ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbah61l12
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1CIPK1_ORYSA (Q6X4A2) CIPK-like protein 1 (EC 2.7.11.1) (OsCK1) 78 2e-14
2CPK24_ARATH (Q9LDI3) CBL-interacting serine/threonine-protein ki... 73 7e-13
3CPK15_ARATH (P92937) CBL-interacting serine/threonine-protein ki... 71 2e-12
4CIPK1_ARATH (Q8RWC9) CBL-interacting serine/threonine-protein ki... 62 1e-09
5CPK11_ARATH (O22932) CBL-interacting serine/threonine-protein ki... 53 7e-07
6FILA_HUMAN (P20930) Filaggrin 35 0.16
7RPOB_DEHSC (Q3ZX01) DNA-directed RNA polymerase beta chain (EC 2... 33 0.45
8RPOB_DEHE1 (Q3Z8V4) DNA-directed RNA polymerase beta chain (EC 2... 33 0.45
9DYIN_DROME (Q24246) Dynein intermediate chain, cytosolic (DH IC)... 31 2.9
10GLNA_GIBFU (Q9C2U9) Glutamine synthetase (EC 6.3.1.2) (Glutamate... 31 2.9
11ZN688_HUMAN (Q8WV14) Zinc finger protein 688 30 3.8
12Y047_MYCBO (P59967) Hypothetical protein Mb0047c 30 3.8
13Y046_MYCTU (P71703) Hypothetical protein Rv0046c/MT0052 30 3.8
14RPOB_CARHZ (Q3A9Q7) DNA-directed RNA polymerase beta chain (EC 2... 30 6.5
15GLNA_COLGL (Q12613) Glutamine synthetase (EC 6.3.1.2) (Glutamate... 30 6.5
16CYSK2_BRAJU (O23735) Cysteine synthase (EC 2.5.1.47) (O-acetylse... 30 6.5
17DDL_BORPE (Q7VUQ5) D-alanine--D-alanine ligase (EC 6.3.2.4) (D-a... 30 6.5
18DDL_BORPA (Q7W4B6) D-alanine--D-alanine ligase (EC 6.3.2.4) (D-a... 30 6.5
19DDL_BORBR (Q7WFS4) D-alanine--D-alanine ligase (EC 6.3.2.4) (D-a... 30 6.5
20GLNA_FUSSH (Q9UUN6) Glutamine synthetase (EC 6.3.1.2) (Glutamate... 29 8.5
21RIR4_ECOLI (P37146) Ribonucleoside-diphosphate reductase 2 beta ... 29 8.5
22MYH7_RAT (P02564) Myosin heavy chain, cardiac muscle beta isofor... 29 8.5
23MYH7_PIG (P79293) Myosin heavy chain, cardiac muscle beta isofor... 29 8.5
24REX_THEAQ (Q9X2V5) Redox-sensing transcriptional repressor rex 29 8.5
25LATA_LATMA (P23631) Alpha-latrotoxin precursor (Alpha-LTX) 29 8.5

>CIPK1_ORYSA (Q6X4A2) CIPK-like protein 1 (EC 2.7.11.1) (OsCK1)|
          Length = 449

 Score = 78.2 bits (191), Expect = 2e-14
 Identities = 40/107 (37%), Positives = 67/107 (62%), Gaps = 3/107 (2%)
 Frame = -3

Query: 570 SMNAFDIIASSPSFDLSGLFEERGE---QLRFVSSAPVNTIISKLEEIAGQVSFTARTKD 400
           SMNAF++I+ + + +L  LFE + E   + RF S  P   II+K+EE A  + F  + K+
Sbjct: 317 SMNAFELISLNQALNLDNLFEAKKEYKRETRFTSQCPPKEIITKIEEAAKPLGFDIQKKN 376

Query: 399 CQVSFEATRNGHKGALAISTKIFQLTPELVMVQVCKKAGDTAEYRQF 259
            ++  E  + G KG L ++T++FQ+ P L +V++ K  GDT E+++F
Sbjct: 377 YKMRMENLKAGRKGNLNVATEVFQVAPSLHVVELKKAKGDTLEFQKF 423



to top

>CPK24_ARATH (Q9LDI3) CBL-interacting serine/threonine-protein kinase 24 (EC|
           2.7.11.1) (SNF1-related kinase 3.11) (SALT OVERLY
           SENSITIVE 2 protein)
          Length = 446

 Score = 72.8 bits (177), Expect = 7e-13
 Identities = 44/135 (32%), Positives = 74/135 (54%), Gaps = 7/135 (5%)
 Frame = -3

Query: 567 MNAFDIIASSPSFDLSGLFEERGE----QLRFVSSAPVNTIISKLEEIAGQVSFTARTKD 400
           MNAF++I  S   +LS LF+ R +    Q RFVS    + II+ +E +A  + F + T++
Sbjct: 310 MNAFEMITLSQGLNLSALFDRRQDFVKRQTRFVSRREPSEIIANIEAVANSMGFKSHTRN 369

Query: 399 CQVSFEATRNGHKGALAISTKIFQLTPELVMVQVCKKAGDTAEYRQF---CGSELKPGLR 229
            +   E   +   G LA+  +I+++ P L MV V K AG+T EY +F     S+L+  + 
Sbjct: 370 FKTRLEGLSSIKAGQLAVVIEIYEVAPSLFMVDVRKAAGETLEYHKFYKKLCSKLENIIW 429

Query: 228 GLVDGLPEDGLPPTV 184
              +G+P+  +  T+
Sbjct: 430 RATEGIPKSEILRTI 444



to top

>CPK15_ARATH (P92937) CBL-interacting serine/threonine-protein kinase 15 (EC|
           2.7.11.1) (Serine/threonine-protein kinase ATPK10)
           (SOS2-like protein kinase PKS3) (SOS-interacting protein
           2) (SNF1-related kinase 3.1)
          Length = 421

 Score = 71.2 bits (173), Expect = 2e-12
 Identities = 43/119 (36%), Positives = 65/119 (54%), Gaps = 6/119 (5%)
 Frame = -3

Query: 570 SMNAFDIIASSPSFDLSGLFE--ERGEQLRFVSSAPVNTIISKLEEIAGQVSFTARTKD- 400
           ++NAF+II+ S  FDLSGLFE  E  E++RF S+   + I  KL EI   +    R K+ 
Sbjct: 303 NLNAFEIISLSTGFDLSGLFEKGEEKEEMRFTSNREASEITEKLVEIGKDLKMKVRKKEH 362

Query: 399 ---CQVSFEATRNGHKGALAISTKIFQLTPELVMVQVCKKAGDTAEYRQFCGSELKPGL 232
               ++S EAT         +  ++F++ P   MV + K  GDTAEY++     ++P L
Sbjct: 363 EWRVKMSAEAT--------VVEAEVFEIAPSYHMVVLKKSGGDTAEYKRVMKESIRPAL 413



to top

>CIPK1_ARATH (Q8RWC9) CBL-interacting serine/threonine-protein kinase 1 (EC|
           2.7.11.1) (SOS2-like protein kinase PKS13) (SNF1-related
           kinase 3.16)
          Length = 444

 Score = 62.0 bits (149), Expect = 1e-09
 Identities = 33/114 (28%), Positives = 61/114 (53%), Gaps = 5/114 (4%)
 Frame = -3

Query: 567 MNAFDIIASSPSFDLSGLFEERG---EQLRFVSSAPVNTIISKLEEIAGQVSFTARTKDC 397
           +NAF +I  S   DLSG FE+      ++RF S++    ++ K+E    ++ F+ + K  
Sbjct: 318 INAFQLIGMSSFLDLSGFFEQENVSERRIRFTSNSSAKDLLEKIETAVTEMGFSVQKKHA 377

Query: 396 QVSFEATRNGHKG--ALAISTKIFQLTPELVMVQVCKKAGDTAEYRQFCGSELK 241
           ++  +      KG   L+++ ++F++ P L +V++ K  GD+  YRQ     LK
Sbjct: 378 KLRVKQEERNQKGQVGLSVTAEVFEIKPSLNVVELRKSYGDSCLYRQLYERLLK 431



to top

>CPK11_ARATH (O22932) CBL-interacting serine/threonine-protein kinase 11 (EC|
           2.7.11.1) (SOS2-like protein kinase PKS5)
           (SOS-interacting protein 4) (SNF1-related kinase 3.22)
          Length = 435

 Score = 52.8 bits (125), Expect = 7e-07
 Identities = 36/124 (29%), Positives = 59/124 (47%), Gaps = 4/124 (3%)
 Frame = -3

Query: 576 IKSMNAFDIIASSPSFDLSGLF----EERGEQLRFVSSAPVNTIISKLEEIAGQVSFTAR 409
           +KS+NAFD+I+ S   DLSGLF       GE  RF+S      +  ++E  A + +   +
Sbjct: 304 VKSLNAFDLISYSSGLDLSGLFAGCSNSSGESERFLSEKSPEMLAEEVEGFAREENLRMK 363

Query: 408 TKDCQVSFEATRNGHKGALAISTKIFQLTPELVMVQVCKKAGDTAEYRQFCGSELKPGLR 229
            K  +  +     G  G   I   I +L   LV+V+  ++ GD   Y++    +L+  L 
Sbjct: 364 KKK-EEEYGFEMEGQNGKFGIGICISRLNDLLVVVEARRRGGDGDCYKEMWNGKLRVQLI 422

Query: 228 GLVD 217
            + D
Sbjct: 423 RVCD 426



to top

>FILA_HUMAN (P20930) Filaggrin|
          Length = 4061

 Score = 35.0 bits (79), Expect = 0.16
 Identities = 30/95 (31%), Positives = 42/95 (44%), Gaps = 3/95 (3%)
 Frame = -2

Query: 457  HLQARGDRRAG*LHGAHQGLPSELRGDKKWAQGSAGHIHQDIPAHAGARHGPGMQ---ES 287
            H ++  + RAG  H A +   S  R  +  + G A   H+   +  G RHG   Q   +S
Sbjct: 3253 HPRSHHEDRAGHGHSADRSRQSGTRHAETSSGGQAASSHEQARSSPGERHGSRHQQSADS 3312

Query: 286  RRHS*IPAILRQ*AQAWSSRSRGWPA*GWPSPDGE 182
             RHS IP   R  A +    SR W + G  + D E
Sbjct: 3313 SRHSGIP---RGQASSAVRDSRHWGSSGSQASDSE 3344



 Score = 32.0 bits (71), Expect = 1.3
 Identities = 21/65 (32%), Positives = 29/65 (44%), Gaps = 4/65 (6%)
 Frame = -2

Query: 457 HLQARGDRRAG*LHGAHQGLPSELRGDKKWAQGSAGHIHQDIPAHAGARHGPGMQ----E 290
           H ++  + RAG  H A     S  R  +  + G A   H+   + AG RHG   Q    +
Sbjct: 659 HPRSHHEDRAGHGHSADSSRKSGTRHTQNSSSGQAASSHEQARSSAGERHGSRHQLQSAD 718

Query: 289 SRRHS 275
           S RHS
Sbjct: 719 SSRHS 723



 Score = 31.2 bits (69), Expect = 2.2
 Identities = 21/64 (32%), Positives = 29/64 (45%), Gaps = 3/64 (4%)
 Frame = -2

Query: 457  HLQARGDRRAG*LHGAHQGLPSELRGDKKWAQGSAGHIHQDIPAHAGARHGPGMQ---ES 287
            H ++  + RAG  H A     S  R  +  + G A   H+   + AG RHG   Q   +S
Sbjct: 2929 HPRSHQEDRAGHGHSADSSRQSGTRHTQTSSGGQAASSHEQARSSAGERHGSHHQQSADS 2988

Query: 286  RRHS 275
             RHS
Sbjct: 2989 SRHS 2992



 Score = 31.2 bits (69), Expect = 2.2
 Identities = 21/64 (32%), Positives = 29/64 (45%), Gaps = 3/64 (4%)
 Frame = -2

Query: 457  HLQARGDRRAG*LHGAHQGLPSELRGDKKWAQGSAGHIHQDIPAHAGARHGPGMQ---ES 287
            H ++  + RAG  H A     S  R  +  + G A   H+   + AG RHG   Q   +S
Sbjct: 2605 HPRSHQEDRAGHGHSADSSRQSGTRHTQTSSGGQAASSHEQARSSAGERHGSHHQQSADS 2664

Query: 286  RRHS 275
             RHS
Sbjct: 2665 SRHS 2668



 Score = 31.2 bits (69), Expect = 2.2
 Identities = 21/65 (32%), Positives = 29/65 (44%), Gaps = 4/65 (6%)
 Frame = -2

Query: 457  HLQARGDRRAG*LHGAHQGLPSELRGDKKWAQGSAGHIHQDIPAHAGARHGPGMQ----E 290
            H  +  + RAG  H A     S  R  +  ++G A   H+   + AG RHG   Q    +
Sbjct: 1956 HPGSHHEDRAGHGHSADSSRQSGTRHTESSSRGQAASSHEQARSSAGERHGSHHQLQSAD 2015

Query: 289  SRRHS 275
            S RHS
Sbjct: 2016 SSRHS 2020



 Score = 30.4 bits (67), Expect = 3.8
 Identities = 28/95 (29%), Positives = 40/95 (42%), Gaps = 3/95 (3%)
 Frame = -2

Query: 457  HLQARGDRRAG*LHGAHQGLPSELRGDKKWAQGSAGHIHQDIPAHAGARHGPGMQ---ES 287
            H ++  + RAG  H A     S     +  + G A   H+   +  G RHG   Q   +S
Sbjct: 984  HPRSHHEDRAGHGHSADSSRQSGTPHAETSSGGQAASSHEQARSSPGERHGSRHQQSADS 1043

Query: 286  RRHS*IPAILRQ*AQAWSSRSRGWPA*GWPSPDGE 182
             RHS IP   R+ A +    S  W + G  + D E
Sbjct: 1044 SRHSGIP---RRQASSAVRDSGHWGSSGSQASDSE 1075



 Score = 29.6 bits (65), Expect = 6.5
 Identities = 20/64 (31%), Positives = 28/64 (43%), Gaps = 3/64 (4%)
 Frame = -2

Query: 457  HLQARGDRRAG*LHGAHQGLPSELRGDKKWAQGSAGHIHQDIPAHAGARHGPGMQ---ES 287
            H ++  + RAG  H A     S     +  + G A   H+   + AG RHG   Q   +S
Sbjct: 2281 HPRSHHEDRAGHGHSAESSRQSGTHHAENSSGGQAASSHEQARSSAGERHGSHHQQSADS 2340

Query: 286  RRHS 275
             RHS
Sbjct: 2341 SRHS 2344



 Score = 29.6 bits (65), Expect = 6.5
 Identities = 19/64 (29%), Positives = 28/64 (43%), Gaps = 3/64 (4%)
 Frame = -2

Query: 457 HLQARGDRRAG*LHGAHQGLPSELRGDKKWAQGSAGHIHQDIPAHAGARHGPGMQ---ES 287
           H ++  + RA   H A     S  R  +  ++G     H+   +  G RHG G Q   +S
Sbjct: 335 HPRSHDEDRASHGHSADSSRQSGTRHAETSSRGQTASSHEQARSSPGERHGSGHQQSADS 394

Query: 286 RRHS 275
            RHS
Sbjct: 395 SRHS 398



to top

>RPOB_DEHSC (Q3ZX01) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (RNAP|
           beta subunit) (Transcriptase beta chain) (RNA polymerase
           beta subunit)
          Length = 1273

 Score = 33.5 bits (75), Expect = 0.45
 Identities = 19/52 (36%), Positives = 28/52 (53%)
 Frame = +1

Query: 268 VFSCVSGFLAYLDHDELRRELEYLGGYGQRSLVPISCRLEAHLAILGARREA 423
           +FS  +  + +L+HD+  R L  +G   QR  VP+  R EA +   G  REA
Sbjct: 595 IFSVAASLIPFLEHDDANRAL--MGANMQRQAVPL-LRAEAPMVATGMEREA 643



to top

>RPOB_DEHE1 (Q3Z8V4) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (RNAP|
           beta subunit) (Transcriptase beta chain) (RNA polymerase
           beta subunit)
          Length = 1272

 Score = 33.5 bits (75), Expect = 0.45
 Identities = 19/52 (36%), Positives = 28/52 (53%)
 Frame = +1

Query: 268 VFSCVSGFLAYLDHDELRRELEYLGGYGQRSLVPISCRLEAHLAILGARREA 423
           +FS  +  + +L+HD+  R L  +G   QR  VP+  R EA +   G  REA
Sbjct: 595 IFSVAASLIPFLEHDDANRAL--MGANMQRQAVPL-LRAEAPMVATGMEREA 643



to top

>DYIN_DROME (Q24246) Dynein intermediate chain, cytosolic (DH IC) (Cytoplasmic|
           dynein intermediate chain) (Protein short wing)
          Length = 663

 Score = 30.8 bits (68), Expect = 2.9
 Identities = 15/47 (31%), Positives = 23/47 (48%)
 Frame = -3

Query: 498 EQLRFVSSAPVNTIISKLEEIAGQVSFTARTKDCQVSFEATRNGHKG 358
           E L  +  APV+ ++S L  +    S  + T+    S +AT NG  G
Sbjct: 56  EMLSSLGVAPVSEVLSSLSSVNSMTSDNSNTQTPDASLQATVNGQSG 102



to top

>GLNA_GIBFU (Q9C2U9) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia|
           ligase) (GS)
          Length = 353

 Score = 30.8 bits (68), Expect = 2.9
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = -2

Query: 232 SRSRGWPA*GWPSPDGECCLKF*RIYCGVKSSR 134
           +R  GWPA G+P+P GE        YCGV + +
Sbjct: 141 NRPYGWPAGGFPAPQGE-------YYCGVGTGK 166



to top

>ZN688_HUMAN (Q8WV14) Zinc finger protein 688|
          Length = 782

 Score = 30.4 bits (67), Expect = 3.8
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = +3

Query: 348 WPALPCAHFLSPRSSLGNPW 407
           WP++ C  F +PR S  NPW
Sbjct: 155 WPSVACPEFCNPRQSPMNPW 174



to top

>Y047_MYCBO (P59967) Hypothetical protein Mb0047c|
          Length = 367

 Score = 30.4 bits (67), Expect = 3.8
 Identities = 17/58 (29%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
 Frame = -3

Query: 576 IKSMNAFDIIASSPSFDLS-GLFEERGEQLRFVSSAPVNTIISKLEEIAGQVSFTART 406
           +K + AFD+ A    FDLS  +F      ++    AP N I+ +   + G   + A T
Sbjct: 62  VKFVAAFDVDAKKVGFDLSDAIFASENNTIKIADVAPTNVIVQRGPTLDGIGKYYADT 119



to top

>Y046_MYCTU (P71703) Hypothetical protein Rv0046c/MT0052|
          Length = 367

 Score = 30.4 bits (67), Expect = 3.8
 Identities = 17/58 (29%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
 Frame = -3

Query: 576 IKSMNAFDIIASSPSFDLS-GLFEERGEQLRFVSSAPVNTIISKLEEIAGQVSFTART 406
           +K + AFD+ A    FDLS  +F      ++    AP N I+ +   + G   + A T
Sbjct: 62  VKFVAAFDVDAKKVGFDLSDAIFASENNTIKIADVAPTNVIVQRGPTLDGIGKYYADT 119



to top

>RPOB_CARHZ (Q3A9Q7) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (RNAP|
           beta subunit) (Transcriptase beta chain) (RNA polymerase
           beta subunit)
          Length = 1132

 Score = 29.6 bits (65), Expect = 6.5
 Identities = 30/93 (32%), Positives = 41/93 (44%)
 Frame = +1

Query: 145 SPHNKFSKISSNIHRRGKAILRQAIHETSKTRLELTAAELPVFSCVSGFLAYLDHDELRR 324
           SP  KF     N  R G  IL     E SK    +  +   VFS  +  + +L+HD+  R
Sbjct: 517 SPEGKFLDEMVNA-RHGSEILHV---EPSKVDF-VDVSPKQVFSVATSLIPFLEHDDANR 571

Query: 325 ELEYLGGYGQRSLVPISCRLEAHLAILGARREA 423
            L  +G   QR  VP+  R EA +   G   +A
Sbjct: 572 AL--MGANMQRQAVPL-IRTEAPVVGTGIEYKA 601



to top

>GLNA_COLGL (Q12613) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia|
           ligase) (GS)
          Length = 360

 Score = 29.6 bits (65), Expect = 6.5
 Identities = 14/34 (41%), Positives = 19/34 (55%)
 Frame = -2

Query: 235 SSRSRGWPA*GWPSPDGECCLKF*RIYCGVKSSR 134
           S+R  GWPA G+P+P G         YCGV + +
Sbjct: 142 SNRPFGWPANGFPAPQGP-------YYCGVGTGK 168



to top

>CYSK2_BRAJU (O23735) Cysteine synthase (EC 2.5.1.47) (O-acetylserine|
           sulfhydrylase) (O-acetylserine (Thiol)-lyase) (CSase)
           (OAS-TL) (OAS-TL6)
          Length = 324

 Score = 29.6 bits (65), Expect = 6.5
 Identities = 16/52 (30%), Positives = 26/52 (50%)
 Frame = -3

Query: 369 GHKGALAISTKIFQLTPELVMVQVCKKAGDTAEYRQFCGSELKPGLRGLVDG 214
           G KGA+A + +I   TP   M+Q  +   +   + +  G E+  G  G +DG
Sbjct: 126 GMKGAIAKAEEILAKTPNGYMLQQFENPANPKIHYETTGPEIWKGTEGKIDG 177



to top

>DDL_BORPE (Q7VUQ5) D-alanine--D-alanine ligase (EC 6.3.2.4) (D-alanylalanine|
           synthetase) (D-Ala-D-Ala ligase)
          Length = 316

 Score = 29.6 bits (65), Expect = 6.5
 Identities = 19/62 (30%), Positives = 28/62 (45%)
 Frame = +1

Query: 322 RELEYLGGYGQRSLVPISCRLEAHLAILGARREANLPXXXXXXXXXXVHGRAGHETQLLA 501
           RE+  + G G    + +S  ++AHL   G R  A+L           +HGR G +  L  
Sbjct: 19  REVSLMSGKGVHEAL-LSAGVDAHLFDTGERSLADLAAAGFERVFIALHGRYGEDGTLQG 77

Query: 502 AL 507
           AL
Sbjct: 78  AL 79



to top

>DDL_BORPA (Q7W4B6) D-alanine--D-alanine ligase (EC 6.3.2.4) (D-alanylalanine|
           synthetase) (D-Ala-D-Ala ligase)
          Length = 316

 Score = 29.6 bits (65), Expect = 6.5
 Identities = 19/62 (30%), Positives = 28/62 (45%)
 Frame = +1

Query: 322 RELEYLGGYGQRSLVPISCRLEAHLAILGARREANLPXXXXXXXXXXVHGRAGHETQLLA 501
           RE+  + G G    + +S  ++AHL   G R  A+L           +HGR G +  L  
Sbjct: 19  REVSLMSGKGVHEAL-LSAGVDAHLFDTGERSLADLAAAGFERVFIALHGRYGEDGTLQG 77

Query: 502 AL 507
           AL
Sbjct: 78  AL 79



to top

>DDL_BORBR (Q7WFS4) D-alanine--D-alanine ligase (EC 6.3.2.4) (D-alanylalanine|
           synthetase) (D-Ala-D-Ala ligase)
          Length = 316

 Score = 29.6 bits (65), Expect = 6.5
 Identities = 19/62 (30%), Positives = 28/62 (45%)
 Frame = +1

Query: 322 RELEYLGGYGQRSLVPISCRLEAHLAILGARREANLPXXXXXXXXXXVHGRAGHETQLLA 501
           RE+  + G G    + +S  ++AHL   G R  A+L           +HGR G +  L  
Sbjct: 19  REVSLMSGKGVHEAL-LSAGVDAHLFDTGERSLADLAAAGFERVFIALHGRYGEDGTLQG 77

Query: 502 AL 507
           AL
Sbjct: 78  AL 79



to top

>GLNA_FUSSH (Q9UUN6) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia|
           ligase) (GS)
          Length = 356

 Score = 29.3 bits (64), Expect = 8.5
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = -2

Query: 232 SRSRGWPA*GWPSPDGECCLKF*RIYCGVKSSR 134
           +R  GWP  G+P+P GE        YCGV + +
Sbjct: 143 NRPYGWPTGGFPAPQGE-------YYCGVGTGK 168



to top

>RIR4_ECOLI (P37146) Ribonucleoside-diphosphate reductase 2 beta subunit (EC|
           1.17.4.1) (Ribonucleotide reductase 2) (R2F protein)
          Length = 319

 Score = 29.3 bits (64), Expect = 8.5
 Identities = 19/47 (40%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
 Frame = +2

Query: 425 TCPAISSSLEMMVFTGA--LDTKRNCSPRSSNSPDRSKLGEEAMMSN 559
           T   +   L M VFTG   LDT +N     S  PD     EEA++SN
Sbjct: 47  TLTVVEQQLTMRVFTGLTLLDTLQNVIGAPSLMPDALTPHEEAVLSN 93



to top

>MYH7_RAT (P02564) Myosin heavy chain, cardiac muscle beta isoform (MyHC-beta)|
          Length = 1935

 Score = 29.3 bits (64), Expect = 8.5
 Identities = 17/45 (37%), Positives = 27/45 (60%), Gaps = 3/45 (6%)
 Frame = +1

Query: 211  QAIHETSKTRLELTAAELPVFSCVSGFLAYLDHDE---LRRELEY 336
            ++IHE  K R +L A +L + S +    A L+H+E   LR +LE+
Sbjct: 1521 KSIHELEKIRKQLEAEKLELQSALEEAEASLEHEEGKILRAQLEF 1565



to top

>MYH7_PIG (P79293) Myosin heavy chain, cardiac muscle beta isoform (MyHC-beta)|
          Length = 1935

 Score = 29.3 bits (64), Expect = 8.5
 Identities = 17/45 (37%), Positives = 26/45 (57%), Gaps = 3/45 (6%)
 Frame = +1

Query: 211  QAIHETSKTRLELTAAELPVFSCVSGFLAYLDHDE---LRRELEY 336
            + IHE  K R +L A +L + S +    A L+H+E   LR +LE+
Sbjct: 1521 KTIHELEKVRKQLEAEKLELQSALEESEASLEHEEGKILRAQLEF 1565



to top

>REX_THEAQ (Q9X2V5) Redox-sensing transcriptional repressor rex|
          Length = 211

 Score = 29.3 bits (64), Expect = 8.5
 Identities = 24/76 (31%), Positives = 34/76 (44%), Gaps = 3/76 (3%)
 Frame = +1

Query: 211 QAIHETSKTRLELTAAELPVFSCVSGFLAYLDHDELRRELEYLGGYGQRSL---VPISCR 381
           Q +H TS  +L              G LA +   ++R++L Y G YG R +   VP+  R
Sbjct: 24  QGVHRTSSEQL--------------GELAQVTAFQVRKDLSYFGSYGTRGVGYTVPVLKR 69

Query: 382 LEAHLAILGARREANL 429
              H  ILG  R+  L
Sbjct: 70  ELRH--ILGLNRKWGL 83



to top

>LATA_LATMA (P23631) Alpha-latrotoxin precursor (Alpha-LTX)|
          Length = 1401

 Score = 29.3 bits (64), Expect = 8.5
 Identities = 15/57 (26%), Positives = 28/57 (49%)
 Frame = +1

Query: 196  KAILRQAIHETSKTRLELTAAELPVFSCVSGFLAYLDHDELRRELEYLGGYGQRSLV 366
            K +++  I  T +   + TA ++ + +  S  + YL     +   EY   YG+RSL+
Sbjct: 1155 KLLIKYGIDVTIRNAYDKTALDIAIDAKFSNIVEYLKTKSGKFRREYKSSYGERSLL 1211


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 75,268,668
Number of Sequences: 219361
Number of extensions: 1448795
Number of successful extensions: 4117
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 3967
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4106
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 4929664480
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
to top