>CO4_MOUSE (P01029) Complement C4 precursor [Contains: Complement C4 beta|
           chain; Complement C4 alpha chain; C4a anaphylatoxin;
           Complement C4 gamma chain]
          Length = 1738

 Score = 33.5 bits (75), Expect = 0.59
 Identities = 26/118 (22%), Positives = 44/118 (37%), Gaps = 3/118 (2%)
 Frame = +1

Query: 103 SGLQFKDSTKLI*VSMEFGCPHPYRNDRT*SALFQRCSSPSF*ATICLLVATHGTPPGFR 282
           +GL F D  +L     +  CP   ++ +  +  FQ+  S               + P  +
Sbjct: 648 AGLAFSDGDRLTQTREDLSCPKEKKSRQKRNVNFQKAVSEKL---------GQYSSPDAK 698

Query: 283 TCTQHQLSFCSLV*SCRNSS*RAP---CEAAELSACRVAGISERGRTHHMVEPQRNSH 447
            C Q  ++   +  +C   + R P   C    LS C+ A    R +T       RN+H
Sbjct: 699 RCCQDGMTKLPMKRTCEQRAARVPQQACREPFLSCCKFAEDLRRNQTRSQAHLARNNH 756

>BSP1_CANGA (Q6FQG3) Protein BSP1|
          Length = 525

 Score = 32.0 bits (71), Expect = 1.7
 Identities = 22/83 (26%), Positives = 35/83 (42%)
 Frame = -1

Query: 601 HGADSETGDAESRILSYQKISVIPEASTTGNVASKAGEHIPKVDEFKGRRCGGCFSEVLP 422
           +G +SE  D+E   ++ +  SV+  A+T+G + SK   H+P     +    G   S    
Sbjct: 445 NGEESEISDSEPESINNKLESVLKRANTSGQIGSKHIGHLPP----RAATTGDLLS---- 496

Query: 421 CGACAPSRKSQPHDKQRAPRPRK 353
                   K +PH  Q    P K
Sbjct: 497 --------KKEPHTTQSLSHPNK 511

>CEP68_MOUSE (Q8C0D9) Centrosomal protein of 68 kDa (Cep68 protein)|
          Length = 733

 Score = 31.2 bits (69), Expect = 2.9
 Identities = 26/85 (30%), Positives = 36/85 (42%), Gaps = 2/85 (2%)
 Frame = +3

Query: 345 KSPLRGRGALCLSCGWDFREGAHAPHGRTSEKQPPQRRPLNSSTFGMCSPAFEATFPVVD 524
           ++ LRG    CL  G D R G  +P  +T EK+PP  R         C       +P  +
Sbjct: 398 EAALRGTAEDCLPIGEDLRMG--SPQLKTKEKEPPFPRQKRGRQHVSCPACVTPGWPSEE 455

Query: 525 ASGMTEIFW*L--RILDSASPVSLS 593
             G  E +  L  R+   +S VS S
Sbjct: 456 EVGSDEEYLALPTRLTQVSSLVSYS 480

>ATG5_EMENI (Q5B2Q6) Autophagy protein 5|
          Length = 482

 Score = 30.4 bits (67), Expect = 5.0
 Identities = 16/54 (29%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
 Frame = +2

Query: 11  DGFYX--AVPLQFRRPIGQYSDIYDAHLESDSGAGCSSKTRLN*SKFPWNLVAH 166
           DG++    VPL++  P+G    +YD +  ++     S    L+  + PW LV H
Sbjct: 183 DGWFSFEGVPLKWHYPVGL---LYDLYAGAEPATKSSETEALDDEQLPWRLVVH 233

>PALC_EMENI (Q9P905) pH-response regulator protein palC|
          Length = 507

 Score = 30.0 bits (66), Expect = 6.6
 Identities = 18/52 (34%), Positives = 25/52 (48%)
 Frame = -3

Query: 392 PATRQAESSAASQGALQLLFLQDQTRLQNES*CCVQVRNPGGVPWVATSKHI 237
           PAT+ A SS A   A  L  L+D + +      C+Q RNP    W+  +  I
Sbjct: 212 PATQAALSSLALAEATLLTVLKDDSYVV----ACIQARNPNDKDWMVRAPEI 259

>YO97_CAEEL (P41847) Hypothetical protein T20B12.7|
          Length = 238

 Score = 29.6 bits (65), Expect = 8.6
 Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 7/65 (10%)
 Frame = -1

Query: 655 PPLPGQPKEKASRILGC------LHGADSETGDAESRILSYQKISVIPE-ASTTGNVASK 497
           P + G    K +R++G       L GADS  GD E  I+  Q+  ++ E  +T  +V  +
Sbjct: 21  PLVDGTNGVKGTRVVGSVSNARELRGADSLVGDVERAIIQVQETELLAEVCNTVFDVMKQ 80

Query: 496 AGEHI 482
            GE I
Sbjct: 81  NGEVI 85


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 102,182,245
Number of Sequences: 219361
Number of extensions: 2166386
Number of successful extensions: 5925
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 5616
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5922
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6484657212
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)