ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbah61k23 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY107375.1| Zea mays PCO097021 mRNA sequence Length = 711 Score = 85.7 bits (43), Expect = 4e-14 Identities = 61/67 (91%) Strand = Plus / Minus Query: 121 gaaccggaactcactgccgaatccacgggactgctgcagagtctgggcaaaggcctggta 180 |||||||||||| ||||| || |||||||||||||| || |||||||| ||||||||||| Sbjct: 374 gaaccggaactcgctgccaaacccacgggactgctggagtgtctgggcgaaggcctggta 315 Query: 181 cttgcgg 187 ||||||| Sbjct: 314 cttgcgg 308 Score = 38.2 bits (19), Expect = 9.2 Identities = 28/31 (90%) Strand = Plus / Minus Query: 24 tttagctatataagtcgtcatcttcagctgc 54 ||||||| |||||||||||||| || ||||| Sbjct: 453 tttagctgtataagtcgtcatcgtcggctgc 423
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 83.8 bits (42), Expect = 2e-13 Identities = 69/78 (88%) Strand = Plus / Plus Query: 110 ggctgatcagggaaccggaactcactgccgaatccacgggactgctgcagagtctgggca 169 ||||| |||| ||||| ||||| ||||||| ||||| |||||||||||||||||||| Sbjct: 2834414 ggctggtcagcgaacctaaactcggtgccgaacccacgagactgctgcagagtctgggcg 2834473 Query: 170 aaggcctggtacttgcgg 187 |||||||||||||||||| Sbjct: 2834474 aaggcctggtacttgcgg 2834491 Score = 42.1 bits (21), Expect = 0.59 Identities = 36/41 (87%) Strand = Plus / Plus Query: 29 ctatataagtcgtcatcttcagctgccgctgcagcggatgc 69 |||||||| || ||||| |||||||| || ||||||||||| Sbjct: 2834339 ctatataaatcatcatcgtcagctgcggcggcagcggatgc 2834379
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 83.8 bits (42), Expect = 2e-13 Identities = 69/78 (88%) Strand = Plus / Plus Query: 110 ggctgatcagggaaccggaactcactgccgaatccacgggactgctgcagagtctgggca 169 ||||| |||| ||||| ||||| ||||||| ||||| |||||||||||||||||||| Sbjct: 2834525 ggctggtcagcgaacctaaactcggtgccgaacccacgagactgctgcagagtctgggcg 2834584 Query: 170 aaggcctggtacttgcgg 187 |||||||||||||||||| Sbjct: 2834585 aaggcctggtacttgcgg 2834602 Score = 42.1 bits (21), Expect = 0.59 Identities = 36/41 (87%) Strand = Plus / Plus Query: 29 ctatataagtcgtcatcttcagctgccgctgcagcggatgc 69 |||||||| || ||||| |||||||| || ||||||||||| Sbjct: 2834450 ctatataaatcatcatcgtcagctgcggcggcagcggatgc 2834490
>gb|AC137635.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0038D20, from chromosome 3, complete sequence Length = 165395 Score = 83.8 bits (42), Expect = 2e-13 Identities = 69/78 (88%) Strand = Plus / Plus Query: 110 ggctgatcagggaaccggaactcactgccgaatccacgggactgctgcagagtctgggca 169 ||||| |||| ||||| ||||| ||||||| ||||| |||||||||||||||||||| Sbjct: 106370 ggctggtcagcgaacctaaactcggtgccgaacccacgagactgctgcagagtctgggcg 106429 Query: 170 aaggcctggtacttgcgg 187 |||||||||||||||||| Sbjct: 106430 aaggcctggtacttgcgg 106447 Score = 42.1 bits (21), Expect = 0.59 Identities = 36/41 (87%) Strand = Plus / Plus Query: 29 ctatataagtcgtcatcttcagctgccgctgcagcggatgc 69 |||||||| || ||||| |||||||| || ||||||||||| Sbjct: 106295 ctatataaatcatcatcgtcagctgcggcggcagcggatgc 106335
>dbj|AK121641.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033055F21, full insert sequence Length = 2914 Score = 83.8 bits (42), Expect = 2e-13 Identities = 69/78 (88%) Strand = Plus / Minus Query: 110 ggctgatcagggaaccggaactcactgccgaatccacgggactgctgcagagtctgggca 169 ||||| |||| ||||| ||||| ||||||| ||||| |||||||||||||||||||| Sbjct: 2470 ggctggtcagtgaacctaaactcggtgccgaacccacgagactgctgcagagtctgggcg 2411 Query: 170 aaggcctggtacttgcgg 187 |||||||||||||||||| Sbjct: 2410 aaggcctggtacttgcgg 2393 Score = 42.1 bits (21), Expect = 0.59 Identities = 36/41 (87%) Strand = Plus / Minus Query: 29 ctatataagtcgtcatcttcagctgccgctgcagcggatgc 69 |||||||| || ||||| |||||||| || ||||||||||| Sbjct: 2545 ctatataaatcatcatcgtcagctgcggcggcagcggatgc 2505
>dbj|AK099712.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013082G14, full insert sequence Length = 2680 Score = 83.8 bits (42), Expect = 2e-13 Identities = 69/78 (88%) Strand = Plus / Minus Query: 110 ggctgatcagggaaccggaactcactgccgaatccacgggactgctgcagagtctgggca 169 ||||| |||| ||||| ||||| ||||||| ||||| |||||||||||||||||||| Sbjct: 2470 ggctggtcagcgaacctaaactcggtgccgaacccacgagactgctgcagagtctgggcg 2411 Query: 170 aaggcctggtacttgcgg 187 |||||||||||||||||| Sbjct: 2410 aaggcctggtacttgcgg 2393 Score = 42.1 bits (21), Expect = 0.59 Identities = 36/41 (87%) Strand = Plus / Minus Query: 29 ctatataagtcgtcatcttcagctgccgctgcagcggatgc 69 |||||||| || ||||| |||||||| || ||||||||||| Sbjct: 2545 ctatataaatcatcatcgtcagctgcggcggcagcggatgc 2505
>dbj|AK099889.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013112O07, full insert sequence Length = 2685 Score = 83.8 bits (42), Expect = 2e-13 Identities = 69/78 (88%) Strand = Plus / Minus Query: 110 ggctgatcagggaaccggaactcactgccgaatccacgggactgctgcagagtctgggca 169 ||||| |||| ||||| ||||| ||||||| ||||| |||||||||||||||||||| Sbjct: 2470 ggctggtcagcgaacctaaactcggtgccgaacccacgagactgctgcagagtctgggcg 2411 Query: 170 aaggcctggtacttgcgg 187 |||||||||||||||||| Sbjct: 2410 aaggcctggtacttgcgg 2393 Score = 42.1 bits (21), Expect = 0.59 Identities = 36/41 (87%) Strand = Plus / Minus Query: 29 ctatataagtcgtcatcttcagctgccgctgcagcggatgc 69 |||||||| || ||||| |||||||| || ||||||||||| Sbjct: 2545 ctatataaatcatcatcgtcagctgcggcggcagcggatgc 2505
>dbj|AK098980.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013093N05, full insert sequence Length = 2701 Score = 83.8 bits (42), Expect = 2e-13 Identities = 69/78 (88%) Strand = Plus / Minus Query: 110 ggctgatcagggaaccggaactcactgccgaatccacgggactgctgcagagtctgggca 169 ||||| |||| ||||| ||||| ||||||| ||||| |||||||||||||||||||| Sbjct: 2470 ggctggtcagcgaacctaaactcggtgccgaacccacgagactgctgcagagtctgggcg 2411 Query: 170 aaggcctggtacttgcgg 187 |||||||||||||||||| Sbjct: 2410 aaggcctggtacttgcgg 2393 Score = 42.1 bits (21), Expect = 0.59 Identities = 36/41 (87%) Strand = Plus / Minus Query: 29 ctatataagtcgtcatcttcagctgccgctgcagcggatgc 69 |||||||| || ||||| |||||||| || ||||||||||| Sbjct: 2545 ctatataaatcatcatcgtcagctgcggcggcagcggatgc 2505
>dbj|AK098874.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001D04, full insert sequence Length = 2685 Score = 83.8 bits (42), Expect = 2e-13 Identities = 69/78 (88%) Strand = Plus / Minus Query: 110 ggctgatcagggaaccggaactcactgccgaatccacgggactgctgcagagtctgggca 169 ||||| |||| ||||| ||||| ||||||| ||||| |||||||||||||||||||| Sbjct: 2470 ggctggtcagcgaacctaaactcggtgccgaacccacgagactgctgcagagtctgggcg 2411 Query: 170 aaggcctggtacttgcgg 187 |||||||||||||||||| Sbjct: 2410 aaggcctggtacttgcgg 2393 Score = 42.1 bits (21), Expect = 0.59 Identities = 36/41 (87%) Strand = Plus / Minus Query: 29 ctatataagtcgtcatcttcagctgccgctgcagcggatgc 69 |||||||| || ||||| |||||||| || ||||||||||| Sbjct: 2545 ctatataaatcatcatcgtcagctgcggcggcagcggatgc 2505
>dbj|AK064955.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001A05, full insert sequence Length = 2685 Score = 83.8 bits (42), Expect = 2e-13 Identities = 69/78 (88%) Strand = Plus / Minus Query: 110 ggctgatcagggaaccggaactcactgccgaatccacgggactgctgcagagtctgggca 169 ||||| |||| ||||| ||||| ||||||| ||||| |||||||||||||||||||| Sbjct: 2470 ggctggtcagcgaacctaaactcggtgccgaacccacgagactgctgcagagtctgggcg 2411 Query: 170 aaggcctggtacttgcgg 187 |||||||||||||||||| Sbjct: 2410 aaggcctggtacttgcgg 2393 Score = 42.1 bits (21), Expect = 0.59 Identities = 36/41 (87%) Strand = Plus / Minus Query: 29 ctatataagtcgtcatcttcagctgccgctgcagcggatgc 69 |||||||| || ||||| |||||||| || ||||||||||| Sbjct: 2545 ctatataaatcatcatcgtcagctgcggcggcagcggatgc 2505
>dbj|AK059991.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-B06, full insert sequence Length = 1232 Score = 83.8 bits (42), Expect = 2e-13 Identities = 69/78 (88%) Strand = Plus / Minus Query: 110 ggctgatcagggaaccggaactcactgccgaatccacgggactgctgcagagtctgggca 169 ||||| |||| ||||| ||||| ||||||| ||||| |||||||||||||||||||| Sbjct: 1022 ggctggtcagcgaacctaaactcggtgccgaacccacgagactgctgcagagtctgggcg 963 Query: 170 aaggcctggtacttgcgg 187 |||||||||||||||||| Sbjct: 962 aaggcctggtacttgcgg 945 Score = 42.1 bits (21), Expect = 0.59 Identities = 36/41 (87%) Strand = Plus / Minus Query: 29 ctatataagtcgtcatcttcagctgccgctgcagcggatgc 69 |||||||| || ||||| |||||||| || ||||||||||| Sbjct: 1097 ctatataaatcatcatcgtcagctgcggcggcagcggatgc 1057
>gb|BT017848.1| Zea mays clone EL01N0510F05.c mRNA sequence Length = 646 Score = 81.8 bits (41), Expect = 7e-13 Identities = 62/69 (89%) Strand = Plus / Minus Query: 119 gggaaccggaactcactgccgaatccacgggactgctgcagagtctgggcaaaggcctgg 178 |||||||||||||| ||||| || || ||||||||||| || |||||||| ||||||||| Sbjct: 394 gggaaccggaactcgctgccaaacccgcgggactgctggagtgtctgggcgaaggcctgg 335 Query: 179 tacttgcgg 187 ||||||||| Sbjct: 334 tacttgcgg 326 Score = 58.0 bits (29), Expect = 1e-05 Identities = 50/57 (87%) Strand = Plus / Minus Query: 23 atttagctatataagtcgtcatcttcagctgccgctgcagcggatgcaaaaggatcg 79 ||||| || |||||||| ||||| |||||||| |||||||||||||| || |||||| Sbjct: 481 atttaactgtataagtcatcatcgtcagctgctgctgcagcggatgcgaagggatcg 425
>gb|AY108324.1| Zea mays PCO097023 mRNA sequence Length = 1794 Score = 81.8 bits (41), Expect = 7e-13 Identities = 62/69 (89%) Strand = Plus / Minus Query: 119 gggaaccggaactcactgccgaatccacgggactgctgcagagtctgggcaaaggcctgg 178 |||||||||||||| ||||| || || ||||||||||| || |||||||| ||||||||| Sbjct: 1450 gggaaccggaactcgctgccaaacccgcgggactgctggagtgtctgggcgaaggcctgg 1391 Query: 179 tacttgcgg 187 ||||||||| Sbjct: 1390 tacttgcgg 1382 Score = 65.9 bits (33), Expect = 4e-08 Identities = 57/65 (87%) Strand = Plus / Minus Query: 23 atttagctatataagtcgtcatcttcagctgccgctgcagcggatgcaaaaggatcggca 82 ||||| || |||||||| ||||| |||||||| |||||||||||||| || |||||||| Sbjct: 1537 atttaactgtataagtcatcatcgtcagctgctgctgcagcggatgcgaagggatcggcc 1478 Query: 83 gcagc 87 ||||| Sbjct: 1477 gcagc 1473
>gb|AY105040.1| Zea mays PCO097024 mRNA sequence Length = 2126 Score = 77.8 bits (39), Expect = 1e-11 Identities = 57/63 (90%) Strand = Plus / Minus Query: 125 cggaactcactgccgaatccacgggactgctgcagagtctgggcaaaggcctggtacttg 184 |||||||| |||||||| |||||||||||||||| |||||||| || |||||||||||| Sbjct: 1832 cggaactcgctgccgaacccacgggactgctgcaacgtctgggcgaacgcctggtacttg 1773 Query: 185 cgg 187 ||| Sbjct: 1772 cgg 1770
>gb|AY456394.1| 'Chlorella' ellipsoidea cell division cycle protein 48 mRNA, partial cds Length = 2033 Score = 65.9 bits (33), Expect = 4e-08 Identities = 36/37 (97%) Strand = Plus / Minus Query: 151 ctgctgcagagtctgggcaaaggcctggtacttgcgg 187 ||||||||| ||||||||||||||||||||||||||| Sbjct: 1709 ctgctgcagcgtctgggcaaaggcctggtacttgcgg 1673
>ref|NM_196705.1| Oryza sativa (japonica cultivar-group) putative endoplasmic reticulum membrane fusion protein (OSJNBa0046P18.14), mRNA Length = 2454 Score = 61.9 bits (31), Expect = 6e-07 Identities = 55/63 (87%) Strand = Plus / Minus Query: 125 cggaactcactgccgaatccacgggactgctgcagagtctgggcaaaggcctggtacttg 184 |||||||||||||| || || || |||||||||| |||||||| || |||||||||||| Sbjct: 2363 cggaactcactgccaaacccgcgagactgctgcaacgtctgggcgaacgcctggtacttg 2304 Query: 185 cgg 187 ||| Sbjct: 2303 cgg 2301 Score = 38.2 bits (19), Expect = 9.2 Identities = 49/59 (83%) Strand = Plus / Minus Query: 29 ctatataagtcgtcatcttcagctgccgctgcagcggatgcaaaaggatcggcagcagc 87 |||||||| |||||||| ||||| | || ||||| || ||||||||||| || ||||| Sbjct: 2450 ctatataaatcgtcatcatcagcgacggcggcagcagacgcaaaaggatcagccgcagc 2392
>ref|NM_165726.1| Drosophila melanogaster TER94 CG2331-RB, transcript variant B (TER94), mRNA Length = 1458 Score = 61.9 bits (31), Expect = 6e-07 Identities = 34/35 (97%) Strand = Plus / Minus Query: 137 ccgaatccacgggactgctgcagagtctgggcaaa 171 |||||||||||||||||||||| |||||||||||| Sbjct: 862 ccgaatccacgggactgctgcaaagtctgggcaaa 828
>ref|NM_058021.3| Drosophila melanogaster TER94 CG2331-RA, transcript variant A (TER94), mRNA Length = 3018 Score = 61.9 bits (31), Expect = 6e-07 Identities = 34/35 (97%) Strand = Plus / Minus Query: 137 ccgaatccacgggactgctgcagagtctgggcaaa 171 |||||||||||||||||||||| |||||||||||| Sbjct: 2426 ccgaatccacgggactgctgcaaagtctgggcaaa 2392
>gb|AC007414.6| Drosophila melanogaster, chromosome 2R, region 46C-46D, BAC clone BACR06J01, complete sequence Length = 172904 Score = 61.9 bits (31), Expect = 6e-07 Identities = 34/35 (97%) Strand = Plus / Minus Query: 137 ccgaatccacgggactgctgcagagtctgggcaaa 171 |||||||||||||||||||||| |||||||||||| Sbjct: 47748 ccgaatccacgggactgctgcaaagtctgggcaaa 47714
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 61.9 bits (31), Expect = 6e-07 Identities = 55/63 (87%) Strand = Plus / Minus Query: 125 cggaactcactgccgaatccacgggactgctgcagagtctgggcaaaggcctggtacttg 184 |||||||||||||| || || || |||||||||| |||||||| || |||||||||||| Sbjct: 15401401 cggaactcactgccaaacccgcgagactgctgcaacgtctgggcgaacgcctggtacttg 15401342 Query: 185 cgg 187 ||| Sbjct: 15401341 cgg 15401339 Score = 42.1 bits (21), Expect = 0.59 Identities = 21/21 (100%) Strand = Plus / Plus Query: 78 cggcagcagcggcggaggcgg 98 ||||||||||||||||||||| Sbjct: 21267165 cggcagcagcggcggaggcgg 21267185 Score = 38.2 bits (19), Expect = 9.2 Identities = 49/59 (83%) Strand = Plus / Minus Query: 29 ctatataagtcgtcatcttcagctgccgctgcagcggatgcaaaaggatcggcagcagc 87 |||||||| |||||||| ||||| | || ||||| || ||||||||||| || ||||| Sbjct: 15401488 ctatataaatcgtcatcatcagcgacggcggcagcagacgcaaaaggatcagccgcagc 15401430
>gb|AC007413.5|AC007413 Drosophila melanogaster, chromosome 2R, region 46C-46D, BAC clone BACR01L01, complete sequence Length = 160301 Score = 61.9 bits (31), Expect = 6e-07 Identities = 34/35 (97%) Strand = Plus / Minus Query: 137 ccgaatccacgggactgctgcagagtctgggcaaa 171 |||||||||||||||||||||| |||||||||||| Sbjct: 159195 ccgaatccacgggactgctgcaaagtctgggcaaa 159161
>gb|AC087544.2|AC087544 Oryza sativa (japonica cultivar-group) chromosome 10 clone nbxb0046P18, complete sequence Length = 144720 Score = 61.9 bits (31), Expect = 6e-07 Identities = 55/63 (87%) Strand = Plus / Minus Query: 125 cggaactcactgccgaatccacgggactgctgcagagtctgggcaaaggcctggtacttg 184 |||||||||||||| || || || |||||||||| |||||||| || |||||||||||| Sbjct: 118764 cggaactcactgccaaacccgcgagactgctgcaacgtctgggcgaacgcctggtacttg 118705 Query: 185 cgg 187 ||| Sbjct: 118704 cgg 118702 Score = 38.2 bits (19), Expect = 9.2 Identities = 49/59 (83%) Strand = Plus / Minus Query: 29 ctatataagtcgtcatcttcagctgccgctgcagcggatgcaaaaggatcggcagcagc 87 |||||||| |||||||| ||||| | || ||||| || ||||||||||| || ||||| Sbjct: 118851 ctatataaatcgtcatcatcagcgacggcggcagcagacgcaaaaggatcagccgcagc 118793
>gb|AY190939.1| Drosophila erecta clone DERF01_42_I03 (D1420) genomic sequence Length = 45909 Score = 61.9 bits (31), Expect = 6e-07 Identities = 34/35 (97%) Strand = Plus / Minus Query: 137 ccgaatccacgggactgctgcagagtctgggcaaa 171 |||||||||||||||||||||| |||||||||||| Sbjct: 39169 ccgaatccacgggactgctgcaaagtctgggcaaa 39135
>dbj|AK058908.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-008-E02, full insert sequence Length = 872 Score = 61.9 bits (31), Expect = 6e-07 Identities = 55/63 (87%) Strand = Plus / Minus Query: 125 cggaactcactgccgaatccacgggactgctgcagagtctgggcaaaggcctggtacttg 184 |||||||||||||| || || || |||||||||| |||||||| || |||||||||||| Sbjct: 521 cggaactcactgccaaacccgcgagactgctgcaacgtctgggcgaacgcctggtacttg 462 Query: 185 cgg 187 ||| Sbjct: 461 cgg 459 Score = 38.2 bits (19), Expect = 9.2 Identities = 49/59 (83%) Strand = Plus / Minus Query: 29 ctatataagtcgtcatcttcagctgccgctgcagcggatgcaaaaggatcggcagcagc 87 |||||||| |||||||| ||||| | || ||||| || ||||||||||| || ||||| Sbjct: 608 ctatataaatcgtcatcatcagcgacggcggcagcagacgcaaaaggatcagccgcagc 550
>gb|AE003831.3| Drosophila melanogaster chromosome 2R, section 19 of 73 of the complete sequence Length = 275390 Score = 61.9 bits (31), Expect = 6e-07 Identities = 34/35 (97%) Strand = Plus / Minus Query: 137 ccgaatccacgggactgctgcagagtctgggcaaa 171 |||||||||||||||||||||| |||||||||||| Sbjct: 145041 ccgaatccacgggactgctgcaaagtctgggcaaa 145007
>gb|BT001521.1| Drosophila melanogaster LP12034 full insert cDNA Length = 1473 Score = 61.9 bits (31), Expect = 6e-07 Identities = 34/35 (97%) Strand = Plus / Minus Query: 137 ccgaatccacgggactgctgcagagtctgggcaaa 171 |||||||||||||||||||||| |||||||||||| Sbjct: 863 ccgaatccacgggactgctgcaaagtctgggcaaa 829
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 61.9 bits (31), Expect = 6e-07 Identities = 55/63 (87%) Strand = Plus / Minus Query: 125 cggaactcactgccgaatccacgggactgctgcagagtctgggcaaaggcctggtacttg 184 |||||||||||||| || || || |||||||||| |||||||| || |||||||||||| Sbjct: 15409642 cggaactcactgccaaacccgcgagactgctgcaacgtctgggcgaacgcctggtacttg 15409583 Query: 185 cgg 187 ||| Sbjct: 15409582 cgg 15409580 Score = 42.1 bits (21), Expect = 0.59 Identities = 21/21 (100%) Strand = Plus / Plus Query: 78 cggcagcagcggcggaggcgg 98 ||||||||||||||||||||| Sbjct: 21278429 cggcagcagcggcggaggcgg 21278449 Score = 38.2 bits (19), Expect = 9.2 Identities = 49/59 (83%) Strand = Plus / Minus Query: 29 ctatataagtcgtcatcttcagctgccgctgcagcggatgcaaaaggatcggcagcagc 87 |||||||| |||||||| ||||| | || ||||| || ||||||||||| || ||||| Sbjct: 15409729 ctatataaatcgtcatcatcagcgacggcggcagcagacgcaaaaggatcagccgcagc 15409671
>gb|AF047037.1|AF047037 Drosophila melanogaster transitional endoplasmic reticulum ATPase TER94 mRNA, complete cds Length = 2550 Score = 61.9 bits (31), Expect = 6e-07 Identities = 34/35 (97%) Strand = Plus / Minus Query: 137 ccgaatccacgggactgctgcagagtctgggcaaa 171 |||||||||||||||||||||| |||||||||||| Sbjct: 2367 ccgaatccacgggactgctgcaaagtctgggcaaa 2333
>gb|AF132553.1| Drosophila melanogaster BcDNA.GM02885 (BcDNA.GM02885) mRNA, complete cds Length = 3018 Score = 61.9 bits (31), Expect = 6e-07 Identities = 34/35 (97%) Strand = Plus / Minus Query: 137 ccgaatccacgggactgctgcagagtctgggcaaa 171 |||||||||||||||||||||| |||||||||||| Sbjct: 2410 ccgaatccacgggactgctgcaaagtctgggcaaa 2376
>ref|XM_993802.1| PREDICTED: Mus musculus hypothetical protein LOC672481 (LOC672481), mRNA Length = 1059 Score = 42.1 bits (21), Expect = 0.59 Identities = 21/21 (100%) Strand = Plus / Minus Query: 78 cggcagcagcggcggaggcgg 98 ||||||||||||||||||||| Sbjct: 561 cggcagcagcggcggaggcgg 541
>ref|XM_980903.1| PREDICTED: Mus musculus hypothetical protein LOC666010 (LOC666010), mRNA Length = 1071 Score = 42.1 bits (21), Expect = 0.59 Identities = 21/21 (100%) Strand = Plus / Minus Query: 78 cggcagcagcggcggaggcgg 98 ||||||||||||||||||||| Sbjct: 561 cggcagcagcggcggaggcgg 541
>emb|AL669979.13| Mouse DNA sequence from clone RP23-93O11 on chromosome 11 Contains an H+ transporting, mitochondria ATP synthase F0 complex subunit g (Atp5l) pseudogene, the Peli1 gene for pellino 1, a novel pseudogene, a ribosomal protein large P0 (Rplp0) pseudogene, the Vps54 gene for vacuolar protein sorting 54 (yeast), a acyl-Coenzyme A dehydrogenase family (Acad) pseudogene and two CpG islands, complete sequence Length = 206768 Score = 42.1 bits (21), Expect = 0.59 Identities = 21/21 (100%) Strand = Plus / Plus Query: 78 cggcagcagcggcggaggcgg 98 ||||||||||||||||||||| Sbjct: 152454 cggcagcagcggcggaggcgg 152474
>gb|AC020934.9| Homo sapiens chromosome 19 clone CTD-2265O21, complete sequence Length = 119347 Score = 42.1 bits (21), Expect = 0.59 Identities = 21/21 (100%) Strand = Plus / Minus Query: 78 cggcagcagcggcggaggcgg 98 ||||||||||||||||||||| Sbjct: 73466 cggcagcagcggcggaggcgg 73446
>gb|CP000239.1| Synechococcus sp. JA-3-3Ab, complete genome Length = 2932766 Score = 42.1 bits (21), Expect = 0.59 Identities = 21/21 (100%) Strand = Plus / Minus Query: 158 agagtctgggcaaaggcctgg 178 ||||||||||||||||||||| Sbjct: 792266 agagtctgggcaaaggcctgg 792246
>emb|CR609181.1| full-length cDNA clone CS0DJ014YJ23 of T cells (Jurkat cell line) Cot 10-normalized of Homo sapiens (human) Length = 1717 Score = 42.1 bits (21), Expect = 0.59 Identities = 21/21 (100%) Strand = Plus / Minus Query: 78 cggcagcagcggcggaggcgg 98 ||||||||||||||||||||| Sbjct: 70 cggcagcagcggcggaggcgg 50
>gb|AC037426.12| Oryza sativa chromosome 10 BAC OSJNBb0014I11 genomic sequence, complete sequence Length = 135510 Score = 42.1 bits (21), Expect = 0.59 Identities = 21/21 (100%) Strand = Plus / Minus Query: 78 cggcagcagcggcggaggcgg 98 ||||||||||||||||||||| Sbjct: 67194 cggcagcagcggcggaggcgg 67174
>gb|AC156448.2| Volvox carteri clone JGIAOBO-33O24, complete sequence Length = 38975 Score = 42.1 bits (21), Expect = 0.59 Identities = 21/21 (100%) Strand = Plus / Minus Query: 78 cggcagcagcggcggaggcgg 98 ||||||||||||||||||||| Sbjct: 16064 cggcagcagcggcggaggcgg 16044
>dbj|AK063684.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-119-E11, full insert sequence Length = 800 Score = 42.1 bits (21), Expect = 0.59 Identities = 21/21 (100%) Strand = Plus / Plus Query: 78 cggcagcagcggcggaggcgg 98 ||||||||||||||||||||| Sbjct: 228 cggcagcagcggcggaggcgg 248
>gb|AC092241.2| Drosophila melanogaster clone BACR09F02, complete sequence Length = 178190 Score = 40.1 bits (20), Expect = 2.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 79 ggcagcagcggcggaggcgg 98 |||||||||||||||||||| Sbjct: 156284 ggcagcagcggcggaggcgg 156303
>ref|XM_864589.1| PREDICTED: Bos taurus hypothetical protein LOC613623 (LOC613623), mRNA Length = 1038 Score = 40.1 bits (20), Expect = 2.3 Identities = 22/23 (95%) Strand = Plus / Plus Query: 89 gcggaggcggtgcccgcggncgg 111 ||||||||||||||||||| ||| Sbjct: 391 gcggaggcggtgcccgcggccgg 413
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome Length = 4403837 Score = 40.1 bits (20), Expect = 2.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 50 gctgccgctgcagcggatgc 69 |||||||||||||||||||| Sbjct: 1334527 gctgccgctgcagcggatgc 1334546
>gb|AC150554.1| Drosophila melanogaster clone BACR21O10, complete sequence Length = 193926 Score = 40.1 bits (20), Expect = 2.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 81 cagcagcggcggaggcggtg 100 |||||||||||||||||||| Sbjct: 34527 cagcagcggcggaggcggtg 34546
>ref|XM_959072.1| Neurospora crassa OR74A hypothetical protein (NCU03072.1) partial mRNA Length = 3276 Score = 40.1 bits (20), Expect = 2.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 77 tcggcagcagcggcggaggcggtg 100 |||||||||||||||| ||||||| Sbjct: 3155 tcggcagcagcggcggtggcggtg 3178
>ref|XM_330507.1| Neurospora crassa OR74A hypothetical protein (NCU03072.1) partial mRNA Length = 3276 Score = 40.1 bits (20), Expect = 2.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 77 tcggcagcagcggcggaggcggtg 100 |||||||||||||||| ||||||| Sbjct: 3155 tcggcagcagcggcggtggcggtg 3178
>ref|XM_847252.1| PREDICTED: Canis familiaris similar to delta-notch-like EGF repeat-containing transmembrane (LOC609904), mRNA Length = 2219 Score = 40.1 bits (20), Expect = 2.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 45 cttcagctgccgctgcagcg 64 |||||||||||||||||||| Sbjct: 1275 cttcagctgccgctgcagcg 1294
>ref|XM_381999.1| Gibberella zeae PH-1 chromosome 1 hypothetical protein (FG01823.1) partial mRNA Length = 1059 Score = 40.1 bits (20), Expect = 2.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 39 cgtcatcttcagctgccgct 58 |||||||||||||||||||| Sbjct: 946 cgtcatcttcagctgccgct 927
>emb|CR693833.2|CNS0FYB9 Tetraodon nigroviridis full-length cDNA Length = 1178 Score = 40.1 bits (20), Expect = 2.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 78 cggcagcagcggcggaggcggtgc 101 ||||||||||||||| |||||||| Sbjct: 1109 cggcagcagcggcggcggcggtgc 1132
>gb|BC041486.2| Homo sapiens cDNA clone IMAGE:5492202, partial cds Length = 2447 Score = 40.1 bits (20), Expect = 2.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 150 actgctgcagagtctgggca 169 |||||||||||||||||||| Sbjct: 156 actgctgcagagtctgggca 137
>emb|BX842575.1| Mycobacterium tuberculosis H37Rv complete genome; segment 4/13 Length = 349306 Score = 40.1 bits (20), Expect = 2.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 50 gctgccgctgcagcggatgc 69 |||||||||||||||||||| Sbjct: 301253 gctgccgctgcagcggatgc 301272 Score = 38.2 bits (19), Expect = 9.2 Identities = 22/23 (95%) Strand = Plus / Plus Query: 80 gcagcagcggcggaggcggtgcc 102 ||||||||||||| ||||||||| Sbjct: 183775 gcagcagcggcggcggcggtgcc 183797
>emb|BX248338.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 5/14 Length = 299450 Score = 40.1 bits (20), Expect = 2.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 50 gctgccgctgcagcggatgc 69 |||||||||||||||||||| Sbjct: 21690 gctgccgctgcagcggatgc 21709
>ref|NM_204952.1| Gallus gallus forkhead box D2 (FOXD2), mRNA Length = 1708 Score = 40.1 bits (20), Expect = 2.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 79 ggcagcagcggcggaggcgg 98 |||||||||||||||||||| Sbjct: 148 ggcagcagcggcggaggcgg 167
>ref|NM_143742.2| Drosophila melanogaster GCR(ich) CG5812-RA (GCR(ich)), mRNA Length = 1618 Score = 40.1 bits (20), Expect = 2.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 81 cagcagcggcggaggcggtg 100 |||||||||||||||||||| Sbjct: 404 cagcagcggcggaggcggtg 423
>ref|NM_057215.3| Drosophila melanogaster abrupt CG4807-RB, transcript variant B (ab), mRNA Length = 5110 Score = 40.1 bits (20), Expect = 2.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 79 ggcagcagcggcggaggcgg 98 |||||||||||||||||||| Sbjct: 2657 ggcagcagcggcggaggcgg 2676
>ref|NM_057214.3| Drosophila melanogaster abrupt CG4807-RA, transcript variant A (ab), mRNA Length = 5140 Score = 40.1 bits (20), Expect = 2.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 79 ggcagcagcggcggaggcgg 98 |||||||||||||||||||| Sbjct: 2687 ggcagcagcggcggaggcgg 2706
>gb|AC092588.2| Homo sapiens BAC clone RP11-44A12 from 2, complete sequence Length = 140401 Score = 40.1 bits (20), Expect = 2.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 79 ggcagcagcggcggaggcgg 98 |||||||||||||||||||| Sbjct: 131778 ggcagcagcggcggaggcgg 131759
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 2.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 78 cggcagcagcggcggaggcggtgc 101 |||| ||||||||||||||||||| Sbjct: 24840470 cggcggcagcggcggaggcggtgc 24840447
>gb|AC007984.4|AC007984 Drosophila melanogaster, chromosome 3R, region 97D-97E, BAC clone BACR05C10, complete sequence Length = 174894 Score = 40.1 bits (20), Expect = 2.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 81 cagcagcggcggaggcggtg 100 |||||||||||||||||||| Sbjct: 143639 cagcagcggcggaggcggtg 143658
>gb|AC008216.3|AC008216 Drosophila melanogaster, chromosome 3R, region 97E-97E, BAC clone BACR27C22, complete sequence Length = 179486 Score = 40.1 bits (20), Expect = 2.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 81 cagcagcggcggaggcggtg 100 |||||||||||||||||||| Sbjct: 9125 cagcagcggcggaggcggtg 9144
>gb|BT004476.1| Drosophila melanogaster LP07342 full insert cDNA Length = 1608 Score = 40.1 bits (20), Expect = 2.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 81 cagcagcggcggaggcggtg 100 |||||||||||||||||||| Sbjct: 392 cagcagcggcggaggcggtg 411
>gb|BT003807.1| Drosophila melanogaster AT11330 full insert cDNA Length = 1428 Score = 40.1 bits (20), Expect = 2.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 79 ggcagcagcggcggaggcgg 98 |||||||||||||||||||| Sbjct: 538 ggcagcagcggcggaggcgg 557
>gb|AC006073.1|AC006073 Drosophila melanogaster, chromosome 2L, region 32D3-32E2, P1 clones DS05055 and DS02287, complete sequence Length = 94440 Score = 40.1 bits (20), Expect = 2.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 79 ggcagcagcggcggaggcgg 98 |||||||||||||||||||| Sbjct: 77763 ggcagcagcggcggaggcgg 77782
>gb|AE003759.3| Drosophila melanogaster chromosome 3R, section 97 of 118 of the complete sequence Length = 222554 Score = 40.1 bits (20), Expect = 2.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 81 cagcagcggcggaggcggtg 100 |||||||||||||||||||| Sbjct: 33192 cagcagcggcggaggcggtg 33211
>gb|AE003631.4| Drosophila melanogaster chromosome 2L, section 40 of 83 of the complete sequence Length = 256684 Score = 40.1 bits (20), Expect = 2.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 79 ggcagcagcggcggaggcgg 98 |||||||||||||||||||| Sbjct: 201119 ggcagcagcggcggaggcgg 201138
>emb|AL162831.6|CNS01RI2 Human chromosome 14 DNA sequence BAC R-1077A2 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 208102 Score = 40.1 bits (20), Expect = 2.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 150 actgctgcagagtctgggca 169 |||||||||||||||||||| Sbjct: 149462 actgctgcagagtctgggca 149481
>emb|AL161757.4|CNS01RHK Human chromosome 14 DNA sequence BAC R-1085N6 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 242832 Score = 40.1 bits (20), Expect = 2.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 150 actgctgcagagtctgggca 169 |||||||||||||||||||| Sbjct: 52238 actgctgcagagtctgggca 52257
>gb|BT001583.1| Drosophila melanogaster RE25924 full insert cDNA Length = 4854 Score = 40.1 bits (20), Expect = 2.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 79 ggcagcagcggcggaggcgg 98 |||||||||||||||||||| Sbjct: 2658 ggcagcagcggcggaggcgg 2677
>gb|U37272.1|GGU37272 Gallus gallus winged helix protein CWH-1 mRNA, complete cds Length = 1708 Score = 40.1 bits (20), Expect = 2.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 79 ggcagcagcggcggaggcgg 98 |||||||||||||||||||| Sbjct: 148 ggcagcagcggcggaggcgg 167
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 2.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 78 cggcagcagcggcggaggcggtgc 101 |||| ||||||||||||||||||| Sbjct: 24768676 cggcggcagcggcggaggcggtgc 24768653
>emb|AL831797.4|CNS08CAA Oryza sativa chromosome 12, . BAC OSJNBa0010M16 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 132741 Score = 40.1 bits (20), Expect = 2.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 78 cggcagcagcggcggaggcggtgc 101 |||| ||||||||||||||||||| Sbjct: 124398 cggcggcagcggcggaggcggtgc 124421
>gb|U43733.1|DMU43733 Drosophila melanogaster abrupt (ab) mRNA, complete cds Length = 4498 Score = 40.1 bits (20), Expect = 2.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 79 ggcagcagcggcggaggcgg 98 |||||||||||||||||||| Sbjct: 2048 ggcagcagcggcggaggcgg 2067
>emb|AJ271041.1|DME271041 Drosophila melanogaster GCR(ich) gene for gly-rich protein, exons 1-2 Length = 2564 Score = 40.1 bits (20), Expect = 2.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 81 cagcagcggcggaggcggtg 100 |||||||||||||||||||| Sbjct: 1047 cagcagcggcggaggcggtg 1066
>ref|NM_120412.2| Arabidopsis thaliana ATP binding / ATPase/ hydrolase/ nucleoside-triphosphatase/ nucleotide binding AT5G03340 mRNA, complete cds Length = 2671 Score = 38.2 bits (19), Expect = 9.2 Identities = 31/35 (88%) Strand = Plus / Minus Query: 152 tgctgcagagtctgggcaaaggcctggtacttgcg 186 |||||||| ||||| ||||| || ||||||||||| Sbjct: 2398 tgctgcagcgtctgagcaaaagcttggtacttgcg 2364
>ref|XM_472404.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1347 Score = 38.2 bits (19), Expect = 9.2 Identities = 22/23 (95%) Strand = Plus / Plus Query: 78 cggcagcagcggcggaggcggtg 100 ||||||||||||||| ||||||| Sbjct: 176 cggcagcagcggcggcggcggtg 198
>ref|XM_520464.1| PREDICTED: Pan troglodytes similar to Regulatory factor X, 3 (influences HLA class II expression) (LOC464971), mRNA Length = 2786 Score = 38.2 bits (19), Expect = 9.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 156 gcagagtctgggcaaaggc 174 ||||||||||||||||||| Sbjct: 1996 gcagagtctgggcaaaggc 1978
>ref|XM_516034.1| PREDICTED: Pan troglodytes similar to frizzled 2 (LOC459881), mRNA Length = 3168 Score = 38.2 bits (19), Expect = 9.2 Identities = 22/23 (95%) Strand = Plus / Minus Query: 85 agcggcggaggcggtgcccgcgg 107 |||||||||||||||| |||||| Sbjct: 1258 agcggcggaggcggtgtccgcgg 1236
>ref|XM_478167.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3174 Score = 38.2 bits (19), Expect = 9.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 80 gcagcagcggcggaggcgg 98 ||||||||||||||||||| Sbjct: 21 gcagcagcggcggaggcgg 39
>ref|XM_525165.1| PREDICTED: Pan troglodytes similar to chromodomain helicase DNA binding protein 5 (LOC469781), mRNA Length = 7422 Score = 38.2 bits (19), Expect = 9.2 Identities = 22/23 (95%) Strand = Plus / Plus Query: 78 cggcagcagcggcggaggcggtg 100 ||||||||||||||| ||||||| Sbjct: 1550 cggcagcagcggcggcggcggtg 1572
>ref|NM_134428.1| Homo sapiens regulatory factor X, 3 (influences HLA class II expression) (RFX3), transcript variant 2, mRNA Length = 3018 Score = 38.2 bits (19), Expect = 9.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 156 gcagagtctgggcaaaggc 174 ||||||||||||||||||| Sbjct: 1801 gcagagtctgggcaaaggc 1783
>ref|NM_002919.2| Homo sapiens regulatory factor X, 3 (influences HLA class II expression) (RFX3), transcript variant 1, mRNA Length = 3275 Score = 38.2 bits (19), Expect = 9.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 156 gcagagtctgggcaaaggc 174 ||||||||||||||||||| Sbjct: 1801 gcagagtctgggcaaaggc 1783
>ref|NM_015557.1| Homo sapiens chromodomain helicase DNA binding protein 5 (CHD5), mRNA Length = 9646 Score = 38.2 bits (19), Expect = 9.2 Identities = 22/23 (95%) Strand = Plus / Plus Query: 78 cggcagcagcggcggaggcggtg 100 ||||||||||||||| ||||||| Sbjct: 717 cggcagcagcggcggcggcggtg 739
>gb|AC105259.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1115_B04, complete sequence Length = 95383 Score = 38.2 bits (19), Expect = 9.2 Identities = 22/23 (95%) Strand = Plus / Minus Query: 78 cggcagcagcggcggaggcggtg 100 ||||||||||||||| ||||||| Sbjct: 91764 cggcagcagcggcggcggcggtg 91742
>gb|BT021882.1| Bos taurus cyclin-dependent kinase 9 (CDC2-related kinase) (CDK9), mRNA, complete cds Length = 1752 Score = 38.2 bits (19), Expect = 9.2 Identities = 22/23 (95%) Strand = Plus / Plus Query: 78 cggcagcagcggcggaggcggtg 100 ||||||||||||||| ||||||| Sbjct: 2 cggcagcagcggcggcggcggtg 24
>gb|AC145477.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1402B06, complete sequence Length = 134001 Score = 38.2 bits (19), Expect = 9.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 80 gcagcagcggcggaggcgg 98 ||||||||||||||||||| Sbjct: 23906 gcagcagcggcggaggcgg 23888
>ref|XM_618263.2| PREDICTED: Bos taurus similar to Transcription factor RFX3 (LOC538070), partial mRNA Length = 1918 Score = 38.2 bits (19), Expect = 9.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 156 gcagagtctgggcaaaggc 174 ||||||||||||||||||| Sbjct: 1455 gcagagtctgggcaaaggc 1437
>ref|XM_424929.1| PREDICTED: Gallus gallus similar to regulatory factor X3 isoform b; DNA binding protein RFX3 (LOC427351), mRNA Length = 2452 Score = 38.2 bits (19), Expect = 9.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 156 gcagagtctgggcaaaggc 174 ||||||||||||||||||| Sbjct: 1648 gcagagtctgggcaaaggc 1630
>gb|AC108882.4| Homo sapiens chromosome X clone RP11-77G22 map p11.4, complete sequence Length = 173352 Score = 38.2 bits (19), Expect = 9.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 80 gcagcagcggcggaggcgg 98 ||||||||||||||||||| Sbjct: 73742 gcagcagcggcggaggcgg 73760
>gb|AC092474.3| Homo sapiens chromosome X clone RP11-169L17 map p11.4, complete sequence Length = 170227 Score = 38.2 bits (19), Expect = 9.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 80 gcagcagcggcggaggcgg 98 ||||||||||||||||||| Sbjct: 159336 gcagcagcggcggaggcgg 159354
>ref|XM_955588.1| Neurospora crassa OR74A hypothetical protein (NCU08957.1) partial mRNA Length = 4206 Score = 38.2 bits (19), Expect = 9.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 45 cttcagctgccgctgcagc 63 ||||||||||||||||||| Sbjct: 3014 cttcagctgccgctgcagc 3032
>ref|XM_331348.1| Neurospora crassa OR74A hypothetical protein (NCU08957.1) partial mRNA Length = 4206 Score = 38.2 bits (19), Expect = 9.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 45 cttcagctgccgctgcagc 63 ||||||||||||||||||| Sbjct: 3014 cttcagctgccgctgcagc 3032
>ref|XM_753385.1| Ustilago maydis 521 hypothetical protein (UM02331.1) partial mRNA Length = 1602 Score = 38.2 bits (19), Expect = 9.2 Identities = 28/31 (90%) Strand = Plus / Minus Query: 61 agcggatgcaaaaggatcggcagcagcggcg 91 |||||||| | ||||||||||| |||||||| Sbjct: 78 agcggatggacaaggatcggcatcagcggcg 48
>ref|XM_817692.1| Trypanosoma brucei TREU927 hypothetical protein (Tb10.70.1640) partial mRNA Length = 1845 Score = 38.2 bits (19), Expect = 9.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 47 tcagctgccgctgcagcgg 65 ||||||||||||||||||| Sbjct: 199 tcagctgccgctgcagcgg 217
>ref|XM_849796.1| PREDICTED: Canis familiaris similar to HMG-box transcription factor TCF-3 (LOC612070), mRNA Length = 2313 Score = 38.2 bits (19), Expect = 9.2 Identities = 22/23 (95%) Strand = Plus / Plus Query: 78 cggcagcagcggcggaggcggtg 100 ||||||| ||||||||||||||| Sbjct: 372 cggcagcggcggcggaggcggtg 394
>ref|XM_856001.1| PREDICTED: Canis familiaris similar to regulatory factor X3 isoform b, transcript variant 4 (LOC476339), mRNA Length = 2366 Score = 38.2 bits (19), Expect = 9.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 156 gcagagtctgggcaaaggc 174 ||||||||||||||||||| Sbjct: 1414 gcagagtctgggcaaaggc 1396
>ref|XM_855977.1| PREDICTED: Canis familiaris similar to regulatory factor X3 isoform b, transcript variant 3 (LOC476339), mRNA Length = 2465 Score = 38.2 bits (19), Expect = 9.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 156 gcagagtctgggcaaaggc 174 ||||||||||||||||||| Sbjct: 1513 gcagagtctgggcaaaggc 1495
>ref|XM_855949.1| PREDICTED: Canis familiaris similar to regulatory factor X3 isoform b, transcript variant 2 (LOC476339), mRNA Length = 1778 Score = 38.2 bits (19), Expect = 9.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 156 gcagagtctgggcaaaggc 174 ||||||||||||||||||| Sbjct: 1414 gcagagtctgggcaaaggc 1396
>ref|XM_533540.2| PREDICTED: Canis familiaris similar to regulatory factor X3 isoform b, transcript variant 1 (LOC476339), mRNA Length = 2441 Score = 38.2 bits (19), Expect = 9.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 156 gcagagtctgggcaaaggc 174 ||||||||||||||||||| Sbjct: 1489 gcagagtctgggcaaaggc 1471
>emb|AL133549.11| Human DNA sequence from clone RP11-32F11 on chromosome 9p24.1-24.3 Contains the 3'end of the RFX3 gene for regulatory factor X 3 (influences HLA class II expression), a novel gene and a CpG island, complete sequence Length = 162237 Score = 38.2 bits (19), Expect = 9.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 156 gcagagtctgggcaaaggc 174 ||||||||||||||||||| Sbjct: 148280 gcagagtctgggcaaaggc 148298
>emb|AL031847.17|HS120G22 Human DNA sequence from clone RP1-120G22 on chromosome 1p36.21-36.33 Contains the 5' end of the CHD5 gene for chromodomain helicase DNA binding protein 5, the RPL22 gene for ribosomal protein L22, eight novel genes, the ICMT gene for isoprenylcysteine carboxyl methyltransferase, possible ortholog of rodent transcription factor HES-3, the 3' end of the gene for brain acyl-CoA hydrolase (BACH) and seven CpG islands, complete sequence Length = 166518 Score = 38.2 bits (19), Expect = 9.2 Identities = 22/23 (95%) Strand = Plus / Plus Query: 78 cggcagcagcggcggaggcggtg 100 ||||||||||||||| ||||||| Sbjct: 155075 cggcagcagcggcggcggcggtg 155097
>emb|BX028305.1|CNS08U05 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA42BC03 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 1003 Score = 38.2 bits (19), Expect = 9.2 Identities = 31/35 (88%) Strand = Plus / Plus Query: 137 ccgaatccacgggactgctgcagagtctgggcaaa 171 ||||||||||| || |||||||| || |||||||| Sbjct: 831 ccgaatccacgagattgctgcagcgtttgggcaaa 865
>emb|BX027063.1|CNS08T1N Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA40CD02 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 1007 Score = 38.2 bits (19), Expect = 9.2 Identities = 31/35 (88%) Strand = Plus / Plus Query: 137 ccgaatccacgggactgctgcagagtctgggcaaa 171 ||||||||||| || |||||||| || |||||||| Sbjct: 838 ccgaatccacgagattgctgcagcgtttgggcaaa 872
>emb|X76092.1|HSRFX3 H.sapiens HRFX3 mRNA Length = 2514 Score = 38.2 bits (19), Expect = 9.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 156 gcagagtctgggcaaaggc 174 ||||||||||||||||||| Sbjct: 1497 gcagagtctgggcaaaggc 1479
>emb|BX248337.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 4/14 Length = 327650 Score = 38.2 bits (19), Expect = 9.2 Identities = 22/23 (95%) Strand = Plus / Plus Query: 80 gcagcagcggcggaggcggtgcc 102 ||||||||||||| ||||||||| Sbjct: 231943 gcagcagcggcggcggcggtgcc 231965
>emb|AL593845.5| Zebrafish DNA sequence from clone BUSM1-142B24 in linkage group 17 Contains a novel gene for a protein similar to human FLJ11186, a novel gene similar to human KIAA1316 and fly CG2747, a novel gene for a protein with a HECT-domain (ubiquitin-transferase) and a CpG island, complete sequence Length = 89159 Score = 38.2 bits (19), Expect = 9.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 35 aagtcgtcatcttcagctg 53 ||||||||||||||||||| Sbjct: 75486 aagtcgtcatcttcagctg 75504
>emb|AL662947.3|OSJN00148 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0073L04, complete sequence Length = 143301 Score = 38.2 bits (19), Expect = 9.2 Identities = 22/23 (95%) Strand = Plus / Plus Query: 78 cggcagcagcggcggaggcggtg 100 ||||||||||||||| ||||||| Sbjct: 133519 cggcagcagcggcggcggcggtg 133541
>emb|AL662945.3|OSJN00141 Oryza sativa genomic DNA, chromosome 4, BAC clone: OJ000126_13, complete sequence Length = 113960 Score = 38.2 bits (19), Expect = 9.2 Identities = 22/23 (95%) Strand = Plus / Plus Query: 78 cggcagcagcggcggaggcggtg 100 ||||||||||||||| ||||||| Sbjct: 16306 cggcagcagcggcggcggcggtg 16328
>emb|AL162751.1|ATF12E4 Arabidopsis thaliana DNA chromosome 5, BAC clone F12E4 (ESSA project) Length = 121552 Score = 38.2 bits (19), Expect = 9.2 Identities = 31/35 (88%) Strand = Plus / Plus Query: 152 tgctgcagagtctgggcaaaggcctggtacttgcg 186 |||||||| ||||| ||||| || ||||||||||| Sbjct: 24032 tgctgcagcgtctgagcaaaagcttggtacttgcg 24066
>emb|AJ505152.1|UMA505152 Ustilago maydis kpp6 gene for MAP kinase and partial ORF1 Length = 6782 Score = 38.2 bits (19), Expect = 9.2 Identities = 28/31 (90%) Strand = Plus / Minus Query: 61 agcggatgcaaaaggatcggcagcagcggcg 91 |||||||| | ||||||||||| |||||||| Sbjct: 2745 agcggatggacaaggatcggcatcagcggcg 2715
>gb|BC022191.2| Homo sapiens regulatory factor X, 3 (influences HLA class II expression), transcript variant 2, mRNA (cDNA clone MGC:3664 IMAGE:3531443), complete cds Length = 3017 Score = 38.2 bits (19), Expect = 9.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 156 gcagagtctgggcaaaggc 174 ||||||||||||||||||| Sbjct: 1800 gcagagtctgggcaaaggc 1782
>gb|AF202034.1| Drosophila melanogaster endoplasmic reticulum membrane fusion protein (TER94) mRNA, complete cds Length = 2998 Score = 38.2 bits (19), Expect = 9.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 137 ccgaatccacgggactgct 155 ||||||||||||||||||| Sbjct: 2394 ccgaatccacgggactgct 2376
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 38.2 bits (19), Expect = 9.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 70 aaaaggatcggcagcagcg 88 ||||||||||||||||||| Sbjct: 5066094 aaaaggatcggcagcagcg 5066112
>gb|AC105350.2| Drosophila melanogaster X BAC RP98-30C13 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 184334 Score = 38.2 bits (19), Expect = 9.2 Identities = 22/23 (95%) Strand = Plus / Plus Query: 78 cggcagcagcggcggaggcggtg 100 ||||||||||||||| ||||||| Sbjct: 40162 cggcagcagcggcggcggcggtg 40184
>dbj|AK127046.1| Homo sapiens cDNA FLJ45103 fis, clone BRAWH3032571, moderately similar to Chromodomain helicase-DNA-binding protein 4 Length = 4966 Score = 38.2 bits (19), Expect = 9.2 Identities = 22/23 (95%) Strand = Plus / Plus Query: 78 cggcagcagcggcggaggcggtg 100 ||||||||||||||| ||||||| Sbjct: 617 cggcagcagcggcggcggcggtg 639
>dbj|AK122767.1| Homo sapiens cDNA FLJ16306 fis, clone PUAEN2003954, highly similar to Homo sapiens mitogen-activated protein kinase-activated protein kinase 5 Length = 2527 Score = 38.2 bits (19), Expect = 9.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 80 gcagcagcggcggaggcgg 98 ||||||||||||||||||| Sbjct: 560 gcagcagcggcggaggcgg 542
>dbj|AK096935.1| Homo sapiens cDNA FLJ39616 fis, clone SMINT2000541 Length = 2285 Score = 38.2 bits (19), Expect = 9.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 80 gcagcagcggcggaggcgg 98 ||||||||||||||||||| Sbjct: 366 gcagcagcggcggaggcgg 384
>ref|NM_167189.2| Drosophila melanogaster CG32705-RA (CG32705), mRNA Length = 4705 Score = 38.2 bits (19), Expect = 9.2 Identities = 22/23 (95%) Strand = Plus / Plus Query: 78 cggcagcagcggcggaggcggtg 100 ||||||||||||||| ||||||| Sbjct: 1442 cggcagcagcggcggcggcggtg 1464
>gb|AF425231.1| Homo sapiens chromodomain helicase DNA binding protein 5 (CHD5) mRNA, complete cds Length = 9646 Score = 38.2 bits (19), Expect = 9.2 Identities = 22/23 (95%) Strand = Plus / Plus Query: 78 cggcagcagcggcggaggcggtg 100 ||||||||||||||| ||||||| Sbjct: 717 cggcagcagcggcggcggcggtg 739
>ref|NM_003668.2| Homo sapiens mitogen-activated protein kinase-activated protein kinase 5 (MAPKAPK5), transcript variant 1, mRNA Length = 2060 Score = 38.2 bits (19), Expect = 9.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 80 gcagcagcggcggaggcgg 98 ||||||||||||||||||| Sbjct: 63 gcagcagcggcggaggcgg 45
>ref|NM_139078.1| Homo sapiens mitogen-activated protein kinase-activated protein kinase 5 (MAPKAPK5), transcript variant 2, mRNA Length = 2066 Score = 38.2 bits (19), Expect = 9.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 80 gcagcagcggcggaggcgg 98 ||||||||||||||||||| Sbjct: 63 gcagcagcggcggaggcgg 45
>gb|AC169375.4| Sorghum bicolor clone SB_BBc0020O07, complete sequence Length = 117931 Score = 38.2 bits (19), Expect = 9.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 89 gcggaggcggtgcccgcgg 107 ||||||||||||||||||| Sbjct: 15075 gcggaggcggtgcccgcgg 15093
>dbj|AB179278.1| Macaca fascicularis testis cDNA clone: QtsA-16695, similar to human regulatory factor X, 3 (influences HLA class IIexpression) (RFX3), transcript variant 2, mRNA, RefSeq: NM_134428.1 Length = 2376 Score = 38.2 bits (19), Expect = 9.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 156 gcagagtctgggcaaaggc 174 ||||||||||||||||||| Sbjct: 1555 gcagagtctgggcaaaggc 1537
>dbj|AB168435.1| Macaca fascicularis testis cDNA clone: QtsA-12177, similar to human regulatory factor X, 3 (influences HLA class IIexpression) (RFX3), transcript variant 2, mRNA, RefSeq: NM_134428.1 Length = 2235 Score = 38.2 bits (19), Expect = 9.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 156 gcagagtctgggcaaaggc 174 ||||||||||||||||||| Sbjct: 1414 gcagagtctgggcaaaggc 1396
>gb|AC013436.5| Homo sapiens BAC clone RP11-105B9 from 7, complete sequence Length = 63823 Score = 38.2 bits (19), Expect = 9.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 41 tcatcttcagctgccgctg 59 ||||||||||||||||||| Sbjct: 37051 tcatcttcagctgccgctg 37033
>gb|BC023547.2| Homo sapiens chromosome 12 open reading frame 47, mRNA (cDNA clone IMAGE:4110415) Length = 1954 Score = 38.2 bits (19), Expect = 9.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 80 gcagcagcggcggaggcgg 98 ||||||||||||||||||| Sbjct: 17 gcagcagcggcggaggcgg 35
>gb|BT006485.1| Arabidopsis thaliana At5g03340 gene, complete cds Length = 2433 Score = 38.2 bits (19), Expect = 9.2 Identities = 31/35 (88%) Strand = Plus / Minus Query: 152 tgctgcagagtctgggcaaaggcctggtacttgcg 186 |||||||| ||||| ||||| || ||||||||||| Sbjct: 2303 tgctgcagcgtctgagcaaaagcttggtacttgcg 2269
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 38.2 bits (19), Expect = 9.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 73 aggatcggcagcagcggcg 91 ||||||||||||||||||| Sbjct: 1450957 aggatcggcagcagcggcg 1450939
>ref|NG_004713.1| Homo sapiens makorin, ring finger protein, 4 (MKRN4) pseudogene on chromosome X Length = 3869 Score = 38.2 bits (19), Expect = 9.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 80 gcagcagcggcggaggcgg 98 ||||||||||||||||||| Sbjct: 494 gcagcagcggcggaggcgg 512
>gb|BT022162.1| Drosophila melanogaster IP01380 full insert cDNA Length = 1215 Score = 38.2 bits (19), Expect = 9.2 Identities = 22/23 (95%) Strand = Plus / Plus Query: 78 cggcagcagcggcggaggcggtg 100 ||||||||||||||| ||||||| Sbjct: 1019 cggcagcagcggcggcggcggtg 1041
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 38.2 bits (19), Expect = 9.2 Identities = 22/23 (95%) Strand = Plus / Plus Query: 78 cggcagcagcggcggaggcggtg 100 ||||||||||||||| ||||||| Sbjct: 20402886 cggcagcagcggcggcggcggtg 20402908
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 38.2 bits (19), Expect = 9.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 80 gcagcagcggcggaggcgg 98 ||||||||||||||||||| Sbjct: 18164510 gcagcagcggcggaggcgg 18164492
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 38.2 bits (19), Expect = 9.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 80 gcagcagcggcggaggcgg 98 ||||||||||||||||||| Sbjct: 26836086 gcagcagcggcggaggcgg 26836068
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 38.2 bits (19), Expect = 9.2 Identities = 22/23 (95%) Strand = Plus / Minus Query: 78 cggcagcagcggcggaggcggtg 100 ||||||||||||||| ||||||| Sbjct: 8513494 cggcagcagcggcggcggcggtg 8513472 Score = 38.2 bits (19), Expect = 9.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 80 gcagcagcggcggaggcgg 98 ||||||||||||||||||| Sbjct: 7746320 gcagcagcggcggaggcgg 7746302
>gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome Length = 3304561 Score = 38.2 bits (19), Expect = 9.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 74 ggatcggcagcagcggcgg 92 ||||||||||||||||||| Sbjct: 1058684 ggatcggcagcagcggcgg 1058702
>gb|AC003029.5| Homo sapiens 12 PAC RP3-462E2 (Roswell Park Cancer institute Human PAC Library) complete sequence Length = 137830 Score = 38.2 bits (19), Expect = 9.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 80 gcagcagcggcggaggcgg 98 ||||||||||||||||||| Sbjct: 51319 gcagcagcggcggaggcgg 51301
>ref|NM_001006661.1| Danio rerio si:busm1-142b24.1 (si:busm1-142b24.1), mRNA Length = 3576 Score = 38.2 bits (19), Expect = 9.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 35 aagtcgtcatcttcagctg 53 ||||||||||||||||||| Sbjct: 3035 aagtcgtcatcttcagctg 3017
>gb|AE004574.1| Pseudomonas aeruginosa PAO1, section 135 of 529 of the complete genome Length = 12144 Score = 38.2 bits (19), Expect = 9.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 84 cagcggcggaggcggtgcc 102 ||||||||||||||||||| Sbjct: 8402 cagcggcggaggcggtgcc 8420
>gb|AC091712.3| Rattus norvegicus strain Brown Norway clone RP31-64M17, complete sequence Length = 157848 Score = 38.2 bits (19), Expect = 9.2 Identities = 22/23 (95%) Strand = Plus / Minus Query: 151 ctgctgcagagtctgggcaaagg 173 ||||||||||||||| ||||||| Sbjct: 91149 ctgctgcagagtctgagcaaagg 91127
>ref|XM_574648.1| PREDICTED: Rattus norvegicus regulatory factor X, 3 (influences HLA class II expression) (predicted) (Rfx3_predicted), mRNA Length = 2888 Score = 38.2 bits (19), Expect = 9.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 156 gcagagtctgggcaaaggc 174 ||||||||||||||||||| Sbjct: 1821 gcagagtctgggcaaaggc 1803
>ref|NM_001014935.1| Bos taurus cyclin-dependent kinase 9 (LOC520580), mRNA Length = 1752 Score = 38.2 bits (19), Expect = 9.2 Identities = 22/23 (95%) Strand = Plus / Plus Query: 78 cggcagcagcggcggaggcggtg 100 ||||||||||||||| ||||||| Sbjct: 2 cggcagcagcggcggcggcggtg 24
>dbj|AP005190.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0477A12 Length = 138141 Score = 38.2 bits (19), Expect = 9.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 80 gcagcagcggcggaggcgg 98 ||||||||||||||||||| Sbjct: 99816 gcagcagcggcggaggcgg 99798
>dbj|AP005769.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0051O02 Length = 169532 Score = 38.2 bits (19), Expect = 9.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 80 gcagcagcggcggaggcgg 98 ||||||||||||||||||| Sbjct: 90712 gcagcagcggcggaggcgg 90694
>dbj|AK118571.1| Arabidopsis thaliana At5g03340 mRNA for putative transitional endoplasmic reticulum ATPase, complete cds, clone: RAFL19-80-L03 Length = 2671 Score = 38.2 bits (19), Expect = 9.2 Identities = 31/35 (88%) Strand = Plus / Minus Query: 152 tgctgcagagtctgggcaaaggcctggtacttgcg 186 |||||||| ||||| ||||| || ||||||||||| Sbjct: 2398 tgctgcagcgtctgagcaaaagcttggtacttgcg 2364
>dbj|AK117125.1| Arabidopsis thaliana At5g03340 mRNA for putative transitional endoplasmic reticulum ATPase, complete cds, clone: RAFL16-66-D01 Length = 2664 Score = 38.2 bits (19), Expect = 9.2 Identities = 31/35 (88%) Strand = Plus / Minus Query: 152 tgctgcagagtctgggcaaaggcctggtacttgcg 186 |||||||| ||||| ||||| || ||||||||||| Sbjct: 2391 tgctgcagcgtctgagcaaaagcttggtacttgcg 2357
>dbj|AB110234.1| Trypanosoma brucei SST-REX A13 mRNA for putative 3-transmembrane protein A13, complete cds Length = 1857 Score = 38.2 bits (19), Expect = 9.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 47 tcagctgccgctgcagcgg 65 ||||||||||||||||||| Sbjct: 131 tcagctgccgctgcagcgg 149
>dbj|AK121998.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033110E10, full insert sequence Length = 1343 Score = 38.2 bits (19), Expect = 9.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 80 gcagcagcggcggaggcgg 98 ||||||||||||||||||| Sbjct: 138 gcagcagcggcggaggcgg 120
>ref|XM_315644.2| Anopheles gambiae str. PEST ENSANGP00000022801 (ENSANGG00000019258), partial mRNA Length = 2559 Score = 38.2 bits (19), Expect = 9.2 Identities = 31/35 (88%) Strand = Plus / Minus Query: 137 ccgaatccacgggactgctgcagagtctgggcaaa 171 ||||||||||| || |||||||| || |||||||| Sbjct: 2300 ccgaatccacgagattgctgcagcgtttgggcaaa 2266
>dbj|AK070976.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023073E17, full insert sequence Length = 3174 Score = 38.2 bits (19), Expect = 9.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 80 gcagcagcggcggaggcgg 98 ||||||||||||||||||| Sbjct: 21 gcagcagcggcggaggcgg 39
>gb|BC041049.1| Homo sapiens mitogen-activated protein kinase-activated protein kinase 5, transcript variant 1, mRNA (cDNA clone MGC:52129 IMAGE:4909021), complete cds Length = 2024 Score = 38.2 bits (19), Expect = 9.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 80 gcagcagcggcggaggcgg 98 ||||||||||||||||||| Sbjct: 297 gcagcagcggcggaggcgg 279
>dbj|AK060508.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-019-B12, full insert sequence Length = 1751 Score = 38.2 bits (19), Expect = 9.2 Identities = 22/23 (95%) Strand = Plus / Plus Query: 78 cggcagcagcggcggaggcggtg 100 ||||||||||||||| ||||||| Sbjct: 364 cggcagcagcggcggcggcggtg 386
>dbj|AK058614.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-018-B01, full insert sequence Length = 1380 Score = 38.2 bits (19), Expect = 9.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 80 gcagcagcggcggaggcgg 98 ||||||||||||||||||| Sbjct: 175 gcagcagcggcggaggcgg 157
>gb|AC155176.6| Mus musculus 10 BAC RP24-219F17 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 186725 Score = 38.2 bits (19), Expect = 9.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 163 ctgggcaaaggcctggtac 181 ||||||||||||||||||| Sbjct: 120200 ctgggcaaaggcctggtac 120182
>gb|AE003446.4| Drosophila melanogaster chromosome X, section 30 of 74 of the complete sequence Length = 290970 Score = 38.2 bits (19), Expect = 9.2 Identities = 22/23 (95%) Strand = Plus / Minus Query: 78 cggcagcagcggcggaggcggtg 100 ||||||||||||||| ||||||| Sbjct: 283559 cggcagcagcggcggcggcggtg 283537
>gb|BC085953.1| Rattus norvegicus regulatory factor X, 3 (influences HLA class II expression), mRNA (cDNA clone MGC:95287 IMAGE:7134397), complete cds Length = 2441 Score = 38.2 bits (19), Expect = 9.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 156 gcagagtctgggcaaaggc 174 ||||||||||||||||||| Sbjct: 1349 gcagagtctgggcaaaggc 1331
>ref|NM_001012172.1| Rattus norvegicus regulatory factor X, 3 (influences HLA class II expression) (Rfx3), mRNA Length = 2441 Score = 38.2 bits (19), Expect = 9.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 156 gcagagtctgggcaaaggc 174 ||||||||||||||||||| Sbjct: 1349 gcagagtctgggcaaaggc 1331
>gb|U41315.1|HSU41315 Human ring zinc-finger protein (ZNF127-Xp) gene and 5' flanking sequence Length = 9358 Score = 38.2 bits (19), Expect = 9.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 80 gcagcagcggcggaggcgg 98 ||||||||||||||||||| Sbjct: 5158 gcagcagcggcggaggcgg 5176
>gb|M15767.1|DROPENFSD D.melanogaster pen repeat mRNA, clone p16 Length = 562 Score = 38.2 bits (19), Expect = 9.2 Identities = 22/23 (95%) Strand = Plus / Plus Query: 78 cggcagcagcggcggaggcggtg 100 ||||||||||||||| ||||||| Sbjct: 416 cggcagcagcggcggcggcggtg 438
>gb|AC132487.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0499F10, complete sequence Length = 75032 Score = 38.2 bits (19), Expect = 9.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 80 gcagcagcggcggaggcgg 98 ||||||||||||||||||| Sbjct: 56828 gcagcagcggcggaggcgg 56810 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,231,869 Number of Sequences: 3902068 Number of extensions: 1231869 Number of successful extensions: 112563 Number of sequences better than 10.0: 156 Number of HSP's better than 10.0 without gapping: 158 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 111035 Number of HSP's gapped (non-prelim): 1528 length of query: 187 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 165 effective length of database: 17,147,199,772 effective search space: 2829287962380 effective search space used: 2829287962380 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)
