Clone Name | rbah62a02 |
---|---|
Clone Library Name | barley_pub |
>EWG_DROME (Q24312) DNA-binding protein Ewg (Protein erect wing)| Length = 733 Score = 33.9 bits (76), Expect = 0.37 Identities = 23/65 (35%), Positives = 28/65 (43%) Frame = -2 Query: 550 LPTGRSLPTTGVDPTHPTTGVTHPAMVIATVQDPHTVTEGGGHAPMTVMFQHTTAGAILQ 371 LP G + GV H G AT+Q ++T+ GH MTV T G I Sbjct: 569 LPDGTTAQVQGVATLHQGEGG-------ATIQTVQSLTDVNGHENMTVDLTETQDGQIYI 621 Query: 370 GTEDG 356 TEDG Sbjct: 622 TTEDG 626
>METK_BACHD (Q9K7Q9) S-adenosylmethionine synthetase (EC 2.5.1.6) (Methionine| adenosyltransferase) (AdoMet synthetase) (MAT) Length = 399 Score = 30.4 bits (67), Expect = 4.0 Identities = 12/27 (44%), Positives = 17/27 (62%) Frame = -2 Query: 346 AAYHHAGATPVAAPWRQKNQGAVLRRK 266 AAY H G T V PW Q ++ +LR++ Sbjct: 372 AAYGHFGRTDVELPWEQTDKAEILRQQ 398
>PTPRG_HUMAN (P23470) Receptor-type tyrosine-protein phosphatase gamma precursor| (EC 3.1.3.48) (Protein-tyrosine phosphatase gamma) (R-PTP-gamma) Length = 1445 Score = 30.4 bits (67), Expect = 4.0 Identities = 20/57 (35%), Positives = 26/57 (45%), Gaps = 4/57 (7%) Frame = -2 Query: 592 GHPTLPMAEGDHTLLPT----GRSLPTTGVDPTHPTTGVTHPAMVIATVQDPHTVTE 434 GH T+P E DHT +PT GR G+DP ++ + Q P T TE Sbjct: 637 GHQTIPGHEQDHTAVPTDQTGGRRDAGPGLDPD-----------MVTSTQVPPTATE 682
>KR10A_HUMAN (P60014) Keratin-associated protein 10-10 (Keratin-associated| protein 10.10) (High sulfur keratin-associated protein 10.10) (Keratin-associated protein 18-10) (Keratin-associated protein 18.10) Length = 251 Score = 30.0 bits (66), Expect = 5.3 Identities = 32/127 (25%), Positives = 51/127 (40%), Gaps = 9/127 (7%) Frame = +2 Query: 218 SQSQVTCC-AMPCFQHILSAENSSLILLTPGSSYGSSSCVVIRCESNSVFCSLENSACC- 391 S Q TCC + PC Q S + P S S+SC C+ +S + ++CC Sbjct: 130 SSCQPTCCTSSPCQQACCVPVCSKSVCYVPVCSGASTSC----CQQSSCQPACCTASCCR 185 Query: 392 -----SMLKHNGHGSMTSAFCNCMGILNGGDDHSGVSDACRRVSRIYA--CGRETPTCRK 550 S+L H + + C C+ + + G S +C R + + C P C + Sbjct: 186 PSSSVSLLCH----PVCKSTC-CVPVPSCGASASSCQPSCCRTASCVSLLC---RPVCSR 237 Query: 551 ESMISFC 571 + S C Sbjct: 238 PACYSLC 244
>ZP1_RAT (O54766) Zona pellucida sperm-binding protein 1 precursor (Zona| pellucida glycoprotein 1) (Zp-1) Length = 617 Score = 29.6 bits (65), Expect = 6.9 Identities = 20/64 (31%), Positives = 25/64 (39%) Frame = -2 Query: 583 TLPMAEGDHTLLPTGRSLPTTGVDPTHPTTGVTHPAMVIATVQDPHTVTEGGGHAPMTVM 404 TL + DH L P P T P P T HP HT+ G GH +T + Sbjct: 125 TLICPKPDHILTPESYLAPPTTPQPFIPHTFALHPI-------SGHTLA-GSGHTGLTTL 176 Query: 403 FQHT 392 + T Sbjct: 177 YPET 180
>METH_MYCLE (Q49775) Methionine synthase (EC 2.1.1.13)| (5-methyltetrahydrofolate--homocysteine methyltransferase) (Methionine synthase, vitamin-B12 dependent isozyme) (MS) Length = 1206 Score = 29.6 bits (65), Expect = 6.9 Identities = 16/47 (34%), Positives = 22/47 (46%) Frame = -2 Query: 466 ATVQDPHTVTEGGGHAPMTVMFQHTTAGAILQGTEDGVTLAAYHHAG 326 A + +T+ G H P+ V T G +L G+E G LAA G Sbjct: 179 AVLGSRRAMTQAGRHIPVFVHVTVETTGTMLLGSEIGAALAAVEPLG 225
>DAF_CAVPO (Q60401) Complement decay-accelerating factor precursor (CD55| antigen) [Contains: Complement decay-accelerating factor, GPI-anchored isoform] Length = 507 Score = 29.3 bits (64), Expect = 9.0 Identities = 21/63 (33%), Positives = 23/63 (36%), Gaps = 4/63 (6%) Frame = -2 Query: 586 PTLPMAEGDHTLLPTGRSLPTTGVDPTHPT----TGVTHPAMVIATVQDPHTVTEGGGHA 419 PT A G T LPT + P PT T V P + T Q TV G Sbjct: 295 PTTTSAPGTTTTLPTQKPTTVNTAGPEVPTTQRSTTVNVPGTKVPTTQRSTTVNVPGTEV 354 Query: 418 PMT 410 P T Sbjct: 355 PTT 357 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 72,111,733 Number of Sequences: 219361 Number of extensions: 1381811 Number of successful extensions: 5344 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 5101 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5336 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 5216272880 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)