||| ||||   |||   ||||||||||||||| 
Sbjct: 1503 ggcaacagggtcggtgcaaccttccggcacaggcaggttacctgcttgctgtgctccttg 1444

                      
Query: 256  acctcctcct 265
             |||||||||
Sbjct: 1443 ccctcctcct 1434



 Score = 44.1 bits (22), Expect = 0.49
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 535  acccacttgcgcacctcatcgtcgta 560
            ||||||||||||||||| ||||||||
Sbjct: 1129 acccacttgcgcacctcgtcgtcgta 1104
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>gb|DQ359157.1| Oryza sativa (japonica cultivar-group) chloroplast RuBisCO small
           isoform precursor, mRNA, partial cds; nuclear gene for
           chloroplast product
          Length = 93

 Score =  121 bits (61), Expect = 3e-24
 Identities = 82/89 (92%)
 Strand = Plus / Minus

                                                                       
Query: 145 aaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttcttggcatt 204
           ||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||  
Sbjct: 93  aaaggtgtaaaggcagctgccgtcgtcgctcctcgccgttgggtcgaagttcttggcaac 34

                                        
Query: 205 ttggtcggtgcaaccttccggcacgggca 233
             |||||||||||||||||||||| ||||
Sbjct: 33  agggtcggtgcaaccttccggcacaggca 5
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>gb|AF338237.1|AF338237 Zantedeschia aethiopica rubisco activase (rca1) mRNA, partial cds
          Length = 1597

 Score =  119 bits (60), Expect = 1e-23
 Identities = 165/200 (82%)
 Strand = Plus / Minus

                                                                        
Query: 310  tagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggctcatg 369
            |||||||| |||||||| ||||| ||||| || || ||||| |||||||||| ||||| |
Sbjct: 1194 tagaaggatccagtcttgatcgcgtcctgattggcgtcaccaagagctgcctcgctcagg 1135

                                                                        
Query: 370  taggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgtgcccg 429
            ||  |||| || |||||||| | ||| || || ||||||||||| || |||||||  |||
Sbjct: 1134 tacttgtcggccagctgcaccctcttcacgttctcctgctcctgcaccagcatgttgccg 1075

                                                                        
Query: 430  tactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggcccgtcccgc 489
            ||||| |||||||| || |  |||||||| |||||| |||| |||   ||||| ||| ||
Sbjct: 1074 tactccagcagcttgtccagggtcatcttgggctgcgcgaacgtcggcggcccctccagc 1015

                                
Query: 490  gagttcaccagcctcttgcc 509
            ||||||||||||||||||||
Sbjct: 1014 gagttcaccagcctcttgcc 995



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 64/74 (86%)
 Strand = Plus / Minus

                                                                        
Query: 149  gtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttcttggcattttgg 208
            ||||| ||||||||||| ||||||||||| ||||| |||||| ||||  |||||||  ||
Sbjct: 1305 gtgtacaggcagctgccatcgtcgctcctggccgtcgggtcgaagttggtggcattccgg 1246

                          
Query: 209  tcggtgcaaccttc 222
            ||||| ||||||||
Sbjct: 1245 tcggtacaaccttc 1232
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>gb|AF338240.1|AF338240 Zantedeschia aethiopica rubisco activase (rca4) mRNA, partial cds
          Length = 1674

 Score =  103 bits (52), Expect = 6e-19
 Identities = 166/204 (81%)
 Strand = Plus / Minus

                                                                        
Query: 303  ctaaccgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctg 362
            |||||| |||||||| |||||||| ||||| ||||| || || ||||| |||||||||| 
Sbjct: 1308 ctaaccatagaaggatccagtcttgatcgcgtcctgattggcgtcaccaagagctgcctc 1249

                                                                        
Query: 363  gctcatgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcat 422
            ||||| |||  |||| || |||||||| | ||| || || ||||| ||||| || |||||
Sbjct: 1248 gctcaggtacttgtcggccagctgcaccctcttcacgttctcctgttcctgcaccagcat 1189

                                                                        
Query: 423  gtgcccgtactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggccc 482
             |  |||||||| |||||||| || |  |||||||| |||||| |||| |||   |||||
Sbjct: 1188 attgccgtactccagcagcttgtccagggtcatcttgggctgcgcgaacgtcggcggccc 1129

                                    
Query: 483  gtcccgcgagttcaccagcctctt 506
             ||| |||||||||||||||||||
Sbjct: 1128 ctccagcgagttcaccagcctctt 1105



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 64/74 (86%)
 Strand = Plus / Minus

                                                                        
Query: 149  gtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttcttggcattttgg 208
            ||||| ||||||||||| ||||||||||| ||||| |||||| ||||  |||||||  ||
Sbjct: 1450 gtgtacaggcagctgccatcgtcgctcctggccgtcgggtcgaagttggtggcattccgg 1391

                          
Query: 209  tcggtgcaaccttc 222
            ||||| ||||||||
Sbjct: 1390 tcggtacaaccttc 1377
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>gb|DQ023668.1| Oryza sativa (indica cultivar-group) cultivar Tetep genomic
           sequence
          Length = 234

 Score =  101 bits (51), Expect = 2e-18
 Identities = 84/95 (88%)
 Strand = Plus / Minus

                                                                       
Query: 139 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 198
           |||||||||| | |||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 135 tgcttaaaagttttaaaggcagctgccgtcgtcgctcctcgccgttgggtcgaagttctt 76

                                              
Query: 199 ggcattttggtcggtgcaaccttccggcacgggca 233
           ||||    ||||||  |||||||||||||| ||||
Sbjct: 75  ggcaacagggtcgggtcaaccttccggcacaggca 41
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>gb|AF338239.1|AF338239 Zantedeschia aethiopica rubisco activase (rca3) mRNA, partial cds
          Length = 1494

 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 160/197 (81%)
 Strand = Plus / Minus

                                                                        
Query: 310  tagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggctcatg 369
            |||||||| |||||||| ||||| ||||| || || ||||| |||||||||| ||||| |
Sbjct: 1164 tagaaggatccagtcttgatcgcgtcctgattggcgtcaccaagagctgcctcgctcagg 1105

                                                                        
Query: 370  taggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgtgcccg 429
            ||  |||| || |||||||| | ||| || || ||||| ||||| || ||||| |  |||
Sbjct: 1104 tacttgtcggccagctgcaccctcttcacgttctcctgttcctgcaccagcatattgccg 1045

                                                                        
Query: 430  tactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggcccgtcccgc 489
            ||||| |||||||| || |  |||||||| |||||| |||| |||   ||||| ||| ||
Sbjct: 1044 tactccagcagcttgtccagggtcatcttgggctgcgcgaacgtcggcggcccctccagc 985

                             
Query: 490  gagttcaccagcctctt 506
            |||||||||||||||||
Sbjct: 984  gagttcaccagcctctt 968



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 64/74 (86%)
 Strand = Plus / Minus

                                                                        
Query: 149  gtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttcttggcattttgg 208
            ||||| ||||||||||| ||||||||||| ||||| |||||| ||||  |||||||  ||
Sbjct: 1275 gtgtacaggcagctgccatcgtcgctcctggccgtcgggtcgaagttggtggcattccgg 1216

                          
Query: 209  tcggtgcaaccttc 222
            ||||| ||||||||
Sbjct: 1215 tcggtacaaccttc 1202
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>gb|AF251264.1|AF251264 Triticum aestivum ribulose bisphosphate carboxylase activase B (RcaB)
            mRNA, complete cds; nuclear gene for chloroplast product
          Length = 1525

 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 148/181 (81%)
 Strand = Plus / Minus

                                                                        
Query: 382  agctgcacacgcttgacattgtcctgctcctggacgagcatgtgcccgtactctagcagc 441
            |||||||| ||||| || || |||||||||||||| |||||||| |||||||| |  |||
Sbjct: 1242 agctgcacgcgcttcacgttctcctgctcctggaccagcatgtggccgtactccatgagc 1183

                                                                        
Query: 442  ttctcgactgtcatctttggctgctcgaaggtcacgggcccgtcccgcgagttcaccagc 501
            |||||||  |||||||| ||||| ||||| |||   ||||| ||||  ||||| || |||
Sbjct: 1182 ttctcgatggtcatcttgggctggtcgaacgtcggcggcccctccctggagttgacgagc 1123

                                                                        
Query: 502  ctcttgccaatgttctcgattccggtagagccgacccacttgcgcacctcatcgtcgtac 561
            | ||||   ||||||||||  ||| |   ||||||||||||||||||||| |||||||||
Sbjct: 1122 cgcttggagatgttctcgacgccgatctcgccgacccacttgcgcacctcgtcgtcgtac 1063

             
Query: 562  a 562
            |
Sbjct: 1062 a 1062
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>gb|AF305876.2| Zea mays ribulose 1,5-bisphosphate carboxylase/oxygenase activase
           precursor, mRNA, partial cds
          Length = 1336

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 132/160 (82%)
 Strand = Plus / Minus

                                                                       
Query: 311 agaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggctcatgt 370
           ||||||| ||||||||||| || |||| ||| || ||||| ||||| |||| | | | ||
Sbjct: 919 agaaggagccagtcttcatggcgtcctcgttggcttcaccaagagcagcctcgttgaggt 860

                                                                       
Query: 371 aggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgtgcccgt 430
           |  ||||||||||||||||||||||||| || |||||||||   || |||||||| ||||
Sbjct: 859 acttgtcagcaagctgcacacgcttgacgttctcctgctccgccaccagcatgtgtccgt 800

                                                   
Query: 431 actctagcagcttctcgactgtcatctttggctgctcgaa 470
           |||| |  ||||||||||  || ||||| |||||||||||
Sbjct: 799 actccaagagcttctcgatcgttatcttgggctgctcgaa 760
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>gb|AF084478.3| Zea mays ribulose-1,5-bisphosphate carboxylase/oxygenase activase
            precursor (rca1) mRNA, complete cds
          Length = 1424

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 132/160 (82%)
 Strand = Plus / Minus

                                                                        
Query: 311  agaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggctcatgt 370
            ||||||| ||||||||||| || |||| ||| || ||||| ||||| |||| | | | ||
Sbjct: 1314 agaaggagccagtcttcatggcgtcctcgttggcttcaccaagagcagcctcgttgaggt 1255

                                                                        
Query: 371  aggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgtgcccgt 430
            |  ||||||||||||||||||||||||| || |||||||||   || |||||||| ||||
Sbjct: 1254 acttgtcagcaagctgcacacgcttgacgttctcctgctccgccaccagcatgtgtccgt 1195

                                                    
Query: 431  actctagcagcttctcgactgtcatctttggctgctcgaa 470
            |||| |  ||||||||||  || ||||| |||||||||||
Sbjct: 1194 actccaagagcttctcgatcgttatcttgggctgctcgaa 1155
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>gb|AY110044.1| Zea mays CL1146_1 mRNA sequence
          Length = 1750

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 132/160 (82%)
 Strand = Plus / Minus

                                                                        
Query: 311  agaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggctcatgt 370
            ||||||| ||||||||||| || |||| ||| || ||||| ||||| |||| | | | ||
Sbjct: 1314 agaaggagccagtcttcatggcgtcctcgttggcttcaccaagagcagcctcgttgaggt 1255

                                                                        
Query: 371  aggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgtgcccgt 430
            |  ||||||||||||||||||||||||| || |||||||||   || |||||||| ||||
Sbjct: 1254 acttgtcagcaagctgcacacgcttgacgttctcctgctccgccaccagcatgtgtccgt 1195

                                                    
Query: 431  actctagcagcttctcgactgtcatctttggctgctcgaa 470
            |||| |  ||||||||||  || ||||| |||||||||||
Sbjct: 1194 actccaagagcttctcgatcgttatcttgggctgctcgaa 1155
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>gb|M55448.1|BLYRCAB Hordeum vulgare rubisco activase (RcaB) mRNA, complete cds
          Length = 1656

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 77/89 (86%)
 Strand = Plus / Minus

                                                                        
Query: 382  agctgcacacgcttgacattgtcctgctcctggacgagcatgtgcccgtactctagcagc 441
            ||||||||||||||||| || |||||||||||||| |||||||| |||||||| |  |||
Sbjct: 1392 agctgcacacgcttgacgttctcctgctcctggaccagcatgtggccgtactccatgagc 1333

                                         
Query: 442  ttctcgactgtcatctttggctgctcgaa 470
            ||||| |  |||||||| ||||| |||||
Sbjct: 1332 ttctctatggtcatcttgggctggtcgaa 1304



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 31/32 (96%)
 Strand = Plus / Minus

                                            
Query: 531  gccgacccacttgcgcacctcatcgtcgtaca 562
            ||||||||||||||||||||| ||||||||||
Sbjct: 1243 gccgacccacttgcgcacctcgtcgtcgtaca 1212
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>emb|X60093.1|BPNIR1 B.pendula mRNA for nitrite reductase
          Length = 2472

 Score = 79.8 bits (40), Expect = 9e-12
 Identities = 97/116 (83%)
 Strand = Plus / Minus

                                                                       
Query: 328 atcgcatcctggttagcatcacccagagctgcctggctcatgtaggtgtcagcaagctgc 387
           |||| ||||| ||| ||||| || |||||||| ||||||| ||| ||||| || || || 
Sbjct: 118 atcgaatcctcgtttgcatctccaagagctgcttggctcaagtacgtgtctgccagttga 59

                                                                   
Query: 388 acacgcttgacattgtcctgctcctggacgagcatgtgcccgtactctagcagctt 443
           || | ||| |||||||||||||||||||| |||||||  || ||||||||||||||
Sbjct: 58  actctcttcacattgtcctgctcctggacaagcatgtttccatactctagcagctt 3
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
               sequence
          Length = 22696651

 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 81/95 (85%)
 Strand = Plus / Minus

                                                                           
Query: 139     tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 198
               |||||| ||||||||||||||| ||| ||||| |||| | |||||||||||  |||| ||
Sbjct: 4541413 tgcttagaaggtgtaaaggcagatgctgtcgttgctcatcgccgttgggtcaaagttgtt 4541354

                                                  
Query: 199     ggcattttggtcggtgcaaccttccggcacgggca 233
               ||||    |||||||||||||||||||||| ||||
Sbjct: 4541353 ggcaacagggtcggtgcaaccttccggcacaggca 4541319
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>dbj|AP005592.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0638A12
          Length = 140731

 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 81/95 (85%)
 Strand = Plus / Minus

                                                                         
Query: 139   tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 198
             |||||| ||||||||||||||| ||| ||||| |||| | |||||||||||  |||| ||
Sbjct: 84787 tgcttagaaggtgtaaaggcagatgctgtcgttgctcatcgccgttgggtcaaagttgtt 84728

                                                
Query: 199   ggcattttggtcggtgcaaccttccggcacgggca 233
             ||||    |||||||||||||||||||||| ||||
Sbjct: 84727 ggcaacagggtcggtgcaaccttccggcacaggca 84693
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>emb|Z21794.1|MDRBSCACA M.domestica ribulose-1,5-bisphosphate carboxylase/oxygenase activase
            mRNA
          Length = 1853

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 106/132 (80%)
 Strand = Plus / Minus

                                                                        
Query: 339  gttagcatcacccagagctgcctggctcatgtaggtgtcagcaagctgcacacgcttgac 398
            |||||||||||| ||||| |||| ||||| |||  | ||||| |  || || | ||| ||
Sbjct: 1363 gttagcatcaccaagagcagcctcgctcaagtacttatcagccaattgaactctcttcac 1304

                                                                        
Query: 399  attgtcctgctcctggacgagcatgtgcccgtactctagcagcttctcgactgtcatctt 458
            ||| || ||||| ||||| |||||||  |||||||| || ||||| ||||  ||||||||
Sbjct: 1303 attctcttgctcttggacaagcatgtttccgtactcgaggagcttttcgatagtcatctt 1244

                        
Query: 459  tggctgctcgaa 470
             |||||||||||
Sbjct: 1243 cggctgctcgaa 1232
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>gb|AY312576.1| Larrea tridentata Rubisco activase beta form precursor (RCA2) mRNA,
            complete cds; nuclear gene for chloroplast product
          Length = 1694

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 43/50 (86%)
 Strand = Plus / Minus

                                                              
Query: 331  gcatcctggttagcatcacccagagctgcctggctcatgtaggtgtcagc 380
            |||||||||||||||||||| || || ||||  ||||||||  |||||||
Sbjct: 1355 gcatcctggttagcatcaccaagggcagcctcactcatgtacttgtcagc 1306
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>gb|AC114810.4| Homo sapiens BAC clone RP11-1293J14 from 2, complete sequence
          Length = 119249

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 344   catcacccagagctgcctggct 365
             ||||||||||||||||||||||
Sbjct: 51275 catcacccagagctgcctggct 51254
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>emb|BX000451.4| Zebrafish DNA sequence from clone CH211-30E10, complete sequence
          Length = 153155

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 44    aatatatttagagatatattaa 65
             ||||||||||||||||||||||
Sbjct: 67942 aatatatttagagatatattaa 67963
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>gb|AC166748.3| Mus musculus chromosome 19, clone RP23-345M21, complete sequence
          Length = 178257

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 2      aatgataagtaggtgtattgg 22
              |||||||||||||||||||||
Sbjct: 109370 aatgataagtaggtgtattgg 109390
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>gb|AC138278.9| Mus musculus chromosome 8, clone RP23-378E4, complete sequence
          Length = 177245

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 46    tatatttagagatatattaac 66
             |||||||||||||||||||||
Sbjct: 12315 tatatttagagatatattaac 12335
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>gb|AC161354.2| Mus musculus chromosome 8, clone RP23-373C4, complete sequence
          Length = 98660

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 46    tatatttagagatatattaac 66
             |||||||||||||||||||||
Sbjct: 66387 tatatttagagatatattaac 66367
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>gb|AC152426.10| Mus musculus chromosome 19, clone RP23-216E17, complete sequence
          Length = 217738

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 2      aatgataagtaggtgtattgg 22
              |||||||||||||||||||||
Sbjct: 149522 aatgataagtaggtgtattgg 149502
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>gb|AC117829.7| Mus musculus chromosome 19, clone RP24-95D15, complete sequence
          Length = 168084

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 2      aatgataagtaggtgtattgg 22
              |||||||||||||||||||||
Sbjct: 131097 aatgataagtaggtgtattgg 131077
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>dbj|AK040781.1| Mus musculus adult male aorta and vein cDNA, RIKEN full-length
            enriched library, clone:A530024M06 product:Hypothetical
            protein FLJ33092 (UST1r) homolog [Homo sapiens], full
            insert sequence
          Length = 2605

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 2    aatgataagtaggtgtattgg 22
            |||||||||||||||||||||
Sbjct: 2351 aatgataagtaggtgtattgg 2331
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 115     aaacatcagatattaaaagtg 135
               |||||||||||||||||||||
Sbjct: 3040440 aaacatcagatattaaaagtg 3040420
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>gb|AC144525.3| Homo sapiens BAC clone CTC-833E13 from 2, complete sequence
          Length = 75381

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 266   atgcagcaagagatggtgggt 286
             |||||||||||||||||||||
Sbjct: 63530 atgcagcaagagatggtgggt 63550
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>emb|Y10657.1|CLRCAGENE C.littorale rca gene
          Length = 2513

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 382  agctgcacacgcttgacattgtcctgctc 410
            |||||||| ||||||||||| ||||||||
Sbjct: 2133 agctgcacgcgcttgacattctcctgctc 2105
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 115     aaacatcagatattaaaagtg 135
               |||||||||||||||||||||
Sbjct: 3040385 aaacatcagatattaaaagtg 3040365
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>emb|AL731748.3|CNS08C7X Oryza sativa chromosome 12, . BAC OSJNBa0095K18 of library OSJNBa from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 159711

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 115    aaacatcagatattaaaagtg 135
              |||||||||||||||||||||
Sbjct: 114403 aaacatcagatattaaaagtg 114423
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>gb|AC164586.7| Mus musculus chromosome 8, clone RP24-258B3, complete sequence
          Length = 105452

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 46   tatatttagagatatattaac 66
            |||||||||||||||||||||
Sbjct: 6217 tatatttagagatatattaac 6197
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>gb|AC003067.59| Mus musculus Chromosome 16 BAC Clone tbx3 Syntenic To Homo sapiens
             22q11.2 DGCR Region, complete sequence
          Length = 262062

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 251   cctttacctcctcctatgca 270
             ||||||||||||||||||||
Sbjct: 46359 cctttacctcctcctatgca 46378
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>gb|U60105.1| Bos taurus large conductance calcium-activated potassium channel
            alpha subunit mRNA, partial cds
          Length = 3448

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 344  catcacccagagctgcctggctca 367
            |||| |||||||||||||||||||
Sbjct: 1542 catcgcccagagctgcctggctca 1565
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>gb|AF414359.1|AF414356S4 Mus musculus thioredoxin reductase (Trxr2) gene, exons 12 through 18,
            and complete cds
          Length = 16432

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 251  cctttacctcctcctatgca 270
            ||||||||||||||||||||
Sbjct: 1637 cctttacctcctcctatgca 1656
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>gb|AY312575.1| Larrea tridentata Rubisco activase alpha form precursor (RCA1) mRNA,
            complete cds; nuclear gene for chloroplast product
          Length = 1724

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 68/84 (80%)
 Strand = Plus / Minus

                                                                        
Query: 340  ttagcatcacccagagctgcctggctcatgtaggtgtcagcaagctgcacacgcttgaca 399
            ||||||||||| ||||| |||| |  ||||||  ||||||| |  || || | |||||| 
Sbjct: 1346 ttagcatcaccaagagcagcctcggacatgtatttgtcagctaattgaactctcttgacg 1287

                                    
Query: 400  ttgtcctgctcctggacgagcatg 423
            || |||||||||||||| ||||||
Sbjct: 1286 ttctcctgctcctggacaagcatg 1263
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>gb|AC133488.30| Mus musculus strain C57BL/6J clone rp23-432e14, complete sequence
          Length = 202128

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 251   cctttacctcctcctatgca 270
             ||||||||||||||||||||
Sbjct: 32945 cctttacctcctcctatgca 32964
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>ref|XM_765396.1| Giardia lamblia ATCC 50803 heat shock protein (hsp70) partial mRNA
          Length = 3732

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 21   ggtctttgccaatgggtata 40
            ||||||||||||||||||||
Sbjct: 2247 ggtctttgccaatgggtata 2266
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>ref|XM_751239.1| Ustilago maydis 521 hypothetical protein (UM00185.1) partial mRNA
          Length = 531

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 375 gtcagcaagctgcacacgct 394
           ||||||||||||||||||||
Sbjct: 242 gtcagcaagctgcacacgct 223
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>gb|AC019210.7| Homo sapiens BAC clone RP11-449G3 from 7, complete sequence
          Length = 177402

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 120    tcagatattaaaagtggcat 139
              ||||||||||||||||||||
Sbjct: 141058 tcagatattaaaagtggcat 141077
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>gb|AC011228.9| Homo sapiens BAC clone GS1-18A18 from 7, complete sequence
          Length = 163782

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 120    tcagatattaaaagtggcat 139
              ||||||||||||||||||||
Sbjct: 142564 tcagatattaaaagtggcat 142583
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>gb|AC140953.1| Pan troglodytes BAC clone RP43-37K18 from 7, complete sequence
          Length = 204813

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 120   tcagatattaaaagtggcat 139
             ||||||||||||||||||||
Sbjct: 95930 tcagatattaaaagtggcat 95911
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>gb|AF026000.2| Sus scrofa calcium-activated potassium channel alpha subunit mRNA,
            complete cds
          Length = 3459

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 344  catcacccagagctgcctggctca 367
            |||| |||||||||||||||||||
Sbjct: 1596 catcgcccagagctgcctggctca 1619
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>gb|AC139338.3| Homo sapiens 3 BAC RP11-449O23 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 166149

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 44    aatatatttagagatatatt 63
             ||||||||||||||||||||
Sbjct: 30454 aatatatttagagatatatt 30473
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>gb|AC161351.3| Mus musculus chromosome 15, clone RP24-142I15, complete sequence
          Length = 161308

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 394    ttgacattgtcctgctcctg 413
              ||||||||||||||||||||
Sbjct: 126438 ttgacattgtcctgctcctg 126419
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>ref|NM_174680.2| Bos taurus potassium large conductance calcium-activated channel,
            subfamily M, alpha member 1 (KCNMA1), mRNA
          Length = 6183

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 344  catcacccagagctgcctggctca 367
            |||| |||||||||||||||||||
Sbjct: 1912 catcgcccagagctgcctggctca 1935
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>gb|AE011750.1| Xanthomonas axonopodis pv. citri str. 306,  section 128 of 469 of the
            complete genome
          Length = 11388

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 148  ggtgtaaaggcagctgccgtcgtcgctc 175
            |||||| |||| ||||||||||||||||
Sbjct: 5160 ggtgtacaggctgctgccgtcgtcgctc 5133
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>dbj|AP007170.1| Aspergillus oryzae RIB40 genomic DNA, SC138
          Length = 504369

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 68    aaacatgcccagcaatcgcttgga 91
             |||||||||||||||||| |||||
Sbjct: 41692 aaacatgcccagcaatcgattgga 41715
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>gb|AC003066.18| Mus musculus Chromosome 16 BAC Clone tbx1 Syntenic To Homo sapiens
             22q11.2 DGCR Region, complete sequence
          Length = 176974

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 251   cctttacctcctcctatgca 270
             ||||||||||||||||||||
Sbjct: 34662 cctttacctcctcctatgca 34681
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>gb|AY033474.1| Bos taurus BK potassium ion channel isoform C mRNA, partial cds,
            alternatively spliced
          Length = 3430

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 344  catcacccagagctgcctggctca 367
            |||| |||||||||||||||||||
Sbjct: 1636 catcgcccagagctgcctggctca 1659
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>gb|AY033473.1| Bos taurus BK potassium ion channel isoform B mRNA, complete cds,
            alternatively spliced
          Length = 4490

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 344  catcacccagagctgcctggctca 367
            |||| |||||||||||||||||||
Sbjct: 2003 catcgcccagagctgcctggctca 2026
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>gb|AY033472.1| Bos taurus BK potassium ion channel isoform A mRNA, complete cds,
            alternatively spliced
          Length = 6183

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 344  catcacccagagctgcctggctca 367
            |||| |||||||||||||||||||
Sbjct: 1912 catcgcccagagctgcctggctca 1935
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>emb|BX000985.18| Zebrafish DNA sequence from clone DKEY-13M3 in linkage group 15,
             complete sequence
          Length = 134752

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 134   tggcatgcttaaaaggtgta 153
             ||||||||||||||||||||
Sbjct: 78235 tggcatgcttaaaaggtgta 78254
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>gb|AC102845.9| Mus musculus chromosome 15, clone RP24-389O7, complete sequence
          Length = 125424

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 394    ttgacattgtcctgctcctg 413
              ||||||||||||||||||||
Sbjct: 106960 ttgacattgtcctgctcctg 106979
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>ref|NM_214219.1| Sus scrofa calcium-activated potassium channel alpha subunit
            (KCNMA1), mRNA
          Length = 3459

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 344  catcacccagagctgcctggctca 367
            |||| |||||||||||||||||||
Sbjct: 1596 catcgcccagagctgcctggctca 1619
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>ref|XM_222660.3| PREDICTED: Rattus norvegicus leiomodin 1 (smooth muscle)
           (predicted) (Lmod1_predicted), mRNA
          Length = 1920

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 240 cttgctgtgctcctttacctcctc 263
           ||||||| ||||||||||||||||
Sbjct: 648 cttgctgggctcctttacctcctc 625
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>gb|AC133487.14| Mus musculus strain C57BL/6J clone rp23-285e22, complete sequence
          Length = 158595

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 251   cctttacctcctcctatgca 270
             ||||||||||||||||||||
Sbjct: 27755 cctttacctcctcctatgca 27736
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>gb|AC007625.2|AC007625 Genomic sequence of Homo sapiens clone 2314F2 from chromosome 18,
             complete sequence
          Length = 174701

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 44    aatatatttagagatatatt 63
             ||||||||||||||||||||
Sbjct: 62504 aatatatttagagatatatt 62485
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>gb|AC091764.35| Mus musculus strain C57BL/6J chromosome 10 clone rp23-202b12, complete
              sequence
          Length = 230848

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 119    atcagatattaaaagtggcatgct 142
              ||||||||||||||||| ||||||
Sbjct: 127875 atcagatattaaaagtgccatgct 127852


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,152,225
Number of Sequences: 3902068
Number of extensions: 4152225
Number of successful extensions: 80434
Number of sequences better than 10.0: 79
Number of HSP's better than 10.0 without gapping: 78
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 80096
Number of HSP's gapped (non-prelim): 285
length of query: 562
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 539
effective length of database: 17,143,297,704
effective search space: 9240237462456
effective search space used: 9240237462456
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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