ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbah62a06
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1FENR_MESCR (P41343) Ferredoxin--NADP reductase, chloroplast prec... 110 9e-25
2FENR1_ORYSA (P41344) Ferredoxin--NADP reductase, leaf isozyme, c... 108 4e-24
3FENR1_PEA (P10933) Ferredoxin--NADP reductase, leaf isozyme, chl... 106 2e-23
4FENR_SPIOL (P00455) Ferredoxin--NADP reductase, chloroplast prec... 105 3e-23
5FENR_VICFA (P41346) Ferredoxin--NADP reductase, chloroplast prec... 101 4e-22
6FENR1_TOBAC (O04977) Ferredoxin--NADP reductase, leaf-type isozy... 96 3e-20
7FENR_ANAVT (Q44549) Ferredoxin--NADP reductase (EC 1.18.1.2) (FNR) 71 6e-13
8FENR_ANASP (P58558) Ferredoxin--NADP reductase (EC 1.18.1.2) (FNR) 71 6e-13
9FENR_ANASO (P21890) Ferredoxin--NADP reductase (EC 1.18.1.2) (FNR) 70 1e-12
10FENR_SPISP (P00454) Ferredoxin--NADP reductase (EC 1.18.1.2) (FNR) 69 2e-12
11FENR_SYNP2 (P31973) Ferredoxin--NADP reductase (EC 1.18.1.2) (FNR) 67 8e-12
12FENR_SYNEL (Q93RE3) Ferredoxin--NADP reductase (EC 1.18.1.2) (FNR) 67 1e-11
13FENR_CYAPA (Q00598) Ferredoxin--NADP reductase, cyanelle precurs... 64 9e-11
14FENR_SYNY3 (Q55318) Ferredoxin--NADP reductase (EC 1.18.1.2) (FNR) 61 8e-10
15FENR2_TOBAC (O04397) Ferredoxin--NADP reductase, root-type isozy... 54 1e-07
16FENR2_ORYSA (P41345) Ferredoxin--NADP reductase, root isozyme, c... 52 3e-07
17FENR2_PEA (Q41014) Ferredoxin--NADP reductase, root isozyme, chl... 52 3e-07
18FENR3_ORYSA (O23877) Ferredoxin--NADP reductase, embryo isozyme,... 52 4e-07
19FENR_CHLRE (P53991) Ferredoxin--NADP reductase, chloroplast prec... 51 6e-07
20Y013_NPVAC (P41423) Hypothetical 38.7 kDa protein in PK1-LEF1 in... 29 2.5
21CYSJ_ZYMMO (Q5NRM1) Sulfite reductase [NADPH] flavoprotein alpha... 29 2.5
22FENR_IMPCY (P84210) Ferredoxin--NADP reductase, chloroplast (EC ... 28 5.6
23FBN3_HUMAN (Q75N90) Fibrillin-3 precursor 28 5.6
24YS42_CAEEL (Q09371) Hypothetical protein ZK177.2 28 5.6
25RL18_METKA (Q8TZA5) 50S ribosomal protein L18P 28 7.3
26SRE27_CAEEL (O62488) Serpentine receptor class epsilon-27 (Prote... 28 7.3
27THSA_THEAC (P48424) Thermosome subunit alpha (Thermosome subunit... 27 9.6

>FENR_MESCR (P41343) Ferredoxin--NADP reductase, chloroplast precursor (EC|
           1.18.1.2) (FNR)
          Length = 365

 Score =  110 bits (275), Expect = 9e-25
 Identities = 50/55 (90%), Positives = 53/55 (96%)
 Frame = -1

Query: 345 EMLKKDNTYVYMCGLKGMEKGIDDIMVDLAAKDGINWLDYKKQLKKAEQWNVEVY 181
           E+LKKDNTYVYMCGLKGMEKGIDDIMV LAA+DGI+W DYKKQLKKAEQWNVEVY
Sbjct: 311 ELLKKDNTYVYMCGLKGMEKGIDDIMVSLAAEDGIDWFDYKKQLKKAEQWNVEVY 365



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>FENR1_ORYSA (P41344) Ferredoxin--NADP reductase, leaf isozyme, chloroplast|
           precursor (EC 1.18.1.2) (FNR)
          Length = 362

 Score =  108 bits (269), Expect = 4e-24
 Identities = 49/55 (89%), Positives = 52/55 (94%)
 Frame = -1

Query: 345 EMLKKDNTYVYMCGLKGMEKGIDDIMVDLAAKDGINWLDYKKQLKKAEQWNVEVY 181
           E+LKKD+TYVYMCGLKGMEKGIDDIMV LAAKDGI+W DYKKQLKK EQWNVEVY
Sbjct: 308 ELLKKDHTYVYMCGLKGMEKGIDDIMVSLAAKDGIDWADYKKQLKKGEQWNVEVY 362



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>FENR1_PEA (P10933) Ferredoxin--NADP reductase, leaf isozyme, chloroplast|
           precursor (EC 1.18.1.2) (FNR)
          Length = 360

 Score =  106 bits (264), Expect = 2e-23
 Identities = 47/55 (85%), Positives = 53/55 (96%)
 Frame = -1

Query: 345 EMLKKDNTYVYMCGLKGMEKGIDDIMVDLAAKDGINWLDYKKQLKKAEQWNVEVY 181
           E+LKKDNT+VYMCGLKGMEKGIDDIMV LAAKDGI+W++YK+ LKKAEQWNVEVY
Sbjct: 306 ELLKKDNTFVYMCGLKGMEKGIDDIMVSLAAKDGIDWIEYKRTLKKAEQWNVEVY 360



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>FENR_SPIOL (P00455) Ferredoxin--NADP reductase, chloroplast precursor (EC|
           1.18.1.2) (FNR)
          Length = 369

 Score =  105 bits (262), Expect = 3e-23
 Identities = 47/55 (85%), Positives = 52/55 (94%)
 Frame = -1

Query: 345 EMLKKDNTYVYMCGLKGMEKGIDDIMVDLAAKDGINWLDYKKQLKKAEQWNVEVY 181
           EMLKKDNTY YMCGLKGMEKGIDDIMV LAA +GI+W++YK+QLKKAEQWNVEVY
Sbjct: 315 EMLKKDNTYFYMCGLKGMEKGIDDIMVSLAAAEGIDWIEYKRQLKKAEQWNVEVY 369



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>FENR_VICFA (P41346) Ferredoxin--NADP reductase, chloroplast precursor (EC|
           1.18.1.2) (FNR)
          Length = 363

 Score =  101 bits (252), Expect = 4e-22
 Identities = 44/55 (80%), Positives = 51/55 (92%)
 Frame = -1

Query: 345 EMLKKDNTYVYMCGLKGMEKGIDDIMVDLAAKDGINWLDYKKQLKKAEQWNVEVY 181
           E+LKKDNT+VYMCGLKGMEKGIDDIMV +  KDGI+W++YK+ LKKAEQWNVEVY
Sbjct: 309 ELLKKDNTFVYMCGLKGMEKGIDDIMVSIRPKDGIDWIEYKRTLKKAEQWNVEVY 363



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>FENR1_TOBAC (O04977) Ferredoxin--NADP reductase, leaf-type isozyme, chloroplast|
           precursor (EC 1.18.1.2) (FNR)
          Length = 362

 Score = 95.5 bits (236), Expect = 3e-20
 Identities = 42/54 (77%), Positives = 49/54 (90%)
 Frame = -1

Query: 342 MLKKDNTYVYMCGLKGMEKGIDDIMVDLAAKDGINWLDYKKQLKKAEQWNVEVY 181
           +L+KDNT++YMCGLKGME+GID+IM  LA +DGI W DYKKQLKKAEQWNVEVY
Sbjct: 309 LLQKDNTFIYMCGLKGMEQGIDEIMSALAERDGIVWADYKKQLKKAEQWNVEVY 362



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>FENR_ANAVT (Q44549) Ferredoxin--NADP reductase (EC 1.18.1.2) (FNR)|
          Length = 440

 Score = 71.2 bits (173), Expect = 6e-13
 Identities = 28/55 (50%), Positives = 42/55 (76%)
 Frame = -1

Query: 345 EMLKKDNTYVYMCGLKGMEKGIDDIMVDLAAKDGINWLDYKKQLKKAEQWNVEVY 181
           +++K + T+ Y+CGL+GME+GID  +   AAK+G+ W DY+K LKKA +W+VE Y
Sbjct: 386 QLIKNEKTHTYICGLRGMEEGIDAALSAAAAKEGVTWSDYQKDLKKAGRWHVETY 440



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>FENR_ANASP (P58558) Ferredoxin--NADP reductase (EC 1.18.1.2) (FNR)|
          Length = 440

 Score = 71.2 bits (173), Expect = 6e-13
 Identities = 28/55 (50%), Positives = 42/55 (76%)
 Frame = -1

Query: 345 EMLKKDNTYVYMCGLKGMEKGIDDIMVDLAAKDGINWLDYKKQLKKAEQWNVEVY 181
           +++K + T+ Y+CGL+GME+GID  +   AAK+G+ W DY+K LKKA +W+VE Y
Sbjct: 386 QLIKNEKTHTYICGLRGMEEGIDAALSAAAAKEGVTWSDYQKDLKKAGRWHVETY 440



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>FENR_ANASO (P21890) Ferredoxin--NADP reductase (EC 1.18.1.2) (FNR)|
          Length = 440

 Score = 70.5 bits (171), Expect = 1e-12
 Identities = 28/55 (50%), Positives = 41/55 (74%)
 Frame = -1

Query: 345 EMLKKDNTYVYMCGLKGMEKGIDDIMVDLAAKDGINWLDYKKQLKKAEQWNVEVY 181
           +++K   T+ Y+CGL+GME+GID  +   AAK+G+ W DY+K LKKA +W+VE Y
Sbjct: 386 QLIKNQKTHTYICGLRGMEEGIDAALSAAAAKEGVTWSDYQKDLKKAGRWHVETY 440



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>FENR_SPISP (P00454) Ferredoxin--NADP reductase (EC 1.18.1.2) (FNR)|
          Length = 294

 Score = 69.3 bits (168), Expect = 2e-12
 Identities = 29/55 (52%), Positives = 41/55 (74%)
 Frame = -1

Query: 345 EMLKKDNTYVYMCGLKGMEKGIDDIMVDLAAKDGINWLDYKKQLKKAEQWNVEVY 181
           E+++K NT+ Y+CGLKGME GID+ M   A K  ++W DY+K+LKK  +W+VE Y
Sbjct: 240 ELIQKPNTHTYICGLKGMEGGIDEGMSAAAGKFDVDWSDYQKELKKKHRWHVETY 294



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>FENR_SYNP2 (P31973) Ferredoxin--NADP reductase (EC 1.18.1.2) (FNR)|
          Length = 402

 Score = 67.4 bits (163), Expect = 8e-12
 Identities = 28/55 (50%), Positives = 40/55 (72%)
 Frame = -1

Query: 345 EMLKKDNTYVYMCGLKGMEKGIDDIMVDLAAKDGINWLDYKKQLKKAEQWNVEVY 181
           EM++K NT+VYMCGLKGM+  ID+     A K G+NW + ++ +KK  +W+VEVY
Sbjct: 348 EMIQKPNTHVYMCGLKGMQPPIDETFTAEAEKRGLNWEEMRRSMKKEHRWHVEVY 402



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>FENR_SYNEL (Q93RE3) Ferredoxin--NADP reductase (EC 1.18.1.2) (FNR)|
          Length = 386

 Score = 66.6 bits (161), Expect = 1e-11
 Identities = 30/56 (53%), Positives = 42/56 (75%), Gaps = 1/56 (1%)
 Frame = -1

Query: 345 EMLKKDNTYVYMCGLKGMEKGIDDIMVDLAAKDGINWLDY-KKQLKKAEQWNVEVY 181
           ++L+K NT+VYMCGL+GME GID+ M   AAK+G +W ++ K  LKK  +W+VE Y
Sbjct: 331 QLLQKKNTHVYMCGLRGMEPGIDEAMTAAAAKNGADWQEFLKGTLKKEGRWHVETY 386



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>FENR_CYAPA (Q00598) Ferredoxin--NADP reductase, cyanelle precursor (EC|
           1.18.1.2) (FNR)
          Length = 363

 Score = 63.9 bits (154), Expect = 9e-11
 Identities = 28/54 (51%), Positives = 37/54 (68%)
 Frame = -1

Query: 342 MLKKDNTYVYMCGLKGMEKGIDDIMVDLAAKDGINWLDYKKQLKKAEQWNVEVY 181
           M++K NT+VYMCGL+GME GI   M D+A  +G  W    K LKK ++W+VE Y
Sbjct: 310 MIQKPNTFVYMCGLRGMEDGIQQCMEDIAKANGTTWDAVVKGLKKEKRWHVETY 363



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>FENR_SYNY3 (Q55318) Ferredoxin--NADP reductase (EC 1.18.1.2) (FNR)|
          Length = 413

 Score = 60.8 bits (146), Expect = 8e-10
 Identities = 23/54 (42%), Positives = 37/54 (68%)
 Frame = -1

Query: 342 MLKKDNTYVYMCGLKGMEKGIDDIMVDLAAKDGINWLDYKKQLKKAEQWNVEVY 181
           +++   T+ YMCGLKGME GID+    LA ++G  W  +++++KK  +W+VE Y
Sbjct: 360 LMQNPKTHTYMCGLKGMEPGIDEAFTALAEQNGKEWTTFQREMKKEHRWHVETY 413



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>FENR2_TOBAC (O04397) Ferredoxin--NADP reductase, root-type isozyme, chloroplast|
           precursor (EC 1.18.1.2) (FNR)
          Length = 375

 Score = 53.5 bits (127), Expect = 1e-07
 Identities = 24/53 (45%), Positives = 33/53 (62%)
 Frame = -1

Query: 339 LKKDNTYVYMCGLKGMEKGIDDIMVDLAAKDGINWLDYKKQLKKAEQWNVEVY 181
           L  +  ++Y CGLKGM  GI D +  +A + G +W     QLKK +QW+VEVY
Sbjct: 323 LLDEGAHIYFCGLKGMMPGIQDTLKRVAERRGESWEQKLSQLKKNKQWHVEVY 375



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>FENR2_ORYSA (P41345) Ferredoxin--NADP reductase, root isozyme, chloroplast|
           precursor (EC 1.18.1.2) (FNR)
          Length = 378

 Score = 52.4 bits (124), Expect = 3e-07
 Identities = 23/47 (48%), Positives = 31/47 (65%)
 Frame = -1

Query: 321 YVYMCGLKGMEKGIDDIMVDLAAKDGINWLDYKKQLKKAEQWNVEVY 181
           ++Y CGLKGM  GI D +  +A + G +W     QLKK +QW+VEVY
Sbjct: 332 HIYFCGLKGMMPGIQDTLKKVAEQRGESWEQKLSQLKKNKQWHVEVY 378



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>FENR2_PEA (Q41014) Ferredoxin--NADP reductase, root isozyme, chloroplast|
           precursor (EC 1.18.1.2) (FNR)
          Length = 377

 Score = 52.4 bits (124), Expect = 3e-07
 Identities = 23/53 (43%), Positives = 34/53 (64%)
 Frame = -1

Query: 339 LKKDNTYVYMCGLKGMEKGIDDIMVDLAAKDGINWLDYKKQLKKAEQWNVEVY 181
           L  +  ++Y CGL+GM  GI + +  +A K G +W +   QLKK +QW+VEVY
Sbjct: 325 LLDNGAHIYFCGLRGMMPGIQETLKRVAEKRGESWEEKLSQLKKNKQWHVEVY 377



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>FENR3_ORYSA (O23877) Ferredoxin--NADP reductase, embryo isozyme, chloroplast|
           precursor (EC 1.18.1.2) (FNR)
          Length = 378

 Score = 52.0 bits (123), Expect = 4e-07
 Identities = 23/47 (48%), Positives = 31/47 (65%)
 Frame = -1

Query: 321 YVYMCGLKGMEKGIDDIMVDLAAKDGINWLDYKKQLKKAEQWNVEVY 181
           ++Y CGLKGM  GI D +  +A + G +W     QLKK +QW+VEVY
Sbjct: 332 HIYFCGLKGMMPGIQDTLKRVAEQRGESWEQKLSQLKKNKQWHVEVY 378



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>FENR_CHLRE (P53991) Ferredoxin--NADP reductase, chloroplast precursor (EC|
           1.18.1.2) (FNR)
          Length = 354

 Score = 51.2 bits (121), Expect = 6e-07
 Identities = 22/53 (41%), Positives = 35/53 (66%)
 Frame = -1

Query: 339 LKKDNTYVYMCGLKGMEKGIDDIMVDLAAKDGINWLDYKKQLKKAEQWNVEVY 181
           L  +  ++Y CGLKGM  GI D++  +A + G+N+ ++ + LK   QW+VEVY
Sbjct: 302 LLDNGAHMYFCGLKGMMPGIQDMLERVAKEKGLNYEEWVEGLKHKNQWHVEVY 354



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>Y013_NPVAC (P41423) Hypothetical 38.7 kDa protein in PK1-LEF1 intergenic|
           region
          Length = 327

 Score = 29.3 bits (64), Expect = 2.5
 Identities = 15/36 (41%), Positives = 20/36 (55%)
 Frame = -1

Query: 261 LAAKDGINWLDYKKQLKKAEQWNVEVY*SSSSCHCH 154
           +AA+D  N  DYKK    A+QW+  V   S  C+ H
Sbjct: 20  IAAEDRFNADDYKKYHINAQQWSHIVKWDSFKCNTH 55



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>CYSJ_ZYMMO (Q5NRM1) Sulfite reductase [NADPH] flavoprotein alpha-component (EC|
           1.8.1.2) (SIR-FP)
          Length = 606

 Score = 29.3 bits (64), Expect = 2.5
 Identities = 11/33 (33%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
 Frame = -1

Query: 339 LKKDNTYVYMCG-LKGMEKGIDDIMVDLAAKDG 244
           +K+D  Y+Y+CG    M K +D  ++D+  ++G
Sbjct: 549 IKEDGAYLYVCGDATHMAKDVDKALIDIIRQEG 581



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>FENR_IMPCY (P84210) Ferredoxin--NADP reductase, chloroplast (EC 1.18.1.2)|
           (FNR) (Fragments)
          Length = 37

 Score = 28.1 bits (61), Expect = 5.6
 Identities = 12/15 (80%), Positives = 14/15 (93%)
 Frame = -1

Query: 294 MEKGIDDIMVDLAAK 250
           + +GIDDIMVDLAAK
Sbjct: 23  VSRGIDDIMVDLAAK 37



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>FBN3_HUMAN (Q75N90) Fibrillin-3 precursor|
          Length = 2809

 Score = 28.1 bits (61), Expect = 5.6
 Identities = 13/41 (31%), Positives = 18/41 (43%)
 Frame = -1

Query: 174 SSSCHCHGRTCMLMFFPPSFHFYSRWILCKAQASAIYTPCI 52
           S SC C          PP FHF+    +CK     + +PC+
Sbjct: 746 SYSCSC----------PPGFHFWQDTEICKDVDECLSSPCV 776



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>YS42_CAEEL (Q09371) Hypothetical protein ZK177.2|
          Length = 296

 Score = 28.1 bits (61), Expect = 5.6
 Identities = 14/39 (35%), Positives = 21/39 (53%)
 Frame = -1

Query: 324 TYVYMCGLKGMEKGIDDIMVDLAAKDGINWLDYKKQLKK 208
           T V  C  KG  K ++ I+ +  +K  + W D K Q+KK
Sbjct: 23  TTVINCVSKGRHKDVNAIVRETESKKIVPWSDAKVQIKK 61



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>RL18_METKA (Q8TZA5) 50S ribosomal protein L18P|
          Length = 202

 Score = 27.7 bits (60), Expect = 7.3
 Identities = 8/19 (42%), Positives = 16/19 (84%)
 Frame = -1

Query: 315 YMCGLKGMEKGIDDIMVDL 259
           Y+CGL+ +E+GI+  ++D+
Sbjct: 91  YLCGLRALERGIERAVIDI 109



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>SRE27_CAEEL (O62488) Serpentine receptor class epsilon-27 (Protein sre-27)|
          Length = 364

 Score = 27.7 bits (60), Expect = 7.3
 Identities = 11/31 (35%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
 Frame = -3

Query: 187 GLLIIIIVSLP-WKDMHANVFPT*FSFLLQM 98
           G+  + + S+P WK  + N FP+ F FL+++
Sbjct: 298 GICTVAMYSIPAWKKRYKNAFPSIFCFLMRL 328



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>THSA_THEAC (P48424) Thermosome subunit alpha (Thermosome subunit 1)|
           (Chaperonin alpha subunit)
          Length = 545

 Score = 27.3 bits (59), Expect = 9.6
 Identities = 14/35 (40%), Positives = 19/35 (54%)
 Frame = -1

Query: 345 EMLKKDNTYVYMCGLKGMEKGIDDIMVDLAAKDGI 241
           E +KK    V +C     +KGIDD+     AK+GI
Sbjct: 278 EKIKKSGANVVLC-----QKGIDDVAQHYLAKEGI 307


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 39,020,863
Number of Sequences: 219361
Number of extensions: 624090
Number of successful extensions: 1739
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1716
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1738
length of database: 80,573,946
effective HSP length: 90
effective length of database: 60,831,456
effective search space used: 1459954944
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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