ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbah61l06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 456 e-125
2dbj|AK119540.1| Oryza sativa (japonica cultivar-group) cDNA clon... 456 e-125
3gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 456 e-125
4emb|AL731747.2|CNS08C7W Oryza sativa chromosome 12, . BAC OSJNBa... 456 e-125
5dbj|AK067367.1| Oryza sativa (japonica cultivar-group) cDNA clon... 444 e-121
6dbj|AK062059.1| Oryza sativa (japonica cultivar-group) cDNA clon... 200 4e-48
7gb|AY109575.1| Zea mays CL1708_1 mRNA sequence 151 3e-33
8gb|AY107637.1| Zea mays PCO086097 mRNA sequence 94 7e-16
9ref|NM_001036666.1| Arabidopsis thaliana EMB2726; RNA binding / ... 56 1e-04
10ref|NM_119050.2| Arabidopsis thaliana EMB2726; RNA binding / str... 56 1e-04
11gb|AY661462.1| Arabidopsis thaliana chloroplast polyprotein of e... 56 1e-04
12emb|AL161574.2|ATCHRIV70 Arabidopsis thaliana DNA chromosome 4, ... 56 1e-04
13emb|AL078469.2|ATF25O24 Arabidopsis thaliana DNA chromosome 4, B... 56 1e-04
14emb|AL078470.1|ATF19B15 Arabidopsis thaliana DNA chromosome 4, B... 56 1e-04
15gb|AY056792.1| Arabidopsis thaliana AT4g29060/F19B15_90 mRNA, co... 56 1e-04
16emb|BX828821.1|CNS0A2AV Arabidopsis thaliana Full-length cDNA Co... 56 1e-04
17emb|BX842656.1| Bdellovibrio bacteriovorus complete genome, stra... 54 6e-04
18dbj|AP006716.1| Staphylococcus haemolyticus JCSC1435 DNA, comple... 48 0.036
19dbj|BS000097.1| Pan troglodytes chromosome 22 clone:RP43-016D07,... 46 0.14
20gb|CP000141.1| Carboxydothermus hydrogenoformans Z-2901, complet... 44 0.57
21emb|CR727630.2|CNS0GODW Tetraodon nigroviridis full-length cDNA 44 0.57
22emb|CR664157.2|CNS0FBFN Tetraodon nigroviridis full-length cDNA 44 0.57
23emb|CR662603.2|CNS0FA8H Tetraodon nigroviridis full-length cDNA 44 0.57
24emb|CR645115.2|CNS0EWQP Tetraodon nigroviridis full-length cDNA 44 0.57
25emb|BX927154.1| Corynebacterium glutamicum ATCC 13032, IS finger... 44 0.57
26gb|AC144473.8| Medicago truncatula clone mth2-15l5, complete seq... 44 0.57
27dbj|BA000036.3| Corynebacterium glutamicum ATCC 13032 DNA, compl... 44 0.57
28gb|CP000153.1| Thiomicrospira denitrificans ATCC 33889, complete... 42 2.2
29gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete ge... 42 2.2
30emb|BX276104.14| Mouse DNA sequence from clone RP24-313E3 on chr... 42 2.2
31gb|AF512506.1| Morone saxatilis class IIIB myosin short isoform ... 42 2.2
32dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete g... 42 2.2
33gb|AC174772.1| Gasterosteus aculeatus clone VMRC28-84K14, comple... 42 2.2
34gb|AC146967.3| Bos taurus clone RP42-279M12, complete sequence 40 8.9
35gb|AC165972.4| Mus musculus BAC clone RP23-87D12 from chromosome... 40 8.9
36gb|AF025679.2| Schistosoma mansoni clone pSmPf5 SR2 subfamily B ... 40 8.9
37gb|AC104514.2| Drosophila melanogaster clone BACR22L21, complete... 40 8.9
38gb|AY661656.1| Sorghum bicolor clone BAC 88M4, complete sequence 40 8.9
39gb|AY603485.1| Exostoma labiatum ribosomal protein S7 (rpS7) gen... 40 8.9
40gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome 40 8.9
41gb|DP000008.1| Bos taurus target 1 genomic scaffold 40 8.9
42gb|AC115361.5| Mus musculus BAC clone RP24-76P12 from chromosome... 40 8.9
43gb|CP000316.1| Polaromonas sp. JS666, complete genome 40 8.9
44emb|AL022337.19|HS796E4 Human DNA sequence from clone CTA-796E4 ... 40 8.9
45emb|X83598.1|TTRTP T.thermophilus rpsB, tsf and pyrH genes 40 8.9
46emb|BX897699.1| Bartonella henselae strain Houston-1, complete g... 40 8.9
47emb|AL732464.19| Mouse DNA sequence from clone RP23-453F10 on ch... 40 8.9
48gb|AC112165.2| Homo sapiens chromosome 5 clone CTB-128F12, compl... 40 8.9
49gb|AC113370.2| Homo sapiens chromosome 5 clone RP11-124O5, compl... 40 8.9
50gb|AC093294.3| Homo sapiens chromosome 5 clone RP11-524C16, comp... 40 8.9
51gb|AC091500.1|AC091500 Drosophila melanogaster, chromosome 2R, r... 40 8.9
52dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.9
53dbj|AP001633.2| Oryza sativa (japonica cultivar-group) genomic D... 40 8.9
54dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete g... 40 8.9
55dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 40 8.9
56emb|BX005447.8| Zebrafish DNA sequence from clone DKEY-29B14, co... 40 8.9
57emb|BX088551.7| Zebrafish DNA sequence from clone CH211-106A19 i... 40 8.9
58gb|AC153868.3| Mus musculus BAC RP23-384D16 (Roswell Park Cancer... 40 8.9
59gb|AC153578.4| Mus musculus 6 BAC RP23-218P2 (Roswell Park Cance... 40 8.9
60gb|AF025673.1|AF025673 Schistosoma mansoni SR2 subfamily A non-L... 40 8.9
61gb|U50042.1|DDU50042 Dictyostelium discoideum repE homolog of UV... 40 8.9
62gb|AE003801.4| Drosophila melanogaster chromosome 2R, section 49... 40 8.9
63emb|CR942373.2| Xenopus tropicalis finished cDNA, clone TGas090b21 40 8.9
64gb|AE017221.1| Thermus thermophilus HB27, complete genome 40 8.9
65gb|AC004640.1|AC004640 Drosophila melanogaster DNA sequence (P1s... 40 8.9
66gb|AC122284.5| Mus musculus BAC clone RP23-246A5 from 6, complet... 40 8.9
67gb|AC142414.3| Mus musculus BAC clone RP23-372N15 from 8, comple... 40 8.9
68emb|AL806516.4| Mouse DNA sequence from clone RP23-453N20 on chr... 40 8.9
69gb|AC164983.2| Mus musculus BAC clone RP23-16J24 from chromosome... 40 8.9
70dbj|AB238686.1| Thiobacillus thioparus scnC, orf1, orf2, orf3, o... 40 8.9 
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score =  456 bits (230), Expect = e-125
 Identities = 356/398 (89%)
 Strand = Plus / Minus

                                                                            
Query: 251      aacctccgtaccttgatgttctcccccagaccagcgatcgtctccttcacgagatccttc 310
                |||||||||||||||||||||||||| ||    ||||||||||||||||| |||||||||
Sbjct: 21699747 aacctccgtaccttgatgttctccccaagggtggcgatcgtctccttcacaagatccttc 21699688

                                                                            
Query: 311      accgtcttgctgtcatccttgatgaagggctgctccaggagggccatcacgccgagcctc 370
                |||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||
Sbjct: 21699687 accgtcttgctgtcatccttgatgaaaggctgctccaggagggccagcacgccgagcctc 21699628

                                                                            
Query: 371      ttcgatatccgcccttccacgatcttctccctgatgttctcgggttttgactgcaggtcc 430
                ||||||||||| ||||| ||||||||||||||||||||||| ||||| ||||| ||||||
Sbjct: 21699627 ttcgatatccggccttcgacgatcttctccctgatgttctcaggtttggactgaaggtcc 21699568

                                                                            
Query: 431      tccctctgcatctcaatctccttctccttgctgacaatactctctggtatgtcgtccatt 490
                || ||||||||||||||||| ||||||||| |||||| ||||||||| ||||| || || 
Sbjct: 21699567 tctctctgcatctcaatctctttctccttgatgacaacactctctgggatgtcctctatg 21699508

                                                                            
Query: 491      gagacatattcgacctgcgggcatgccaccacttgcattgcgaggtcattcaccagctcc 550
                |||||||| || ||||| || ||||||||||| ||||| |||||||| ||||||||||||
Sbjct: 21699507 gagacatactcaacctgtggacatgccaccacctgcatcgcgaggtcgttcaccagctcc 21699448

                                                                            
Query: 551      ttgaatttctcattgcgagccacgaagtcggtctcagagttgatttcaatcatgcatcct 610
                ||||| ||||| ||||||||||||||||||||||| || ||||| ||||||||||| || 
Sbjct: 21699447 ttgaacttctcgttgcgagccacgaagtcggtctcggaattgatctcaatcatgcaacca 21699388

                                                      
Query: 611      atgcggttgtcgtggatgtacgatccaatcaggccttc 648
                || || ||||| |||||||| |  ||||| ||||||||
Sbjct: 21699387 atccgattgtcatggatgtaggcgccaattaggccttc 21699350



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 33/34 (97%)
 Strand = Plus / Minus

                                                  
Query: 160      atgaatcaaaatgtgcccaactcctgatgtcagg 193
                |||||||||||| |||||||||||||||||||||
Sbjct: 21699835 atgaatcaaaatatgcccaactcctgatgtcagg 21699802



 Score = 40.1 bits (20), Expect = 8.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                            
Query: 321      tgtcatccttgatgaagggctgctccag 348
                |||||| |||||||||||| ||||||||
Sbjct: 21698816 tgtcattcttgatgaagggttgctccag 21698789



 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 425      aggtcctccctctgcatctc 444
                ||||||||||||||||||||
Sbjct: 21698712 aggtcctccctctgcatctc 21698693
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>dbj|AK119540.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-204-C06, full
            insert sequence
          Length = 1368

 Score =  456 bits (230), Expect = e-125
 Identities = 356/398 (89%)
 Strand = Plus / Minus

                                                                        
Query: 251  aacctccgtaccttgatgttctcccccagaccagcgatcgtctccttcacgagatccttc 310
            |||||||||||||||||||||||||| ||    ||||||||||||||||| |||||||||
Sbjct: 1101 aacctccgtaccttgatgttctccccaagggtggcgatcgtctccttcacaagatccttc 1042

                                                                        
Query: 311  accgtcttgctgtcatccttgatgaagggctgctccaggagggccatcacgccgagcctc 370
            |||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||
Sbjct: 1041 accgtcttgctgtcatccttgatgaaaggctgctccaggagggccagcacgccgagcctc 982

                                                                        
Query: 371  ttcgatatccgcccttccacgatcttctccctgatgttctcgggttttgactgcaggtcc 430
            ||||||||||| ||||| ||||||||||||||||||||||| ||||| ||||| ||||||
Sbjct: 981  ttcgatatccggccttcgacgatcttctccctgatgttctcaggtttggactgaaggtcc 922

                                                                        
Query: 431  tccctctgcatctcaatctccttctccttgctgacaatactctctggtatgtcgtccatt 490
            || ||||||||||||||||| ||||||||| |||||| ||||||||| ||||| || || 
Sbjct: 921  tctctctgcatctcaatctctttctccttgatgacaacactctctgggatgtcctctatg 862

                                                                        
Query: 491  gagacatattcgacctgcgggcatgccaccacttgcattgcgaggtcattcaccagctcc 550
            |||||||| || ||||| || ||||||||||| ||||| |||||||| ||||||||||||
Sbjct: 861  gagacatactcaacctgtggacatgccaccacctgcatcgcgaggtcgttcaccagctcc 802

                                                                        
Query: 551  ttgaatttctcattgcgagccacgaagtcggtctcagagttgatttcaatcatgcatcct 610
            ||||| ||||| ||||||||||||||||||||||| || ||||| ||||||||||| || 
Sbjct: 801  ttgaacttctcgttgcgagccacgaagtcggtctcggaattgatctcaatcatgcaacca 742

                                                  
Query: 611  atgcggttgtcgtggatgtacgatccaatcaggccttc 648
            || || ||||| |||||||| |  ||||| ||||||||
Sbjct: 741  atccgattgtcatggatgtaggcgccaattaggccttc 704



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 33/34 (97%)
 Strand = Plus / Minus

                                              
Query: 160  atgaatcaaaatgtgcccaactcctgatgtcagg 193
            |||||||||||| |||||||||||||||||||||
Sbjct: 1189 atgaatcaaaatatgcccaactcctgatgtcagg 1156



 Score = 40.1 bits (20), Expect = 8.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 321 tgtcatccttgatgaagggctgctccag 348
           |||||| |||||||||||| ||||||||
Sbjct: 308 tgtcattcttgatgaagggttgctccag 281



 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 425 aggtcctccctctgcatctc 444
           ||||||||||||||||||||
Sbjct: 204 aggtcctccctctgcatctc 185
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score =  456 bits (230), Expect = e-125
 Identities = 356/398 (89%)
 Strand = Plus / Minus

                                                                            
Query: 251      aacctccgtaccttgatgttctcccccagaccagcgatcgtctccttcacgagatccttc 310
                |||||||||||||||||||||||||| ||    ||||||||||||||||| |||||||||
Sbjct: 21628092 aacctccgtaccttgatgttctccccaagggtggcgatcgtctccttcacaagatccttc 21628033

                                                                            
Query: 311      accgtcttgctgtcatccttgatgaagggctgctccaggagggccatcacgccgagcctc 370
                |||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||
Sbjct: 21628032 accgtcttgctgtcatccttgatgaaaggctgctccaggagggccagcacgccgagcctc 21627973

                                                                            
Query: 371      ttcgatatccgcccttccacgatcttctccctgatgttctcgggttttgactgcaggtcc 430
                ||||||||||| ||||| ||||||||||||||||||||||| ||||| ||||| ||||||
Sbjct: 21627972 ttcgatatccggccttcgacgatcttctccctgatgttctcaggtttggactgaaggtcc 21627913

                                                                            
Query: 431      tccctctgcatctcaatctccttctccttgctgacaatactctctggtatgtcgtccatt 490
                || ||||||||||||||||| ||||||||| |||||| ||||||||| ||||| || || 
Sbjct: 21627912 tctctctgcatctcaatctctttctccttgatgacaacactctctgggatgtcctctatg 21627853

                                                                            
Query: 491      gagacatattcgacctgcgggcatgccaccacttgcattgcgaggtcattcaccagctcc 550
                |||||||| || ||||| || ||||||||||| ||||| |||||||| ||||||||||||
Sbjct: 21627852 gagacatactcaacctgtggacatgccaccacctgcatcgcgaggtcgttcaccagctcc 21627793

                                                                            
Query: 551      ttgaatttctcattgcgagccacgaagtcggtctcagagttgatttcaatcatgcatcct 610
                ||||| ||||| ||||||||||||||||||||||| || ||||| ||||||||||| || 
Sbjct: 21627792 ttgaacttctcgttgcgagccacgaagtcggtctcggaattgatctcaatcatgcaacca 21627733

                                                      
Query: 611      atgcggttgtcgtggatgtacgatccaatcaggccttc 648
                || || ||||| |||||||| |  ||||| ||||||||
Sbjct: 21627732 atccgattgtcatggatgtaggcgccaattaggccttc 21627695



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 33/34 (97%)
 Strand = Plus / Minus

                                                  
Query: 160      atgaatcaaaatgtgcccaactcctgatgtcagg 193
                |||||||||||| |||||||||||||||||||||
Sbjct: 21628180 atgaatcaaaatatgcccaactcctgatgtcagg 21628147



 Score = 40.1 bits (20), Expect = 8.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                            
Query: 321      tgtcatccttgatgaagggctgctccag 348
                |||||| |||||||||||| ||||||||
Sbjct: 21627161 tgtcattcttgatgaagggttgctccag 21627134



 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 425      aggtcctccctctgcatctc 444
                ||||||||||||||||||||
Sbjct: 21627057 aggtcctccctctgcatctc 21627038
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>emb|AL731747.2|CNS08C7W Oryza sativa chromosome 12, . BAC OSJNBa0024C08 of library OSJNBa from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 186030

 Score =  456 bits (230), Expect = e-125
 Identities = 356/398 (89%)
 Strand = Plus / Plus

                                                                          
Query: 251    aacctccgtaccttgatgttctcccccagaccagcgatcgtctccttcacgagatccttc 310
              |||||||||||||||||||||||||| ||    ||||||||||||||||| |||||||||
Sbjct: 112804 aacctccgtaccttgatgttctccccaagggtggcgatcgtctccttcacaagatccttc 112863

                                                                          
Query: 311    accgtcttgctgtcatccttgatgaagggctgctccaggagggccatcacgccgagcctc 370
              |||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||
Sbjct: 112864 accgtcttgctgtcatccttgatgaaaggctgctccaggagggccagcacgccgagcctc 112923

                                                                          
Query: 371    ttcgatatccgcccttccacgatcttctccctgatgttctcgggttttgactgcaggtcc 430
              ||||||||||| ||||| ||||||||||||||||||||||| ||||| ||||| ||||||
Sbjct: 112924 ttcgatatccggccttcgacgatcttctccctgatgttctcaggtttggactgaaggtcc 112983

                                                                          
Query: 431    tccctctgcatctcaatctccttctccttgctgacaatactctctggtatgtcgtccatt 490
              || ||||||||||||||||| ||||||||| |||||| ||||||||| ||||| || || 
Sbjct: 112984 tctctctgcatctcaatctctttctccttgatgacaacactctctgggatgtcctctatg 113043

                                                                          
Query: 491    gagacatattcgacctgcgggcatgccaccacttgcattgcgaggtcattcaccagctcc 550
              |||||||| || ||||| || ||||||||||| ||||| |||||||| ||||||||||||
Sbjct: 113044 gagacatactcaacctgtggacatgccaccacctgcatcgcgaggtcgttcaccagctcc 113103

                                                                          
Query: 551    ttgaatttctcattgcgagccacgaagtcggtctcagagttgatttcaatcatgcatcct 610
              ||||| ||||| ||||||||||||||||||||||| || ||||| ||||||||||| || 
Sbjct: 113104 ttgaacttctcgttgcgagccacgaagtcggtctcggaattgatctcaatcatgcaacca 113163

                                                    
Query: 611    atgcggttgtcgtggatgtacgatccaatcaggccttc 648
              || || ||||| |||||||| |  ||||| ||||||||
Sbjct: 113164 atccgattgtcatggatgtaggcgccaattaggccttc 113201



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 33/34 (97%)
 Strand = Plus / Plus

                                                
Query: 160    atgaatcaaaatgtgcccaactcctgatgtcagg 193
              |||||||||||| |||||||||||||||||||||
Sbjct: 112716 atgaatcaaaatatgcccaactcctgatgtcagg 112749



 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 425    aggtcctccctctgcatctc 444
              ||||||||||||||||||||
Sbjct: 113839 aggtcctccctctgcatctc 113858



 Score = 40.1 bits (20), Expect = 8.9
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 321    tgtcatccttgatgaagggctgctccag 348
              |||||| |||||||||||| ||||||||
Sbjct: 113735 tgtcattcttgatgaagggttgctccag 113762
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>dbj|AK067367.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013106B18, full
            insert sequence
          Length = 3861

 Score =  444 bits (224), Expect = e-121
 Identities = 341/380 (89%)
 Strand = Plus / Minus

                                                                        
Query: 251  aacctccgtaccttgatgttctcccccagaccagcgatcgtctccttcacgagatccttc 310
            |||||||||||||||||||||||||| ||    ||||||||||||| ||| |||||||||
Sbjct: 3594 aacctccgtaccttgatgttctccccaagggtggcgatcgtctcctccacaagatccttc 3535

                                                                        
Query: 311  accgtcttgctgtcatccttgatgaagggctgctccaggagggccatcacgccgagcctc 370
            |||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||
Sbjct: 3534 accgtcttgctgtcatccttgatgaaaggctgctccaggagggccagcacgccgagcctc 3475

                                                                        
Query: 371  ttcgatatccgcccttccacgatcttctccctgatgttctcgggttttgactgcaggtcc 430
            ||||||||||| ||||| ||||||||||||||||||||||| ||||| ||||| ||||||
Sbjct: 3474 ttcgatatccggccttcgacgatcttctccctgatgttctcaggtttggactgaaggtcc 3415

                                                                        
Query: 431  tccctctgcatctcaatctccttctccttgctgacaatactctctggtatgtcgtccatt 490
            || ||||||||||||||||| ||||||||| |||||| ||||||||| ||||| || || 
Sbjct: 3414 tctctctgcatctcaatctctttctccttgatgacaacactctctgggatgtcctctatg 3355

                                                                        
Query: 491  gagacatattcgacctgcgggcatgccaccacttgcattgcgaggtcattcaccagctcc 550
            |||||||| || ||||| || ||||||||||| ||||| |||||||| ||||||||||||
Sbjct: 3354 gagacatactcaacctgtggacatgccaccacctgcatcgcgaggtcgttcaccagctcc 3295

                                                                        
Query: 551  ttgaatttctcattgcgagccacgaagtcggtctcagagttgatttcaatcatgcatcct 610
            ||||| ||||| ||||||||||||||||||||||| || ||||| ||||||||||| || 
Sbjct: 3294 ttgaacttctcgttgcgagccacgaagtcggtctcggaattgatctcaatcatgcaacca 3235

                                
Query: 611  atgcggttgtcgtggatgta 630
            || || ||||| ||||||||
Sbjct: 3234 atccgattgtcatggatgta 3215



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 33/34 (97%)
 Strand = Plus / Minus

                                              
Query: 160  atgaatcaaaatgtgcccaactcctgatgtcagg 193
            |||||||||||| |||||||||||||||||||||
Sbjct: 3682 atgaatcaaaatatgcccaactcctgatgtcagg 3649



 Score = 40.1 bits (20), Expect = 8.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 321  tgtcatccttgatgaagggctgctccag 348
            |||||| |||||||||||| ||||||||
Sbjct: 2801 tgtcattcttgatgaagggttgctccag 2774



 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 425  aggtcctccctctgcatctc 444
            ||||||||||||||||||||
Sbjct: 2697 aggtcctccctctgcatctc 2678
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>dbj|AK062059.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-044-C08, full
           insert sequence
          Length = 404

 Score =  200 bits (101), Expect = 4e-48
 Identities = 128/137 (93%)
 Strand = Plus / Minus

                                                                       
Query: 251 aacctccgtaccttgatgttctcccccagaccagcgatcgtctccttcacgagatccttc 310
           |||||||||||||||||||||||||| ||    ||||||||||||||||| |||||||||
Sbjct: 137 aacctccgtaccttgatgttctccccaagggtggcgatcgtctccttcacaagatccttc 78

                                                                       
Query: 311 accgtcttgctgtcatccttgatgaagggctgctccaggagggccatcacgccgagcctc 370
           |||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||
Sbjct: 77  accgtcttgctgtcatccttgatgaaaggctgctccaggagggccagcacgccgagcctc 18

                            
Query: 371 ttcgatatccgcccttc 387
           ||||||||||| |||||
Sbjct: 17  ttcgatatccggccttc 1



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 33/34 (97%)
 Strand = Plus / Minus

                                             
Query: 160 atgaatcaaaatgtgcccaactcctgatgtcagg 193
           |||||||||||| |||||||||||||||||||||
Sbjct: 225 atgaatcaaaatatgcccaactcctgatgtcagg 192
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>gb|AY109575.1| Zea mays CL1708_1 mRNA sequence
          Length = 2612

 Score =  151 bits (76), Expect = 3e-33
 Identities = 118/132 (89%)
 Strand = Plus / Minus

                                                                        
Query: 222  atcagttttcgccgagggtatacctgacaaacctccgtaccttgatgttctcccccagac 281
            ||||||| ||||| ||||| |||| |||||||||||| ||||| ||||||||||| ||  
Sbjct: 2362 atcagttctcgcccagggtgtaccggacaaacctccgcaccttaatgttctccccgagtg 2303

                                                                        
Query: 282  cagcgatcgtctccttcacgagatccttcaccgtcttgctgtcatccttgatgaagggct 341
              |||| |||||||||||||||||||||||||||||||||||| ||||||||| ||||||
Sbjct: 2302 aggcgaccgtctccttcacgagatccttcaccgtcttgctgtcgtccttgatgtagggct 2243

                        
Query: 342  gctccaggaggg 353
            ||||||||||||
Sbjct: 2242 gctccaggaggg 2231



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                 
Query: 86   agtaacaggtgatacaaaattatacatggaaccgagt 122
            |||||||||||||||  ||||| | ||||||||||||
Sbjct: 2519 agtaacaggtgatacggaattacagatggaaccgagt 2483
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>gb|AY107637.1| Zea mays PCO086097 mRNA sequence
          Length = 551

 Score = 93.7 bits (47), Expect = 7e-16
 Identities = 126/151 (83%), Gaps = 1/151 (0%)
 Strand = Plus / Minus

                                                                       
Query: 481 gtcgtccattgagacatattcgacctgcgggcatgccaccacttgcattgcg-aggtcat 539
           ||||||||  ||||| || |||| |||||| || |  ||||||||||| ||| ||||| |
Sbjct: 492 gtcgtccaacgagacgtagtcgaactgcggacacgttaccacttgcatcgcggaggtcgt 433

                                                                       
Query: 540 tcaccagctccttgaatttctcattgcgagccacgaagtcggtctcagagttgatttcaa 599
           ||||||||||| || | || || ||||| ||||||||||||||||| |||||||  || |
Sbjct: 432 tcaccagctccctggacttgtcgttgcgggccacgaagtcggtctcggagttgacctcga 373

                                          
Query: 600 tcatgcatcctatgcggttgtcgtggatgta 630
           ||||||| || |||||| |||||||||||||
Sbjct: 372 tcatgcacccgatgcggctgtcgtggatgta 342
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>ref|NM_001036666.1| Arabidopsis thaliana EMB2726; RNA binding / structural constituent of
            ribosome / translation elongation factor AT4G29060
            (EMB2726) transcript variant AT4G29060.2 mRNA, complete
            cds
          Length = 2616

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 58/68 (85%)
 Strand = Plus / Minus

                                                                        
Query: 383  ccttccacgatcttctccctgatgttctcgggttttgactgcaggtcctccctctgcatc 442
            |||||||| ||||||||||| |||||||| ||||| |||   || ||||| || ||||||
Sbjct: 2201 ccttccacaatcttctcccttatgttctctggtttcgacaaaagatcctctctttgcatc 2142

                    
Query: 443  tcaatctc 450
            ||||||||
Sbjct: 2141 tcaatctc 2134
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>ref|NM_119050.2| Arabidopsis thaliana EMB2726; RNA binding / structural constituent of
            ribosome / translation elongation factor AT4G29060
            (EMB2726) transcript variant AT4G29060.1 mRNA, complete
            cds
          Length = 3348

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 58/68 (85%)
 Strand = Plus / Minus

                                                                        
Query: 383  ccttccacgatcttctccctgatgttctcgggttttgactgcaggtcctccctctgcatc 442
            |||||||| ||||||||||| |||||||| ||||| |||   || ||||| || ||||||
Sbjct: 2933 ccttccacaatcttctcccttatgttctctggtttcgacaaaagatcctctctttgcatc 2874

                    
Query: 443  tcaatctc 450
            ||||||||
Sbjct: 2873 tcaatctc 2866
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>gb|AY661462.1| Arabidopsis thaliana chloroplast polyprotein of elongation factor Ts
            precursor, mRNA, complete cds, alternatively spliced;
            nuclear gene for chloroplast product
          Length = 2133

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 58/68 (85%)
 Strand = Plus / Minus

                                                                        
Query: 383  ccttccacgatcttctccctgatgttctcgggttttgactgcaggtcctccctctgcatc 442
            |||||||| ||||||||||| |||||||| ||||| |||   || ||||| || ||||||
Sbjct: 1970 ccttccacaatcttctcccttatgttctctggtttcgacaaaagatcctctctttgcatc 1911

                    
Query: 443  tcaatctc 450
            ||||||||
Sbjct: 1910 tcaatctc 1903
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>emb|AL161574.2|ATCHRIV70 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 70
          Length = 198429

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 58/68 (85%)
 Strand = Plus / Minus

                                                                         
Query: 383   ccttccacgatcttctccctgatgttctcgggttttgactgcaggtcctccctctgcatc 442
             |||||||| ||||||||||| |||||||| ||||| |||   || ||||| || ||||||
Sbjct: 49232 ccttccacaatcttctcccttatgttctctggtttcgacaaaagatcctctctttgcatc 49173

                     
Query: 443   tcaatctc 450
             ||||||||
Sbjct: 49172 tcaatctc 49165
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>emb|AL078469.2|ATF25O24 Arabidopsis thaliana DNA chromosome 4, BAC clone F25O24 (ESSA project)
          Length = 97714

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 58/68 (85%)
 Strand = Plus / Minus

                                                                         
Query: 383   ccttccacgatcttctccctgatgttctcgggttttgactgcaggtcctccctctgcatc 442
             |||||||| ||||||||||| |||||||| ||||| |||   || ||||| || ||||||
Sbjct: 74263 ccttccacaatcttctcccttatgttctctggtttcgacaaaagatcctctctttgcatc 74204

                     
Query: 443   tcaatctc 450
             ||||||||
Sbjct: 74203 tcaatctc 74196
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>emb|AL078470.1|ATF19B15 Arabidopsis thaliana DNA chromosome 4, BAC clone F19B15 (ESSA project)
          Length = 101679

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 58/68 (85%)
 Strand = Plus / Minus

                                                                         
Query: 383   ccttccacgatcttctccctgatgttctcgggttttgactgcaggtcctccctctgcatc 442
             |||||||| ||||||||||| |||||||| ||||| |||   || ||||| || ||||||
Sbjct: 32759 ccttccacaatcttctcccttatgttctctggtttcgacaaaagatcctctctttgcatc 32700

                     
Query: 443   tcaatctc 450
             ||||||||
Sbjct: 32699 tcaatctc 32692
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>gb|AY056792.1| Arabidopsis thaliana AT4g29060/F19B15_90 mRNA, complete cds
          Length = 3226

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 58/68 (85%)
 Strand = Plus / Minus

                                                                        
Query: 383  ccttccacgatcttctccctgatgttctcgggttttgactgcaggtcctccctctgcatc 442
            |||||||| ||||||||||| |||||||| ||||| |||   || ||||| || ||||||
Sbjct: 2907 ccttccacaatcttctcccttatgttctctggtttcgacaaaagatcctctctttgcatc 2848

                    
Query: 443  tcaatctc 450
            ||||||||
Sbjct: 2847 tcaatctc 2840
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>emb|BX828821.1|CNS0A2AV Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL42ZA04 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 951

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 58/68 (85%)
 Strand = Plus / Minus

                                                                       
Query: 383 ccttccacgatcttctccctgatgttctcgggttttgactgcaggtcctccctctgcatc 442
           |||||||| ||||||||||| |||||||| ||||| |||   || ||||| || ||||||
Sbjct: 657 ccttccacaatcttctcccttatgttctctggtttcgacaaaagatcctctctttgcatc 598

                   
Query: 443 tcaatctc 450
           ||||||||
Sbjct: 597 tcaatctc 590
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>emb|BX842656.1| Bdellovibrio bacteriovorus complete genome, strain HD100; segment 11/11
          Length = 307337

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 33/35 (94%)
 Strand = Plus / Minus

                                                 
Query: 566    cgagccacgaagtcggtctcagagttgatttcaat 600
              ||||| |||||||| ||||||||||||||||||||
Sbjct: 180440 cgagcaacgaagtcagtctcagagttgatttcaat 180406
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>dbj|AP006716.1| Staphylococcus haemolyticus JCSC1435 DNA, complete genome
          Length = 2685015

 Score = 48.1 bits (24), Expect = 0.036
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                       
Query: 560     tcattgcgagccacgaagtcggtctcagagttgatttcaa 599
               ||||| ||||| |||||||| || ||||||||||||||||
Sbjct: 1711095 tcattacgagctacgaagtcagtttcagagttgatttcaa 1711134
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>dbj|BS000097.1| Pan troglodytes chromosome 22 clone:RP43-016D07, map 22, complete
              sequences
          Length = 184809

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 158    tgatgaatcaaaatgtgcccaac 180
              |||||||||||||||||||||||
Sbjct: 133851 tgatgaatcaaaatgtgcccaac 133873
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>gb|CP000141.1| Carboxydothermus hydrogenoformans Z-2901, complete genome
          Length = 2401520

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 134     caaactagcaacagctatgcat 155
               ||||||||||||||||||||||
Sbjct: 2205587 caaactagcaacagctatgcat 2205608
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>emb|CR727630.2|CNS0GODW Tetraodon nigroviridis full-length cDNA
          Length = 1055

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                 
Query: 542 accagctccttgaatttctcattgcgagccacgaagtc 579
           ||||||| || ||| ||||||||||||||||| |||||
Sbjct: 441 accagctgctggaacttctcattgcgagccacaaagtc 404
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>emb|CR664157.2|CNS0FBFN Tetraodon nigroviridis full-length cDNA
          Length = 1131

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                 
Query: 542 accagctccttgaatttctcattgcgagccacgaagtc 579
           ||||||| || ||| ||||||||||||||||| |||||
Sbjct: 448 accagctgctggaacttctcattgcgagccacaaagtc 411
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>emb|CR662603.2|CNS0FA8H Tetraodon nigroviridis full-length cDNA
          Length = 1113

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                 
Query: 542 accagctccttgaatttctcattgcgagccacgaagtc 579
           ||||||| || ||| ||||||||||||||||| |||||
Sbjct: 441 accagctgctggaacttctcattgcgagccacaaagtc 404
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>emb|CR645115.2|CNS0EWQP Tetraodon nigroviridis full-length cDNA
          Length = 1143

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                 
Query: 542 accagctccttgaatttctcattgcgagccacgaagtc 579
           ||||||| || ||| ||||||||||||||||| |||||
Sbjct: 440 accagctgctggaacttctcattgcgagccacaaagtc 403
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>emb|BX927154.1| Corynebacterium glutamicum ATCC 13032, IS fingerprint type 4-5,
             complete genome; segment 7/10
          Length = 349575

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 572   acgaagtcggtctcagagttga 593
             ||||||||||||||||||||||
Sbjct: 14667 acgaagtcggtctcagagttga 14688
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>gb|AC144473.8| Medicago truncatula clone mth2-15l5, complete sequence
          Length = 128860

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 37/42 (88%)
 Strand = Plus / Plus

                                                       
Query: 521   acttgcattgcgaggtcattcaccagctccttgaatttctca 562
             ||||||||||| || ||||  |||| ||||||||||||||||
Sbjct: 33861 acttgcattgcaagatcatcaaccaactccttgaatttctca 33902
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>dbj|BA000036.3| Corynebacterium glutamicum ATCC 13032 DNA, complete genome
          Length = 3309401

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 572     acgaagtcggtctcagagttga 593
               ||||||||||||||||||||||
Sbjct: 2139592 acgaagtcggtctcagagttga 2139613
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>gb|CP000153.1| Thiomicrospira denitrificans ATCC 33889, complete genome
          Length = 2201561

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 575     aagtcggtctcagagttgatttcaa 599
               ||||| |||||||||||||||||||
Sbjct: 1883186 aagtcagtctcagagttgatttcaa 1883210
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>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome
          Length = 3696649

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 569    gccacgaagtcggtctcagagttga 593
              ||||||||||||||||| |||||||
Sbjct: 626699 gccacgaagtcggtctcggagttga 626675
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>emb|BX276104.14| Mouse DNA sequence from clone RP24-313E3 on chromosome 4, complete
             sequence
          Length = 152376

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 439   catctcaatctccttctcctt 459
             |||||||||||||||||||||
Sbjct: 94449 catctcaatctccttctcctt 94429
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>gb|AF512506.1| Morone saxatilis class IIIB myosin short isoform mRNA, complete cds
          Length = 4020

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 328 cttgatgaagggctgctccaggagg 352
           |||||||||||| ||||||||||||
Sbjct: 903 cttgatgaagggatgctccaggagg 879
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>dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete genome
          Length = 3147090

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 569     gccacgaagtcggtctcagagttga 593
               ||||||||||||||||| |||||||
Sbjct: 2023642 gccacgaagtcggtctcggagttga 2023666
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>gb|AC174772.1| Gasterosteus aculeatus clone VMRC28-84K14, complete sequence
          Length = 121286

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 328   cttgatgaagggctgctccaggagg 352
             |||||||||||| ||||||||||||
Sbjct: 45451 cttgatgaagggatgctccaggagg 45475
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>gb|AC146967.3| Bos taurus clone RP42-279M12, complete sequence
          Length = 186611

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 323    tcatccttgatgaagggctg 342
              ||||||||||||||||||||
Sbjct: 136263 tcatccttgatgaagggctg 136244
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>gb|AC165972.4| Mus musculus BAC clone RP23-87D12 from chromosome 17, complete sequence
          Length = 199737

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 420    actgcaggtcctccctctgc 439
              ||||||||||||||||||||
Sbjct: 128161 actgcaggtcctccctctgc 128180
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>gb|AF025679.2| Schistosoma mansoni clone pSmPf5 SR2 subfamily B non-LTR
            retrotransposon within SR2 subfamily B non-LTR
            retrotransposon
          Length = 3687

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 427  gtcctccctctgcatctcaa 446
            ||||||||||||||||||||
Sbjct: 1086 gtcctccctctgcatctcaa 1105
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>gb|AC104514.2| Drosophila melanogaster clone BACR22L21, complete sequence
          Length = 170718

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 120   agtacaactgagtacaaact 139
             ||||||||||||||||||||
Sbjct: 13521 agtacaactgagtacaaact 13502
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>gb|AY661656.1| Sorghum bicolor clone BAC 88M4, complete sequence
          Length = 279448

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 391   gatcttctccctgatgttct 410
             ||||||||||||||||||||
Sbjct: 38394 gatcttctccctgatgttct 38413
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>gb|AY603485.1| Exostoma labiatum ribosomal protein S7 (rpS7) gene, exons 2, 3 and
           partial cds
          Length = 167

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 391 gatcttctccctgatgttct 410
           ||||||||||||||||||||
Sbjct: 66  gatcttctccctgatgttct 85
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>gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome
          Length = 5650368

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 326    tccttgatgaagggctgctc 345
              ||||||||||||||||||||
Sbjct: 692770 tccttgatgaagggctgctc 692751
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>gb|DP000008.1| Bos taurus target 1 genomic scaffold
          Length = 2072671

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 323     tcatccttgatgaagggctg 342
               ||||||||||||||||||||
Sbjct: 2022323 tcatccttgatgaagggctg 2022304
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>gb|AC115361.5| Mus musculus BAC clone RP24-76P12 from chromosome 8, complete sequence
          Length = 235095

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 94    gtgatacaaaattatacatg 113
             ||||||||||||||||||||
Sbjct: 59225 gtgatacaaaattatacatg 59206
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>gb|CP000316.1| Polaromonas sp. JS666, complete genome
          Length = 5200264

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 543     ccagctccttgaatttctca 562
               ||||||||||||||||||||
Sbjct: 2458727 ccagctccttgaatttctca 2458746
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>emb|AL022337.19|HS796E4 Human DNA sequence from clone CTA-796E4 on chromosome 22q11.22-12.1,
             complete sequence
          Length = 134205

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 432   ccctctgcatctcaatctccttctcctt 459
             |||||||||||||  |||||||||||||
Sbjct: 25744 ccctctgcatctctctctccttctcctt 25771
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>emb|X83598.1|TTRTP T.thermophilus rpsB, tsf and pyrH genes
          Length = 1124

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 321 tgtcatccttgatgaagggctgctccag 348
           |||| ||||||| |||||||||||||||
Sbjct: 763 tgtcgtccttgacgaagggctgctccag 736
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>emb|BX897699.1| Bartonella henselae strain Houston-1, complete genome
          Length = 1931047

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 388     cacgatcttctccctgatgttctc 411
               |||||||||||||||| |||||||
Sbjct: 1613909 cacgatcttctccctgttgttctc 1613932
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>emb|AL732464.19| Mouse DNA sequence from clone RP23-453F10 on chromosome 4, complete
              sequence
          Length = 192919

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 157    atgatgaatcaaaatgtgcc 176
              ||||||||||||||||||||
Sbjct: 105574 atgatgaatcaaaatgtgcc 105593
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>gb|AC112165.2| Homo sapiens chromosome 5 clone CTB-128F12, complete sequence
          Length = 113127

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 418   tgactgcaggtcctccctct 437
             ||||||||||||||||||||
Sbjct: 91440 tgactgcaggtcctccctct 91421
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>gb|AC113370.2| Homo sapiens chromosome 5 clone RP11-124O5, complete sequence
          Length = 189590

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 97    atacaaaattatacatggaa 116
             ||||||||||||||||||||
Sbjct: 20012 atacaaaattatacatggaa 20031
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>gb|AC093294.3| Homo sapiens chromosome 5 clone RP11-524C16, complete sequence
          Length = 171739

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 97     atacaaaattatacatggaa 116
              ||||||||||||||||||||
Sbjct: 138397 atacaaaattatacatggaa 138416
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>gb|AC091500.1|AC091500 Drosophila melanogaster, chromosome 2R, region 54F-55A, BAC clone
              BACR20E20, complete sequence
          Length = 164567

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 120    agtacaactgagtacaaact 139
              ||||||||||||||||||||
Sbjct: 163386 agtacaactgagtacaaact 163367
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 66      ggtttggaaccaggaacgat 85
               ||||||||||||||||||||
Sbjct: 6355298 ggtttggaaccaggaacgat 6355279
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>dbj|AP001633.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0515G01
          Length = 175072

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 66     ggtttggaaccaggaacgat 85
              ||||||||||||||||||||
Sbjct: 126364 ggtttggaaccaggaacgat 126345
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>dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete genome
          Length = 1849742

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 321    tgtcatccttgatgaagggctgctccag 348
              |||| ||||||| |||||||||||||||
Sbjct: 821364 tgtcgtccttgacgaagggctgctccag 821391
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>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                               
Query: 572     acgaagtcggtctcagagttgatttcaatcat 603
               |||||||||||||| |||||||| || |||||
Sbjct: 4278544 acgaagtcggtctcggagttgatctcgatcat 4278575
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>emb|BX005447.8| Zebrafish DNA sequence from clone DKEY-29B14, complete sequence
          Length = 283185

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 133    acaaactagcaacagctatg 152
              ||||||||||||||||||||
Sbjct: 181005 acaaactagcaacagctatg 181024
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>emb|BX088551.7| Zebrafish DNA sequence from clone CH211-106A19 in linkage group 5,
             complete sequence
          Length = 184417

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 133   acaaactagcaacagctatg 152
             ||||||||||||||||||||
Sbjct: 69372 acaaactagcaacagctatg 69353
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>gb|AC153868.3| Mus musculus BAC RP23-384D16 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 211603

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 249    caaacctccgtaccttgatgttct 272
              ||||||||| ||||||||||||||
Sbjct: 188425 caaacctccctaccttgatgttct 188402
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>gb|AC153578.4| Mus musculus 6 BAC RP23-218P2 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 228417

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 249    caaacctccgtaccttgatgttct 272
              ||||||||| ||||||||||||||
Sbjct: 109844 caaacctccctaccttgatgttct 109821
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>gb|AF025673.1|AF025673 Schistosoma mansoni SR2 subfamily A non-LTR retrotransposon,
           internal fragment BS7, reverse transcriptase (pol) gene,
           partial cds
          Length = 966

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 427 gtcctccctctgcatctcaa 446
           ||||||||||||||||||||
Sbjct: 495 gtcctccctctgcatctcaa 514
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>gb|U50042.1|DDU50042 Dictyostelium discoideum repE homolog of UV-damaged DNA binding
           protein (repE) gene, complete cds
          Length = 4122

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 89  aacaggtgatacaaaattatacat 112
           ||||| ||||||||||||||||||
Sbjct: 373 aacagttgatacaaaattatacat 350
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>gb|AE003801.4| Drosophila melanogaster chromosome 2R, section 49 of 73 of the complete
             sequence
          Length = 254899

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 120   agtacaactgagtacaaact 139
             ||||||||||||||||||||
Sbjct: 90643 agtacaactgagtacaaact 90624
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>emb|CR942373.2| Xenopus tropicalis finished cDNA, clone TGas090b21
          Length = 2585

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 420 actgcaggtcctccctctgc 439
           ||||||||||||||||||||
Sbjct: 759 actgcaggtcctccctctgc 740
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>gb|AE017221.1| Thermus thermophilus HB27, complete genome
          Length = 1894877

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 321    tgtcatccttgatgaagggctgctccag 348
              |||| ||||||| |||||||||||||||
Sbjct: 492444 tgtcgtccttgacgaagggctgctccag 492471
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>gb|AC004640.1|AC004640 Drosophila melanogaster DNA sequence (P1s DS07528 (D169) and DS06665
             (D220)), complete sequence
          Length = 79248

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 120   agtacaactgagtacaaact 139
             ||||||||||||||||||||
Sbjct: 67887 agtacaactgagtacaaact 67868
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>gb|AC122284.5| Mus musculus BAC clone RP23-246A5 from 6, complete sequence
          Length = 189521

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 249    caaacctccgtaccttgatgttct 272
              ||||||||| ||||||||||||||
Sbjct: 160269 caaacctccctaccttgatgttct 160292
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>gb|AC142414.3| Mus musculus BAC clone RP23-372N15 from 8, complete sequence
          Length = 192261

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 94    gtgatacaaaattatacatg 113
             ||||||||||||||||||||
Sbjct: 66679 gtgatacaaaattatacatg 66698
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>emb|AL806516.4| Mouse DNA sequence from clone RP23-453N20 on chromosome X, complete
             sequence
          Length = 179534

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 124   caactgagtacaaactagca 143
             ||||||||||||||||||||
Sbjct: 79655 caactgagtacaaactagca 79674
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>gb|AC164983.2| Mus musculus BAC clone RP23-16J24 from chromosome 17, complete sequence
          Length = 224370

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 420    actgcaggtcctccctctgc 439
              ||||||||||||||||||||
Sbjct: 196252 actgcaggtcctccctctgc 196271
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>dbj|AB238686.1| Thiobacillus thioparus scnC, orf1, orf2, orf3, orf4, orf5 genes for
            thiocyanate hydrolase gamma subunit, thiocyanate
            hydrolase activator, putative ABC transporter subunit,
            putative ABC transporter subunit, putative ABC
            transporter subunit, putative ABC transporter subunit,
            partial and complete cds
          Length = 4910

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 300  cgagatccttcaccgtcttg 319
            ||||||||||||||||||||
Sbjct: 2491 cgagatccttcaccgtcttg 2472


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,894,925
Number of Sequences: 3902068
Number of extensions: 4894925
Number of successful extensions: 92230
Number of sequences better than 10.0: 71
Number of HSP's better than 10.0 without gapping: 71
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 91746
Number of HSP's gapped (non-prelim): 477
length of query: 649
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 626
effective length of database: 17,143,297,704
effective search space: 10731704362704
effective search space used: 10731704362704
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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