Clone Name | rbah61l03 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | NPP_HORVU (Q687E1) Nucleotide pyrophosphatase/phosphodiesterase ... | 205 | 6e-53 | 2 | PPA_ASPFI (Q12546) Acid phosphatase precursor (EC 3.1.3.2) (pH 6... | 38 | 0.017 | 3 | DSCAM_HUMAN (O60469) Down syndrome cell adhesion molecule precur... | 29 | 7.8 | 4 | XRCC2_HUMAN (O43543) DNA-repair protein XRCC2 (X-ray repair cros... | 29 | 7.8 |
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>NPP_HORVU (Q687E1) Nucleotide pyrophosphatase/phosphodiesterase (EC 3.-.-.-)| (Fragments) Length = 368 Score = 205 bits (521), Expect = 6e-53 Identities = 96/97 (98%), Positives = 96/97 (98%) Frame = -3 Query: 489 NADKTHYSGTMNGTXFVVAGGGGSHLSSYTTAIPKWSIFRDHDYGFTKLTAFNHSSLLFE 310 NADKTHYSGTMNGT FVVAGGGGSHLSSYTTAIPKWSIFRDHDYGFTKLTAFNHSSLLFE Sbjct: 272 NADKTHYSGTMNGTIFVVAGGGGSHLSSYTTAIPKWSIFRDHDYGFTKLTAFNHSSLLFE 331 Query: 309 YMKSSDGKVYDSFTIHRDYRDVLSCVHDSCFPTTLAS 199 YMKSSDGKVYDSFTIHRDYRDVLSCVHDSCFPTTLAS Sbjct: 332 YMKSSDGKVYDSFTIHRDYRDVLSCVHDSCFPTTLAS 368
>PPA_ASPFI (Q12546) Acid phosphatase precursor (EC 3.1.3.2) (pH 6-optimum acid| phosphatase) (APase6) Length = 614 Score = 37.7 bits (86), Expect = 0.017 Identities = 16/32 (50%), Positives = 23/32 (71%) Frame = -3 Query: 360 YGFTKLTAFNHSSLLFEYMKSSDGKVYDSFTI 265 YGF+KLT FN ++L +E ++ DG V DS T+ Sbjct: 569 YGFSKLTIFNETALKWELIRGDDGTVGDSLTL 600
>DSCAM_HUMAN (O60469) Down syndrome cell adhesion molecule precursor (CHD2)| Length = 2012 Score = 28.9 bits (63), Expect = 7.8 Identities = 10/26 (38%), Positives = 16/26 (61%) Frame = -3 Query: 348 KLTAFNHSSLLFEYMKSSDGKVYDSF 271 ++T NH +L+ ++M SDG Y F Sbjct: 361 RITGINHENLIMDHMVKSDGGAYQCF 386
>XRCC2_HUMAN (O43543) DNA-repair protein XRCC2 (X-ray repair cross-complementing| protein 2) Length = 280 Score = 28.9 bits (63), Expect = 7.8 Identities = 14/35 (40%), Positives = 21/35 (60%), Gaps = 3/35 (8%) Frame = +3 Query: 60 THLLHDLFTSTYKLCS*P---ILLLNTCPQFYWMD 155 THLL L++ CS P +L+L++ FYW+D Sbjct: 124 THLLLTLYSLESMFCSHPSLCLLILDSLSAFYWID 158 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 57,046,281 Number of Sequences: 219361 Number of extensions: 1072080 Number of successful extensions: 2399 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 2358 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2399 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3478785780 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)