ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbah61l13
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK059404.1| Oryza sativa (japonica cultivar-group) cDNA clon... 125 1e-25
2ref|XM_473782.1| Oryza sativa (japonica cultivar-group), predic... 123 4e-25
3dbj|AK100301.1| Oryza sativa (japonica cultivar-group) cDNA clon... 123 4e-25
4dbj|AK072200.1| Oryza sativa (japonica cultivar-group) cDNA clon... 123 4e-25
5emb|AL606638.2|OSJN00077 Oryza sativa genomic DNA, chromosome 4,... 88 2e-14
6dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 88 2e-14
7dbj|AK073515.1| Oryza sativa (japonica cultivar-group) cDNA clon... 88 2e-14
8ref|XM_480915.1| Oryza sativa (japonica cultivar-group), mRNA 62 1e-06
9dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 62 1e-06
10dbj|AP005249.3| Oryza sativa (japonica cultivar-group) genomic D... 62 1e-06
11dbj|AP004657.2| Oryza sativa (japonica cultivar-group) genomic D... 62 1e-06
12dbj|AK120070.1| Oryza sativa (japonica cultivar-group) cDNA clon... 54 3e-04
13emb|BX927371.12| Zebrafish DNA sequence from clone DKEY-1C17 in ... 46 0.081
14emb|AL928637.7| Zebrafish DNA sequence from clone CH211-227I6, c... 46 0.081
15emb|AL807742.7| Human DNA sequence from clone RP11-274G22 on chr... 44 0.32
16gb|AC074191.3| Homo sapiens chromosome 11 clone RP11-502G22, com... 44 0.32
17emb|AL662893.12| Mouse DNA sequence from clone RP23-202G21 on ch... 44 0.32
18emb|AL161447.20| Human DNA sequence from clone RP11-379P1 on chr... 42 1.3
19emb|AL157364.15| Human DNA sequence from clone RP11-31H2 on chro... 42 1.3
20gb|AC129805.7| Homo sapiens 12 BAC RP11-125N22 (Roswell Park Can... 42 1.3
21gb|AE010300.1| Leptospira interrogans serovar lai str. 56601 chr... 42 1.3
22gb|AC117373.10| Homo sapiens 12 BAC RP11-174M13 (Roswell Park Ca... 42 1.3
23gb|AC022336.12| Homo sapiens 3 BAC RP11-71H17 (Roswell Park Canc... 42 1.3
24dbj|AB112588.1| Satsuma dwarf virus CP gene for coat proteins, p... 42 1.3
25gb|AE016823.1| Leptospira interrogans serovar Copenhageni str. F... 42 1.3
26gb|AY958086.1| Zygnema circumcarinatum chloroplast, complete genome 40 5.0
27gb|AC131191.4| Mus musculus BAC clone RP24-464B16 from chromosom... 40 5.0
28gb|AC130714.3| Mus musculus BAC clone RP23-367L18 from chromosom... 40 5.0
29gb|AY299397.1| Pisum sativum clone Ps-cos14 Ogre retrotransposon... 40 5.0
30emb|AL357912.10| Human DNA sequence from clone RP11-328N1 on chr... 40 5.0
31emb|AL021069.1|HS970D1 Human DNA sequence from clone RP5-970D1 o... 40 5.0
32emb|BX537139.17| Zebrafish DNA sequence from clone DKEY-46K9 in ... 40 5.0
33emb|Y11066.1|DMKLUGEN D.melanogaster mRNA for klumpfuss gene 40 5.0
34gb|AF214671.8| Homo sapiens chromosome 8 clone GS1-42F21 map 8qt... 40 5.0
35emb|CR626927.1| Bacteroides fragilis NCTC 9343, complete genome 40 5.0
36emb|BX571871.1| Photorhabdus luminescens subsp. laumondii TTO1 c... 40 5.0
37gb|AC090459.6| Homo sapiens chromosome 18, clone RP11-125E6, com... 40 5.0
38gb|AC099845.2| Homo sapiens chromosome 18, clone RP11-812D21, co... 40 5.0
39gb|AC007268.5| Arabidopsis thaliana chromosome 2 clone T27D6 map... 40 5.0
40dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.0
41dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.0
42gb|AC103777.14| Homo sapiens chromosome 8, clone RP11-460G23, co... 40 5.0
43gb|AC087544.2|AC087544 Oryza sativa (japonica cultivar-group) ch... 40 5.0
44gb|AC007251.4| Homo sapiens BAC clone RP11-373G23 from 2, comple... 40 5.0
45gb|AC090644.2| Homo sapiens chromosome 3 clone RP11-322M13 map 3... 40 5.0
46gb|AC027689.10|AC027689 Homo sapiens chromosome 18 clone RP11-24... 40 5.0
47dbj|AP006841.1| Bacteroides fragilis YCH46 DNA, complete genome 40 5.0
48dbj|AP005412.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.0
49emb|CR848035.7| Zebrafish DNA sequence from clone CH211-203J1 in... 40 5.0
50gb|AY104424.1| Zea mays PCO061312 mRNA sequence 40 5.0
51emb|AL357153.4|CNS05TDV Human chromosome 14 DNA sequence BAC C-2... 40 5.0
52dbj|AP005713.2| Homo sapiens genomic DNA, chromosome 8q24, clone... 40 5.0
53gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 40 5.0
54emb|AL929277.9| Mouse DNA sequence from clone RP23-153J22 on chr... 40 5.0
55gb|U41104.2| Caenorhabditis elegans cosmid T12C9, complete sequence 40 5.0
56dbj|AP001578.3| Homo sapiens genomic DNA, chromosome 6q25.2, clo... 40 5.0
57dbj|AP005120.2| Homo sapiens genomic DNA, chromosome 18p clone:R... 40 5.0 
>dbj|AK059404.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-027-B09, full
           insert sequence
          Length = 694

 Score =  125 bits (63), Expect = 1e-25
 Identities = 121/141 (85%)
 Strand = Plus / Minus

                                                                       
Query: 189 ggcgacggatttgcagatggggcaccagttcttctgccggagccagtgctgtatgcangt 248
           |||||||||||| || ||||| ||||||||||||||||||||||||| || |||||| | 
Sbjct: 575 ggcgacggatttacaaatgggacaccagttcttctgccggagccagttctttatgcagga 516

                                                                       
Query: 249 gatgtggtagtagtgcttacacgccatgttccccacctnctcaccaccagagtactcctc 308
           || ||||||||| || || ||  |||| || ||||||| ||||||| | || || |||||
Sbjct: 515 gaagtggtagtaatgtttgcagaccatcttgcccacctcctcaccatctgaatattcctc 456

                                
Query: 309 ctggcatatgctgcattttct 329
           |||||||||||||||||||||
Sbjct: 455 ctggcatatgctgcattttct 435
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>ref|XM_473782.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1104

 Score =  123 bits (62), Expect = 4e-25
 Identities = 120/140 (85%)
 Strand = Plus / Minus

                                                                        
Query: 190  gcgacggatttgcagatggggcaccagttcttctgccggagccagtgctgtatgcangtg 249
            ||||||||||| || ||||| ||||||||||||||||||||||||| || |||||| | |
Sbjct: 1088 gcgacggatttacaaatgggacaccagttcttctgccggagccagttctttatgcaggag 1029

                                                                        
Query: 250  atgtggtagtagtgcttacacgccatgttccccacctnctcaccaccagagtactcctcc 309
            | ||||||||| || || ||  |||| || ||||||| ||||||| | || || ||||||
Sbjct: 1028 aagtggtagtaatgtttgcagaccatcttgcccacctcctcaccatctgaatattcctcc 969

                                
Query: 310  tggcatatgctgcattttct 329
            ||||||||||||||||||||
Sbjct: 968  tggcatatgctgcattttct 949
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>dbj|AK100301.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023077P18, full
            insert sequence
          Length = 1493

 Score =  123 bits (62), Expect = 4e-25
 Identities = 120/140 (85%)
 Strand = Plus / Minus

                                                                        
Query: 190  gcgacggatttgcagatggggcaccagttcttctgccggagccagtgctgtatgcangtg 249
            ||||||||||| || ||||| ||||||||||||||||||||||||| || |||||| | |
Sbjct: 1243 gcgacggatttacaaatgggacaccagttcttctgccggagccagttctttatgcaggag 1184

                                                                        
Query: 250  atgtggtagtagtgcttacacgccatgttccccacctnctcaccaccagagtactcctcc 309
            | ||||||||| || || ||  |||| || ||||||| ||||||| | || || ||||||
Sbjct: 1183 aagtggtagtaatgtttgcagaccatcttgcccacctcctcaccatctgaatattcctcc 1124

                                
Query: 310  tggcatatgctgcattttct 329
            ||||||||||||||||||||
Sbjct: 1123 tggcatatgctgcattttct 1104
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>dbj|AK072200.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013160D07, full
            insert sequence
          Length = 1363

 Score =  123 bits (62), Expect = 4e-25
 Identities = 120/140 (85%)
 Strand = Plus / Minus

                                                                        
Query: 190  gcgacggatttgcagatggggcaccagttcttctgccggagccagtgctgtatgcangtg 249
            ||||||||||| || ||||| ||||||||||||||||||||||||| || |||||| | |
Sbjct: 1243 gcgacggatttacaaatgggacaccagttcttctgccggagccagttctttatgcaggag 1184

                                                                        
Query: 250  atgtggtagtagtgcttacacgccatgttccccacctnctcaccaccagagtactcctcc 309
            | ||||||||| || || ||  |||| || ||||||| ||||||| | || || ||||||
Sbjct: 1183 aagtggtagtaatgtttgcagaccatcttgcccacctcctcaccatctgaatattcctcc 1124

                                
Query: 310  tggcatatgctgcattttct 329
            ||||||||||||||||||||
Sbjct: 1123 tggcatatgctgcattttct 1104
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>emb|AL606638.2|OSJN00077 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0041A02,
              complete sequence
          Length = 166804

 Score = 87.7 bits (44), Expect = 2e-14
 Identities = 102/122 (83%)
 Strand = Plus / Plus

                                                                          
Query: 190    gcgacggatttgcagatggggcaccagttcttctgccggagccagtgctgtatgcangtg 249
              ||||||||||| || ||||| ||||||||||||||||||||||||| || |||||| | |
Sbjct: 107109 gcgacggatttacaaatgggacaccagttcttctgccggagccagttctttatgcaggag 107168

                                                                          
Query: 250    atgtggtagtagtgcttacacgccatgttccccacctnctcaccaccagagtactcctcc 309
              | ||||||||| || || ||  |||| || ||||||| ||||||| | || || ||||||
Sbjct: 107169 aagtggtagtaatgtttgcagaccatcttgcccacctcctcaccatctgaatattcctcc 107228

                
Query: 310    tg 311
              ||
Sbjct: 107229 tg 107230



 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 308    cctggcatatgctgcattttct 329
              ||||||||||||||||||||||
Sbjct: 107325 cctggcatatgctgcattttct 107346
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 87.7 bits (44), Expect = 2e-14
 Identities = 102/122 (83%)
 Strand = Plus / Plus

                                                                            
Query: 190      gcgacggatttgcagatggggcaccagttcttctgccggagccagtgctgtatgcangtg 249
                ||||||||||| || ||||| ||||||||||||||||||||||||| || |||||| | |
Sbjct: 30473732 gcgacggatttacaaatgggacaccagttcttctgccggagccagttctttatgcaggag 30473791

                                                                            
Query: 250      atgtggtagtagtgcttacacgccatgttccccacctnctcaccaccagagtactcctcc 309
                | ||||||||| || || ||  |||| || ||||||| ||||||| | || || ||||||
Sbjct: 30473792 aagtggtagtaatgtttgcagaccatcttgcccacctcctcaccatctgaatattcctcc 30473851

                  
Query: 310      tg 311
                ||
Sbjct: 30473852 tg 30473853



 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                      
Query: 308      cctggcatatgctgcattttct 329
                ||||||||||||||||||||||
Sbjct: 30473948 cctggcatatgctgcattttct 30473969
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>dbj|AK073515.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033040F16, full
           insert sequence
          Length = 2340

 Score = 87.7 bits (44), Expect = 2e-14
 Identities = 102/122 (83%)
 Strand = Plus / Plus

                                                                       
Query: 190 gcgacggatttgcagatggggcaccagttcttctgccggagccagtgctgtatgcangtg 249
           ||||||||||| || ||||| ||||||||||||||||||||||||| || |||||| | |
Sbjct: 593 gcgacggatttacaaatgggacaccagttcttctgccggagccagttctttatgcaggag 652

                                                                       
Query: 250 atgtggtagtagtgcttacacgccatgttccccacctnctcaccaccagagtactcctcc 309
           | ||||||||| || || ||  |||| || ||||||| ||||||| | || || ||||||
Sbjct: 653 aagtggtagtaatgtttgcagaccatcttgcccacctcctcaccatctgaatattcctcc 712

             
Query: 310 tg 311
           ||
Sbjct: 713 tg 714



 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 308 cctggcatatgctgcattttct 329
           ||||||||||||||||||||||
Sbjct: 809 cctggcatatgctgcattttct 830
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>ref|XM_480915.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1050

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 40/43 (93%)
 Strand = Plus / Minus

                                                       
Query: 191  cgacggatttgcagatggggcaccagttcttctgccggagcca 233
            ||||||||||||||||||||||||| ||||| ||||| |||||
Sbjct: 1030 cgacggatttgcagatggggcaccaattcttttgccgaagcca 988
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 40/43 (93%)
 Strand = Plus / Minus

                                                          
Query: 191     cgacggatttgcagatggggcaccagttcttctgccggagcca 233
               ||||||||||||||||||||||||| ||||| ||||| |||||
Sbjct: 8577507 cgacggatttgcagatggggcaccaattcttttgccgaagcca 8577465
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>dbj|AP005249.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OSJNBa0087F21
          Length = 187401

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 40/43 (93%)
 Strand = Plus / Minus

                                                        
Query: 191   cgacggatttgcagatggggcaccagttcttctgccggagcca 233
             ||||||||||||||||||||||||| ||||| ||||| |||||
Sbjct: 89418 cgacggatttgcagatggggcaccaattcttttgccgaagcca 89376
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>dbj|AP004657.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0031C02
          Length = 138843

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 40/43 (93%)
 Strand = Plus / Minus

                                                         
Query: 191    cgacggatttgcagatggggcaccagttcttctgccggagcca 233
              ||||||||||||||||||||||||| ||||| ||||| |||||
Sbjct: 107050 cgacggatttgcagatggggcaccaattcttttgccgaagcca 107008
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>dbj|AK120070.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013003N07, full
            insert sequence
          Length = 2128

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 27/27 (100%)
 Strand = Plus / Minus

                                       
Query: 300  gtactcctcctggcatatgctgcattt 326
            |||||||||||||||||||||||||||
Sbjct: 1869 gtactcctcctggcatatgctgcattt 1843



 Score = 40.1 bits (20), Expect = 5.0
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                
Query: 198  tttgcagatggggcaccagttcttctgccggagcca 233
            |||||| || || |||||||||||||||| ||||||
Sbjct: 1971 tttgcatattggacaccagttcttctgcctgagcca 1936
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>emb|BX927371.12| Zebrafish DNA sequence from clone DKEY-1C17 in linkage group 7,
             complete sequence
          Length = 154034

 Score = 46.1 bits (23), Expect = 0.081
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 81    agaaaagaatagaaaaaagaata 103
             |||||||||||||||||||||||
Sbjct: 76921 agaaaagaatagaaaaaagaata 76943
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>emb|AL928637.7| Zebrafish DNA sequence from clone CH211-227I6, complete sequence
          Length = 163121

 Score = 46.1 bits (23), Expect = 0.081
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 81    agaaaagaatagaaaaaagaata 103
             |||||||||||||||||||||||
Sbjct: 91869 agaaaagaatagaaaaaagaata 91891
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>emb|AL807742.7| Human DNA sequence from clone RP11-274G22 on chromosome X, complete
             sequence
          Length = 172919

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 81    agaaaagaatagaaaaaagaat 102
             ||||||||||||||||||||||
Sbjct: 23788 agaaaagaatagaaaaaagaat 23809
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>gb|AC074191.3| Homo sapiens chromosome 11 clone RP11-502G22, complete sequence
          Length = 179357

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 307   tcctggcatatgctgcattttc 328
             ||||||||||||||||||||||
Sbjct: 75165 tcctggcatatgctgcattttc 75186
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>emb|AL662893.12| Mouse DNA sequence from clone RP23-202G21 on chromosome 11, complete
             sequence
          Length = 205405

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 107   atcttgtgtctagacatttcag 128
             ||||||||||||||||||||||
Sbjct: 98271 atcttgtgtctagacatttcag 98250
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>emb|AL161447.20| Human DNA sequence from clone RP11-379P1 on chromosome 9 Contains the 3'
              end of a novel gene (FLJ21613) similar to rat corneal wound
              healing related protein (includes FLJ22634), the GOLPH2
              gene for golgi phosphoprotein 2 (GP73), a novel pseudogene
              and a CpG island, complete sequence
          Length = 160115

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 81     agaaaagaatagaaaaaagaataca 105
              ||||||||| |||||||||||||||
Sbjct: 116331 agaaaagaaaagaaaaaagaataca 116355
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>emb|AL157364.15| Human DNA sequence from clone RP11-31H2 on chromosome 13 Contians the
            ATP12A gene for ATPase, H+/K+ transporting, nongastric,
            alpha polypeptide, a ribosomal protein L26 (RPL26)
            pseudogene and a CpG island, complete sequence
          Length = 91231

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 147  aacaagcagaggctgctggtg 167
            |||||||||||||||||||||
Sbjct: 2273 aacaagcagaggctgctggtg 2253
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>gb|AC129805.7| Homo sapiens 12 BAC RP11-125N22 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 165378

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 81     agaaaagaatagaaaaaagaataca 105
              ||||||||| |||||||||||||||
Sbjct: 108446 agaaaagaaaagaaaaaagaataca 108422
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>gb|AE010300.1| Leptospira interrogans serovar lai str. 56601 chromosome I, complete
               sequence
          Length = 4332241

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                            
Query: 74      tcgttctagaaaagaatagaaaaaagaat 102
               |||||||||||||||| || |||||||||
Sbjct: 1390052 tcgttctagaaaagaagaggaaaaagaat 1390024
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>gb|AC117373.10| Homo sapiens 12 BAC RP11-174M13 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 175768

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 81    agaaaagaatagaaaaaagaa 101
             |||||||||||||||||||||
Sbjct: 41632 agaaaagaatagaaaaaagaa 41652
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>gb|AC022336.12| Homo sapiens 3 BAC RP11-71H17 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 166071

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 81     agaaaagaatagaaaaaagaataca 105
              ||||||||| |||||||||||||||
Sbjct: 164936 agaaaagaaaagaaaaaagaataca 164960
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>dbj|AB112588.1| Satsuma dwarf virus CP gene for coat proteins, partial cds
          Length = 2160

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                               
Query: 53 ttgaaggcacaaacaaatgtt 73
          |||||||||||||||||||||
Sbjct: 61 ttgaaggcacaaacaaatgtt 41
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>gb|AE016823.1| Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130, chromosome
               I, complete sequence
          Length = 4277185

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                            
Query: 74      tcgttctagaaaagaatagaaaaaagaat 102
               |||||||||||||||| || |||||||||
Sbjct: 2837406 tcgttctagaaaagaagaggaaaaagaat 2837434
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>gb|AY958086.1| Zygnema circumcarinatum chloroplast, complete genome
          Length = 165372

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 78     tctagaaaagaatagaaaaa 97
              ||||||||||||||||||||
Sbjct: 154341 tctagaaaagaatagaaaaa 154360
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>gb|AC131191.4| Mus musculus BAC clone RP24-464B16 from chromosome 18, complete
             sequence
          Length = 136832

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 48    aagtcttgaaggcacaaacaaatg 71
             ||||| ||||||||||||||||||
Sbjct: 64966 aagtcctgaaggcacaaacaaatg 64943
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>gb|AC130714.3| Mus musculus BAC clone RP23-367L18 from chromosome 18, complete sequence
          Length = 193184

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 48     aagtcttgaaggcacaaacaaatg 71
              ||||| ||||||||||||||||||
Sbjct: 170438 aagtcctgaaggcacaaacaaatg 170415
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>gb|AY299397.1| Pisum sativum clone Ps-cos14 Ogre retrotransposon, partial sequence
          Length = 32724

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 81   agaaaagaatagaaaaaaga 100
            ||||||||||||||||||||
Sbjct: 1422 agaaaagaatagaaaaaaga 1441
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>emb|AL357912.10| Human DNA sequence from clone RP11-328N1 on chromosome 1 Contains the
            3' end of a novel gene and the 5' end of the DNAH14 gene
            for dynein (axonemal) heavy polypeptide 14, complete
            sequence
          Length = 130057

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 81   agaaaagaatagaaaaaagaatacagat 108
            ||||||||| ||||||||||| ||||||
Sbjct: 2188 agaaaagaaaagaaaaaagaaaacagat 2215
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>emb|AL021069.1|HS970D1 Human DNA sequence from clone RP5-970D1 on chromosome 1q24 Contains the
             3' end of a variant of the gene for expressed in
             hematopoietic cells (heart, liver) (HLL), complete
             sequence
          Length = 100496

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 78    tctagaaaagaatagaaaaaagaa 101
             |||||||||||| |||||||||||
Sbjct: 78127 tctagaaaagaaaagaaaaaagaa 78104
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>emb|BX537139.17| Zebrafish DNA sequence from clone DKEY-46K9 in linkage group 9,
             complete sequence
          Length = 243063

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 81    agaaaagaatagaaaaaaga 100
             ||||||||||||||||||||
Sbjct: 76238 agaaaagaatagaaaaaaga 76219
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>emb|Y11066.1|DMKLUGEN D.melanogaster mRNA for klumpfuss gene
          Length = 3866

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 82   gaaaagaatagaaaaaagaa 101
            ||||||||||||||||||||
Sbjct: 3217 gaaaagaatagaaaaaagaa 3236
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>gb|AF214671.8| Homo sapiens chromosome 8 clone GS1-42F21 map 8qtel, complete sequence
          Length = 78545

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 119   gacatttcaggagaatctgt 138
             ||||||||||||||||||||
Sbjct: 26683 gacatttcaggagaatctgt 26702
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>emb|CR626927.1| Bacteroides fragilis NCTC 9343, complete genome
          Length = 5205140

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 81      agaaaagaatagaaaaaaga 100
               ||||||||||||||||||||
Sbjct: 1593461 agaaaagaatagaaaaaaga 1593442
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>emb|BX571871.1| Photorhabdus luminescens subsp. laumondii TTO1 complete genome; segment
             13/17
          Length = 349944

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 82    gaaaagaatagaaaaaagaataca 105
             ||||||||||||||||| ||||||
Sbjct: 94321 gaaaagaatagaaaaaacaataca 94344
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>gb|AC090459.6| Homo sapiens chromosome 18, clone RP11-125E6, complete sequence
          Length = 146310

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 84     aaagaatagaaaaaagaata 103
              ||||||||||||||||||||
Sbjct: 143765 aaagaatagaaaaaagaata 143784
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>gb|AC099845.2| Homo sapiens chromosome 18, clone RP11-812D21, complete sequence
          Length = 189559

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 84     aaagaatagaaaaaagaata 103
              ||||||||||||||||||||
Sbjct: 117185 aaagaatagaaaaaagaata 117166
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>gb|AC007268.5| Arabidopsis thaliana chromosome 2 clone T27D6 map PR1, complete
             sequence
          Length = 89685

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 93    aaaaaagaatacagatcttg 112
             ||||||||||||||||||||
Sbjct: 41220 aaaaaagaatacagatcttg 41239
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 85       aagaatagaaaaaagaatac 104
                ||||||||||||||||||||
Sbjct: 15376235 aagaatagaaaaaagaatac 15376254
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                   
Query: 198     tttgcagatggggcaccagttcttctgccggagcca 233
               |||||| || || |||||||||||||||| ||||||
Sbjct: 2795248 tttgcatattggacaccagttcttctgcctgagcca 2795213
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>gb|AC103777.14| Homo sapiens chromosome 8, clone RP11-460G23, complete sequence
          Length = 164588

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 119   gacatttcaggagaatctgt 138
             ||||||||||||||||||||
Sbjct: 86169 gacatttcaggagaatctgt 86150
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>gb|AC087544.2|AC087544 Oryza sativa (japonica cultivar-group) chromosome 10 clone nbxb0046P18,
             complete sequence
          Length = 144720

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 85    aagaatagaaaaaagaatac 104
             ||||||||||||||||||||
Sbjct: 93598 aagaatagaaaaaagaatac 93617
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>gb|AC007251.4| Homo sapiens BAC clone RP11-373G23 from 2, complete sequence
          Length = 180964

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 85     aagaatagaaaaaagaatacagat 108
              ||||||||||||| ||||||||||
Sbjct: 177591 aagaatagaaaaatgaatacagat 177614
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>gb|AC090644.2| Homo sapiens chromosome 3 clone RP11-322M13 map 3p, complete sequence
          Length = 201414

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 137   gtttacactaaacaagcaga 156
             ||||||||||||||||||||
Sbjct: 36047 gtttacactaaacaagcaga 36028
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>gb|AC027689.10|AC027689 Homo sapiens chromosome 18 clone RP11-245A17, complete sequence
          Length = 180573

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 81     agaaaagaatagaaaaaaga 100
              ||||||||||||||||||||
Sbjct: 154912 agaaaagaatagaaaaaaga 154893
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>dbj|AP006841.1| Bacteroides fragilis YCH46 DNA, complete genome
          Length = 5277274

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 81      agaaaagaatagaaaaaaga 100
               ||||||||||||||||||||
Sbjct: 1632148 agaaaagaatagaaaaaaga 1632129
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>dbj|AP005412.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBa0050G13
          Length = 150685

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                 
Query: 198   tttgcagatggggcaccagttcttctgccggagcca 233
             |||||| || || |||||||||||||||| ||||||
Sbjct: 63476 tttgcatattggacaccagttcttctgcctgagcca 63441
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>emb|CR848035.7| Zebrafish DNA sequence from clone CH211-203J1 in linkage group 12,
             complete sequence
          Length = 143674

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 40    aagacaagaagtcttgaaggcaca 63
             ||||||||||||||| ||||||||
Sbjct: 77302 aagacaagaagtcttaaaggcaca 77279
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>gb|AY104424.1| Zea mays PCO061312 mRNA sequence
          Length = 1386

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 199  ttgcagatggggcaccagttcttc 222
            ||||||||||||||| ||||||||
Sbjct: 1368 ttgcagatggggcacaagttcttc 1345
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>emb|AL357153.4|CNS05TDV Human chromosome 14 DNA sequence BAC C-2540L5 of library CalTech-D from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 209483

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 83     aaaagaatagaaaaaagaat 102
              ||||||||||||||||||||
Sbjct: 175547 aaaagaatagaaaaaagaat 175566
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>dbj|AP005713.2| Homo sapiens genomic DNA, chromosome 8q24, clone: KB262G12, complete
              sequence
          Length = 126698

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 119    gacatttcaggagaatctgt 138
              ||||||||||||||||||||
Sbjct: 106443 gacatttcaggagaatctgt 106424
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 85       aagaatagaaaaaagaatac 104
                ||||||||||||||||||||
Sbjct: 15384476 aagaatagaaaaaagaatac 15384495
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>emb|AL929277.9| Mouse DNA sequence from clone RP23-153J22 on chromosome 4, complete
              sequence
          Length = 144310

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 55     gaaggcacaaacaaatgttt 74
              ||||||||||||||||||||
Sbjct: 129598 gaaggcacaaacaaatgttt 129617
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>gb|U41104.2| Caenorhabditis elegans cosmid T12C9, complete sequence
          Length = 31972

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 84    aaagaatagaaaaaagaata 103
             ||||||||||||||||||||
Sbjct: 15215 aaagaatagaaaaaagaata 15234
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>dbj|AP001578.3| Homo sapiens genomic DNA, chromosome 6q25.2, clone:KB1954F7
          Length = 239057

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 81    agaaaagaatagaaaaaaga 100
             ||||||||||||||||||||
Sbjct: 74307 agaaaagaatagaaaaaaga 74288
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>dbj|AP005120.2| Homo sapiens genomic DNA, chromosome 18p clone:RP11-513M1, complete
             sequences
          Length = 125561

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 81    agaaaagaatagaaaaaaga 100
             ||||||||||||||||||||
Sbjct: 40281 agaaaagaatagaaaaaaga 40300


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,855,090
Number of Sequences: 3902068
Number of extensions: 3855090
Number of successful extensions: 87510
Number of sequences better than 10.0: 57
Number of HSP's better than 10.0 without gapping: 57
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 87151
Number of HSP's gapped (non-prelim): 359
length of query: 374
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 352
effective length of database: 17,147,199,772
effective search space: 6035814319744
effective search space used: 6035814319744
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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