ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbah61k24
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1HSP7S_PEA (Q02028) Stromal 70 kDa heat shock-related protein, ch... 33 0.20
2DNAK2_PROMM (Q7V3T5) Chaperone protein dnaK2 (Heat shock protein... 28 4.9
3DNAK2_SYNP7 (P50021) Chaperone protein dnaK2 (Heat shock protein... 28 6.4
4DNAK2_SYNP6 (Q5N1J4) Chaperone protein dnaK 2 (Heat shock protei... 28 6.4

>HSP7S_PEA (Q02028) Stromal 70 kDa heat shock-related protein, chloroplast|
           precursor
          Length = 706

 Score = 33.1 bits (74), Expect = 0.20
 Identities = 19/31 (61%), Positives = 20/31 (64%), Gaps = 4/31 (12%)
 Frame = -2

Query: 170 PTP----SAGSTSSGKGPNDXDVIDADFTDS 90
           PTP    S  S SSGK   + DVIDADFTDS
Sbjct: 675 PTPPGSESGPSESSGKEGPEGDVIDADFTDS 705



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>DNAK2_PROMM (Q7V3T5) Chaperone protein dnaK2 (Heat shock protein 70-2) (Heat|
           shock 70 kDa protein 2) (HSP70-2)
          Length = 634

 Score = 28.5 bits (62), Expect = 4.9
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = -2

Query: 182 AEXEPTPSAGSTSSGKGPNDXDVIDADFTDS 90
           A  E    AG+  +G   +  DVIDA+FT+S
Sbjct: 603 AAAESGADAGAAGAGDSSSGDDVIDAEFTES 633



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>DNAK2_SYNP7 (P50021) Chaperone protein dnaK2 (Heat shock protein 70-2) (Heat|
           shock 70 kDa protein 2) (HSP70-2)
          Length = 634

 Score = 28.1 bits (61), Expect = 6.4
 Identities = 15/32 (46%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
 Frame = -2

Query: 182 AEXEPTPSAG-STSSGKGPNDXDVIDADFTDS 90
           AE      AG S+SS     D DVIDA+F++S
Sbjct: 602 AEASANAQAGPSSSSSSSSGDDDVIDAEFSES 633



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>DNAK2_SYNP6 (Q5N1J4) Chaperone protein dnaK 2 (Heat shock protein 70 2) (Heat|
           shock 70 kDa protein 2) (HSP70 2)
          Length = 634

 Score = 28.1 bits (61), Expect = 6.4
 Identities = 15/32 (46%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
 Frame = -2

Query: 182 AEXEPTPSAG-STSSGKGPNDXDVIDADFTDS 90
           AE      AG S+SS     D DVIDA+F++S
Sbjct: 602 AEASANAQAGPSSSSSSSSGDDDVIDAEFSES 633


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 25,539,096
Number of Sequences: 219361
Number of extensions: 353486
Number of successful extensions: 855
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 853
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 855
length of database: 80,573,946
effective HSP length: 50
effective length of database: 69,605,896
effective search space used: 1670541504
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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