>QORL_ARATH (Q9ZUC1) Quinone oxidoreductase-like protein At1g23740, chloroplast|
           precursor (EC 1.-.-.-)
          Length = 386

 Score =  203 bits (516), Expect = 3e-52
 Identities = 101/144 (70%), Positives = 114/144 (79%)
 Frame = -1

Query: 548 VIQLAKQVYGASKVAATASTPKLELLKSLGADVAIDYTKDSFDDMPDKYDVVFDXXXXXX 369
           VIQLAK VYGASKVAATAST KLEL++SLGAD+AIDYTK++ +D+PDKYDVVFD      
Sbjct: 243 VIQLAKHVYGASKVAATASTEKLELVRSLGADLAIDYTKENIEDLPDKYDVVFDAIGMCD 302

Query: 368 XXXXXXXXXXXXXVLTGAVTPPGFRFVVTSDGSVLAKLNPYLESGKVKPVVDPKGPFPFS 189
                         LTGAVTPPGFRFVVTS+G VL KLNPY+ESGKVKPVVDPKGPFPFS
Sbjct: 303 KAVKVIKEGGKVVALTGAVTPPGFRFVVTSNGDVLKKLNPYIESGKVKPVVDPKGPFPFS 362

Query: 188 QVVEAFSYLETGRAAGKVVISPVP 117
           +V +AFSYLET  A GKVV+ P+P
Sbjct: 363 RVADAFSYLETNHATGKVVVYPIP 386

>QOR_LEIAM (P42865) Probable quinone oxidoreductase (EC 1.6.5.5)|
           (NADPH:quinone reductase) (P36)
          Length = 340

 Score = 49.7 bits (117), Expect = 5e-06
 Identities = 47/178 (26%), Positives = 66/178 (37%), Gaps = 39/178 (21%)
 Frame = -1

Query: 545 IQLAKQVYGASKVAATASTPKLELLKSLGADVAIDYTKDSFDD-----MPDKYDVVF--- 390
           +QL K VYG + +   +S  K E LKS+G D  I+Y  +S D       P   DVV+   
Sbjct: 163 VQLLKHVYGCTVIGTCSSEEKAEFLKSIGCDHVINYKTESLDGRLHELCPKGVDVVYECV 222

Query: 389 ------DXXXXXXXXXXXXXXXXXXXVLTGAVTP-------------------------P 303
                 D                     +G V P                         P
Sbjct: 223 GGHTFNDAVRHVAVHARVVIIGSISSYKSGEVVPFSDPSGTSVTMLLLVKSASLNGFFLP 282

Query: 302 GFRFVVTSDGSVLAKLNPYLESGKVKPVVDPKGPFPFSQVVEAFSYLETGRAAGKVVI 129
            F  V+      +A L  YL++G+VK  VD K     S V +A  +L +G   GKV++
Sbjct: 283 QFHDVIP---KYMANLLQYLKAGQVKLFVDKKVFHGLSSVADAVDHLYSGANYGKVLV 337

>RT4I1_BRARE (Q7T3C7) Reticulon-4-interacting protein 1 homolog, mitochondrial|
           precursor
          Length = 387

 Score = 44.3 bits (103), Expect = 2e-04
 Identities = 23/50 (46%), Positives = 34/50 (68%)
 Frame = -1

Query: 275 GSVLAKLNPYLESGKVKPVVDPKGPFPFSQVVEAFSYLETGRAAGKVVIS 126
           GS L +++  +++GKV+PVV+    F F+QV EAF  +E G A GK V+S
Sbjct: 333 GSALDEVSEMVDAGKVRPVVEEV--FSFAQVPEAFQKVEQGHARGKTVVS 380

>RT4I1_MOUSE (Q924D0) Reticulon-4-interacting protein 1, mitochondrial precursor|
           (NOGO-interacting mitochondrial protein)
          Length = 396

 Score = 42.7 bits (99), Expect = 7e-04
 Identities = 49/180 (27%), Positives = 72/180 (40%), Gaps = 38/180 (21%)
 Frame = -1

Query: 545 IQLAKQVYGASKVAATASTPKLELLKSLGADVAIDYTKDSFDDMPDKYDVVFDXXXXXXX 366
           IQ+ K  +GA  V A  S    EL++ LGAD  IDYT  S ++   K   +FD       
Sbjct: 222 IQVMK-AWGAH-VTAVCSKDASELVRKLGADEVIDYTLGSVEEQL-KSLKLFDFILDNVG 278

Query: 365 XXXXXXXXXXXXVLTGA-----VTP------------------------------PGFRF 291
                         +GA     VTP                               G  +
Sbjct: 279 GSTETWALNFLKKWSGATYVTLVTPFLLNMDRLGVADGMLQTGVTVGTKALKHLWQGVHY 338

Query: 290 ---VVTSDGSVLAKLNPYLESGKVKPVVDPKGPFPFSQVVEAFSYLETGRAAGKVVISPV 120
                 + G  L ++   +++GK++PV++    FPFS+V EAF  +E G A GK V++ V
Sbjct: 339 RWAFFMASGPYLDEIAELVDAGKIRPVIE--RTFPFSEVPEAFLKVERGHARGKTVVNVV 396

>RT4I1_HUMAN (Q8WWV3) Reticulon-4-interacting protein 1, mitochondrial precursor|
           (NOGO-interacting mitochondrial protein)
          Length = 396

 Score = 42.4 bits (98), Expect = 9e-04
 Identities = 22/54 (40%), Positives = 34/54 (62%)
 Frame = -1

Query: 281 SDGSVLAKLNPYLESGKVKPVVDPKGPFPFSQVVEAFSYLETGRAAGKVVISPV 120
           + G  L  +   +++GK++PV++    FPFS+V EAF  +E G A GK VI+ V
Sbjct: 345 ASGPCLDDIAELVDAGKIRPVIEQT--FPFSKVPEAFLKVERGHARGKTVINVV 396

>YNN4_YEAST (P53912) Hypothetical 41.2 kDa protein in FPR1-TOM22 intergenic|
           region
          Length = 376

 Score = 36.6 bits (83), Expect = 0.048
 Identities = 21/51 (41%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
 Frame = -1

Query: 548 VIQLAKQVYGASKVAATASTPKLELLKSLGADVAIDY-TKDSFDDMPDKYD 399
           +IQLAK++ G SK+   AS    +LLK  GAD   DY   D  + +  KY+
Sbjct: 191 LIQLAKKLNGFSKIIVVASRKHEKLLKEYGADELFDYHDADVIEQIKKKYN 241

>QORH_ARATH (Q9SV68) Putative chloroplastic quinone-oxidoreductase homolog (EC|
           1.-.-.-)
          Length = 329

 Score = 35.4 bits (80), Expect = 0.11
 Identities = 43/163 (26%), Positives = 63/163 (38%), Gaps = 22/163 (13%)
 Frame = -1

Query: 545 IQLAKQVYGASKVAATASTPKLELLKSLGADVAIDYTKDSFDDMPD----KYDVVFDXXX 378
           +QLAK     + V AT     +E +KSLGAD  +DY       +      KYD V     
Sbjct: 173 VQLAK--LANAHVTATCGARNIEFVKSLGADEVLDYKTPEGAALKSPSGKKYDAVVHCAN 230

Query: 377 XXXXXXXXXXXXXXXXVLTGAVTP-PGFRFVVTSDGSVLAK--LNPYL------------ 243
                           V+   +TP P   +        ++K  L P L            
Sbjct: 231 GIPFSVFEPNLSENGKVID--ITPGPNAMWTYAVKKITMSKKQLVPLLLIPKAENLEFMV 288

Query: 242 ---ESGKVKPVVDPKGPFPFSQVVEAFSYLETGRAAGKVVISP 123
              + GKVK V+D K   P S+  +A++    G A GK+++ P
Sbjct: 289 NLVKEGKVKTVIDSK--HPLSKAEDAWAKSIDGHATGKIIVEP 329

>QORH_SPIOL (Q8H0M1) Chloroplastic quinone-oxidoreductase homolog (EC 1.-.-.-)|
           (ceQORH)
          Length = 329

 Score = 34.7 bits (78), Expect = 0.18
 Identities = 41/161 (25%), Positives = 61/161 (37%), Gaps = 20/161 (12%)
 Frame = -1

Query: 545 IQLAKQVYGASKVAATASTPKLELLKSLGADVAIDYTKDSFDDMPD----KYDVVFDXXX 378
           +QLAK   G + V AT     L+ +K LGAD  +DY       +      KYD V     
Sbjct: 173 VQLAK--LGNTHVTATCGARNLDFVKGLGADEVLDYKTPEGASLTSPSGKKYDYVVHGAS 230

Query: 377 XXXXXXXXXXXXXXXXVL------TGAVTPPGFRFVVTSDGSVLAKLNP----------Y 246
                           V+      T  +T    +   +    V   L P           
Sbjct: 231 GIPWSTFEPNLSEAGKVIDLTPGPTAMMTFAWKKLTFSKKQLVPLLLIPKIPNFEYVVNL 290

Query: 245 LESGKVKPVVDPKGPFPFSQVVEAFSYLETGRAAGKVVISP 123
           ++  K+K V+D K   P S+  +A+S +  G A GK++I P
Sbjct: 291 VKEKKLKTVIDSK--HPLSKGEDAWSRIMGGHATGKIIIEP 329

>YCZ2_YEAST (P25608) 40.1 kDa protein in GIT1-PAU3 intergenic region|
          Length = 368

 Score = 32.7 bits (73), Expect = 0.69
 Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
 Frame = -1

Query: 548 VIQLAKQVYGASKVAATASTPKLELLKSLGADVAIDYTK-DSFDDMPDKYD 399
           +IQLA ++ G +K+   AS    +LLK  GAD   DY   D  + +  KY+
Sbjct: 183 LIQLANKLNGFTKIIVVASRKHEKLLKEYGADQLFDYHDIDVVEQIKHKYN 233

>YL460_YEAST (P54007) Hypothetical 41.1 kDa protein ON CDC91-PAU4 intergenic|
           region
          Length = 376

 Score = 32.7 bits (73), Expect = 0.69
 Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
 Frame = -1

Query: 548 VIQLAKQVYGASKVAATASTPKLELLKSLGADVAIDYTK-DSFDDMPDKYD 399
           +IQLA ++ G +K+   AS    +LLK  GAD   DY   D  + +  KY+
Sbjct: 191 LIQLANKLNGFTKIIVVASRKHEKLLKEYGADELFDYHDIDVVEQIKHKYN 241

>CND2_MOUSE (Q8C156) Condensin complex subunit 2 (Barren homolog protein 1)|
           (Chromosome-associated protein H) (mCAP-H) (XCAP-H
           homolog)
          Length = 731

 Score = 32.3 bits (72), Expect = 0.90
 Identities = 25/85 (29%), Positives = 36/85 (42%)
 Frame = -1

Query: 320 GAVTPPGFRFVVTSDGSVLAKLNPYLESGKVKPVVDPKGPFPFSQVVEAFSYLETGRAAG 141
           G  TPP      + DGS L       E+ + K    PK       + +  S +    A G
Sbjct: 179 GKDTPPQGEESHSGDGSTL-------ETERTKKPAKPKKKQSCKTIEQNLSNINVSEADG 231

Query: 140 KVVISPVP*DTAVNS*QPSTSGVFL 66
           K  + P+   TA +  + ST+GVFL
Sbjct: 232 KCAVDPMFQKTAASFDECSTTGVFL 256

>VAT1_HUMAN (Q99536) Synaptic vesicle membrane protein VAT-1 homolog (EC|
           1.-.-.-)
          Length = 393

 Score = 32.3 bits (72), Expect = 0.90
 Identities = 16/51 (31%), Positives = 28/51 (54%)
 Frame = -1

Query: 269 VLAKLNPYLESGKVKPVVDPKGPFPFSQVVEAFSYLETGRAAGKVVISPVP 117
           V+A+L      G +KP +D    +PF +V +A   ++  +  GKV++ P P
Sbjct: 341 VVARLLALYNQGHIKPHID--SVWPFEKVADAMKQMQEKKNVGKVLLVPGP 389

>TOXD_COCCA (P54006) Protein TOXD|
          Length = 297

 Score = 32.3 bits (72), Expect = 0.90
 Identities = 23/58 (39%), Positives = 30/58 (51%), Gaps = 5/58 (8%)
 Frame = -1

Query: 545 IQLAKQVYGASKVAATASTPKLELLKSLGADVAIDYTKDSFDD-----MPDKYDVVFD 387
           IQLAK      +V  T S    EL+KSLGAD+  DY + +  D       +K  +VFD
Sbjct: 170 IQLAK--LSGYRVITTCSPHHFELMKSLGADLVFDYHEITSADHIRRCTQNKLKLVFD 225

>VAT1_MOUSE (Q62465) Synaptic vesicle membrane protein VAT-1 homolog (EC|
           1.-.-.-)
          Length = 406

 Score = 32.0 bits (71), Expect = 1.2
 Identities = 16/52 (30%), Positives = 28/52 (53%)
 Frame = -1

Query: 272 SVLAKLNPYLESGKVKPVVDPKGPFPFSQVVEAFSYLETGRAAGKVVISPVP 117
           SV+ +L      G +KP +D    +PF +V +A   ++  +  GKV++ P P
Sbjct: 353 SVVTRLVALYNQGHIKPRID--SVWPFEKVADAMKQMQEKKNIGKVLLVPGP 402

>AST1_YEAST (P35183) Protein AST1|
          Length = 429

 Score = 32.0 bits (71), Expect = 1.2
 Identities = 17/41 (41%), Positives = 27/41 (65%)
 Frame = -1

Query: 248 YLESGKVKPVVDPKGPFPFSQVVEAFSYLETGRAAGKVVIS 126
           +L++G VK VVD    + +    EAFSY+ T RA GK++++
Sbjct: 387 FLKNGTVKCVVDKV--YDWKDHKEAFSYMATQRAQGKLIMN 425

>PBUX_BACSU (P42086) Xanthine permease|
          Length = 438

 Score = 32.0 bits (71), Expect = 1.2
 Identities = 17/35 (48%), Positives = 22/35 (62%)
 Frame = +1

Query: 10  IFFCFVCTIQQIFCSVIRGKNTPLVLGC*LFTAVS 114
           IF C V T+ Q++ +   G   P+VLGC  FTAVS
Sbjct: 49  IFMCGVATLLQVWSNRFFGIGLPVVLGC-TFTAVS 82

>LIPB1_HUMAN (Q86W92) Liprin-beta-1 (Protein tyrosine phosphatase receptor type|
           f polypeptide-interacting protein-binding protein 1)
           (PTPRF-interacting protein-binding protein 1) (hSGT2)
          Length = 1011

 Score = 32.0 bits (71), Expect = 1.2
 Identities = 19/65 (29%), Positives = 30/65 (46%)
 Frame = +3

Query: 63  WQKHTTCAWLLAIYSGVSWNRRNDHFAGGSSCLEVGKRLHDLGEGERPLGVDHRLHLPGL 242
           W K   C WL+    G   N      A G + L+  ++  DL   E+ LG+ H LH   L
Sbjct: 647 WTKEQVCNWLMEQGLGSYLNSGKHWIASGQTLLQASQQ--DL---EKELGIKHSLHRKKL 701

Query: 243 EVRVE 257
           ++ ++
Sbjct: 702 QLALQ 706

>FAS_BOVIN (Q71SP7) Fatty acid synthase (EC 2.3.1.85) [Includes:|
            [Acyl-carrier-protein] S-acetyltransferase (EC 2.3.1.38);
            [Acyl-carrier-protein] S-malonyltransferase (EC
            2.3.1.39); 3-oxoacyl-[acyl-carrier-protein] synthase (EC
            2.3.1.41); 3-oxoacyl-[acyl-
          Length = 2513

 Score = 31.6 bits (70), Expect = 1.5
 Identities = 18/46 (39%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
 Frame = -1

Query: 260  KLNPYLESGKVKPVVDP--KGPFPFSQVVEAFSYLETGRAAGKVVI 129
            +++  L++G  K VV P  +  FP +Q  +AF Y+  G+  GKVVI
Sbjct: 1811 EVSTLLKAGIRKGVVQPLKRTVFPRTQAEDAFRYMAQGKHIGKVVI 1856

>YMN1_YEAST (Q03102) Hypothetical 40.0 kDa protein in COX14-COS3 intergenic|
           region
          Length = 365

 Score = 30.4 bits (67), Expect = 3.4
 Identities = 20/43 (46%), Positives = 26/43 (60%), Gaps = 2/43 (4%)
 Frame = -1

Query: 545 IQLAKQVYGASKVAATASTP-KLELLKSLGAD-VAIDYTKDSF 423
           IQLA  V+ ASKV A A  P K+  ++S G + V +DY   SF
Sbjct: 183 IQLALNVFKASKVIAIAGGPEKVAFVESFGDNVVGVDYKDPSF 225

>WSC3_YEAST (Q12215) Cell wall integrity and stress response component 3|
           precursor
          Length = 556

 Score = 30.4 bits (67), Expect = 3.4
 Identities = 29/113 (25%), Positives = 43/113 (38%), Gaps = 2/113 (1%)
 Frame = +1

Query: 178 STTWEKGKGPLGSTTGFTFPDSR*GLSFARTDPSEVTTNRNPGGVTAPVRXXXXXXXXXX 357
           STT       + STT  T  D +     A T  +  TT+ +    T+             
Sbjct: 155 STTSSLSSAQISSTTRRTSTDMKSSEMIATTVSTTSTTSSSTSSTTSSTTSSTTSSTTSS 214

Query: 358 XXAFSPWPTASNTTSYL--SGMSSKLSLV*SMATSAPRLFRSSSFGVLAVAAT 510
             + S   T S+TTS    S  SS  S   S  TS+     +S F V + +++
Sbjct: 215 TTSSSTSSTTSSTTSSTTSSTTSSTTSSTTSSTTSSTTSSTTSIFSVTSSSSS 267

>FAS_MOUSE (P19096) Fatty acid synthase (EC 2.3.1.85) [Includes:|
            [Acyl-carrier-protein] S-acetyltransferase (EC 2.3.1.38);
            [Acyl-carrier-protein] S-malonyltransferase (EC
            2.3.1.39); 3-oxoacyl-[acyl-carrier-protein] synthase (EC
            2.3.1.41); 3-oxoacyl-[acyl-
          Length = 2504

 Score = 30.4 bits (67), Expect = 3.4
 Identities = 18/47 (38%), Positives = 26/47 (55%)
 Frame = -1

Query: 269  VLAKLNPYLESGKVKPVVDPKGPFPFSQVVEAFSYLETGRAAGKVVI 129
            V A L   +  G VKP+      FP +QV +AF Y+  G+  GKV++
Sbjct: 1803 VAALLKAGIRDGVVKPLKCTV--FPKAQVEDAFRYMAQGKHIGKVLV 1847

>SAMD6_HUMAN (Q68DC2) Sterile alpha motif domain-containing protein 6 (Ankyrin|
           repeat domain-containing protein 14)
          Length = 871

 Score = 29.6 bits (65), Expect = 5.9
 Identities = 15/32 (46%), Positives = 17/32 (53%)
 Frame = -3

Query: 279 RRVRPGEAQPLPRVREGEAGGRPQGAFPLLPG 184
           R + PG A+P  R  E EAG  P GA    PG
Sbjct: 27  RLLEPGAAEPAERGAEPEAGAEPAGAEVAGPG 58

>DHSO_MACFA (Q4R639) Sorbitol dehydrogenase (EC 1.1.1.14) (L-iditol|
           2-dehydrogenase)
          Length = 356

 Score = 29.6 bits (65), Expect = 5.9
 Identities = 14/47 (29%), Positives = 25/47 (53%)
 Frame = -1

Query: 539 LAKQVYGASKVAATASTPKLELLKSLGADVAIDYTKDSFDDMPDKYD 399
           +AK +  A  V    S P+L   K +GAD+ +  +K+S  ++  K +
Sbjct: 190 VAKAMGAAQVVVTDLSAPRLSKAKEIGADLVLQISKESPQEIAGKVE 236

>ADH1_CANAL (P43067) Alcohol dehydrogenase 1 (EC 1.1.1.1) (40 kDa allergen)|
           (Allergen Cand a 1) (Can a 1) (Can a I)
          Length = 350

 Score = 29.6 bits (65), Expect = 5.9
 Identities = 16/39 (41%), Positives = 23/39 (58%)
 Frame = -1

Query: 545 IQLAKQVYGASKVAATASTPKLELLKSLGADVAIDYTKD 429
           +Q A+ + G   VA      K E +KSLGA+  +D+TKD
Sbjct: 190 VQYARAM-GLRVVAIDGGDEKGEFVKSLGAEAYVDFTKD 227

>TAGF_BACSU (P13485) CDP-glycerol:poly(glycerophosphate)|
           glycerophosphotransferase (EC 2.7.8.12) (Polyglycerol
           phosphate polymerase) (CGPTase) (Major teichoic acid
           biosynthesis protein F)
          Length = 746

 Score = 29.3 bits (64), Expect = 7.7
 Identities = 18/56 (32%), Positives = 27/56 (48%)
 Frame = -1

Query: 299 FRFVVTSDGSVLAKLNPYLESGKVKPVVDPKGPFPFSQVVEAFSYLETGRAAGKVV 132
           F F   + G ++      +E+ K     D K P  F    + F YLE+GR++ KVV
Sbjct: 684 FDFEKEAPGPLVKTTEETIEAIKQISSPDYKLPVSFGPFYDKFCYLESGRSSEKVV 739

>ASPM_MOUSE (Q8CJ27) Abnormal spindle-like microcephaly-associated protein|
            homolog (Calmodulin-binding protein 1) (Spindle and
            hydroxyurea checkpoint abnormal protein)
            (Calmodulin-binding protein Sha1)
          Length = 3122

 Score = 28.9 bits (63), Expect = 10.0
 Identities = 13/31 (41%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
 Frame = +3

Query: 48   LLSNPWQKHTTCAWLL-AIYSGVSWNRRNDH 137
            LL    +K T+CA  + A++ G SW ++NDH
Sbjct: 2841 LLCRRQEKITSCATRIQALWRGYSWRKKNDH 2871


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 75,250,118
Number of Sequences: 219361
Number of extensions: 1574453
Number of successful extensions: 5909
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 5605
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5894
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4430660157
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)