ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbah61l11
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ref|NM_189772.1| Oryza sativa (japonica cultivar-group), predic... 434 e-118
2dbj|AK070047.1| Oryza sativa (japonica cultivar-group) cDNA clon... 434 e-118
3dbj|AK067525.1| Oryza sativa (japonica cultivar-group) cDNA clon... 434 e-118
4dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 287 2e-74
5dbj|AP003683.3| Oryza sativa (japonica cultivar-group) genomic D... 287 2e-74
6gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete... 50 0.009
7emb|CR555306.1| Azoarcus sp. EbN1 complete genome 46 0.15
8emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome comple... 46 0.15
9emb|AJ311709.1|CGL311709 Colletotrichum gloeosporioides cat gene... 42 2.3
10gb|CP000150.1| Burkholderia sp. 383 chromosome 3, complete sequence 40 9.1
11ref|XM_470606.1| Oryza sativa (japonica cultivar-group), predic... 40 9.1
12gb|CP000359.1| Deinococcus geothermalis DSM 11300, complete genome 40 9.1
13gb|AC104645.8| Homo sapiens chromosome 3 clone CTD-2011M13, comp... 40 9.1
14gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 9.1
15ref|XM_755998.1| Ustilago maydis 521 hypothetical protein (UM049... 40 9.1
16emb|AL157788.16| Human DNA sequence from clone RP11-498J9 on chr... 40 9.1
17gb|AC011558.6| Homo sapiens chromosome 19 clone LLNLR-291F12, co... 40 9.1
18dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.1
19gb|AC134235.2| Oryza sativa (japonica cultivar-group) chromosome... 40 9.1
20gb|AC105927.2| Oryza sativa (japonica cultivar-group) chromosome... 40 9.1
21gb|AC135157.2| Oryza sativa (japonica cultivar-group) chromosome... 40 9.1
22gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome 40 9.1
23gb|AC004528.1|AC004528 Homo sapiens chromosome 19, cosmid R32184... 40 9.1
24emb|AL669913.15| Mouse DNA sequence from clone RP23-479C2 on chr... 40 9.1

>ref|NM_189772.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 3348

 Score =  434 bits (219), Expect = e-118
 Identities = 399/458 (87%), Gaps = 1/458 (0%)
 Strand = Plus / Minus

                                                                        
Query: 205  gggtagctgggagatgtagatgtcgtggcacgacgacgacggcagcaggggccgcagccg 264
            ||||||||| |||  ||||||||| ||||||||||||||||||||||  || | ||||| 
Sbjct: 3342 gggtagctgagagtggtagatgtcatggcacgacgacgacggcagcaacgggcacagcct 3283

                                                                        
Query: 265  cagcgagaacctgtagctcgccggcggcagcaggtactcctcatgcacgcacggcgtcca 324
            || ||||||   ||| |||||||||||||||| ||||| ||| ||||||||||||| |||
Sbjct: 3282 caccgagaaggcgtatctcgccggcggcagcaagtactgctcgtgcacgcacggcgacca 3223

                                                                        
Query: 325  gctgtcgtccccgcccacccccatgtgcctatgatcaagatgcacctcgatgtcatctcc 384
            |||||||||||| |||| |||||||||| | ||||||||||||||||||||||| |||||
Sbjct: 3222 gctgtcgtcccctcccagccccatgtgcttgtgatcaagatgcacctcgatgtcgtctcc 3163

                                                                        
Query: 385  cttggtcagcttgtgctgatgggtcgcccggtcgagctccacggagccgtaatagctggc 444
            ||||   |||||||| | ||| ||||| |||||||||||| ||| ||| || ||||||||
Sbjct: 3162 cttgacgagcttgtggttatgcgtcgcgcggtcgagctccgcggcgccatagtagctggc 3103

                                                                        
Query: 445  gctcgcctgcatcggcggggactcgccgtgggtcgaggcgaaaaggccgaacccgtcggc 504
            |||| ||||||||||||| |||||||||| || ||| ||||| |||||||||||||||||
Sbjct: 3102 gctcacctgcatcggcggcgactcgccgtaggccgacgcgaagaggccgaacccgtcggc 3043

                                                                        
Query: 505  gttcttaagcgccacccaccggacgtccgcgcgggcgccgcactcgcccgggacgatgta 564
            || ||  |||||||||||||||||||| || ||| ||||||||||||| ||||| |||||
Sbjct: 3042 gtcctggagcgccacccaccggacgtcagcccggccgccgcactcgccggggacaatgta 2983

                                                                        
Query: 565  nggcacgtggaggtcctccacgccgctctctgtacacgccgacgtgcgccgcggccttgc 624
             |||||||| || || || ||||||||||| |||||||||||||||||| |||||||| |
Sbjct: 2982 cggcacgtgcagctcgtcgacgccgctctc-gtacacgccgacgtgcgcggcggccttcc 2924

                                                  
Query: 625  ggtcggggtagcactcgaacgggcccctcccgtaccat 662
            |||| |||||||||||||| || |||||||||||||||
Sbjct: 2923 ggtccgggtagcactcgaatggccccctcccgtaccat 2886



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>dbj|AK070047.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023038J20, full
            insert sequence
          Length = 3913

 Score =  434 bits (219), Expect = e-118
 Identities = 399/458 (87%), Gaps = 1/458 (0%)
 Strand = Plus / Minus

                                                                        
Query: 205  gggtagctgggagatgtagatgtcgtggcacgacgacgacggcagcaggggccgcagccg 264
            ||||||||| |||  ||||||||| ||||||||||||||||||||||  || | ||||| 
Sbjct: 3516 gggtagctgagagtggtagatgtcatggcacgacgacgacggcagcaacgggcacagcct 3457

                                                                        
Query: 265  cagcgagaacctgtagctcgccggcggcagcaggtactcctcatgcacgcacggcgtcca 324
            || ||||||   ||| |||||||||||||||| ||||| ||| ||||||||||||| |||
Sbjct: 3456 caccgagaaggcgtatctcgccggcggcagcaagtactgctcgtgcacgcacggcgacca 3397

                                                                        
Query: 325  gctgtcgtccccgcccacccccatgtgcctatgatcaagatgcacctcgatgtcatctcc 384
            |||||||||||| |||| |||||||||| | ||||||||||||||||||||||| |||||
Sbjct: 3396 gctgtcgtcccctcccagccccatgtgcttgtgatcaagatgcacctcgatgtcgtctcc 3337

                                                                        
Query: 385  cttggtcagcttgtgctgatgggtcgcccggtcgagctccacggagccgtaatagctggc 444
            ||||   |||||||| | ||| ||||| |||||||||||| ||| ||| || ||||||||
Sbjct: 3336 cttgacgagcttgtggttatgcgtcgcgcggtcgagctccgcggcgccatagtagctggc 3277

                                                                        
Query: 445  gctcgcctgcatcggcggggactcgccgtgggtcgaggcgaaaaggccgaacccgtcggc 504
            |||| ||||||||||||| |||||||||| || ||| ||||| |||||||||||||||||
Sbjct: 3276 gctcacctgcatcggcggcgactcgccgtaggccgacgcgaagaggccgaacccgtcggc 3217

                                                                        
Query: 505  gttcttaagcgccacccaccggacgtccgcgcgggcgccgcactcgcccgggacgatgta 564
            || ||  |||||||||||||||||||| || ||| ||||||||||||| ||||| |||||
Sbjct: 3216 gtcctggagcgccacccaccggacgtcagcccggccgccgcactcgccggggacaatgta 3157

                                                                        
Query: 565  nggcacgtggaggtcctccacgccgctctctgtacacgccgacgtgcgccgcggccttgc 624
             |||||||| || || || ||||||||||| |||||||||||||||||| |||||||| |
Sbjct: 3156 cggcacgtgcagctcgtcgacgccgctctc-gtacacgccgacgtgcgcggcggccttcc 3098

                                                  
Query: 625  ggtcggggtagcactcgaacgggcccctcccgtaccat 662
            |||| |||||||||||||| || |||||||||||||||
Sbjct: 3097 ggtccgggtagcactcgaatggccccctcccgtaccat 3060



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>dbj|AK067525.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013108P17, full
            insert sequence
          Length = 3268

 Score =  434 bits (219), Expect = e-118
 Identities = 399/458 (87%), Gaps = 1/458 (0%)
 Strand = Plus / Minus

                                                                        
Query: 205  gggtagctgggagatgtagatgtcgtggcacgacgacgacggcagcaggggccgcagccg 264
            ||||||||| |||  ||||||||| ||||||||||||||||||||||  || | ||||| 
Sbjct: 3079 gggtagctgagagtggtagatgtcatggcacgacgacgacggcagcaacgggcacagcct 3020

                                                                        
Query: 265  cagcgagaacctgtagctcgccggcggcagcaggtactcctcatgcacgcacggcgtcca 324
            || ||||||   ||| |||||||||||||||| ||||| ||| ||||||||||||| |||
Sbjct: 3019 caccgagaaggcgtatctcgccggcggcagcaagtactgctcgtgcacgcacggcgacca 2960

                                                                        
Query: 325  gctgtcgtccccgcccacccccatgtgcctatgatcaagatgcacctcgatgtcatctcc 384
            |||||||||||| |||| |||||||||| | ||||||||||||||||||||||| |||||
Sbjct: 2959 gctgtcgtcccctcccagccccatgtgcttgtgatcaagatgcacctcgatgtcgtctcc 2900

                                                                        
Query: 385  cttggtcagcttgtgctgatgggtcgcccggtcgagctccacggagccgtaatagctggc 444
            ||||   |||||||| | ||| ||||| |||||||||||| ||| ||| || ||||||||
Sbjct: 2899 cttgacgagcttgtggttatgcgtcgcgcggtcgagctccgcggcgccatagtagctggc 2840

                                                                        
Query: 445  gctcgcctgcatcggcggggactcgccgtgggtcgaggcgaaaaggccgaacccgtcggc 504
            |||| ||||||||||||| |||||||||| || ||| ||||| |||||||||||||||||
Sbjct: 2839 gctcacctgcatcggcggcgactcgccgtaggccgacgcgaagaggccgaacccgtcggc 2780

                                                                        
Query: 505  gttcttaagcgccacccaccggacgtccgcgcgggcgccgcactcgcccgggacgatgta 564
            || ||  |||||||||||||||||||| || ||| ||||||||||||| ||||| |||||
Sbjct: 2779 gtcctggagcgccacccaccggacgtcagcccggccgccgcactcgccggggacaatgta 2720

                                                                        
Query: 565  nggcacgtggaggtcctccacgccgctctctgtacacgccgacgtgcgccgcggccttgc 624
             |||||||| || || || ||||||||||| |||||||||||||||||| |||||||| |
Sbjct: 2719 cggcacgtgcagctcgtcgacgccgctctc-gtacacgccgacgtgcgcggcggccttcc 2661

                                                  
Query: 625  ggtcggggtagcactcgaacgggcccctcccgtaccat 662
            |||| |||||||||||||| || |||||||||||||||
Sbjct: 2660 ggtccgggtagcactcgaatggccccctcccgtaccat 2623



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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  287 bits (145), Expect = 2e-74
 Identities = 259/296 (87%), Gaps = 1/296 (0%)
 Strand = Plus / Minus

                                                                            
Query: 367      cacctcgatgtcatctcccttggtcagcttgtgctgatgggtcgcccggtcgagctccac 426
                |||||||||||| |||||||||   |||||||| | ||| ||||| |||||||||||| |
Sbjct: 41954437 cacctcgatgtcgtctcccttgacgagcttgtggttatgcgtcgcgcggtcgagctccgc 41954378

                                                                            
Query: 427      ggagccgtaatagctggcgctcgcctgcatcggcggggactcgccgtgggtcgaggcgaa 486
                || ||| || |||||||||||| ||||||||||||| |||||||||| || ||| |||||
Sbjct: 41954377 ggcgccatagtagctggcgctcacctgcatcggcggcgactcgccgtaggccgacgcgaa 41954318

                                                                            
Query: 487      aaggccgaacccgtcggcgttcttaagcgccacccaccggacgtccgcgcgggcgccgca 546
                 ||||||||||||||||||| ||  |||||||||||||||||||| || ||| |||||||
Sbjct: 41954317 gaggccgaacccgtcggcgtcctggagcgccacccaccggacgtcagcccggccgccgca 41954258

                                                                            
Query: 547      ctcgcccgggacgatgtanggcacgtggaggtcctccacgccgctctctgtacacgccga 606
                |||||| ||||| ||||| |||||||| || || || ||||||||||| |||||||||||
Sbjct: 41954257 ctcgccggggacaatgtacggcacgtgcagctcgtcgacgccgctctc-gtacacgccga 41954199

                                                                        
Query: 607      cgtgcgccgcggccttgcggtcggggtagcactcgaacgggcccctcccgtaccat 662
                ||||||| |||||||| ||||| |||||||||||||| || |||||||||||||||
Sbjct: 41954198 cgtgcgcggcggccttccggtccgggtagcactcgaatggccccctcccgtaccat 41954143



 Score =  157 bits (79), Expect = 6e-35
 Identities = 145/167 (86%)
 Strand = Plus / Minus

                                                                            
Query: 205      gggtagctgggagatgtagatgtcgtggcacgacgacgacggcagcaggggccgcagccg 264
                ||||||||| |||  ||||||||| ||||||||||||||||||||||  || | ||||| 
Sbjct: 41954747 gggtagctgagagtggtagatgtcatggcacgacgacgacggcagcaacgggcacagcct 41954688

                                                                            
Query: 265      cagcgagaacctgtagctcgccggcggcagcaggtactcctcatgcacgcacggcgtcca 324
                || ||||||   ||| |||||||||||||||| ||||| ||| ||||||||||||| |||
Sbjct: 41954687 caccgagaaggcgtatctcgccggcggcagcaagtactgctcgtgcacgcacggcgacca 41954628

                                                               
Query: 325      gctgtcgtccccgcccacccccatgtgcctatgatcaagatgcacct 371
                |||||||||||| |||| |||||||||| | ||||||||||||||||
Sbjct: 41954627 gctgtcgtcccctcccagccccatgtgcttgtgatcaagatgcacct 41954581



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>dbj|AP003683.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0431G06
          Length = 140466

 Score =  287 bits (145), Expect = 2e-74
 Identities = 259/296 (87%), Gaps = 1/296 (0%)
 Strand = Plus / Minus

                                                                         
Query: 367   cacctcgatgtcatctcccttggtcagcttgtgctgatgggtcgcccggtcgagctccac 426
             |||||||||||| |||||||||   |||||||| | ||| ||||| |||||||||||| |
Sbjct: 56514 cacctcgatgtcgtctcccttgacgagcttgtggttatgcgtcgcgcggtcgagctccgc 56455

                                                                         
Query: 427   ggagccgtaatagctggcgctcgcctgcatcggcggggactcgccgtgggtcgaggcgaa 486
             || ||| || |||||||||||| ||||||||||||| |||||||||| || ||| |||||
Sbjct: 56454 ggcgccatagtagctggcgctcacctgcatcggcggcgactcgccgtaggccgacgcgaa 56395

                                                                         
Query: 487   aaggccgaacccgtcggcgttcttaagcgccacccaccggacgtccgcgcgggcgccgca 546
              ||||||||||||||||||| ||  |||||||||||||||||||| || ||| |||||||
Sbjct: 56394 gaggccgaacccgtcggcgtcctggagcgccacccaccggacgtcagcccggccgccgca 56335

                                                                         
Query: 547   ctcgcccgggacgatgtanggcacgtggaggtcctccacgccgctctctgtacacgccga 606
             |||||| ||||| ||||| |||||||| || || || ||||||||||| |||||||||||
Sbjct: 56334 ctcgccggggacaatgtacggcacgtgcagctcgtcgacgccgctctc-gtacacgccga 56276

                                                                     
Query: 607   cgtgcgccgcggccttgcggtcggggtagcactcgaacgggcccctcccgtaccat 662
             ||||||| |||||||| ||||| |||||||||||||| || |||||||||||||||
Sbjct: 56275 cgtgcgcggcggccttccggtccgggtagcactcgaatggccccctcccgtaccat 56220



 Score =  157 bits (79), Expect = 6e-35
 Identities = 145/167 (86%)
 Strand = Plus / Minus

                                                                         
Query: 205   gggtagctgggagatgtagatgtcgtggcacgacgacgacggcagcaggggccgcagccg 264
             ||||||||| |||  ||||||||| ||||||||||||||||||||||  || | ||||| 
Sbjct: 56824 gggtagctgagagtggtagatgtcatggcacgacgacgacggcagcaacgggcacagcct 56765

                                                                         
Query: 265   cagcgagaacctgtagctcgccggcggcagcaggtactcctcatgcacgcacggcgtcca 324
             || ||||||   ||| |||||||||||||||| ||||| ||| ||||||||||||| |||
Sbjct: 56764 caccgagaaggcgtatctcgccggcggcagcaagtactgctcgtgcacgcacggcgacca 56705

                                                            
Query: 325   gctgtcgtccccgcccacccccatgtgcctatgatcaagatgcacct 371
             |||||||||||| |||| |||||||||| | ||||||||||||||||
Sbjct: 56704 gctgtcgtcccctcccagccccatgtgcttgtgatcaagatgcacct 56658



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>gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete genome
          Length = 6093698

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                       
Query: 244    cggcagcaggggccgcagccgcagc 268
              |||||||||||||||||||||||||
Sbjct: 575874 cggcagcaggggccgcagccgcagc 575898



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>emb|CR555306.1| Azoarcus sp. EbN1 complete genome
          Length = 4296230

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                      
Query: 233     cacgacgacgacggcagcagggg 255
               |||||||||||||||||||||||
Sbjct: 4237221 cacgacgacgacggcagcagggg 4237199



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>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence
          Length = 3716413

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                             
Query: 443    gcgctcgcctgcatcggcggggactcgccgt 473
              ||||||||||||||||||| ||||| |||||
Sbjct: 817328 gcgctcgcctgcatcggcgcggactggccgt 817358



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>emb|AJ311709.1|CGL311709 Colletotrichum gloeosporioides cat gene for catalase, exons 1-4
          Length = 1919

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 524  cggacgtccgcgcgggcgccg 544
            |||||||||||||||||||||
Sbjct: 1601 cggacgtccgcgcgggcgccg 1581



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>gb|CP000150.1| Burkholderia sp. 383 chromosome 3, complete sequence
          Length = 1395069

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 490    gccgaacccgtcggcgttct 509
              ||||||||||||||||||||
Sbjct: 907698 gccgaacccgtcggcgttct 907679



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>ref|XM_470606.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1080

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 369 cctcgatgtcatctcccttg 388
           ||||||||||||||||||||
Sbjct: 344 cctcgatgtcatctcccttg 363



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>gb|CP000359.1| Deinococcus geothermalis DSM 11300, complete genome
          Length = 2467205

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 248     agcaggggccgcagccgcag 267
               ||||||||||||||||||||
Sbjct: 2202913 agcaggggccgcagccgcag 2202894



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>gb|AC104645.8| Homo sapiens chromosome 3 clone CTD-2011M13, complete sequence
          Length = 153595

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 129   caatgatttccctctcacat 148
             ||||||||||||||||||||
Sbjct: 89092 caatgatttccctctcacat 89073



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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 233     cacgacgacgacggcagcag 252
               ||||||||||||||||||||
Sbjct: 7877258 cacgacgacgacggcagcag 7877277



 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 369     cctcgatgtcatctcccttg 388
               ||||||||||||||||||||
Sbjct: 6846025 cctcgatgtcatctcccttg 6846006



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>ref|XM_755998.1| Ustilago maydis 521 hypothetical protein (UM04944.1) partial mRNA
          Length = 4794

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 14   cagcacaacacgctcgcttg 33
            ||||||||||||||||||||
Sbjct: 3152 cagcacaacacgctcgcttg 3133



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>emb|AL157788.16| Human DNA sequence from clone RP11-498J9 on chromosome 10 Contains a
             pseudogene similar to part of lactate dehydrogenase A
             (LDH1) (LDHD), two novel genes, the NANOS1 gene for nanos
             homolog 1 (Drosophila) and one CpG island, complete
             sequence
          Length = 119104

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 292   cagcaggtactcctcatgca 311
             ||||||||||||||||||||
Sbjct: 61669 cagcaggtactcctcatgca 61688



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>gb|AC011558.6| Homo sapiens chromosome 19 clone LLNLR-291F12, complete sequence
          Length = 43128

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 327 tgtcgtccccgcccaccccc 346
           ||||||||||||||||||||
Sbjct: 784 tgtcgtccccgcccaccccc 803



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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 233     cacgacgacgacggcagcag 252
               ||||||||||||||||||||
Sbjct: 7875093 cacgacgacgacggcagcag 7875112



 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 369     cctcgatgtcatctcccttg 388
               ||||||||||||||||||||
Sbjct: 6843922 cctcgatgtcatctcccttg 6843903



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>gb|AC134235.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone
             OSJNBa0030J04, complete sequence
          Length = 153431

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 233   cacgacgacgacggcagcag 252
             ||||||||||||||||||||
Sbjct: 62856 cacgacgacgacggcagcag 62875



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>gb|AC105927.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1781E12,
             complete sequence
          Length = 120392

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 369   cctcgatgtcatctcccttg 388
             ||||||||||||||||||||
Sbjct: 41960 cctcgatgtcatctcccttg 41941



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>gb|AC135157.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1017C11,
             complete sequence
          Length = 166072

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 369   cctcgatgtcatctcccttg 388
             ||||||||||||||||||||
Sbjct: 12622 cctcgatgtcatctcccttg 12603



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>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome
          Length = 3551823

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 224    atgtcgtggcacgacgacgacggc 247
              ||||||||||| ||||||||||||
Sbjct: 573423 atgtcgtggcaggacgacgacggc 573446



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>gb|AC004528.1|AC004528 Homo sapiens chromosome 19, cosmid R32184, complete sequence
          Length = 47066

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 327   tgtcgtccccgcccaccccc 346
             ||||||||||||||||||||
Sbjct: 45945 tgtcgtccccgcccaccccc 45964



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>emb|AL669913.15| Mouse DNA sequence from clone RP23-479C2 on chromosome 2, complete
             sequence
          Length = 184221

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 327   tgtcgtccccgcccacccccatgtgcct 354
             |||||||||| ||| |||||||||||||
Sbjct: 83292 tgtcgtccccccccccccccatgtgcct 83319


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,766,271
Number of Sequences: 3902068
Number of extensions: 3766271
Number of successful extensions: 76573
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 75989
Number of HSP's gapped (non-prelim): 579
length of query: 669
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 646
effective length of database: 17,143,297,704
effective search space: 11074570316784
effective search space used: 11074570316784
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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