ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbah62a08
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1METK_BACHD (Q9K7Q9) S-adenosylmethionine synthetase (EC 2.5.1.6)... 30 4.9

>METK_BACHD (Q9K7Q9) S-adenosylmethionine synthetase (EC 2.5.1.6) (Methionine|
           adenosyltransferase) (AdoMet synthetase) (MAT)
          Length = 399

 Score = 30.4 bits (67), Expect = 4.9
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = -3

Query: 556 AAYHHAGATPVAAPWRQKNQGAVLRRK 476
           AAY H G T V  PW Q ++  +LR++
Sbjct: 372 AAYGHFGRTDVELPWEQTDKAEILRQQ 398


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 84,796,894
Number of Sequences: 219361
Number of extensions: 1647229
Number of successful extensions: 5063
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 4888
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5062
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6370891296
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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