Clone Name | rbah61l07 |
---|---|
Clone Library Name | barley_pub |
>ref|NM_191994.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 3138 Score = 228 bits (115), Expect = 2e-56 Identities = 277/331 (83%) Strand = Plus / Minus Query: 274 tggaggaaacgttgcctatcttgctctcctggaagctgctgatgcaggagagtgctgccg 333 |||| ||||| |||| ||||||||||||||| ||| | |||||||||| | || ||| Sbjct: 2770 tggatgaaacattgcgtatcttgctctcctgaaaggtattgatgcaggacatcgccgcca 2711 Query: 334 tcgtatggccttgtctcagttttaggcagaatctctccattatcatggcagccggtggaa 393 || | |||||||||||||| ||||| ||||| ||||||||||||| || || |||| Sbjct: 2710 ctgtgtccccttgtctcagtttcaggcaaaatctttccattatcatgggggcaggcggaa 2651 Query: 394 cccgaccattgcgacacaggtagtcccatatgtcttccagcagctgctccttcccgctcc 453 | || |||| | |||| ||||||||||| ||||||| | ||||||||||||| ||| Sbjct: 2650 ctcggccatattggcacatgtagtcccatacatcttccaataactgctccttcccgttcc 2591 Query: 454 tataggcatcaagtaccatgcgtaggtgccttctttcgtcaaaatggtagccgttagata 513 |||| |||||||| ||||| || |||||||||| ||||||||| |||||||| |||||| Sbjct: 2590 tatatgcatcaagcaccatacgaaggtgccttcgttcgtcaaagtggtagccactagata 2531 Query: 514 acattttgcgaaatgcatactcgaattcattccacttttttgcttcggcacaagcgtcca 573 |||||||||||||||||||||| || ||||||||| | |||||||| ||||| || |||| Sbjct: 2530 acattttgcgaaatgcatactcaaaatcattccacctctttgcttcagcacaggcctcca 2471 Query: 574 agaaagtattgaaagtaaacttgtctgcaat 604 |||| ||||||||||||||||||||||||| Sbjct: 2470 tgaaaatattgaaagtaaacttgtctgcaat 2440
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 180 bits (91), Expect = 4e-42 Identities = 145/163 (88%) Strand = Plus / Minus Query: 442 ccttcccgctcctataggcatcaagtaccatgcgtaggtgccttctttcgtcaaaatggt 501 |||||||| ||||||| |||||||| ||||| || |||||||||| ||||||||| |||| Sbjct: 27723827 ccttcccgttcctatatgcatcaagcaccatacgaaggtgccttcgttcgtcaaagtggt 27723768 Query: 502 agccgttagataacattttgcgaaatgcatactcgaattcattccacttttttgcttcgg 561 |||| |||||||||||||||||||||||||||| || ||||||||| | |||||||| | Sbjct: 27723767 agccactagataacattttgcgaaatgcatactcaaaatcattccacctctttgcttcag 27723708 Query: 562 cacaagcgtccaagaaagtattgaaagtaaacttgtctgcaat 604 |||| || |||| |||| ||||||||||||||||||||||||| Sbjct: 27723707 cacaggcctccatgaaaatattgaaagtaaacttgtctgcaat 27723665 Score = 56.0 bits (28), Expect = 1e-04 Identities = 88/108 (81%) Strand = Plus / Minus Query: 274 tggaggaaacgttgcctatcttgctctcctggaagctgctgatgcaggagagtgctgccg 333 |||| ||||| |||| ||||||||||||||| ||| | |||||||||| | || ||| Sbjct: 27724523 tggatgaaacattgcgtatcttgctctcctgaaaggtattgatgcaggacatcgccgcca 27724464 Query: 334 tcgtatggccttgtctcagttttaggcagaatctctccattatcatgg 381 || | |||||||||||||| ||||| ||||| ||||||||||||| Sbjct: 27724463 ctgtgtccccttgtctcagtttcaggcaaaatctttccattatcatgg 27724416
>dbj|AP003374.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1117_G01 Length = 125454 Score = 180 bits (91), Expect = 4e-42 Identities = 145/163 (88%) Strand = Plus / Minus Query: 442 ccttcccgctcctataggcatcaagtaccatgcgtaggtgccttctttcgtcaaaatggt 501 |||||||| ||||||| |||||||| ||||| || |||||||||| ||||||||| |||| Sbjct: 15882 ccttcccgttcctatatgcatcaagcaccatacgaaggtgccttcgttcgtcaaagtggt 15823 Query: 502 agccgttagataacattttgcgaaatgcatactcgaattcattccacttttttgcttcgg 561 |||| |||||||||||||||||||||||||||| || ||||||||| | |||||||| | Sbjct: 15822 agccactagataacattttgcgaaatgcatactcaaaatcattccacctctttgcttcag 15763 Query: 562 cacaagcgtccaagaaagtattgaaagtaaacttgtctgcaat 604 |||| || |||| |||| ||||||||||||||||||||||||| Sbjct: 15762 cacaggcctccatgaaaatattgaaagtaaacttgtctgcaat 15720 Score = 56.0 bits (28), Expect = 1e-04 Identities = 88/108 (81%) Strand = Plus / Minus Query: 274 tggaggaaacgttgcctatcttgctctcctggaagctgctgatgcaggagagtgctgccg 333 |||| ||||| |||| ||||||||||||||| ||| | |||||||||| | || ||| Sbjct: 16578 tggatgaaacattgcgtatcttgctctcctgaaaggtattgatgcaggacatcgccgcca 16519 Query: 334 tcgtatggccttgtctcagttttaggcagaatctctccattatcatgg 381 || | |||||||||||||| ||||| ||||| ||||||||||||| Sbjct: 16518 ctgtgtccccttgtctcagtttcaggcaaaatctttccattatcatgg 16471
>dbj|AP003264.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0485G01 Length = 167203 Score = 180 bits (91), Expect = 4e-42 Identities = 145/163 (88%) Strand = Plus / Minus Query: 442 ccttcccgctcctataggcatcaagtaccatgcgtaggtgccttctttcgtcaaaatggt 501 |||||||| ||||||| |||||||| ||||| || |||||||||| ||||||||| |||| Sbjct: 132393 ccttcccgttcctatatgcatcaagcaccatacgaaggtgccttcgttcgtcaaagtggt 132334 Query: 502 agccgttagataacattttgcgaaatgcatactcgaattcattccacttttttgcttcgg 561 |||| |||||||||||||||||||||||||||| || ||||||||| | |||||||| | Sbjct: 132333 agccactagataacattttgcgaaatgcatactcaaaatcattccacctctttgcttcag 132274 Query: 562 cacaagcgtccaagaaagtattgaaagtaaacttgtctgcaat 604 |||| || |||| |||| ||||||||||||||||||||||||| Sbjct: 132273 cacaggcctccatgaaaatattgaaagtaaacttgtctgcaat 132231 Score = 56.0 bits (28), Expect = 1e-04 Identities = 88/108 (81%) Strand = Plus / Minus Query: 274 tggaggaaacgttgcctatcttgctctcctggaagctgctgatgcaggagagtgctgccg 333 |||| ||||| |||| ||||||||||||||| ||| | |||||||||| | || ||| Sbjct: 133089 tggatgaaacattgcgtatcttgctctcctgaaaggtattgatgcaggacatcgccgcca 133030 Query: 334 tcgtatggccttgtctcagttttaggcagaatctctccattatcatgg 381 || | |||||||||||||| ||||| ||||| ||||||||||||| Sbjct: 133029 ctgtgtccccttgtctcagtttcaggcaaaatctttccattatcatgg 132982
>gb|AC124828.14| Mus musculus chromosome 5, clone RP24-126A19, complete sequence Length = 188504 Score = 44.1 bits (22), Expect = 0.54 Identities = 25/26 (96%) Strand = Plus / Minus Query: 427 cttccagcagctgctccttcccgctc 452 ||||||| |||||||||||||||||| Sbjct: 175856 cttccagaagctgctccttcccgctc 175831
>dbj|AB090813.1| Anopheles gambiae retrotransposon RTAg4 DNA, complete sequence Length = 7072 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Minus Query: 399 ccattgcgacacaggtagtccc 420 |||||||||||||||||||||| Sbjct: 6118 ccattgcgacacaggtagtccc 6097
>emb|AL513345.20| Mouse DNA sequence from clone RP23-129N7 on chromosome 15, complete sequence Length = 217225 Score = 44.1 bits (22), Expect = 0.54 Identities = 25/26 (96%) Strand = Plus / Minus Query: 427 cttccagcagctgctccttcccgctc 452 ||||||| |||||||||||||||||| Sbjct: 31018 cttccagaagctgctccttcccgctc 30993
>gb|AC104414.8| Mus musculus chromosome 3, clone RP23-99I7, complete sequence Length = 212613 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 454 tataggcatcaagtaccatgc 474 ||||||||||||||||||||| Sbjct: 3072 tataggcatcaagtaccatgc 3092
>gb|AC116507.9| Mus musculus chromosome 19, clone RP24-309C17, complete sequence Length = 168364 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 425 gtcttccagcagctgctcctt 445 ||||||||||||||||||||| Sbjct: 75803 gtcttccagcagctgctcctt 75823
>gb|AC133508.3| Mus musculus BAC clone RP23-383K24 from chromosome 3, complete sequence Length = 192136 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 454 tataggcatcaagtaccatgc 474 ||||||||||||||||||||| Sbjct: 99166 tataggcatcaagtaccatgc 99146
>gb|AC108950.4| Mus musculus BAC clone RP23-458E21 from chromosome 9, complete sequence Length = 181083 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 109 caccagaaccaccaaggaact 129 ||||||||||||||||||||| Sbjct: 65393 caccagaaccaccaaggaact 65373
>gb|AC079244.29| Mus musculus strain C57BL/6J chromosome 9 clone rp23-343k17, complete sequence Length = 223861 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 109 caccagaaccaccaaggaact 129 ||||||||||||||||||||| Sbjct: 209221 caccagaaccaccaaggaact 209201
>gb|AC079245.35| Mus musculus strain C57BL/6J chromosome 9 clone rp23-426k2, complete sequence Length = 213098 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 109 caccagaaccaccaaggaact 129 ||||||||||||||||||||| Sbjct: 209103 caccagaaccaccaaggaact 209123
>dbj|AP001591.5| Homo sapiens genomic DNA, chromosome 11 clone:RP11-838I13, complete sequence Length = 178982 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 424 tgtcttccagcagctgctcct 444 ||||||||||||||||||||| Sbjct: 173742 tgtcttccagcagctgctcct 173762
>emb|AL844490.4| Mouse DNA sequence from clone RP23-98P13 on chromosome X, complete sequence Length = 108612 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 415 agtcccatatgtcttccagca 435 ||||||||||||||||||||| Sbjct: 83789 agtcccatatgtcttccagca 83809
>dbj|AP000753.4| Homo sapiens genomic DNA, chromosome 11 clone:RP11-697H9, complete sequence Length = 184057 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 424 tgtcttccagcagctgctcct 444 ||||||||||||||||||||| Sbjct: 76432 tgtcttccagcagctgctcct 76452
>gb|AC118193.9| Mus musculus chromosome 8, clone RP23-241A10, complete sequence Length = 222682 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 44 gataggaggctaacatggcggtca 67 |||||||||||||||| ||||||| Sbjct: 150567 gataggaggctaacatagcggtca 150544
>gb|AE017180.1| Geobacter sulfurreducens PCA, complete genome Length = 3814139 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 210 agctcggcgacgctctcctcctcg 233 |||||||||| ||||||||||||| Sbjct: 1303638 agctcggcgaagctctcctcctcg 1303615
>gb|DQ160197.1| Homo sapiens RAD51-like 1 (S. cerevisiae) (RAD51L1) gene, complete cds Length = 660392 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 420 catatgtcttccagcagctg 439 |||||||||||||||||||| Sbjct: 480305 catatgtcttccagcagctg 480324
>ref|XM_537383.2| PREDICTED: Canis familiaris similar to RING finger protein 31 (Zinc in-between-RING-finger ubiquitin-associated domain protein) (LOC480259), mRNA Length = 3490 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 424 tgtcttccagcagctgctcc 443 |||||||||||||||||||| Sbjct: 715 tgtcttccagcagctgctcc 696
>ref|XM_500587.1| Yarrowia lipolytica CLIB122, YALI0B06919g predicted mRNA Length = 1338 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 250 ggttcagaagactcgaccac 269 |||||||||||||||||||| Sbjct: 437 ggttcagaagactcgaccac 418
>emb|AL078633.32|HS1005F21 Human DNA sequence from clone RP5-1005F21 on chromosome 20 Contains the PSMA7 gene for proteasome (prosome, macropain) subunit alpha type 7, the HRH3 gene for histamine receptor H3, the SS18L1 gene for synovial sarcoma translocation gene on chromosome 18-like 1, the GTPBP5 gene for GTP binding protein 5 (putative), the 3' end of the C20orf40 gene for a novel protein similar to Pleurodeles waltlii RAP55 protein and seven CpG islands, complete sequence Length = 100976 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 174 ctccctggccttgagaggcc 193 |||||||||||||||||||| Sbjct: 30569 ctccctggccttgagaggcc 30588
>emb|AL033381.2|HS856G1 Human DNA sequence from clone RP5-856G1 on chromosome 6p24.1-25.3, complete sequence Length = 151795 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 363 aatctctccattatcatggcagcc 386 |||||||||||||| ||||||||| Sbjct: 30831 aatctctccattatgatggcagcc 30808
>emb|AJ278954.1|SLO278954 Spraguea lophii partial rpb1 gene for RNA polymerase II largest subunit Length = 1755 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 573 aagaaagtattgaaagtaaa 592 |||||||||||||||||||| Sbjct: 707 aagaaagtattgaaagtaaa 726
>gb|AF462673.1| Homo sapiens isolate PELIZ immunoglobulin light chain variable region mRNA, partial cds Length = 376 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 297 ctctcctggaagctgctgat 316 |||||||||||||||||||| Sbjct: 132 ctctcctggaagctgctgat 113
>gb|AC183527.2| Mus musculus BAC clone RP23-30G12 from chromosome 12, complete sequence Length = 208026 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 573 aagaaagtattgaaagtaaa 592 |||||||||||||||||||| Sbjct: 24088 aagaaagtattgaaagtaaa 24107
>gb|DQ427831.1| Sorghum propinquum locus pHER1D05 genomic sequence Length = 591 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 430 ccagcagctgctccttcccg 449 |||||||||||||||||||| Sbjct: 178 ccagcagctgctccttcccg 159
>gb|DQ427830.1| Sorghum bicolor voucher PI585454 locus pHER1D05 genomic sequence Length = 590 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 430 ccagcagctgctccttcccg 449 |||||||||||||||||||| Sbjct: 178 ccagcagctgctccttcccg 159
>gb|DQ427829.1| Sorghum bicolor voucher PI267539 locus pHER1D05 genomic sequence Length = 590 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 430 ccagcagctgctccttcccg 449 |||||||||||||||||||| Sbjct: 178 ccagcagctgctccttcccg 159
>gb|DQ427828.1| Sorghum bicolor voucher PI267408 locus pHER1D05 genomic sequence Length = 586 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 430 ccagcagctgctccttcccg 449 |||||||||||||||||||| Sbjct: 178 ccagcagctgctccttcccg 159
>gb|DQ427827.1| Sorghum bicolor voucher PI221607 locus pHER1D05 genomic sequence Length = 586 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 430 ccagcagctgctccttcccg 449 |||||||||||||||||||| Sbjct: 178 ccagcagctgctccttcccg 159
>gb|DQ427826.1| Sorghum bicolor voucher PI152702 locus pHER1D05 genomic sequence Length = 586 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 430 ccagcagctgctccttcccg 449 |||||||||||||||||||| Sbjct: 178 ccagcagctgctccttcccg 159
>gb|DQ427825.1| Sorghum bicolor voucher NSL92371 locus pHER1D05 genomic sequence Length = 586 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 430 ccagcagctgctccttcccg 449 |||||||||||||||||||| Sbjct: 178 ccagcagctgctccttcccg 159
>gb|DQ427824.1| Sorghum bicolor voucher NSL87666 locus pHER1D05 genomic sequence Length = 586 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 430 ccagcagctgctccttcccg 449 |||||||||||||||||||| Sbjct: 178 ccagcagctgctccttcccg 159
>gb|DQ427823.1| Sorghum bicolor voucher NSL77217 locus pHER1D05 genomic sequence Length = 586 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 430 ccagcagctgctccttcccg 449 |||||||||||||||||||| Sbjct: 178 ccagcagctgctccttcccg 159
>gb|DQ427822.1| Sorghum bicolor voucher NSL77034 locus pHER1D05 genomic sequence Length = 586 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 430 ccagcagctgctccttcccg 449 |||||||||||||||||||| Sbjct: 178 ccagcagctgctccttcccg 159
>gb|DQ427821.1| Sorghum bicolor voucher NSL56174 locus pHER1D05 genomic sequence Length = 586 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 430 ccagcagctgctccttcccg 449 |||||||||||||||||||| Sbjct: 178 ccagcagctgctccttcccg 159
>gb|DQ427820.1| Sorghum bicolor voucher NSL56003 locus pHER1D05 genomic sequence Length = 586 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 430 ccagcagctgctccttcccg 449 |||||||||||||||||||| Sbjct: 178 ccagcagctgctccttcccg 159
>gb|DQ427819.1| Sorghum bicolor voucher NSL55243 locus pHER1D05 genomic sequence Length = 586 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 430 ccagcagctgctccttcccg 449 |||||||||||||||||||| Sbjct: 178 ccagcagctgctccttcccg 159
>gb|DQ427818.1| Sorghum bicolor voucher NSL51365 locus pHER1D05 genomic sequence Length = 586 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 430 ccagcagctgctccttcccg 449 |||||||||||||||||||| Sbjct: 178 ccagcagctgctccttcccg 159
>gb|DQ427817.1| Sorghum bicolor voucher NSL51030 locus pHER1D05 genomic sequence Length = 590 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 430 ccagcagctgctccttcccg 449 |||||||||||||||||||| Sbjct: 178 ccagcagctgctccttcccg 159
>gb|DQ427816.1| Sorghum bicolor voucher NSL50875 locus pHER1D05 genomic sequence Length = 588 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 430 ccagcagctgctccttcccg 449 |||||||||||||||||||| Sbjct: 178 ccagcagctgctccttcccg 159
>gb|DQ427815.1| Sorghum bicolor voucher BTx623 locus pHER1D05 genomic sequence Length = 588 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 430 ccagcagctgctccttcccg 449 |||||||||||||||||||| Sbjct: 178 ccagcagctgctccttcccg 159
>gb|AC098873.3| Homo sapiens BAC clone RP11-793H20 from 4, complete sequence Length = 119147 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 539 ttcattccacttttttgctt 558 |||||||||||||||||||| Sbjct: 113278 ttcattccacttttttgctt 113259
>gb|AC097468.3| Homo sapiens BAC clone RP11-33O4 from 2, complete sequence Length = 169741 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 66 caagaattacagaaaggcacccat 89 ||||||||| |||||||||||||| Sbjct: 108467 caagaattagagaaaggcacccat 108490
>gb|AC003014.1|AC003014 Human PAC clone RP1-290B4 from Xq23, complete sequence Length = 76169 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 512 taacattttgcgaaatgcatactc 535 ||||||||||| |||||||||||| Sbjct: 45712 taacattttgcaaaatgcatactc 45689
>emb|CR391915.9| Zebrafish DNA sequence from clone CH211-130O18 in linkage group 19, complete sequence Length = 77634 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 540 tcattccacttttttgcttc 559 |||||||||||||||||||| Sbjct: 45152 tcattccacttttttgcttc 45171
>emb|AL122013.5|CNS01DSU Human chromosome 14 DNA sequence BAC R-204K16 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 173010 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 420 catatgtcttccagcagctg 439 |||||||||||||||||||| Sbjct: 161024 catatgtcttccagcagctg 161005
>emb|CT025606.10| Mouse DNA sequence from clone RP24-120D14 on chromosome 12, complete sequence Length = 164251 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 573 aagaaagtattgaaagtaaa 592 |||||||||||||||||||| Sbjct: 39878 aagaaagtattgaaagtaaa 39859
>emb|CR382128.1| Yarrowia lipolytica chromosome B of strain CLIB122 of Yarrowia lipolytica Length = 3066374 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 250 ggttcagaagactcgaccac 269 |||||||||||||||||||| Sbjct: 923460 ggttcagaagactcgaccac 923441
>emb|AL732572.10| Mouse DNA sequence from clone RP23-32C16 on chromosome 2, complete sequence Length = 213704 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 306 aagctgctgatgcaggagagtgct 329 |||||| ||||||||||||||||| Sbjct: 196119 aagctgatgatgcaggagagtgct 196142 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,650,629 Number of Sequences: 3902068 Number of extensions: 4650629 Number of successful extensions: 86548 Number of sequences better than 10.0: 51 Number of HSP's better than 10.0 without gapping: 51 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 86381 Number of HSP's gapped (non-prelim): 166 length of query: 616 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 593 effective length of database: 17,143,297,704 effective search space: 10165975538472 effective search space used: 10165975538472 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)