ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbah61l11 |
|---|---|
| Clone Library Name | barley_pub |
>BGAL_PSEHA (P81650) Beta-galactosidase (EC 3.2.1.23) (Lactase)| (Beta-D-galactoside galactohydrolase) Length = 1038 Score = 82.0 bits (201), Expect(2) = 5e-21 Identities = 41/105 (39%), Positives = 60/105 (57%) Frame = -1 Query: 585 VEDLHVPYIVPGECGARADVRWVALKNADGFGLFASTHGESPPMQASASYYGSVELDRAT 406 + +L+ PYI P + G R+D + +++ N G F +AS Y L +A Sbjct: 934 LNELYTPYIFPTDNGLRSDCQLLSINNLIVTGAFLF----------AASEYSQNMLTQAK 983 Query: 405 HQHKLTKGDDIEVHLDHRHMGVGGDDSWTPCVHEEYLLPPASYRF 271 H ++L D I VH+DH+HMGVGGDDSW+P H+EYLL +Y + Sbjct: 984 HTNELIADDCIHVHIDHQHMGVGGDDSWSPSTHKEYLLEQKNYNY 1028 Score = 38.9 bits (89), Expect(2) = 5e-21 Identities = 16/24 (66%), Positives = 17/24 (70%) Frame = -3 Query: 667 VTWYGRGPFECYPDRKAAAHVGVY 596 V W G GPFE YPDRK+AA G Y Sbjct: 907 VNWLGLGPFENYPDRKSAARFGYY 930
>BGAL_BACME (O52847) Beta-galactosidase (EC 3.2.1.23) (Lactase)| Length = 1034 Score = 74.3 bits (181), Expect(2) = 3e-17 Identities = 37/104 (35%), Positives = 53/104 (50%) Frame = -1 Query: 603 ACTESGVEDLHVPYIVPGECGARADVRWVALKNADGFGLFASTHGESPPMQASASYYGSV 424 A + V++ PY+ P ECG + DVRW + N G G P ++ +A Y Sbjct: 919 ALHKGSVKEQVTPYLRPQECGNKTDVRWATITNDQGRGFLIKG---LPTVELNALPYSPF 975 Query: 423 ELDRATHQHKLTKGDDIEVHLDHRHMGVGGDDSWTPCVHEEYLL 292 EL+ H +KL D + V ++++ MGVGGDDSW H Y L Sbjct: 976 ELEAYDHFYKLPASDSVTVRVNYKQMGVGGDDSWQAKTHPNYTL 1019 Score = 33.5 bits (75), Expect(2) = 3e-17 Identities = 13/24 (54%), Positives = 17/24 (70%) Frame = -3 Query: 667 VTWYGRGPFECYPDRKAAAHVGVY 596 +TWYGRGP E Y DRK A + ++ Sbjct: 898 LTWYGRGPHENYWDRKTGAKLALH 921
>BGAL_THEMA (Q56307) Beta-galactosidase (EC 3.2.1.23) (Lactase)| Length = 1084 Score = 70.1 bits (170), Expect(2) = 5e-15 Identities = 40/98 (40%), Positives = 54/98 (55%) Frame = -1 Query: 564 YIVPGECGARADVRWVALKNADGFGLFASTHGESPPMQASASYYGSVELDRATHQHKLTK 385 Y+ P E G R+DVRW AL + + LF S P + S + +L+R H +L + Sbjct: 883 YVRPQETGNRSDVRWFALSDGET-KLFVSG---MPQIDFSVWPFSMEDLERVQHISELPE 938 Query: 384 GDDIEVHLDHRHMGVGGDDSWTPCVHEEYLLPPASYRF 271 D + V++D R MG+GGDDSW H EY L P YRF Sbjct: 939 RDFVTVNVDFRQMGLGGDDSWGAMPHLEYRLLPKPYRF 976 Score = 30.4 bits (67), Expect(2) = 5e-15 Identities = 12/16 (75%), Positives = 12/16 (75%) Frame = -3 Query: 667 VTWYGRGPFECYPDRK 620 V WYGRGP E Y DRK Sbjct: 849 VEWYGRGPHETYWDRK 864
>BGAL_ENTCL (Q47077) Beta-galactosidase (EC 3.2.1.23) (Lactase)| Length = 1028 Score = 67.0 bits (162), Expect(2) = 1e-14 Identities = 38/105 (36%), Positives = 49/105 (46%) Frame = -1 Query: 585 VEDLHVPYIVPGECGARADVRWVALKNADGFGLFASTHGESPPMQASASYYGSVELDRAT 406 +E +H PYI P E G R D R L H + S S Y +L T Sbjct: 926 LEAMHTPYIFPTENGLRCDTR----------ELVVGMHQLNGHFHFSVSRYSQQQLRETT 975 Query: 405 HQHKLTKGDDIEVHLDHRHMGVGGDDSWTPCVHEEYLLPPASYRF 271 H H L + ++LD HMGVGGDDSW+P V E++L R+ Sbjct: 976 HHHLLREEPGCWLNLDAFHMGVGGDDSWSPSVSPEFILQTRQLRY 1020 Score = 32.3 bits (72), Expect(2) = 1e-14 Identities = 14/22 (63%), Positives = 14/22 (63%) Frame = -3 Query: 667 VTWYGRGPFECYPDRKAAAHVG 602 V W G GP E YPDRK AA G Sbjct: 899 VRWLGLGPHENYPDRKLAAQQG 920
>BGAL_BACHD (Q9K9C6) Beta-galactosidase (EC 3.2.1.23) (Lactase)| Length = 1014 Score = 68.2 bits (165), Expect(2) = 2e-12 Identities = 40/104 (38%), Positives = 61/104 (58%), Gaps = 1/104 (0%) Frame = -1 Query: 600 CT-ESGVEDLHVPYIVPGECGARADVRWVALKNADGFGLFASTHGESPPMQASASYYGSV 424 CT ++ VED Y+ P E G R VR V + +A+G G+ + E P++ S Y + Sbjct: 898 CTFKNKVEDSLSQYVTPQESGNRTGVRTVKILDANGQGIEVCSVEE--PIECQISPYTAF 955 Query: 423 ELDRATHQHKLTKGDDIEVHLDHRHMGVGGDDSWTPCVHEEYLL 292 EL++A+H ++L V++ + MGVGGDDSW VH+EY+L Sbjct: 956 ELEQASHPYELPNVHYTVVNVAGKQMGVGGDDSWGAPVHDEYVL 999 Score = 23.5 bits (49), Expect(2) = 2e-12 Identities = 9/19 (47%), Positives = 10/19 (52%) Frame = -3 Query: 661 WYGRGPFECYPDRKAAAHV 605 WY GP E Y DR A + Sbjct: 879 WYALGPEENYADRATGARL 897
>BGAL_KLEPN (P06219) Beta-galactosidase (EC 3.2.1.23) (Lactase)| Length = 1034 Score = 59.7 bits (143), Expect(2) = 7e-12 Identities = 40/118 (33%), Positives = 56/118 (47%), Gaps = 3/118 (2%) Frame = -1 Query: 615 RRTSACT---ESGVEDLHVPYIVPGECGARADVRWVALKNADGFGLFASTHGESPPMQAS 445 RR+SAC E + + PYI P E G R D + + D S H S Sbjct: 920 RRSSACFARWEQPLAAMTTPYIFPTENGLRCDTQAL-----DWGRWHISGH-----FHFS 969 Query: 444 ASYYGSVELDRATHQHKLTKGDDIEVHLDHRHMGVGGDDSWTPCVHEEYLLPPASYRF 271 + + +L H HK+ D + + LD HMGVGGDDSWTP V ++LL +++ Sbjct: 970 VQPWSTRQLMETDHWHKMQAEDGVWITLDGLHMGVGGDDSWTPSVLPQWLLSQTRWQY 1027 Score = 30.0 bits (66), Expect(2) = 7e-12 Identities = 11/19 (57%), Positives = 15/19 (78%) Frame = -3 Query: 667 VTWYGRGPFECYPDRKAAA 611 V+W G GP E YPDR+++A Sbjct: 906 VSWLGLGPHENYPDRRSSA 924
>BGAL_ECOLI (P00722) Beta-galactosidase (EC 3.2.1.23) (Lactase)| Length = 1023 Score = 60.8 bits (146), Expect(2) = 1e-11 Identities = 36/118 (30%), Positives = 54/118 (45%), Gaps = 3/118 (2%) Frame = -1 Query: 615 RRTSACTESG---VEDLHVPYIVPGECGARADVRWVALKNADGFGLFASTHGESPPMQAS 445 R T+AC + + D++ PY+ P E G R R L H Q + Sbjct: 909 RLTAACFDRWDLPLSDMYTPYVFPSENGLRCGTR----------ELNYGPHQWRGDFQFN 958 Query: 444 ASYYGSVELDRATHQHKLTKGDDIEVHLDHRHMGVGGDDSWTPCVHEEYLLPPASYRF 271 S Y +L +H+H L + +++D HMG+GGDDSW+P V E+ L Y + Sbjct: 959 ISRYSQQQLMETSHRHLLHAEEGTWLNIDGFHMGIGGDDSWSPSVSAEFQLSAGRYHY 1016 Score = 28.1 bits (61), Expect(2) = 1e-11 Identities = 12/19 (63%), Positives = 12/19 (63%) Frame = -3 Query: 667 VTWYGRGPFECYPDRKAAA 611 V W G GP E YPDR AA Sbjct: 895 VNWLGLGPQENYPDRLTAA 913
>BGAL_LACLA (Q48727) Beta-galactosidase (EC 3.2.1.23) (Lactase)| Length = 998 Score = 60.8 bits (146), Expect = 3e-09 Identities = 38/105 (36%), Positives = 55/105 (52%) Frame = -1 Query: 585 VEDLHVPYIVPGECGARADVRWVALKNADGFGLFASTHGESPPMQASASYYGSVELDRAT 406 + D+ PYI P E G R + R + N D + A G+S + S Y +L + Sbjct: 894 ITDMTTPYIFPSENGLRMETREL---NYDRLKVRAM--GQS--FAFNLSPYSQNQLAKKG 946 Query: 405 HQHKLTKGDDIEVHLDHRHMGVGGDDSWTPCVHEEYLLPPASYRF 271 H H L + +++D HMGVGGDDSW+P V +EYLL +Y + Sbjct: 947 HWHLLEEEAGTWLNIDGFHMGVGGDDSWSPSVAQEYLLTKGNYHY 991
>BGAL_LACDE (P20043) Beta-galactosidase (EC 3.2.1.23) (Lactase)| Length = 1006 Score = 48.5 bits (114), Expect(2) = 1e-08 Identities = 33/88 (37%), Positives = 45/88 (51%) Frame = -1 Query: 555 PGECGARADVRWVALKNADGFGLFASTHGESPPMQASASYYGSVELDRATHQHKLTKGDD 376 P E G R+ VRW L + G GL + +G + SA Y + +++ A H +LT + Sbjct: 905 PQETGNRSKVRWYQLFDEKG-GLEFTANGAD--LNLSALPYSAAQIEAADHAFELTN-NY 960 Query: 375 IEVHLDHRHMGVGGDDSWTPCVHEEYLL 292 V MGVGGDDSW VH E+ L Sbjct: 961 TWVRALSAQMGVGGDDSWGQKVHPEFCL 988 Score = 30.0 bits (66), Expect(2) = 1e-08 Identities = 11/22 (50%), Positives = 15/22 (68%) Frame = -3 Query: 661 WYGRGPFECYPDRKAAAHVGVY 596 +YG GP E YPDR ++G+Y Sbjct: 871 YYGLGPNESYPDRLEGNYLGIY 892
>BGA2_ECOLI (P06864) Evolved beta-galactosidase alpha-subunit (EC 3.2.1.23)| (Lactase) Length = 1030 Score = 52.0 bits (123), Expect(2) = 4e-08 Identities = 32/90 (35%), Positives = 46/90 (51%) Frame = -1 Query: 591 SGVEDLHVPYIVPGECGARADVRWVALKNADGFGLFASTHGESPPMQASASYYGSVELDR 412 S V+ + Y P G R VRW AL N G GL P+ SA +Y + Sbjct: 891 STVDAMFENYPFPQNNGNRQHVRWTALTNRHGNGLLVVPQR---PINFSAWHYTQENIHA 947 Query: 411 ATHQHKLTKGDDIEVHLDHRHMGVGGDDSW 322 A H ++L + DDI ++LDH+ +G+ G +SW Sbjct: 948 AQHCNELQRSDDITLNLDHQLLGL-GSNSW 976 Score = 25.0 bits (53), Expect(2) = 4e-08 Identities = 10/24 (41%), Positives = 15/24 (62%) Frame = -3 Query: 667 VTWYGRGPFECYPDRKAAAHVGVY 596 V +YGRGP E Y D + A + ++ Sbjct: 866 VAYYGRGPGENYADSQQANIIDIW 889
>BGAL_STRTR (P23989) Beta-galactosidase (EC 3.2.1.23) (Lactase)| Length = 1026 Score = 55.1 bits (131), Expect = 2e-07 Identities = 32/104 (30%), Positives = 54/104 (51%) Frame = -1 Query: 594 ESGVEDLHVPYIVPGECGARADVRWVALKNADGFGLFASTHGESPPMQASASYYGSVELD 415 E+ VE PY++P E G R + + + GL + ++ + SA + +++ Sbjct: 912 ETSVEKTFAPYLMPQESGNHYGTREFTVSDDNHNGLKFTALNKA--FEFSALRNSTEQIE 969 Query: 414 RATHQHKLTKGDDIEVHLDHRHMGVGGDDSWTPCVHEEYLLPPA 283 A HQ++L + D + + MGVGGDD+W VH+E+LL A Sbjct: 970 NARHQYELQESDATWIKVLAAQMGVGGDDTWGAPVHDEFLLSSA 1013
>BGAL_ARTSB (Q59140) Beta-galactosidase (EC 3.2.1.23) (Lactase)| Length = 1015 Score = 36.2 bits (82), Expect(2) = 1e-04 Identities = 28/94 (29%), Positives = 41/94 (43%), Gaps = 6/94 (6%) Frame = -1 Query: 585 VEDLHVPYIVPGECGARADVRWVALK--NADGFGLFASTHGESPPMQASASYYGSVELDR 412 +E+L+V Y P E G +DVRWV L A + A S + + E+ Sbjct: 903 LEELNVNYARPQETGHHSDVRWVELSRDGAPWLRIEADPDALGRRPGFSLAKNTAQEVAL 962 Query: 411 ATHQHKLTKGDDIEVHLDHRHMGVG----GDDSW 322 A H H+L + ++LD G+G G D W Sbjct: 963 APHPHELPESQHSYLYLDAAQHGLGSRACGPDVW 996 Score = 28.9 bits (63), Expect(2) = 1e-04 Identities = 11/23 (47%), Positives = 15/23 (65%) Frame = -3 Query: 664 TWYGRGPFECYPDRKAAAHVGVY 596 +W+G GP E YPD +A VG + Sbjct: 877 SWFGAGPRESYPDSLHSAVVGTH 899
>BGAM_LEULA (Q02604) Beta-galactosidase small subunit (EC 3.2.1.23) (Lactase)| Length = 319 Score = 40.4 bits (93), Expect = 0.005 Identities = 31/98 (31%), Positives = 41/98 (41%), Gaps = 8/98 (8%) Frame = -1 Query: 567 PYIVPGECGARADVRWVAL------KNADGFGL-FASTHGES-PPMQASASYYGSVELDR 412 PY+VP ECG V + NAD F+ T ++ P S Y + EL+ Sbjct: 206 PYLVPQECGMHMQTEQVTVTRSTTQNNADHDNTPFSLTFSQTDAPFAFSCLPYTAAELEN 265 Query: 411 ATHQHKLTKGDDIEVHLDHRHMGVGGDDSWTPCVHEEY 298 ATH +L + + GVGG DSW V Y Sbjct: 266 ATHMEELPLARRTVLSIYGAVRGVGGIDSWGTDVEAPY 303
>BGAM_LACAC (O07685) Beta-galactosidase small subunit (EC 3.2.1.23) (Lactase)| Length = 316 Score = 37.0 bits (84), Expect = 0.054 Identities = 31/106 (29%), Positives = 44/106 (41%), Gaps = 8/106 (7%) Frame = -1 Query: 564 YIVPGECGARADVRWV------ALKNADGFGLFA-STHGESPPMQASASYYGSVELDRAT 406 Y+VP E G + + L NAD F+ + P S Y + EL+ AT Sbjct: 206 YLVPQENGMHMQTKALKITRSSTLNNADQESEFSLKLKQDKQPFNFSCLPYTAEELENAT 265 Query: 405 HQHKLTKGDDIEVHLDHRHMGVGGDDSWTPCVHEEY-LLPPASYRF 271 H +L + + GVGG DSW V ++Y + P Y F Sbjct: 266 HLEELPLARRTVLVIAGAVRGVGGIDSWGADVEKQYHINPEKDYEF 311
>BGAM_LACSK (Q48847) Beta-galactosidase small subunit (EC 3.2.1.23) (Lactase)| Length = 318 Score = 37.0 bits (84), Expect = 0.054 Identities = 28/98 (28%), Positives = 37/98 (37%), Gaps = 8/98 (8%) Frame = -1 Query: 567 PYIVPGECGARADVRWVALKNADGFGLFASTHGES--------PPMQASASYYGSVELDR 412 PY+VP +CG WV + E+ P S Y + EL+ Sbjct: 205 PYLVPQDCGVHMATDWVTIYRQAVLDNCLHEPVETGLKFKMVDQPFAFSCLPYTAEELEN 264 Query: 411 ATHQHKLTKGDDIEVHLDHRHMGVGGDDSWTPCVHEEY 298 ATH +L ++L GVGG DSW V Y Sbjct: 265 ATHHSELPAPHRTVLNLLGAVRGVGGIDSWGSDVEVAY 302
>BGAL_STAXY (O33815) Beta-galactosidase (EC 3.2.1.23) (Lactase)| Length = 994 Score = 28.9 bits (63), Expect(2) = 0.11 Identities = 22/91 (24%), Positives = 42/91 (46%) Frame = -1 Query: 564 YIVPGECGARADVRWVALKNADGFGLFASTHGESPPMQASASYYGSVELDRATHQHKLTK 385 +I P E G+ + +V + +DG T + + ++Y +L TH+ L Sbjct: 895 HIRPQETGSHNETTFVEI--SDGCKKVIVTSDNT--FSFNTTHYSLKQLTETTHKDALEP 950 Query: 384 GDDIEVHLDHRHMGVGGDDSWTPCVHEEYLL 292 D +++D+ G+ G +S P ++E Y L Sbjct: 951 EDQTYLYIDYAQSGI-GSNSCGPELNEAYRL 980 Score = 25.8 bits (55), Expect(2) = 0.11 Identities = 9/21 (42%), Positives = 14/21 (66%) Frame = -3 Query: 667 VTWYGRGPFECYPDRKAAAHV 605 V +YG+GPF Y D+ A ++ Sbjct: 861 VKYYGKGPFSSYQDKGVANYL 881
>EZA1_ARATH (Q9ZSM8) Probable Polycomb group protein EZA1 (CURLY LEAF-like 1)| (Protein SET DOMAIN GROUP 10) Length = 856 Score = 33.5 bits (75), Expect = 0.59 Identities = 17/39 (43%), Positives = 19/39 (48%), Gaps = 3/39 (7%) Frame = +3 Query: 321 SSCRPRPPPC---AYDQDAPRCHLPWSACADGSPGRAPR 428 S CR R PC + D C W +C DGS G APR Sbjct: 652 SQCRSRQCPCFAAGRECDPDVCRNCWVSCGDGSLGEAPR 690
>MUC5B_HUMAN (Q9HC84) Mucin-5B precursor (Mucin 5 subtype B, tracheobronchial)| (High molecular weight salivary mucin MG1) (Sublingual gland mucin) Length = 5703 Score = 33.1 bits (74), Expect = 0.78 Identities = 28/94 (29%), Positives = 37/94 (39%) Frame = +2 Query: 320 VQLSSPPTPMCL*SRCTSMSSPLVSLC*WVARSSSTEP**LALACIGGDSPWVEAKRPNP 499 V S TP S+ TS SSP + V S++T+ + P P Sbjct: 2996 VLTSQATTPTATSSKATSSSSPRTATTLPVLTSTATKS-------------TATSFTPIP 3042 Query: 500 SAFLSATHRTSARAPHSPGTMXGTWRSSTPLSVH 601 S+ L T + R PH TM SSTP + H Sbjct: 3043 SSTLGTTGTSQNRPPHPMATMSTIHPSSTPETTH 3076
>BGAL_KLULA (P00723) Beta-galactosidase (EC 3.2.1.23) (Lactase)| Length = 1025 Score = 33.1 bits (74), Expect = 0.78 Identities = 12/22 (54%), Positives = 15/22 (68%) Frame = -3 Query: 661 WYGRGPFECYPDRKAAAHVGVY 596 W GRGP E YPD+K + G+Y Sbjct: 895 WLGRGPGESYPDKKESQRFGLY 916
>PPRB_HUMAN (Q15648) Peroxisome proliferator-activated receptor-binding protein| (PBP) (PPAR-binding protein) (Thyroid hormone receptor-associated protein complex 220 kDa component) (Trap220) (Thyroid receptor-interacting protein 2) (TRIP-2) (p53 regulator Length = 1581 Score = 32.7 bits (73), Expect = 1.0 Identities = 50/212 (23%), Positives = 83/212 (39%), Gaps = 5/212 (2%) Frame = +2 Query: 35 LLIRQTTGTCPVTQPYVYTSESDSNIIVSVSPMISLSHRRASKGRGASXXXXXXXQL--- 205 + I+ GT V +P ++ + S + S SH +S ++ + Sbjct: 1063 ITIQIPKGTVMVGKPSSHSQYTSSGSVSSSGSKSHHSHSSSSSSSASTSGKMKSSKSEGS 1122 Query: 206 GSWEM*MSWHDDDGSRGRSRSENL*LAGGSRYSS--CTHGVQLSSPPTPMCL*SRCTSMS 379 S ++ S + GS G S+S+N +GG SS HG+ S T M + +S+ Sbjct: 1123 SSSKLSSSMYSSQGSSGSSQSKNSSQSGGKPGSSPITKHGLSSGSSSTKMKPQGKPSSLM 1182 Query: 380 SPLVSLC*WVARSSSTEP**LALACIGGDSPWVEAKRPNPSAFLSATHRTSARAPHSPGT 559 +P +S ++ S S P GG +P P S + A++P S G+ Sbjct: 1183 NPSLSKP-NISPSHSRPP--------GGSDKLASPMKPVPGTPPS----SKAKSPISSGS 1229 Query: 560 MXGTWRSSTPLSVHADVRRGLAVGVALERAPP 655 G+ S T S GL +L + P Sbjct: 1230 -GGSHMSGTSSSSGMKSSSGLGSSGSLSQKTP 1260
>BSL3_ARATH (Q9SHS7) Serine/threonine-protein phosphatase BSL3 (EC 3.1.3.16)| (BSU1-like protein 3) Length = 715 Score = 32.7 bits (73), Expect = 1.0 Identities = 25/79 (31%), Positives = 32/79 (40%) Frame = +1 Query: 424 HGAVIAGARLHRRGLAVGRGEKAEPVGVLKRHPPDVRAGAALARDDVXHVEVLHAALCTR 603 H AV ARLH G A+G G E D + A + DD+ E L AA T Sbjct: 252 HAAVFVNARLHVSGGALGGGRMVE----------DSSSVAGVLLDDLLVAEDLAAAETTS 301 Query: 604 RRAPRPCGRGSTRTGPSRT 660 + +T T P R+ Sbjct: 302 AASHAAAAAAATNTPPGRS 320
>Y054_ERWCT (Q6DB47) UPF0341 protein ECA0054| Length = 248 Score = 32.7 bits (73), Expect = 1.0 Identities = 21/43 (48%), Positives = 25/43 (58%), Gaps = 2/43 (4%) Frame = +1 Query: 436 IAGARLHRRGLAVGRGEK-AEPVGVLKRHPPD-VRAGAALARD 558 +AG HRR GRGE A+ VG+ K + PD V A A L RD Sbjct: 60 VAGPMAHRRRFGGGRGEAVAKAVGIKKDYLPDVVDATAGLGRD 102
>DRTS_TRYCR (Q27793) Bifunctional dihydrofolate reductase-thymidylate synthase| (DHFR-TS) [Includes: Dihydrofolate reductase (EC 1.5.1.3); Thymidylate synthase (EC 2.1.1.45)] Length = 521 Score = 31.2 bits (69), Expect = 2.9 Identities = 16/33 (48%), Positives = 19/33 (57%) Frame = +2 Query: 452 CIGGDSPWVEAKRPNPSAFLSATHRTSARAPHS 550 CIGG S + EA RP L A +RT+ RA S Sbjct: 153 CIGGGSVYAEALRPPCVHLLQAIYRTTIRASES 185
>BGAL_CLOAB (P24131) Beta-galactosidase (EC 3.2.1.23) (Lactase)| Length = 897 Score = 30.4 bits (67), Expect = 5.0 Identities = 12/23 (52%), Positives = 15/23 (65%) Frame = -3 Query: 664 TWYGRGPFECYPDRKAAAHVGVY 596 +WYG GP E Y DR A +G+Y Sbjct: 871 SWYGMGPEENYIDRCEGAKLGIY 893
>YHIQ_SHIFL (Q7UAV7) UPF0341 protein yhiQ| Length = 250 Score = 30.4 bits (67), Expect = 5.0 Identities = 20/43 (46%), Positives = 24/43 (55%), Gaps = 2/43 (4%) Frame = +1 Query: 436 IAGARLHRRGLAVGRGEK-AEPVGVLKRHPPD-VRAGAALARD 558 + GA HRR GRGE A+ VG+ + PD V A A L RD Sbjct: 60 VGGAMAHRRKFGGGRGEAVAKAVGIKGDYLPDVVDATAGLGRD 102
>YHIQ_ECOLI (P68567) UPF0341 protein yhiQ| Length = 250 Score = 30.4 bits (67), Expect = 5.0 Identities = 20/43 (46%), Positives = 24/43 (55%), Gaps = 2/43 (4%) Frame = +1 Query: 436 IAGARLHRRGLAVGRGEK-AEPVGVLKRHPPD-VRAGAALARD 558 + GA HRR GRGE A+ VG+ + PD V A A L RD Sbjct: 60 VGGAMAHRRKFGGGRGEAVAKAVGIKGDYLPDVVDATAGLGRD 102
>YHIQ_ECOL6 (Q8FCL1) UPF0341 protein yhiQ| Length = 250 Score = 30.4 bits (67), Expect = 5.0 Identities = 20/43 (46%), Positives = 24/43 (55%), Gaps = 2/43 (4%) Frame = +1 Query: 436 IAGARLHRRGLAVGRGEK-AEPVGVLKRHPPD-VRAGAALARD 558 + GA HRR GRGE A+ VG+ + PD V A A L RD Sbjct: 60 VGGAMAHRRKFGGGRGEAVAKAVGIKGDYLPDVVDATAGLGRD 102
>YHIQ_ECO57 (P68568) UPF0341 protein yhiQ| Length = 250 Score = 30.4 bits (67), Expect = 5.0 Identities = 20/43 (46%), Positives = 24/43 (55%), Gaps = 2/43 (4%) Frame = +1 Query: 436 IAGARLHRRGLAVGRGEK-AEPVGVLKRHPPD-VRAGAALARD 558 + GA HRR GRGE A+ VG+ + PD V A A L RD Sbjct: 60 VGGAMAHRRKFGGGRGEAVAKAVGIKGDYLPDVVDATAGLGRD 102
>YHIQ_SALTY (Q9X6G2) UPF0341 protein yhiQ| Length = 252 Score = 30.4 bits (67), Expect = 5.0 Identities = 20/43 (46%), Positives = 24/43 (55%), Gaps = 2/43 (4%) Frame = +1 Query: 436 IAGARLHRRGLAVGRGEK-AEPVGVLKRHPPD-VRAGAALARD 558 + GA HRR GRGE A+ VG+ + PD V A A L RD Sbjct: 60 VGGAMAHRRKFGGGRGEAVAKAVGIKGDYLPDVVDATAGLGRD 102
>YHIQ_SALTI (Q8Z270) UPF0341 protein yhiQ| Length = 252 Score = 30.4 bits (67), Expect = 5.0 Identities = 20/43 (46%), Positives = 24/43 (55%), Gaps = 2/43 (4%) Frame = +1 Query: 436 IAGARLHRRGLAVGRGEK-AEPVGVLKRHPPD-VRAGAALARD 558 + GA HRR GRGE A+ VG+ + PD V A A L RD Sbjct: 60 VGGAMAHRRKFGGGRGEAVAKAVGIKGDYLPDVVDATAGLGRD 102
>YHIQ_SALPA (Q5PJN8) UPF0341 protein yhiQ| Length = 252 Score = 30.4 bits (67), Expect = 5.0 Identities = 20/43 (46%), Positives = 24/43 (55%), Gaps = 2/43 (4%) Frame = +1 Query: 436 IAGARLHRRGLAVGRGEK-AEPVGVLKRHPPD-VRAGAALARD 558 + GA HRR GRGE A+ VG+ + PD V A A L RD Sbjct: 60 VGGAMAHRRKFGGGRGEAVAKAVGIKGDYLPDVVDATAGLGRD 102
>YHIQ_SALCH (Q57IN4) UPF0341 protein yhiQ| Length = 252 Score = 30.4 bits (67), Expect = 5.0 Identities = 20/43 (46%), Positives = 24/43 (55%), Gaps = 2/43 (4%) Frame = +1 Query: 436 IAGARLHRRGLAVGRGEK-AEPVGVLKRHPPD-VRAGAALARD 558 + GA HRR GRGE A+ VG+ + PD V A A L RD Sbjct: 60 VGGAMAHRRKFGGGRGEAVAKAVGIKGDYLPDVVDATAGLGRD 102
>METF_STRLI (O54235) 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20)| Length = 307 Score = 30.0 bits (66), Expect = 6.6 Identities = 13/21 (61%), Positives = 16/21 (76%) Frame = -3 Query: 460 ADAGERQLLRLRGARPGDPSA 398 ADAG R +L +RG PGDP+A Sbjct: 109 ADAGIRNMLAVRGDPPGDPNA 129
>TAU_PANTR (Q5YCW1) Microtubule-associated protein tau| Length = 775 Score = 30.0 bits (66), Expect = 6.6 Identities = 23/73 (31%), Positives = 32/73 (43%), Gaps = 2/73 (2%) Frame = -1 Query: 663 HGTGGARSSATPTARPRRTSACTESGVEDLHVPYIVP--GECGARADVRWVALKNADGFG 490 H T G S+ P +P + C E +V + P G GA+ + LK ADG Sbjct: 413 HPTPG---SSDPLIQPSSPAVCPEPPSSPKYVSSVTPRTGSSGAKE----MKLKGADGKT 465 Query: 489 LFASTHGESPPMQ 451 A+ G +PP Q Sbjct: 466 KIATPRGAAPPGQ 478
>TAU_GORGO (Q5YCW0) Microtubule-associated protein tau| Length = 775 Score = 30.0 bits (66), Expect = 6.6 Identities = 23/73 (31%), Positives = 32/73 (43%), Gaps = 2/73 (2%) Frame = -1 Query: 663 HGTGGARSSATPTARPRRTSACTESGVEDLHVPYIVP--GECGARADVRWVALKNADGFG 490 H T G S+ P +P + C E +V + P G GA+ + LK ADG Sbjct: 413 HPTPG---SSDPLIQPSSPAVCPEPPSSPKYVSSVTPRTGSSGAKE----MKLKGADGKT 465 Query: 489 LFASTHGESPPMQ 451 A+ G +PP Q Sbjct: 466 KIATPRGAAPPGQ 478
>Y1804_PASMU (Q9CK31) UPF0341 protein PM1804| Length = 252 Score = 30.0 bits (66), Expect = 6.6 Identities = 20/43 (46%), Positives = 24/43 (55%), Gaps = 2/43 (4%) Frame = +1 Query: 436 IAGARLHRRGLAVGRGEK-AEPVGVLKRHPPDV-RAGAALARD 558 +AGA HRR GRGE A+ VG+ + P V A A L RD Sbjct: 64 VAGAMAHRRKFGGGRGEAVAKAVGIKSGYLPTVIDATAGLGRD 106
>TAU_PONPY (Q5S6V2) Microtubule-associated protein tau| Length = 757 Score = 30.0 bits (66), Expect = 6.6 Identities = 23/73 (31%), Positives = 32/73 (43%), Gaps = 2/73 (2%) Frame = -1 Query: 663 HGTGGARSSATPTARPRRTSACTESGVEDLHVPYIVP--GECGARADVRWVALKNADGFG 490 H T G S+ P +P + C E +V + P G GA+ + LK ADG Sbjct: 413 HPTPG---SSDPLIQPSSPAVCPEPPSSPKYVSSVTPRTGSSGAKE----MKLKGADGKT 465 Query: 489 LFASTHGESPPMQ 451 A+ G +PP Q Sbjct: 466 KIATPRGAAPPGQ 478
>AMPM_BACHD (Q9Z9J4) Methionine aminopeptidase (EC 3.4.11.18) (MAP) (Peptidase| M) Length = 248 Score = 30.0 bits (66), Expect = 6.6 Identities = 19/66 (28%), Positives = 31/66 (46%), Gaps = 7/66 (10%) Frame = -1 Query: 486 FASTHGESPPMQASASYYGSV------ELDRATHQHKLTK-GDDIEVHLDHRHMGVGGDD 328 F +HG +P + + GS+ EL +++ K GD I V + ++ G GD Sbjct: 47 FIRSHGATPSFKGYNGFTGSICASVNEELVHGIPGNRVLKEGDIISVDIGAKYNGYHGDS 106 Query: 327 SWTPCV 310 +WT V Sbjct: 107 AWTYAV 112
>BGAM_LACHE (Q7WTB3) Beta-galactosidase small subunit (EC 3.2.1.23) (Lactase)| Length = 318 Score = 29.6 bits (65), Expect = 8.6 Identities = 27/103 (26%), Positives = 39/103 (37%), Gaps = 10/103 (9%) Frame = -1 Query: 564 YIVPGECGARADVRWVAL----------KNADGFGLFASTHGESPPMQASASYYGSVELD 415 Y+VP E G + + + + + F L S P S Y + EL+ Sbjct: 207 YLVPQENGMHMQTKKLTINRETTQNNVDRTNEKFSL--SIQQAEKPFNFSCLPYTAEELE 264 Query: 414 RATHQHKLTKGDDIEVHLDHRHMGVGGDDSWTPCVHEEYLLPP 286 ATH +L + + GVGG DSW V Y + P Sbjct: 265 NATHIEELPLVRRTVLVIAGAVRGVGGIDSWGTDVESAYHINP 307
>Y3974_YERPE (Q8ZA46) UPF0341 protein YPO3974/y3856/YP3336| Length = 256 Score = 29.6 bits (65), Expect = 8.6 Identities = 19/43 (44%), Positives = 25/43 (58%), Gaps = 2/43 (4%) Frame = +1 Query: 436 IAGARLHRRGLAVGRGEK-AEPVGVLKRH-PPDVRAGAALARD 558 ++G + HRR GRGE A+ VG+ K + P V A A L RD Sbjct: 63 VSGTQAHRRKFGGGRGEAVAKAVGIKKGYLPRVVDATAGLGRD 105
>Y3815_YERPS (Q664F4) UPF0341 protein YPTB3815| Length = 256 Score = 29.6 bits (65), Expect = 8.6 Identities = 19/43 (44%), Positives = 25/43 (58%), Gaps = 2/43 (4%) Frame = +1 Query: 436 IAGARLHRRGLAVGRGEK-AEPVGVLKRH-PPDVRAGAALARD 558 ++G + HRR GRGE A+ VG+ K + P V A A L RD Sbjct: 63 VSGTQAHRRKFGGGRGEAVAKAVGIKKGYLPRVVDATAGLGRD 105
>RL21_HAEIN (P44359) 50S ribosomal protein L21| Length = 103 Score = 29.6 bits (65), Expect = 8.6 Identities = 15/41 (36%), Positives = 25/41 (60%) Frame = +1 Query: 394 LVLMGRPVELHGAVIAGARLHRRGLAVGRGEKAEPVGVLKR 516 +V+ G V++ V+AGA++ +A GRGEK + V +R Sbjct: 40 MVVNGEDVKIGAPVVAGAKVVAEVVAQGRGEKVKIVKFRRR 80 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 83,237,315 Number of Sequences: 219361 Number of extensions: 1604525 Number of successful extensions: 5708 Number of sequences better than 10.0: 42 Number of HSP's better than 10.0 without gapping: 5388 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5698 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6484657212 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
