ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbah61k22
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1PEAM2_ARATH (Q944H0) Putative phosphoethanolamine N-methyltransf... 67 8e-12
2PEAM3_ARATH (Q9C6B9) Putative phosphoethanolamine N-methyltransf... 64 7e-11
3PEAM1_ARATH (Q9FR44) Phosphoethanolamine N-methyltransferase 1 (... 63 2e-10
4PEAMT_SPIOL (Q9M571) Phosphoethanolamine N-methyltransferase (EC... 62 4e-10
5TF65_CHICK (P98152) Transcription factor p65 (Nuclear factor NF-... 30 1.4
6M3K13_PONPY (Q5R8X7) Mitogen-activated protein kinase kinase kin... 28 4.1
7R1_SOLTU (Q9AWA5) Alpha-glucan water dikinase, chloroplast precu... 28 7.0
8M3K13_HUMAN (O43283) Mitogen-activated protein kinase kinase kin... 28 7.0
9BLI1_CAEEL (Q09457) Cuticle collagen bli-1 (Blistered cuticle pr... 27 9.2

>PEAM2_ARATH (Q944H0) Putative phosphoethanolamine N-methyltransferase 2 (EC|
           2.1.1.103)
          Length = 475

 Score = 67.4 bits (163), Expect = 8e-12
 Identities = 28/38 (73%), Positives = 36/38 (94%)
 Frame = -2

Query: 373 FLADFSQEDYDDIVNGWSAKLKRSSAGEQKWGLFIATK 260
           F++DFS+EDY+DIV GWSAKL+R+++GEQKWGLFIA K
Sbjct: 437 FISDFSEEDYNDIVGGWSAKLERTASGEQKWGLFIADK 474



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>PEAM3_ARATH (Q9C6B9) Putative phosphoethanolamine N-methyltransferase 3 (EC|
           2.1.1.103)
          Length = 490

 Score = 64.3 bits (155), Expect = 7e-11
 Identities = 26/38 (68%), Positives = 34/38 (89%)
 Frame = -2

Query: 373 FLADFSQEDYDDIVNGWSAKLKRSSAGEQKWGLFIATK 260
           F++DFS+EDY+DI+ GW +KL RSS+GEQKWGLFIA +
Sbjct: 452 FISDFSKEDYEDIIGGWKSKLLRSSSGEQKWGLFIAKR 489



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>PEAM1_ARATH (Q9FR44) Phosphoethanolamine N-methyltransferase 1 (EC 2.1.1.103)|
           (PEAMT 1) (AtNMT1)
          Length = 491

 Score = 63.2 bits (152), Expect = 2e-10
 Identities = 26/38 (68%), Positives = 33/38 (86%)
 Frame = -2

Query: 373 FLADFSQEDYDDIVNGWSAKLKRSSAGEQKWGLFIATK 260
           F++DFS+EDYDDIV GW +KL+R ++ EQKWGLFIA K
Sbjct: 453 FISDFSKEDYDDIVGGWKSKLERCASDEQKWGLFIANK 490



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>PEAMT_SPIOL (Q9M571) Phosphoethanolamine N-methyltransferase (EC 2.1.1.103)|
          Length = 494

 Score = 61.6 bits (148), Expect = 4e-10
 Identities = 26/38 (68%), Positives = 33/38 (86%)
 Frame = -2

Query: 373 FLADFSQEDYDDIVNGWSAKLKRSSAGEQKWGLFIATK 260
           F+ DFS+EDY+DIV+GW AKL R++ GEQ+WGLFIA K
Sbjct: 456 FIDDFSEEDYNDIVDGWKAKLVRTTEGEQQWGLFIAKK 493



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>TF65_CHICK (P98152) Transcription factor p65 (Nuclear factor NF-kappa-B p65|
           subunit)
          Length = 558

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 21/58 (36%), Positives = 27/58 (46%), Gaps = 5/58 (8%)
 Frame = +3

Query: 3   RYKXESRSSHNKVQGTHST-----YVHIIILQIRVPGRPVQPLEQQITPHPTHGHSMV 161
           RYK E RS+   + G HST     +  I +   R PGR    L  +  PH  H H +V
Sbjct: 41  RYKCEGRSA-GSIPGEHSTDSARTHPTIRVNHYRGPGRVRVSLVTKDPPHGPHPHELV 97



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>M3K13_PONPY (Q5R8X7) Mitogen-activated protein kinase kinase kinase 13 (EC|
           2.7.11.25)
          Length = 966

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 21/74 (28%), Positives = 34/74 (45%), Gaps = 6/74 (8%)
 Frame = +3

Query: 3   RYKXESRSSHNKVQGTHSTYVHIIILQIRVPGRPVQPLEQQITPHPTHGHS------MVE 164
           RY+ + R      +G+HS +V I+           QP  Q+ +P+PT+ H        + 
Sbjct: 583 RYRSKPRHRRGNSRGSHSDFVAIL---------KNQP-AQENSPNPTYLHQAQSQYPSLH 632

Query: 165 HRSSLFNS*PKPKP 206
           HR+SL     +P P
Sbjct: 633 HRNSLQQQYQQPPP 646



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>R1_SOLTU (Q9AWA5) Alpha-glucan water dikinase, chloroplast precursor (EC|
           2.7.9.4) (Starch-related R1 protein)
          Length = 1464

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 12/32 (37%), Positives = 18/32 (56%), Gaps = 3/32 (9%)
 Frame = -2

Query: 358 SQEDYDDIV---NGWSAKLKRSSAGEQKWGLF 272
           S +D +D+V    GW+  L  S+ G+  W LF
Sbjct: 900 SVDDNEDLVYCLKGWNQALSMSNGGDNHWALF 931



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>M3K13_HUMAN (O43283) Mitogen-activated protein kinase kinase kinase 13 (EC|
           2.7.11.25) (Mixed lineage kinase) (MLK) (Leucine
           zipper-bearing kinase)
          Length = 966

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 20/74 (27%), Positives = 32/74 (43%), Gaps = 6/74 (8%)
 Frame = +3

Query: 3   RYKXESRSSHNKVQGTHSTYVHIIILQIRVPGRPVQPLEQQITPHPTHGHS------MVE 164
           RY+ + R      +G+HS +  I+           QP  Q+ +PHPT+ H        + 
Sbjct: 583 RYRSKPRHRRGNSRGSHSDFAAIL---------KNQP-AQENSPHPTYLHQAQSQYPSLH 632

Query: 165 HRSSLFNS*PKPKP 206
           H +SL     +P P
Sbjct: 633 HHNSLQQQYQQPPP 646



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>BLI1_CAEEL (Q09457) Cuticle collagen bli-1 (Blistered cuticle protein 1)|
          Length = 963

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 14/39 (35%), Positives = 19/39 (48%)
 Frame = +3

Query: 87  RVPGRPVQPLEQQITPHPTHGHSMVEHRSSLFNS*PKPK 203
           R P    +P   Q  P  +  HS   +R+SL+N  P PK
Sbjct: 180 REPASSRRPYPPQQPPSTSAPHSSPNNRTSLYNPQPPPK 218


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 41,942,491
Number of Sequences: 219361
Number of extensions: 729508
Number of successful extensions: 2444
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2405
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2443
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 1402043640
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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