ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbah61k12 |
|---|---|
| Clone Library Name | barley_pub |
>CD48D_ARATH (Q9SCN8) Putative cell division control protein 48 homolog D| (AtCDC48d) (Transitional endoplasmic reticulum ATPase D) Length = 815 Score = 194 bits (493), Expect = 2e-49 Identities = 101/141 (71%), Positives = 109/141 (77%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSGADITEICQRACKY 479 RLDQLIYIPLPD +SR+QIFK+CLRKSP+AKD+DL ALAKYTQGFSGADITEICQR+CKY Sbjct: 642 RLDQLIYIPLPDEESRYQIFKSCLRKSPVAKDVDLRALAKYTQGFSGADITEICQRSCKY 701 Query: 478 AIXXXXXXXXXXXXXXXXNPXXXXXXXXXXXXEIRAAHFEESMKYARRSVSDADIRKYQA 299 AI +P EI+A HFEESMKYARRSVSDADIRKYQA Sbjct: 702 AIRENIEKDIEKERKRAESP-EAMEEDEEEIAEIKAGHFEESMKYARRSVSDADIRKYQA 760 Query: 298 FAQTLQQSRGFGSEFRFPDQP 236 FAQTLQQSRGFGSEFRFPD P Sbjct: 761 FAQTLQQSRGFGSEFRFPDAP 781 Score = 43.1 bits (100), Expect = 7e-04 Identities = 21/62 (33%), Positives = 34/62 (54%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSGADITEICQRACKY 479 R D+ I I +PD R ++ + + LA+D+DL ++K T G+ GAD+ +C A Sbjct: 366 RFDREIDIGVPDEIGRLEVLRIHTKNMKLAEDVDLERVSKDTHGYVGADLAALCTEAALQ 425 Query: 478 AI 473 I Sbjct: 426 CI 427
>CDC48_SOYBN (P54774) Cell division cycle protein 48 homolog (Valosin-containing| protein homolog) (VCP) Length = 807 Score = 191 bits (486), Expect = 1e-48 Identities = 101/140 (72%), Positives = 109/140 (77%), Gaps = 1/140 (0%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSGADITEICQRACKY 479 RLDQLIYIPLPD DSRHQIFKACLRKSP+AK++DL ALA++TQGFSGADITEICQRACKY Sbjct: 642 RLDQLIYIPLPDEDSRHQIFKACLRKSPIAKNVDLRALARHTQGFSGADITEICQRACKY 701 Query: 478 AIXXXXXXXXXXXXXXXXNP-XXXXXXXXXXXXEIRAAHFEESMKYARRSVSDADIRKYQ 302 AI NP EI+AAHFEESMK+ARRSVSDADIRKYQ Sbjct: 702 AIRENIEKDIERERKSRENPEAMDEDTVDDEVAEIKAAHFEESMKFARRSVSDADIRKYQ 761 Query: 301 AFAQTLQQSRGFGSEFRFPD 242 AFAQTLQQSRGFGSEFRFP+ Sbjct: 762 AFAQTLQQSRGFGSEFRFPE 781 Score = 42.7 bits (99), Expect = 0.001 Identities = 21/62 (33%), Positives = 33/62 (53%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSGADITEICQRACKY 479 R D+ I I +PD R ++ + + L+ D+DL +AK T G+ GAD+ +C A Sbjct: 366 RFDREIDIGVPDEVGRLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQ 425 Query: 478 AI 473 I Sbjct: 426 CI 427
>CDC48_CAPAN (Q96372) Cell division cycle protein 48 homolog| Length = 805 Score = 190 bits (482), Expect = 4e-48 Identities = 102/139 (73%), Positives = 107/139 (76%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSGADITEICQRACKY 479 RLDQLIYIPLPD DSRHQIFKACLRKSPL+KDIDL ALAK+TQGFSGAD+TEICQRACKY Sbjct: 642 RLDQLIYIPLPDEDSRHQIFKACLRKSPLSKDIDLRALAKHTQGFSGADVTEICQRACKY 701 Query: 478 AIXXXXXXXXXXXXXXXXNPXXXXXXXXXXXXEIRAAHFEESMKYARRSVSDADIRKYQA 299 AI NP EI+ AHFEESMKYARRSVSDADIRKYQA Sbjct: 702 AIRENIEKDIEREKRRQENP-DSMDEDVDEVPEIKPAHFEESMKYARRSVSDADIRKYQA 760 Query: 298 FAQTLQQSRGFGSEFRFPD 242 FAQTLQQSRGFG+EFRF D Sbjct: 761 FAQTLQQSRGFGTEFRFAD 779 Score = 40.4 bits (93), Expect = 0.005 Identities = 20/62 (32%), Positives = 33/62 (53%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSGADITEICQRACKY 479 R D+ I I +PD R ++ + LA+++DL ++K T G+ GAD+ +C A Sbjct: 366 RFDREIDIGVPDEVGRLEVLGIHTKNMKLAEEVDLERISKDTHGYVGADLAALCTEAALQ 425 Query: 478 AI 473 I Sbjct: 426 CI 427
>CD48A_ARATH (P54609) Cell division control protein 48 homolog A (AtCDC48a)| Length = 809 Score = 189 bits (479), Expect = 8e-48 Identities = 100/137 (72%), Positives = 104/137 (75%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSGADITEICQRACKY 479 RLDQLIYIPLPD DSR IFKA LRKSP+AKD+D+ ALAKYTQGFSGADITEICQRACKY Sbjct: 642 RLDQLIYIPLPDEDSRLNIFKAALRKSPIAKDVDIGALAKYTQGFSGADITEICQRACKY 701 Query: 478 AIXXXXXXXXXXXXXXXXNPXXXXXXXXXXXXEIRAAHFEESMKYARRSVSDADIRKYQA 299 AI NP EI+AAHFEESMKYARRSVSDADIRKYQA Sbjct: 702 AIRENIEKDIEKEKRRSENPEAMEEDGVDEVSEIKAAHFEESMKYARRSVSDADIRKYQA 761 Query: 298 FAQTLQQSRGFGSEFRF 248 FAQTLQQSRGFGSEFRF Sbjct: 762 FAQTLQQSRGFGSEFRF 778 Score = 43.5 bits (101), Expect = 6e-04 Identities = 21/62 (33%), Positives = 34/62 (54%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSGADITEICQRACKY 479 R D+ I I +PD R ++ + + LA+D+DL ++K T G+ GAD+ +C A Sbjct: 365 RFDREIDIGVPDEIGRLEVLRIHTKNMKLAEDVDLERISKDTHGYVGADLAALCTEAALQ 424 Query: 478 AI 473 I Sbjct: 425 CI 426
>CD48E_ARATH (Q9LZF6) Cell division control protein 48 homolog E (AtCDC48e)| (Transitional endoplasmic reticulum ATPase E) Length = 810 Score = 188 bits (478), Expect = 1e-47 Identities = 102/138 (73%), Positives = 106/138 (76%), Gaps = 1/138 (0%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSGADITEICQRACKY 479 RLDQLIYIPLPD DSR IFKACLRKSP+AKD+D++ALAKYTQGFSGADITEICQRACKY Sbjct: 641 RLDQLIYIPLPDEDSRLNIFKACLRKSPVAKDVDVTALAKYTQGFSGADITEICQRACKY 700 Query: 478 AIXXXXXXXXXXXXXXXXNP-XXXXXXXXXXXXEIRAAHFEESMKYARRSVSDADIRKYQ 302 AI NP EIRAAHFEESMKYARRSVSDADIRKYQ Sbjct: 701 AIRENIEKDIENERRRSQNPEAMEEDMVDDEVSEIRAAHFEESMKYARRSVSDADIRKYQ 760 Query: 301 AFAQTLQQSRGFGSEFRF 248 AFAQTLQQSRGFGSEFRF Sbjct: 761 AFAQTLQQSRGFGSEFRF 778 Score = 43.5 bits (101), Expect = 6e-04 Identities = 21/62 (33%), Positives = 34/62 (54%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSGADITEICQRACKY 479 R D+ I I +PD R ++ + + LA+D+DL ++K T G+ GAD+ +C A Sbjct: 365 RFDREIDIGVPDEIGRLEVLRIHTKNMKLAEDVDLERISKDTHGYVGADLAALCTEAALQ 424 Query: 478 AI 473 I Sbjct: 425 CI 426
>TERA_RAT (P46462) Transitional endoplasmic reticulum ATPase (TER ATPase) (15S| Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP) Length = 805 Score = 155 bits (392), Expect = 1e-37 Identities = 87/138 (63%), Positives = 94/138 (68%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSGADITEICQRACKY 479 RLDQLIYIPLPD SR I KA LRKSP+AKD+DL LAK T GFSGAD+TEICQRACK Sbjct: 637 RLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKL 696 Query: 478 AIXXXXXXXXXXXXXXXXNPXXXXXXXXXXXXEIRAAHFEESMKYARRSVSDADIRKYQA 299 AI NP EIR HFEE+M++ARRSVSD DIRKY+ Sbjct: 697 AIRESIESEIRRERERQTNPSAMEVEEDDPVPEIRRDHFEEAMRFARRSVSDNDIRKYEM 756 Query: 298 FAQTLQQSRGFGSEFRFP 245 FAQTLQQSRGFGS FRFP Sbjct: 757 FAQTLQQSRGFGS-FRFP 773 Score = 43.9 bits (102), Expect = 4e-04 Identities = 22/62 (35%), Positives = 32/62 (51%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSGADITEICQRACKY 479 R D+ + I +PD R +I + + LA D+DL +A T G GAD+ +C A Sbjct: 361 RFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQ 420 Query: 478 AI 473 AI Sbjct: 421 AI 422
>TERA_PIG (P03974) Transitional endoplasmic reticulum ATPase (TER ATPase) (15S| Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP) Length = 805 Score = 155 bits (392), Expect = 1e-37 Identities = 87/138 (63%), Positives = 94/138 (68%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSGADITEICQRACKY 479 RLDQLIYIPLPD SR I KA LRKSP+AKD+DL LAK T GFSGAD+TEICQRACK Sbjct: 637 RLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKL 696 Query: 478 AIXXXXXXXXXXXXXXXXNPXXXXXXXXXXXXEIRAAHFEESMKYARRSVSDADIRKYQA 299 AI NP EIR HFEE+M++ARRSVSD DIRKY+ Sbjct: 697 AIRESIESEIRRERERQTNPSAMEVEEDDPVPEIRRDHFEEAMRFARRSVSDNDIRKYEM 756 Query: 298 FAQTLQQSRGFGSEFRFP 245 FAQTLQQSRGFGS FRFP Sbjct: 757 FAQTLQQSRGFGS-FRFP 773 Score = 43.9 bits (102), Expect = 4e-04 Identities = 22/62 (35%), Positives = 32/62 (51%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSGADITEICQRACKY 479 R D+ + I +PD R +I + + LA D+DL +A T G GAD+ +C A Sbjct: 361 RFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQ 420 Query: 478 AI 473 AI Sbjct: 421 AI 422
>TERA_MOUSE (Q01853) Transitional endoplasmic reticulum ATPase (TER ATPase) (15S| Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP) Length = 805 Score = 155 bits (392), Expect = 1e-37 Identities = 87/138 (63%), Positives = 94/138 (68%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSGADITEICQRACKY 479 RLDQLIYIPLPD SR I KA LRKSP+AKD+DL LAK T GFSGAD+TEICQRACK Sbjct: 637 RLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKL 696 Query: 478 AIXXXXXXXXXXXXXXXXNPXXXXXXXXXXXXEIRAAHFEESMKYARRSVSDADIRKYQA 299 AI NP EIR HFEE+M++ARRSVSD DIRKY+ Sbjct: 697 AIRESIESEIRRERERQTNPSAMEVEEDDPVPEIRRDHFEEAMRFARRSVSDNDIRKYEM 756 Query: 298 FAQTLQQSRGFGSEFRFP 245 FAQTLQQSRGFGS FRFP Sbjct: 757 FAQTLQQSRGFGS-FRFP 773 Score = 43.9 bits (102), Expect = 4e-04 Identities = 22/62 (35%), Positives = 32/62 (51%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSGADITEICQRACKY 479 R D+ + I +PD R +I + + LA D+DL +A T G GAD+ +C A Sbjct: 361 RFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQ 420 Query: 478 AI 473 AI Sbjct: 421 AI 422
>TERA_HUMAN (P55072) Transitional endoplasmic reticulum ATPase (TER ATPase) (15S| Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP) Length = 805 Score = 155 bits (392), Expect = 1e-37 Identities = 87/138 (63%), Positives = 94/138 (68%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSGADITEICQRACKY 479 RLDQLIYIPLPD SR I KA LRKSP+AKD+DL LAK T GFSGAD+TEICQRACK Sbjct: 637 RLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKL 696 Query: 478 AIXXXXXXXXXXXXXXXXNPXXXXXXXXXXXXEIRAAHFEESMKYARRSVSDADIRKYQA 299 AI NP EIR HFEE+M++ARRSVSD DIRKY+ Sbjct: 697 AIRESIESEIRRERERQTNPSAMEVEEDDPVPEIRRDHFEEAMRFARRSVSDNDIRKYEM 756 Query: 298 FAQTLQQSRGFGSEFRFP 245 FAQTLQQSRGFGS FRFP Sbjct: 757 FAQTLQQSRGFGS-FRFP 773 Score = 43.9 bits (102), Expect = 4e-04 Identities = 22/62 (35%), Positives = 32/62 (51%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSGADITEICQRACKY 479 R D+ + I +PD R +I + + LA D+DL +A T G GAD+ +C A Sbjct: 361 RFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQ 420 Query: 478 AI 473 AI Sbjct: 421 AI 422
>TERA1_CAEEL (P54811) Transitional endoplasmic reticulum ATPase homolog 1| (p97/CDC48 homolog 1) Length = 809 Score = 154 bits (388), Expect = 3e-37 Identities = 83/144 (57%), Positives = 96/144 (66%), Gaps = 4/144 (2%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSGADITEICQRACKY 479 RLDQLIYIPLPD SRHQI KA LRK+PL+KD+DL+ LAK T GFSGAD+TEICQRACK Sbjct: 645 RLDQLIYIPLPDEASRHQILKASLRKTPLSKDLDLTFLAKNTVGFSGADLTEICQRACKL 704 Query: 478 AIXXXXXXXXXXXXXXXXNPXXXXXXXXXXXXE----IRAAHFEESMKYARRSVSDADIR 311 AI + I AHFEE+MK+ARRSV+D DIR Sbjct: 705 AIRESIEKEIRIEKERQDRQARGEELMEDDAVDPVPEITRAHFEEAMKFARRSVTDNDIR 764 Query: 310 KYQAFAQTLQQSRGFGSEFRFPDQ 239 KY+ FAQTLQQSRGFG+ F+FP + Sbjct: 765 KYEMFAQTLQQSRGFGNNFKFPGE 788 Score = 43.1 bits (100), Expect = 7e-04 Identities = 21/57 (36%), Positives = 30/57 (52%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSGADITEICQRA 488 R D+ I I +PD R +I + + LA D+DL +A GF GAD+ +C A Sbjct: 368 RFDREIDIGIPDAVGRLEILRIHTKNMKLADDVDLEQIANECHGFVGADLASLCSEA 424
>TERA_XENLA (P23787) Transitional endoplasmic reticulum ATPase (TER ATPase) (15S| Mg(2+)-ATPase p97 subunit) Length = 805 Score = 152 bits (385), Expect = 6e-37 Identities = 86/138 (62%), Positives = 93/138 (67%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSGADITEICQRACKY 479 RLDQLIYIPLPD SR I KA LRKSP+AKD+D+ LAK T GFSGAD+TEICQRACK Sbjct: 638 RLDQLIYIPLPDEKSRMAILKANLRKSPVAKDVDVDFLAKMTNGFSGADLTEICQRACKL 697 Query: 478 AIXXXXXXXXXXXXXXXXNPXXXXXXXXXXXXEIRAAHFEESMKYARRSVSDADIRKYQA 299 AI NP EIR HFEE+M+ ARRSVSD DIRKY+ Sbjct: 698 AIRESIENEIRRERDRQTNPSAMEVEEDDPVPEIRRDHFEEAMRLARRSVSDNDIRKYEM 757 Query: 298 FAQTLQQSRGFGSEFRFP 245 FAQTLQQSRGFGS FRFP Sbjct: 758 FAQTLQQSRGFGS-FRFP 774 Score = 42.0 bits (97), Expect = 0.002 Identities = 21/62 (33%), Positives = 32/62 (51%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSGADITEICQRACKY 479 R D+ + I +PD R +I + + L+ D+DL +A T G GAD+ +C A Sbjct: 362 RFDREVDIGIPDSTGRLEILQIHTKNMKLSDDVDLEQVANETHGHVGADLAALCSEAALQ 421 Query: 478 AI 473 AI Sbjct: 422 AI 423
>TERA2_CAEEL (P54812) Transitional endoplasmic reticulum ATPase homolog 2| (p97/CDC48 homolog 2) Length = 810 Score = 149 bits (377), Expect = 5e-36 Identities = 82/144 (56%), Positives = 95/144 (65%), Gaps = 4/144 (2%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSGADITEICQRACKY 479 RLDQLIYIPLPD SR QIFKA LRK+PL+ D+DL+ LAK T GFSGAD+TEICQRACK Sbjct: 643 RLDQLIYIPLPDEASRLQIFKASLRKTPLSADLDLNFLAKNTVGFSGADLTEICQRACKL 702 Query: 478 AIXXXXXXXXXXXXXXXXNPXXXXXXXXXXXXE----IRAAHFEESMKYARRSVSDADIR 311 AI + I AHFEE+MK+ARRSV+D DIR Sbjct: 703 AIRESIEREIRQEKERQDRSARGEELMEDELADPVPEITRAHFEEAMKFARRSVTDNDIR 762 Query: 310 KYQAFAQTLQQSRGFGSEFRFPDQ 239 KY+ FAQTLQQSRGFG+ F+FP + Sbjct: 763 KYEMFAQTLQQSRGFGNNFKFPGE 786 Score = 42.0 bits (97), Expect = 0.002 Identities = 20/57 (35%), Positives = 30/57 (52%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSGADITEICQRA 488 R D+ I I +PD R +I + + L +D+DL +A GF GAD+ +C A Sbjct: 367 RFDREIDIGIPDAVGRLEILRIHTKNMKLGEDVDLEQVANECHGFVGADLASLCSEA 423
>CDC48_YEAST (P25694) Cell division control protein 48| Length = 835 Score = 109 bits (272), Expect = 8e-24 Identities = 64/153 (41%), Positives = 83/153 (54%), Gaps = 12/153 (7%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSGADITEICQRACKY 479 RLDQLIY+PLPD ++R I A LRK+PL ++L+A+AK TQGFSGAD+ I QRA KY Sbjct: 648 RLDQLIYVPLPDENARLSILNAQLRKTPLEPGLELTAIAKATQGFSGADLLYIVQRAAKY 707 Query: 478 AIXXXXXXXXXXXXXXXXNPXXXXXXXXXXXX------------EIRAAHFEESMKYARR 335 AI I HF E+MK A+R Sbjct: 708 AIKDSIEAHRQHEAEKEVKVEGEDVEMTDEGAKAEQEPEVDPVPYITKEHFAEAMKTAKR 767 Query: 334 SVSDADIRKYQAFAQTLQQSRGFGSEFRFPDQP 236 SVSDA++R+Y+A++Q ++ SRG S F F D P Sbjct: 768 SVSDAELRRYEAYSQQMKASRGQFSNFNFNDAP 800 Score = 47.8 bits (112), Expect = 3e-05 Identities = 23/62 (37%), Positives = 33/62 (53%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSGADITEICQRACKY 479 R D+ + I +PD R ++ + + LA D+DL ALA T G+ GADI +C A Sbjct: 372 RFDREVDIGIPDATGRLEVLRIHTKNMKLADDVDLEALAAETHGYVGADIASLCSEAAMQ 431 Query: 478 AI 473 I Sbjct: 432 QI 433
>CDC48_SCHPO (Q9P3A7) Cell division cycle protein 48| Length = 815 Score = 107 bits (267), Expect = 3e-23 Identities = 61/141 (43%), Positives = 82/141 (58%), Gaps = 2/141 (1%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSGADITEICQRACKY 479 RLDQLIY+PLPD ++R I + LR +P+A+D+DL A+AK T GFSGAD+ + QRA K Sbjct: 657 RLDQLIYVPLPDEEARFSILQTQLRHTPVAEDVDLRAVAKATHGFSGADLEFVVQRAVKL 716 Query: 478 AIXXXXXXXXXXXXXXXXNPX-XXXXXXXXXXXEIRAAHFEESMKYARRSVSDADIRKYQ 302 AI P +++ H EE+MK ARRSVSDA++R+Y+ Sbjct: 717 AIKDSIEEDIKRENETGEAPADDVVMDEDASVSQVQRHHVEEAMKMARRSVSDAEVRRYE 776 Query: 301 AFAQTLQQSRGF-GSEFRFPD 242 A+A L SRG G +F D Sbjct: 777 AYAHQLLTSRGLTGFQFDSAD 797 Score = 42.4 bits (98), Expect = 0.001 Identities = 19/62 (30%), Positives = 32/62 (51%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSGADITEICQRACKY 479 R D+ + + +PD R +I + + LA D+DL +A T G+ G+D+ +C A Sbjct: 382 RFDREVDVGIPDPTGRLEILRIHTKNMKLADDVDLEQIAAETHGYVGSDLASLCSEAAMQ 441 Query: 478 AI 473 I Sbjct: 442 QI 443
>CDAT_PLAF7 (P46468) Putative cell division cycle ATPase| Length = 1229 Score = 82.8 bits (203), Expect = 8e-16 Identities = 48/132 (36%), Positives = 66/132 (50%), Gaps = 7/132 (5%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSGADITEICQRACKY 479 RLD+LIYI LPD+ SR+ IFKA L+ +PL +D+D+ +AK T+GFSGADIT +CQ A Sbjct: 1093 RLDKLIYISLPDLKSRYSIFKAILKNTPLNEDVDIHDMAKRTEGFSGADITNLCQSAVNE 1152 Query: 478 AIXXXXXXXXXXXXXXXXNPXXXXXXXXXXXX-------EIRAAHFEESMKYARRSVSDA 320 AI + HF+ + K AR S+ Sbjct: 1153 AIKETIHLLNIRKKEQEEQRKKNKNSFKIDDTDTYDPVPTLSKKHFDLAFKNARISIQPE 1212 Query: 319 DIRKYQAFAQTL 284 D+ KY+ F + L Sbjct: 1213 DVLKYEKFKEKL 1224 Score = 45.4 bits (106), Expect = 1e-04 Identities = 21/57 (36%), Positives = 33/57 (57%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSGADITEICQRA 488 R D+ I IP+PD R++I +K L D++L +AK G+ GAD+ ++C A Sbjct: 685 RFDREIEIPVPDEQGRYEILLTKTKKMKLDPDVNLRKIAKECHGYVGADLAQLCFEA 741
>Y1297_ARCFU (O28972) Cell division cycle protein 48 homolog AF1297| Length = 733 Score = 71.2 bits (173), Expect = 2e-12 Identities = 42/119 (35%), Positives = 61/119 (51%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSGADITEICQRACKY 479 RL++ IYIP PD +R +IFK LR PLA D+++ LA+ T+G+SGADI +C+ A Sbjct: 614 RLERHIYIPPPDKKARVEIFKIHLRGKPLADDVNIEELAEKTEGYSGADIEAVCREAGML 673 Query: 478 AIXXXXXXXXXXXXXXXXNPXXXXXXXXXXXXEIRAAHFEESMKYARRSVSDADIRKYQ 302 AI +I HFEE++K R S++ D+ KY+ Sbjct: 674 AIRELIKPGM----------TREEAKEAAKKLKITKKHFEEALKKVRPSLTKEDVEKYE 722 Score = 57.8 bits (138), Expect = 3e-08 Identities = 27/62 (43%), Positives = 40/62 (64%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSGADITEICQRACKY 479 R D+ I I +PD + R +I + RK PLA+D+DL LA+ T GF GAD+ +C+ A + Sbjct: 340 RFDREIEIGVPDKEGRKEILEIHTRKMPLAEDVDLEELAELTNGFVGADLEALCKEAAMH 399 Query: 478 AI 473 A+ Sbjct: 400 AL 401
>CD48C_ARATH (Q9SS94) Cell division control protein 48 homolog C (AtCDC48c)| Length = 820 Score = 67.4 bits (163), Expect = 4e-11 Identities = 41/135 (30%), Positives = 61/135 (45%), Gaps = 1/135 (0%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYT-QGFSGADITEICQRACK 482 R L+Y+PLP+ D R I KA RK P+ +DL +AK +GFSGAD+ + Q+A Sbjct: 685 RFGNLLYVPLPNADERASILKAIARKKPIDPSVDLDGIAKNNCEGFSGADLAHLVQKATF 744 Query: 481 YAIXXXXXXXXXXXXXXXXNPXXXXXXXXXXXXEIRAAHFEESMKYARRSVSDADIRKYQ 302 A+ + I+ HFE+++ SV+ R Y Sbjct: 745 QAV----------EEMIGSSESSEDDVTDITQCTIKTRHFEQALSLVSPSVNKQQRRHYD 794 Query: 301 AFAQTLQQSRGFGSE 257 A + LQ+S G +E Sbjct: 795 ALSTKLQESVGRNTE 809 Score = 36.2 bits (82), Expect = 0.088 Identities = 20/62 (32%), Positives = 30/62 (48%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSGADITEICQRACKY 479 R + I + PD D+R +I +K L D +A+ T GF GAD+ + A + Sbjct: 401 RFETEIALTAPDEDARAEILSVVAQKLRLEGPFDKKRIARLTPGFVGADLESVAYLAGRK 460 Query: 478 AI 473 AI Sbjct: 461 AI 462
>KTNA1_STRPU (O61577) Katanin p60 ATPase-containing subunit (EC 3.6.4.3)| (Katanin p60 subunit) (p60 katanin) Length = 516 Score = 67.4 bits (163), Expect = 4e-11 Identities = 30/62 (48%), Positives = 45/62 (72%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSGADITEICQRACKY 479 RL++ IYIPLP++D R Q+ + L++ PLA DIDL ++A+ G+SGADIT +C+ A Sbjct: 397 RLEKRIYIPLPEIDGREQLLRINLKEVPLADDIDLKSIAEKMDGYSGADITNVCRDASMM 456 Query: 478 AI 473 A+ Sbjct: 457 AM 458
>KTNA1_HUMAN (O75449) Katanin p60 ATPase-containing subunit A1 (EC 3.6.4.3)| (Katanin p60 subunit A1) (p60 katanin) Length = 491 Score = 63.2 bits (152), Expect = 7e-10 Identities = 37/119 (31%), Positives = 58/119 (48%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSGADITEICQRACKY 479 RL++ IYIPLP R ++ + LR+ LA D+DL+++A+ +G+SGADIT +C+ A Sbjct: 372 RLEKRIYIPLPSAKGREELLRISLRELELADDVDLASIAENMEGYSGADITNVCRDASLM 431 Query: 478 AIXXXXXXXXXXXXXXXXNPXXXXXXXXXXXXEIRAAHFEESMKYARRSVSDADIRKYQ 302 A+ FE ++K +SVS ADI +Y+ Sbjct: 432 AMRRRIEGLTPEEIRNLSKEEMHMPTT--------MEDFEMALKKVSKSVSAADIERYE 482
>PSMR_ARCFU (O28303) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 398 Score = 62.4 bits (150), Expect = 1e-09 Identities = 31/62 (50%), Positives = 40/62 (64%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSGADITEICQRACKY 479 R D++I +PLP + R QIFK RK LA+D+D LA+ T+G SGADI IC A + Sbjct: 302 RFDRIIEVPLPTFEGRIQIFKIHTRKMKLAEDVDFKELARITEGASGADIKAICTEAGMF 361 Query: 478 AI 473 AI Sbjct: 362 AI 363
>PSMR_METKA (Q8TX03) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 436 Score = 62.4 bits (150), Expect = 1e-09 Identities = 33/62 (53%), Positives = 40/62 (64%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSGADITEICQRACKY 479 R D+ I IPLPD + R++IFK R LA+D+DL LAK T+G SGADI IC A Sbjct: 340 RFDRHIKIPLPDEEGRYEIFKIHTRDMNLAEDVDLQKLAKITEGASGADIKAICTEAGMM 399 Query: 478 AI 473 AI Sbjct: 400 AI 401
>KTNA1_RAT (Q6E0V2) Katanin p60 ATPase-containing subunit A1 (EC 3.6.4.3)| (Katanin p60 subunit A1) (p60 katanin) Length = 491 Score = 61.2 bits (147), Expect = 3e-09 Identities = 36/119 (30%), Positives = 58/119 (48%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSGADITEICQRACKY 479 RL++ IYIPLP R ++ + LR+ LA D++L+++A+ +G+SGADIT +C+ A Sbjct: 372 RLEKRIYIPLPSAKGREELLRISLRELELADDVNLASIAENMEGYSGADITNVCRDASLM 431 Query: 478 AIXXXXXXXXXXXXXXXXNPXXXXXXXXXXXXEIRAAHFEESMKYARRSVSDADIRKYQ 302 A+ FE ++K +SVS ADI +Y+ Sbjct: 432 AMRRRIEGLTPEEIRNLSREEMHMPTT--------MEDFEMALKKVSKSVSAADIERYE 482
>KTNA1_MOUSE (Q9WV86) Katanin p60 ATPase-containing subunit A1 (EC 3.6.4.3)| (Katanin p60 subunit A1) (p60 katanin) (Lipotransin) Length = 491 Score = 61.2 bits (147), Expect = 3e-09 Identities = 36/119 (30%), Positives = 58/119 (48%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSGADITEICQRACKY 479 RL++ IYIPLP R ++ + LR+ LA D++L+++A+ +G+SGADIT +C+ A Sbjct: 372 RLEKRIYIPLPSAKGREELLRISLRELELADDVNLASIAENMEGYSGADITNVCRDASLM 431 Query: 478 AIXXXXXXXXXXXXXXXXNPXXXXXXXXXXXXEIRAAHFEESMKYARRSVSDADIRKYQ 302 A+ FE ++K +SVS ADI +Y+ Sbjct: 432 AMRRRIEGLTPEEIRNLSREAMHMPTT--------MEDFEMALKKISKSVSAADIERYE 482
>Y1156_METJA (Q58556) Cell division cycle protein 48 homolog MJ1156| Length = 903 Score = 60.5 bits (145), Expect = 4e-09 Identities = 28/62 (45%), Positives = 42/62 (67%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSGADITEICQRACKY 479 RLD++I +P+PD +R IFK R LA+D++L LAK T+G++GADI +C+ A Sbjct: 611 RLDRVILVPVPDEKARLDIFKIHTRSMNLAEDVNLEELAKKTEGYTGADIEALCREAAML 670 Query: 478 AI 473 A+ Sbjct: 671 AV 672 Score = 53.5 bits (127), Expect = 5e-07 Identities = 26/62 (41%), Positives = 37/62 (59%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSGADITEICQRACKY 479 R D+ I I +PD + R +I + R PLA+D+DL LA T GF GAD+ +C+ A Sbjct: 337 RFDREIVIGVPDREGRKEILQIHTRNMPLAEDVDLDYLADVTHGFVGADLAALCKEAAMR 396 Query: 478 AI 473 A+ Sbjct: 397 AL 398
>VAT_THEAC (O05209) VCP-like ATPase| Length = 745 Score = 60.1 bits (144), Expect = 6e-09 Identities = 36/128 (28%), Positives = 61/128 (47%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSGADITEICQRACKY 479 R D+LIYIP PD ++R I K + PLA D+DL+ +A+ T+G+ GAD+ +C+ A Sbjct: 626 RFDKLIYIPPPDKEARLSILKVHTKNMPLAPDVDLNDIAQRTEGYVGADLENLCREAGMN 685 Query: 478 AIXXXXXXXXXXXXXXXXNPXXXXXXXXXXXXEIRAAHFEESMKYARRSVSDADIRKYQA 299 A + +F +++K R SV + I+ Y+ Sbjct: 686 A-----------------------YRENPDATSVSQKNFLDALKTIRPSVDEEVIKFYRT 722 Query: 298 FAQTLQQS 275 ++T+ +S Sbjct: 723 LSETMSKS 730
>KATL1_RAT (Q5XIK7) Katanin p60 ATPase-containing subunit A-like 1 (EC| 3.6.4.3) (Katanin p60 subunit A-like 1) (p60 katanin-like 1) Length = 488 Score = 58.5 bits (140), Expect = 2e-08 Identities = 38/119 (31%), Positives = 55/119 (46%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSGADITEICQRACKY 479 RL++ IYIPLP R ++ K LR+ L DI L +A+ T+G+SGADIT IC+ A Sbjct: 369 RLEKRIYIPLPTAKGRAELLKISLREVELDPDIHLEDIAEKTEGYSGADITNICRDASLM 428 Query: 478 AIXXXXXXXXXXXXXXXXNPXXXXXXXXXXXXEIRAAHFEESMKYARRSVSDADIRKYQ 302 A+ + E ++K +SVS AD+ KY+ Sbjct: 429 AM--------RRRINGLSPEEIRALSKEELQMPVTRGDLELALKKIAKSVSAADLEKYE 479
>KTNA1_ARATH (Q9SEX2) Katanin p60 ATPase-containing subunit (EC 3.6.4.3)| (Katanin p60 subunit) (p60 katanin) (Atp60) (CAD ATPase) (Katanin 1) (BOTERO1 protein) (ECTOPIC ROOT HAIR 3 protein) (FAT ROOT protein) (FRAGILE FIBER 2 protein) (AtAAA1) Length = 523 Score = 58.2 bits (139), Expect = 2e-08 Identities = 33/119 (27%), Positives = 58/119 (48%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSGADITEICQRACKY 479 RL++ IYIPLPD +SR + LR +A D+++ +A+ T+G+SG D+T +C+ A Sbjct: 403 RLEKRIYIPLPDFESRKALININLRTVEVASDVNIEDVARRTEGYSGDDLTNVCRDASMN 462 Query: 478 AIXXXXXXXXXXXXXXXXNPXXXXXXXXXXXXEIRAAHFEESMKYARRSVSDADIRKYQ 302 + + + FEE+++ + SVS +DI K++ Sbjct: 463 GM-------RRKIAGKTRDEIKNMSKDDISNDPVAMCDFEEAIRKVQPSVSSSDIEKHE 514
>KATL1_HUMAN (Q9BW62) Katanin p60 ATPase-containing subunit A-like 1 (EC| 3.6.4.3) (Katanin p60 subunit A-like 1) (p60 katanin-like 1) Length = 490 Score = 57.8 bits (138), Expect = 3e-08 Identities = 37/119 (31%), Positives = 55/119 (46%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSGADITEICQRACKY 479 RL++ IYIPLP R ++ K LR+ L DI L +A+ +G+SGADIT +C+ A Sbjct: 371 RLEKRIYIPLPTAKGRAELLKINLREVELDPDIQLEDIAEKIEGYSGADITNVCRDASLM 430 Query: 478 AIXXXXXXXXXXXXXXXXNPXXXXXXXXXXXXEIRAAHFEESMKYARRSVSDADIRKYQ 302 A+ + FE ++K +SVS AD+ KY+ Sbjct: 431 AM--------RRRINGLSPEEIRALSKEELQMPVTKGDFELALKKIAKSVSAADLEKYE 481
>FTSH_BUCAI (P57462) Cell division protein ftsH (EC 3.4.24.-)| Length = 611 Score = 57.8 bits (138), Expect = 3e-08 Identities = 26/61 (42%), Positives = 38/61 (62%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSGADITEICQRACKY 479 R D+ + + LPD+ R QI K +RK PL+KD+D +A+ T GFSGAD+ + A + Sbjct: 312 RFDRQVIVALPDIRGREQILKVHMRKVPLSKDVDPMIIARGTPGFSGADLANLVNEAALF 371 Query: 478 A 476 A Sbjct: 372 A 372
>PSMR_SULSO (Q980M1) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 393 Score = 57.4 bits (137), Expect = 4e-08 Identities = 27/62 (43%), Positives = 39/62 (62%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSGADITEICQRACKY 479 R D++I +PLPD R +IF L+K + +I+L L++ T+GFSGADI +C A Sbjct: 295 RFDRIIEVPLPDFKGRTEIFNIYLKKMKIEDNINLELLSQLTEGFSGADIKNVCVEAAYM 354 Query: 478 AI 473 AI Sbjct: 355 AI 356
>PSMR_METMA (Q8PY58) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 420 Score = 57.4 bits (137), Expect = 4e-08 Identities = 26/62 (41%), Positives = 40/62 (64%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSGADITEICQRACKY 479 R D+L+++P+P +++R +I K K LA+DID LAK T+G SGAD+ I A + Sbjct: 320 RFDRLVHVPMPGIEARGKILKIHCEKMTLAEDIDFKKLAKATEGMSGADLKAIATEAGMF 379 Query: 478 AI 473 A+ Sbjct: 380 AV 381
>KATL1_MOUSE (Q8K0T4) Katanin p60 ATPase-containing subunit A-like 1 (EC| 3.6.4.3) (Katanin p60 subunit A-like 1) (p60 katanin-like 1) Length = 488 Score = 57.4 bits (137), Expect = 4e-08 Identities = 37/119 (31%), Positives = 54/119 (45%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSGADITEICQRACKY 479 RL++ IYIPLP R ++ K LR+ L D+ L +A T+G+SGADIT IC+ A Sbjct: 369 RLEKRIYIPLPTAKGRAELLKISLREVELDPDVHLEDIADKTEGYSGADITNICRDASLM 428 Query: 478 AIXXXXXXXXXXXXXXXXNPXXXXXXXXXXXXEIRAAHFEESMKYARRSVSDADIRKYQ 302 A+ + E ++K +SVS AD+ KY+ Sbjct: 429 AM--------RRRINGLSPEEIRALSKEELQMPVTRGDLELALKKIAKSVSAADLEKYE 479
>FTSH_SHIFL (P0AAI4) Cell division protein ftsH (EC 3.4.24.-)| Length = 644 Score = 57.4 bits (137), Expect = 4e-08 Identities = 27/61 (44%), Positives = 38/61 (62%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSGADITEICQRACKY 479 R D+ + + LPDV R QI K +R+ PLA DID + +A+ T GFSGAD+ + A + Sbjct: 312 RFDRQVVVGLPDVRGREQILKVHMRRVPLAPDIDAAIIARGTPGFSGADLANLVNEAALF 371 Query: 478 A 476 A Sbjct: 372 A 372
>FTSH_SALTY (P63343) Cell division protease ftsH (EC 3.4.24.-)| Length = 644 Score = 57.4 bits (137), Expect = 4e-08 Identities = 27/61 (44%), Positives = 38/61 (62%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSGADITEICQRACKY 479 R D+ + + LPDV R QI K +R+ PLA DID + +A+ T GFSGAD+ + A + Sbjct: 312 RFDRQVVVGLPDVRGREQILKVHMRRVPLATDIDAAIIARGTPGFSGADLANLVNEAALF 371 Query: 478 A 476 A Sbjct: 372 A 372
>FTSH_SALTI (P63344) Cell division protease ftsH (EC 3.4.24.-)| Length = 644 Score = 57.4 bits (137), Expect = 4e-08 Identities = 27/61 (44%), Positives = 38/61 (62%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSGADITEICQRACKY 479 R D+ + + LPDV R QI K +R+ PLA DID + +A+ T GFSGAD+ + A + Sbjct: 312 RFDRQVVVGLPDVRGREQILKVHMRRVPLATDIDAAIIARGTPGFSGADLANLVNEAALF 371 Query: 478 A 476 A Sbjct: 372 A 372
>FTSH_ECOLI (P0AAI3) Cell division protein ftsH (EC 3.4.24.-)| Length = 644 Score = 57.4 bits (137), Expect = 4e-08 Identities = 27/61 (44%), Positives = 38/61 (62%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSGADITEICQRACKY 479 R D+ + + LPDV R QI K +R+ PLA DID + +A+ T GFSGAD+ + A + Sbjct: 312 RFDRQVVVGLPDVRGREQILKVHMRRVPLAPDIDAAIIARGTPGFSGADLANLVNEAALF 371 Query: 478 A 476 A Sbjct: 372 A 372
>FTSH_ECO57 (Q8X9L0) Cell division protease ftsH (EC 3.4.24.-)| Length = 644 Score = 57.4 bits (137), Expect = 4e-08 Identities = 27/61 (44%), Positives = 38/61 (62%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSGADITEICQRACKY 479 R D+ + + LPDV R QI K +R+ PLA DID + +A+ T GFSGAD+ + A + Sbjct: 312 RFDRQVVVGLPDVRGREQILKVHMRRVPLAPDIDAAIIARGTPGFSGADLANLVNEAALF 371 Query: 478 A 476 A Sbjct: 372 A 372
>KTNA1_XENLA (Q9PUL2) Katanin p60 ATPase-containing subunit (EC 3.6.4.3)| (Katanin p60 subunit) (p60 katanin) (Fragment) Length = 486 Score = 57.0 bits (136), Expect = 5e-08 Identities = 34/119 (28%), Positives = 55/119 (46%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSGADITEICQRACKY 479 RL++ IYIPLP R ++ + L++ LA D+++ +A+ G+SGADIT +C+ A Sbjct: 369 RLEKRIYIPLPSAKGREELLRINLKELELADDVNIECIAENMDGYSGADITNVCRDASLM 428 Query: 478 AIXXXXXXXXXXXXXXXXNPXXXXXXXXXXXXEIRAAHFEESMKYARRSVSDADIRKYQ 302 A+ FE ++K +SVS +DI KY+ Sbjct: 429 AMRRRIEGLTPEEIRNLSRDDMHMPTT--------MEDFEMALKKVSKSVSASDIEKYE 479
>SAV_SULAC (Q07590) SAV protein| Length = 780 Score = 56.6 bits (135), Expect = 6e-08 Identities = 32/133 (24%), Positives = 64/133 (48%), Gaps = 5/133 (3%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSGADITEICQRACKY 479 R D+LIY+P PD +R +I K + PLA+D+ L +A+ +G++GAD+ + + A Sbjct: 646 RFDRLIYVPPPDKTARFEILKVHTKNVPLAEDVSLEDIAEKAEGYTGADLEALVREATIN 705 Query: 478 AIXXXXX-----XXXXXXXXXXXNPXXXXXXXXXXXXEIRAAHFEESMKYARRSVSDADI 314 A+ ++ FE+++ + S++ ADI Sbjct: 706 AMRSIYSMCDKQSRDECKGNMECYQKHIKECMNKTSFKVSKEDFEKALNVVKASLTQADI 765 Query: 313 RKYQAFAQTLQQS 275 ++Y+ F++ L+++ Sbjct: 766 QRYERFSKELKRA 778 Score = 48.1 bits (113), Expect = 2e-05 Identities = 23/62 (37%), Positives = 34/62 (54%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSGADITEICQRACKY 479 R D+ I I PD R I + R P+ D+DL LA+ T G++GAD+ + + A Y Sbjct: 370 RFDREIEIRPPDTKGRKDILQVHTRNMPITDDVDLDKLAEMTYGYTGADLAALAKEAAIY 429 Query: 478 AI 473 A+ Sbjct: 430 AL 431
>FTSH_BUCAP (Q8K9G8) Cell division protein ftsH (EC 3.4.24.-)| Length = 613 Score = 56.2 bits (134), Expect = 8e-08 Identities = 26/61 (42%), Positives = 38/61 (62%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSGADITEICQRACKY 479 R D+ + + LPDV R QI K +RK PL++D+D +A+ T GFSGAD+ + A + Sbjct: 312 RFDRQVIVALPDVRGRKQILKVHMRKVPLSEDVDPMIIARGTPGFSGADLANLVNEAALF 371 Query: 478 A 476 A Sbjct: 372 A 372
>FTSH_AQUAE (O67077) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 634 Score = 56.2 bits (134), Expect = 8e-08 Identities = 27/61 (44%), Positives = 37/61 (60%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSGADITEICQRACKY 479 R D+ I+IP PDV R++I K R LAKD+DL +A+ T GF+GAD+ + A Sbjct: 316 RFDRQIFIPKPDVRGRYEILKVHARNKKLAKDVDLEFVARATPGFTGADLENLLNEAALL 375 Query: 478 A 476 A Sbjct: 376 A 376
>PSMR_METAC (Q8TI88) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 421 Score = 55.8 bits (133), Expect = 1e-07 Identities = 26/62 (41%), Positives = 39/62 (62%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSGADITEICQRACKY 479 R D+L+++P+P +++R +I K K LA DID LAK T+G SGAD+ I A + Sbjct: 320 RFDRLVHVPMPGIEARGKILKIHCGKMTLAGDIDFKKLAKVTEGMSGADLKAIATEAGMF 379 Query: 478 AI 473 A+ Sbjct: 380 AV 381
>PSMR_AERPE (Q9YAC7) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 409 Score = 54.3 bits (129), Expect = 3e-07 Identities = 27/62 (43%), Positives = 39/62 (62%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSGADITEICQRACKY 479 R D++I +PLP + R +I RK+ +A D+DL A+AK T+GFSGAD+ + A Sbjct: 300 RFDRIIEVPLPSLRGRLEILGIHTRKAKMAPDVDLEAIAKLTEGFSGADLKAVVVEAGYN 359 Query: 478 AI 473 AI Sbjct: 360 AI 361
>MEI1_CAEEL (P34808) Meiotic spindle formation protein mei-1 (EC 3.6.4.3)| (Katanin ATPase-containing subunit) Length = 472 Score = 54.3 bits (129), Expect = 3e-07 Identities = 22/57 (38%), Positives = 39/57 (68%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSGADITEICQRA 488 R ++ I+IPLPD+D+R ++ + + +P + +I+ LA T+GFSGAD+ +C+ A Sbjct: 352 RFEKRIFIPLPDIDARKKLIEKSMEGTPKSDEINYDDLAARTEGFSGADVVSLCRTA 408
>FTSH1_HAEIN (P71377) Cell division protein ftsH homolog 1 (EC 3.4.24.-)| Length = 635 Score = 54.3 bits (129), Expect = 3e-07 Identities = 25/61 (40%), Positives = 37/61 (60%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSGADITEICQRACKY 479 R D+ + + LPDV R QI K +RK +A+D+D LA+ T G+SGAD+ + A + Sbjct: 311 RFDRQVVVGLPDVKGREQILKVHMRKVSVAQDVDAMTLARGTPGYSGADLANLVNEAALF 370 Query: 478 A 476 A Sbjct: 371 A 371
>FTSH2_HAEIN (P45219) Cell division protein ftsH homolog 2 (EC 3.4.24.-)| Length = 381 Score = 54.3 bits (129), Expect = 3e-07 Identities = 25/61 (40%), Positives = 37/61 (60%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSGADITEICQRACKY 479 R D+ + + LPDV R QI K +RK +A+D+D LA+ T G+SGAD+ + A + Sbjct: 57 RFDRQVVVGLPDVKGREQILKVHMRKVSVAQDVDAMTLARGTPGYSGADLANLVNEAALF 116 Query: 478 A 476 A Sbjct: 117 A 117
>PSMR_METTH (O26824) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 410 Score = 53.9 bits (128), Expect = 4e-07 Identities = 26/62 (41%), Positives = 37/62 (59%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSGADITEICQRACKY 479 R D+ I +PLP+ D R +I K LA+++D+ LA+ T G SGAD+ IC A + Sbjct: 312 RFDRFIEVPLPNEDGRREILKIHTSGMALAEEVDIELLARITDGASGADLKAICTEAGMF 371 Query: 478 AI 473 AI Sbjct: 372 AI 373
>PSMR_PYRHO (O57940) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 399 Score = 52.0 bits (123), Expect = 2e-06 Identities = 28/62 (45%), Positives = 39/62 (62%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSGADITEICQRACKY 479 R D+LI +PLPD + R +I K R+ L K +DL A+A+ T+G SGAD+ I A + Sbjct: 301 RFDRLIEVPLPDFEGRLEILKVHTRRMKL-KGVDLRAIAEMTEGASGADLKAIATEAGMF 359 Query: 478 AI 473 AI Sbjct: 360 AI 361
>AFG2_YEAST (P32794) Protein AFG2| Length = 780 Score = 51.6 bits (122), Expect = 2e-06 Identities = 35/123 (28%), Positives = 56/123 (45%), Gaps = 1/123 (0%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRHQIFKACLRKSPLAKD-IDLSALAKYTQGFSGADITEICQRACK 482 RLD+ IY+ PDV++R +I K C +K + +DL LA T+G+SGA++ +CQ A Sbjct: 674 RLDRHIYVGPPDVNARLEILKKCTKKFNTEESGVDLHELADRTEGYSGAEVVLLCQEAGL 733 Query: 481 YAIXXXXXXXXXXXXXXXXNPXXXXXXXXXXXXEIRAAHFEESMKYARRSVSDADIRKYQ 302 AI ++ HFE++ K R ++ + Y+ Sbjct: 734 AAI-----------------------MEDLDVAKVELRHFEKAFKGIARGITPEMLSYYE 770 Query: 301 AFA 293 FA Sbjct: 771 EFA 773 Score = 36.6 bits (83), Expect = 0.068 Identities = 23/61 (37%), Positives = 33/61 (54%), Gaps = 4/61 (6%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRHQIF-KACLRKSPLAKDIDLSAL---AKYTQGFSGADITEICQR 491 R DQ + I +PDVD+R I K R S +D A+ A T G+ GAD+T +C+ Sbjct: 404 RFDQEVEIGIPDVDARFDILTKQFSRMSSDRHVLDSEAIKYIASKTHGYVGADLTALCRE 463 Query: 490 A 488 + Sbjct: 464 S 464
>PSMR_SULTO (Q975U2) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 392 Score = 51.6 bits (122), Expect = 2e-06 Identities = 26/62 (41%), Positives = 37/62 (59%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSGADITEICQRACKY 479 R D+LI +PLP+ + R +IF+ L+K +I LA T+GFSGA+I +C A Sbjct: 295 RFDRLIEVPLPNFEGRKEIFRIYLQKMKTDGNIRYDILASMTEGFSGAEIKNVCTEAGYI 354 Query: 478 AI 473 AI Sbjct: 355 AI 356
>FTSH_BUCBP (Q89AF2) Cell division protein ftsH (EC 3.4.24.-)| Length = 610 Score = 51.2 bits (121), Expect = 3e-06 Identities = 22/61 (36%), Positives = 37/61 (60%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSGADITEICQRACKY 479 R D+ I++ LPD+ R +I + ++K PL ++D +A+ T GFSGAD+ + A + Sbjct: 312 RFDRQIFVALPDIRGREKIIQVHMKKVPLGNNVDPMIIARGTPGFSGADLANLVNEAALF 371 Query: 478 A 476 A Sbjct: 372 A 372
>PSMR_METJA (Q58576) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 430 Score = 51.2 bits (121), Expect = 3e-06 Identities = 26/62 (41%), Positives = 37/62 (59%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSGADITEICQRACKY 479 R D++I +P PD R +I K RK LA+D++L +AK T+G GA++ IC A Sbjct: 331 RFDRIIEVPAPDEKGRLEILKIHTRKMNLAEDVNLEEIAKMTEGCVGAELKAICTEAGMN 390 Query: 478 AI 473 AI Sbjct: 391 AI 392
>PSMR_PYRAB (Q9V287) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 399 Score = 51.2 bits (121), Expect = 3e-06 Identities = 27/62 (43%), Positives = 39/62 (62%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSGADITEICQRACKY 479 R D+LI +PLPD + R +I K R+ L K++DL +A+ T+G SGAD+ I A + Sbjct: 301 RFDRLIEVPLPDFEGRLEILKVHTRRMKL-KNVDLRVIAEITEGASGADLKAIATEAGMF 359 Query: 478 AI 473 AI Sbjct: 360 AI 361
>PSMR_PYRKO (Q5JHS5) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 397 Score = 50.4 bits (119), Expect = 5e-06 Identities = 28/62 (45%), Positives = 37/62 (59%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSGADITEICQRACKY 479 R D+LI +PLPD R +I K RK L K +DL +A+ T+G SGAD+ I A + Sbjct: 299 RFDRLIEVPLPDYQGRLEILKVHTRKMNL-KGVDLRVIAEITEGASGADLKAIATEAGMF 357 Query: 478 AI 473 AI Sbjct: 358 AI 359
>PSMR_PYRFU (Q8U4H3) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 396 Score = 48.9 bits (115), Expect = 1e-05 Identities = 26/62 (41%), Positives = 38/62 (61%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSGADITEICQRACKY 479 R D+LI +PLPD + R +I K R+ L + +DL +A+ T+G SGAD+ I A + Sbjct: 298 RFDRLIEVPLPDFEGRLEILKVHTRRMKL-RGVDLRLIAELTEGASGADLKAIATEAGMF 356 Query: 478 AI 473 AI Sbjct: 357 AI 358
>FTSH_STRR6 (P59652) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 652 Score = 48.9 bits (115), Expect = 1e-05 Identities = 23/61 (37%), Positives = 33/61 (54%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSGADITEICQRACKY 479 R D+ + + PDV R I K + PLA+D+DL +A+ T GF GAD+ + A Sbjct: 347 RFDRKVLVGRPDVKGREAILKVHAKNKPLAEDVDLKLVAQQTPGFVGADLENVLNEAALV 406 Query: 478 A 476 A Sbjct: 407 A 407
>FTSH_STRPN (O69076) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 652 Score = 48.9 bits (115), Expect = 1e-05 Identities = 23/61 (37%), Positives = 33/61 (54%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSGADITEICQRACKY 479 R D+ + + PDV R I K + PLA+D+DL +A+ T GF GAD+ + A Sbjct: 347 RFDRKVLVGRPDVKGREAILKVHAKNKPLAEDVDLKLVAQQTPGFVGADLENVLNEAALV 406 Query: 478 A 476 A Sbjct: 407 A 407
>PRS7_ARATH (Q9SSB5) 26S protease regulatory subunit 7 (26S proteasome subunit| 7) (26S proteasome AAA-ATPase subunit RPT1a) (Regulatory particle triple-A ATPase subunit 1a) Length = 426 Score = 48.5 bits (114), Expect = 2e-05 Identities = 26/62 (41%), Positives = 34/62 (54%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSGADITEICQRACKY 479 RLD+ + LPD++SR QIFK R +DI LA+ +GADI +C A Y Sbjct: 329 RLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMY 388 Query: 478 AI 473 AI Sbjct: 389 AI 390
>PRS7_PRUPE (O64982) 26S protease regulatory subunit 7 (26S proteasome subunit| 7) (26S proteasome AAA-ATPase subunit RPT1) (Regulatory particle triple-A ATPase subunit 1) Length = 425 Score = 48.5 bits (114), Expect = 2e-05 Identities = 26/62 (41%), Positives = 34/62 (54%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSGADITEICQRACKY 479 RLD+ + LPD++SR QIFK R +DI LA+ +GADI +C A Y Sbjct: 328 RLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMY 387 Query: 478 AI 473 AI Sbjct: 388 AI 389
>FTSH_BACPF (P94304) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 679 Score = 48.5 bits (114), Expect = 2e-05 Identities = 23/61 (37%), Positives = 33/61 (54%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSGADITEICQRACKY 479 R D+ I + PDV+ R ++ K R PL D++L +A T GFSGAD+ + A Sbjct: 326 RFDRQIQVNRPDVNGREEVLKVHARNKPLNDDVNLKTIATRTPGFSGADLENLLNEAALV 385 Query: 478 A 476 A Sbjct: 386 A 386
>PRS4_ORYSA (P46466) 26S protease regulatory subunit 4 homolog (TAT-binding| protein homolog 2) Length = 448 Score = 48.1 bits (113), Expect = 2e-05 Identities = 24/57 (42%), Positives = 32/57 (56%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSGADITEICQRA 488 R+D+ I PLPD+ +R +IF+ K LA D++L FSGADI IC A Sbjct: 354 RIDRKIEFPLPDIKTRRRIFQIHTSKMTLADDVNLEEFVMTKDEFSGADIKAICTEA 410
>PSMR2_HALSA (Q9HRW6) Proteasome-activating nucleotidase 2 (Proteasome| regulatory subunit 2) Length = 407 Score = 47.8 bits (112), Expect = 3e-05 Identities = 25/62 (40%), Positives = 34/62 (54%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSGADITEICQRACKY 479 R D+LI +P P+V R +IF+ R +A +D LA T SGAD+ IC A + Sbjct: 310 RFDRLIEVPHPNVGGREKIFRIHTRAMNVADSVDFGELAADTGDLSGADVKAICTEAGMF 369 Query: 478 AI 473 AI Sbjct: 370 AI 371
>AFG31_MOUSE (Q920A7) AFG3-like protein 1 (EC 3.4.24.-)| Length = 663 Score = 47.4 bits (111), Expect = 4e-05 Identities = 28/65 (43%), Positives = 34/65 (52%), Gaps = 4/65 (6%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRHQIFKACLRK----SPLAKDIDLSALAKYTQGFSGADITEICQR 491 R D+ IYI PD+ R IFK LR L+KD LA T GF+GADI+ +C Sbjct: 334 RFDRQIYIGPPDIKGRSSIFKVHLRPLKLDGSLSKDALSRKLAALTPGFTGADISNVCNE 393 Query: 490 ACKYA 476 A A Sbjct: 394 AALIA 398
>CDCH_HALSA (Q9HPF0) Protein cdcH| Length = 742 Score = 47.4 bits (111), Expect = 4e-05 Identities = 26/62 (41%), Positives = 35/62 (56%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSGADITEICQRACKY 479 R D+ I I +PD R +I K R PL+ D++LS LA T GF GADI + + A Sbjct: 347 RFDREIEIGVPDEIGREEILKIHTRGMPLSDDVNLSTLADDTHGFVGADIESLSKEAAMR 406 Query: 478 AI 473 A+ Sbjct: 407 AL 408 Score = 46.2 bits (108), Expect = 9e-05 Identities = 30/130 (23%), Positives = 54/130 (41%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSGADITEICQRACKY 479 R D+L+ + P ++ R QI K + +PLA D+ L LA+ G+ G+D+ I + A Sbjct: 621 RFDRLVQVGQPGIEGREQILKIHTQDTPLAADVSLRELAERADGYVGSDLANIAREAAIE 680 Query: 478 AIXXXXXXXXXXXXXXXXNPXXXXXXXXXXXXEIRAAHFEESMKYARRSVSDADIRKYQA 299 A+ ++ AHF +M+ R +++D + Y Sbjct: 681 AL-----------------------RDDEDADDVGMAHFRAAMENVRPTITDDLMEYYDQ 717 Query: 298 FAQTLQQSRG 269 + S+G Sbjct: 718 VEDQFKGSQG 727
>CD48B_ARATH (Q9ZPR1) Cell division control protein 48 homolog B (AtCDC48b)| Length = 603 Score = 47.0 bits (110), Expect = 5e-05 Identities = 19/57 (33%), Positives = 36/57 (63%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSGADITEICQRA 488 R D ++Y+P PD+++R +I + R L D+DL +A+ T F+GA++ +C+ + Sbjct: 448 RFDLVLYVPPPDLEARFEILQVHTRNMTLGDDVDLRKIAEETDLFTGAELEGLCRES 504 Score = 38.5 bits (88), Expect = 0.018 Identities = 18/57 (31%), Positives = 31/57 (54%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSGADITEICQRA 488 R D L+ + P+ + R +I + +K L +DL A+A G+ GAD+ +C+ A Sbjct: 186 RFDALVEVSTPNEEDRLKILQLYTKKVNLDPSVDLQAIAISCNGYVGADLEALCREA 242
>YME1_YEAST (P32795) Protein YME1 (EC 3.4.24.-) (TAT-binding homolog 11) (OSD1| protein) Length = 747 Score = 47.0 bits (110), Expect = 5e-05 Identities = 22/61 (36%), Positives = 37/61 (60%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSGADITEICQRACKY 479 R D+++ + LPDV R I K ++K LA ++D + +A+ T G SGA++ + +A Y Sbjct: 438 RFDKVVNVDLPDVRGRADILKHHMKKITLADNVDPTIIARGTPGLSGAELANLVNQAAVY 497 Query: 478 A 476 A Sbjct: 498 A 498
>PRS7_SPIOL (Q41365) 26S protease regulatory subunit 7 (26S proteasome subunit| 7) (26S proteasome AAA-ATPase subunit RPT1) (Regulatory particle triple-A ATPase subunit 1) Length = 426 Score = 47.0 bits (110), Expect = 5e-05 Identities = 25/62 (40%), Positives = 33/62 (53%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSGADITEICQRACKY 479 RLD+ + LPD++ R QIFK R +DI LA+ +GADI +C A Y Sbjct: 329 RLDRKVEFGLPDLEGRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMY 388 Query: 478 AI 473 AI Sbjct: 389 AI 390
>PRS7_ORYSA (Q9FXT9) 26S protease regulatory subunit 7 (26S proteasome subunit| 7) (26S proteasome AAA-ATPase subunit RPT1) (Regulatory particle triple-A ATPase subunit 1) Length = 426 Score = 47.0 bits (110), Expect = 5e-05 Identities = 25/62 (40%), Positives = 33/62 (53%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSGADITEICQRACKY 479 RLD+ + LPD++ R QIFK R +DI LA+ +GADI +C A Y Sbjct: 329 RLDRKVEFGLPDLEGRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMY 388 Query: 478 AI 473 AI Sbjct: 389 AI 390
>AFG32_HUMAN (Q9Y4W6) AFG3-like protein 2 (EC 3.4.24.-) (Paraplegin-like| protein) Length = 797 Score = 46.6 bits (109), Expect = 7e-05 Identities = 28/65 (43%), Positives = 33/65 (50%), Gaps = 4/65 (6%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRHQIFKACLRK----SPLAKDIDLSALAKYTQGFSGADITEICQR 491 R D+ I+I PD+ R IFK LR S L KD LA T GFSGAD+ +C Sbjct: 468 RFDRQIFIGPPDIKGRASIFKVHLRPLKLDSTLEKDKLARKLASLTPGFSGADVANVCNE 527 Query: 490 ACKYA 476 A A Sbjct: 528 AALIA 532
>AF3G2_MOUSE (Q8JZQ2) AFG3-like protein 2 (EC 3.4.24.-)| Length = 802 Score = 46.6 bits (109), Expect = 7e-05 Identities = 28/65 (43%), Positives = 33/65 (50%), Gaps = 4/65 (6%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRHQIFKACLRK----SPLAKDIDLSALAKYTQGFSGADITEICQR 491 R D+ I+I PD+ R IFK LR S L KD LA T GFSGAD+ +C Sbjct: 467 RFDRQIFIGPPDIKGRASIFKVHLRPLKLDSALEKDKLARKLASLTPGFSGADVANVCNE 526 Query: 490 ACKYA 476 A A Sbjct: 527 AALIA 531
>PRS6B_SOLTU (P54778) 26S protease regulatory subunit 6B homolog| Length = 413 Score = 46.6 bits (109), Expect = 7e-05 Identities = 23/62 (37%), Positives = 32/62 (51%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSGADITEICQRACKY 479 RLD+ I PLPD + +F+ C K L ++DL S A+IT ICQ A + Sbjct: 321 RLDRKIEFPLPDRRQKRLVFQVCTAKMNLGDEVDLEDYVSRPDKISAAEITAICQEAGMH 380 Query: 478 AI 473 A+ Sbjct: 381 AV 382
>PRS10_SPETR (P62335) 26S protease regulatory subunit S10B (Proteasome subunit| p42) (Proteasome 26S subunit ATPase 6) (Conserved ATPase domain protein 44) (CADp44) Length = 389 Score = 46.2 bits (108), Expect = 9e-05 Identities = 25/64 (39%), Positives = 38/64 (59%), Gaps = 2/64 (3%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRHQIFKACLRKSPLAK--DIDLSALAKYTQGFSGADITEICQRAC 485 RLD+ I+I LP+ +R I K + P+ K +ID A+ K + GF+GAD+ +C A Sbjct: 294 RLDRKIHIDLPNEQARLDILK--IHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAG 351 Query: 484 KYAI 473 +AI Sbjct: 352 MFAI 355
>PRS10_MOUSE (P62334) 26S protease regulatory subunit S10B (Proteasome subunit| p42) (Proteasome 26S subunit ATPase 6) Length = 389 Score = 46.2 bits (108), Expect = 9e-05 Identities = 25/64 (39%), Positives = 38/64 (59%), Gaps = 2/64 (3%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRHQIFKACLRKSPLAK--DIDLSALAKYTQGFSGADITEICQRAC 485 RLD+ I+I LP+ +R I K + P+ K +ID A+ K + GF+GAD+ +C A Sbjct: 294 RLDRKIHIDLPNEQARLDILK--IHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAG 351 Query: 484 KYAI 473 +AI Sbjct: 352 MFAI 355
>PRS10_HUMAN (P62333) 26S protease regulatory subunit S10B (Proteasome subunit| p42) (Proteasome 26S subunit ATPase 6) Length = 389 Score = 46.2 bits (108), Expect = 9e-05 Identities = 25/64 (39%), Positives = 38/64 (59%), Gaps = 2/64 (3%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRHQIFKACLRKSPLAK--DIDLSALAKYTQGFSGADITEICQRAC 485 RLD+ I+I LP+ +R I K + P+ K +ID A+ K + GF+GAD+ +C A Sbjct: 294 RLDRKIHIDLPNEQARLDILK--IHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAG 351 Query: 484 KYAI 473 +AI Sbjct: 352 MFAI 355
>PEX1_HUMAN (O43933) Peroxisome biogenesis factor 1 (Peroxin-1) (Peroxisome| biogenesis disorder protein 1) Length = 1283 Score = 46.2 bits (108), Expect = 9e-05 Identities = 23/57 (40%), Positives = 31/57 (54%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSGADITEICQRA 488 RLD+ +Y P PD SR +I PLA D+DL +A T F+GAD+ + A Sbjct: 998 RLDKCVYCPPPDQVSRLEILNVLSDSLPLADDVDLQHVASVTDSFTGADLKALLYNA 1054
>FTSH_LACLA (P46469) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 695 Score = 45.8 bits (107), Expect = 1e-04 Identities = 21/61 (34%), Positives = 31/61 (50%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSGADITEICQRACKY 479 R D+ + + PDV R + K + PLA D+DL +A T G+ GAD+ + A Sbjct: 354 RFDRKVLVGAPDVKGREAVLKVHAKNKPLASDVDLHNVATQTPGYVGADLENVLNEAALV 413 Query: 478 A 476 A Sbjct: 414 A 414
>SPG7_HUMAN (Q9UQ90) Paraplegin (EC 3.4.24.-) (Spastic paraplegia protein 7)| Length = 795 Score = 45.8 bits (107), Expect = 1e-04 Identities = 25/63 (39%), Positives = 36/63 (57%), Gaps = 2/63 (3%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSA--LAKYTQGFSGADITEICQRAC 485 RLD+ ++I LP + R +IF+ L+ L + + LA+ T GFSGADI IC A Sbjct: 470 RLDRHVFIDLPTLQERREIFEQHLKSLKLTQSSTFYSQRLAELTPGFSGADIANICNEAA 529 Query: 484 KYA 476 +A Sbjct: 530 LHA 532
>FTSH_HELFE (O32617) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 638 Score = 45.4 bits (106), Expect = 1e-04 Identities = 22/61 (36%), Positives = 32/61 (52%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSGADITEICQRACKY 479 R D+ + + PD R +I K ++ LA D+DL +AK T G +GAD+ I A Sbjct: 338 RFDRQVLVDKPDFKGRVEILKVHIKPVKLANDVDLQEIAKLTAGLAGADLANIINEAALL 397 Query: 478 A 476 A Sbjct: 398 A 398
>PRS10_CAEEL (O17071) Probable 26S protease regulatory subunit S10B (Proteasome| regulatory particle ATPase-like protein 4) Length = 406 Score = 45.4 bits (106), Expect = 1e-04 Identities = 25/62 (40%), Positives = 34/62 (54%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSGADITEICQRACKY 479 RLD+ I I LP+ SR +I K K +ID A+ K + GFS AD+ +C A + Sbjct: 311 RLDRKIEIGLPNEQSRLEILKIHSNKITKHGEIDFEAVVKLSDGFSAADLRNVCTEAGMF 370 Query: 478 AI 473 AI Sbjct: 371 AI 372
>PRS6B_ARATH (Q9SEI4) 26S protease regulatory subunit 6B homolog (26S proteasome| AAA-ATPase subunit RPT3) (Regulatory particle triple-A ATPase subunit 3) Length = 408 Score = 45.1 bits (105), Expect = 2e-04 Identities = 22/62 (35%), Positives = 32/62 (51%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSGADITEICQRACKY 479 RLD+ I PLPD + +F+ C K L+ ++DL S A+I ICQ A + Sbjct: 316 RLDRKIEFPLPDRRQKRLVFQVCTSKMNLSDEVDLEDYVSRPDKISAAEIAAICQEAGMH 375 Query: 478 AI 473 A+ Sbjct: 376 AV 377
>FTSH_CYACA (O19922) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 614 Score = 45.1 bits (105), Expect = 2e-04 Identities = 21/57 (36%), Positives = 33/57 (57%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSGADITEICQRA 488 R D+ I + LP+++ R I K +K + KD+ L +A+ T GFSGAD+ + A Sbjct: 331 RFDRQIMVSLPNINGRLAILKVHSKKKKIHKDVLLEVIARRTPGFSGADLANLLNEA 387
>MSP1_YEAST (P28737) Protein MSP1 (TAT-binding homolog 4)| Length = 362 Score = 44.7 bits (104), Expect = 2e-04 Identities = 22/58 (37%), Positives = 35/58 (60%), Gaps = 1/58 (1%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRHQIFKACLRKSPLAKD-IDLSALAKYTQGFSGADITEICQRA 488 RL + + LP D R++I L+ + L +D DL +A T+GFSG+D+ E+C+ A Sbjct: 248 RLPKRFLVSLPGSDQRYKILSVLLKDTKLDEDEFDLQLIADNTKGFSGSDLKELCREA 305
>PRS4_DROME (P48601) 26S protease regulatory subunit 4 (P26s4)| Length = 439 Score = 44.7 bits (104), Expect = 2e-04 Identities = 23/57 (40%), Positives = 32/57 (56%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSGADITEICQRA 488 R+D+ I PLPD ++ +IF + LA+D++LS L SGADI IC A Sbjct: 345 RIDRKIEFPLPDEKTKRRIFTIHTSRMTLAEDVNLSELIMAKDDLSGADIKAICTEA 401
>PRS7_XENLA (P46472) 26S protease regulatory subunit 7 (MSS1 protein)| Length = 433 Score = 44.3 bits (103), Expect = 3e-04 Identities = 23/62 (37%), Positives = 33/62 (53%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSGADITEICQRACKY 479 RLD+ I LPD++ R IFK R + +DI LA+ +GA+I +C A + Sbjct: 336 RLDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMF 395 Query: 478 AI 473 AI Sbjct: 396 AI 397
>FTSH_TREPA (O83746) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 609 Score = 44.3 bits (103), Expect = 3e-04 Identities = 20/62 (32%), Positives = 34/62 (54%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSGADITEICQRACKY 479 R D+ + + PD+ R I + + LA ++DL A+A+ T G+SGAD+ + A Sbjct: 300 RFDRQVCVDRPDLKGREAILRIHAQNVKLAPEVDLKAVARITGGYSGADLANVVNEAALL 359 Query: 478 AI 473 A+ Sbjct: 360 AV 361
>FTSH2_ARATH (Q9FH02) Cell division protein ftsH homolog 2, chloroplast| precursor (EC 3.4.24.-) Length = 704 Score = 44.3 bits (103), Expect = 3e-04 Identities = 21/57 (36%), Positives = 31/57 (54%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSGADITEICQRA 488 R D+ + + PDV R QI K R + KD+D +A+ T GF+GAD+ + A Sbjct: 410 RFDRQVTVDRPDVAGRVQILKVHSRGKAIGKDVDYEKVARRTPGFTGADLQNLMNEA 466
>PRS6B_MANSE (P46507) 26S protease regulatory subunit 6B (ATPase MS73)| Length = 415 Score = 44.3 bits (103), Expect = 3e-04 Identities = 24/62 (38%), Positives = 31/62 (50%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSGADITEICQRACKY 479 RLD+ I PLPD + IF K L++++DL SGADI ICQ A Sbjct: 323 RLDRKIEFPLPDRRQKRLIFSTITAKMNLSEEVDLEEFVARPDRVSGADINAICQEAGMN 382 Query: 478 AI 473 A+ Sbjct: 383 AV 384
>FTSH_BACSU (P37476) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 637 Score = 44.3 bits (103), Expect = 3e-04 Identities = 22/61 (36%), Positives = 32/61 (52%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSGADITEICQRACKY 479 R D+ I + PDV R + K R PL + ++L ++A T GFSGAD+ + A Sbjct: 321 RFDRQITVDRPDVIGREAVLKVHARNKPLDETVNLKSIAMRTPGFSGADLENLLNEAALV 380 Query: 478 A 476 A Sbjct: 381 A 381
>FTSH_CYAME (Q9TJ83) Cell division protein ftsH homolog (EC 3.4.24.-) (FtsHCP)| Length = 603 Score = 44.3 bits (103), Expect = 3e-04 Identities = 22/62 (35%), Positives = 33/62 (53%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSGADITEICQRACKY 479 R D+ I + +PDV SR I K + L + L A+A+ T GF+GAD+ + A Sbjct: 314 RFDRQIMVSMPDVKSRIAILKVHANQKKLHPQVSLEAVARRTAGFAGADLANLLNEAAIL 373 Query: 478 AI 473 A+ Sbjct: 374 AV 375
>TBP7_YEAST (P40340) TAT-binding homolog 7| Length = 1379 Score = 44.3 bits (103), Expect = 3e-04 Identities = 25/64 (39%), Positives = 37/64 (57%), Gaps = 2/64 (3%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRHQIFKACLRK--SPLAKDIDLSALAKYTQGFSGADITEICQRAC 485 R D+ Y PLPDV +R +I + RK SPL+ + + LA T+G+ GAD+ +C A Sbjct: 576 RFDREFYFPLPDVKARFKILQIQTRKWSSPLSTNF-IDKLAFLTKGYGGADLRSLCTEAA 634 Query: 484 KYAI 473 +I Sbjct: 635 LISI 638
>FTSH_ODOSI (P49825) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 644 Score = 44.3 bits (103), Expect = 3e-04 Identities = 23/57 (40%), Positives = 30/57 (52%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSGADITEICQRA 488 R D+ + + LPD R I K R PL +D+ L LA T GFSGAD+ + A Sbjct: 346 RFDRQVTVNLPDRLGRVGILKVHARNKPLGEDVSLVQLANRTPGFSGADLANLLNEA 402
>PRS7_RAT (Q63347) 26S protease regulatory subunit 7 (MSS1 protein)| Length = 432 Score = 44.3 bits (103), Expect = 3e-04 Identities = 23/62 (37%), Positives = 33/62 (53%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSGADITEICQRACKY 479 RLD+ I LPD++ R IFK R + +DI LA+ +GA+I +C A + Sbjct: 335 RLDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMF 394 Query: 478 AI 473 AI Sbjct: 395 AI 396
>PRS7_MOUSE (P46471) 26S protease regulatory subunit 7 (MSS1 protein)| Length = 432 Score = 44.3 bits (103), Expect = 3e-04 Identities = 23/62 (37%), Positives = 33/62 (53%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSGADITEICQRACKY 479 RLD+ I LPD++ R IFK R + +DI LA+ +GA+I +C A + Sbjct: 335 RLDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMF 394 Query: 478 AI 473 AI Sbjct: 395 AI 396
>PRS7_HUMAN (P35998) 26S protease regulatory subunit 7 (MSS1 protein)| Length = 432 Score = 44.3 bits (103), Expect = 3e-04 Identities = 23/62 (37%), Positives = 33/62 (53%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSGADITEICQRACKY 479 RLD+ I LPD++ R IFK R + +DI LA+ +GA+I +C A + Sbjct: 335 RLDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMF 394 Query: 478 AI 473 AI Sbjct: 395 AI 396
>PRS8_YEAST (Q01939) 26S protease regulatory subunit 8 homolog (SUG1 protein)| (CIM3 protein) (TAT-binding protein TBY1) Length = 405 Score = 44.3 bits (103), Expect = 3e-04 Identities = 23/62 (37%), Positives = 35/62 (56%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSGADITEICQRACKY 479 R+D+ I P P V +R +I + RK L + I+L +A+ G SGAD+ +C A Y Sbjct: 309 RIDRKIEFPPPSVAARAEILRIHSRKMNLTRGINLRKVAEKMNGCSGADVKGVCTEAGMY 368 Query: 478 AI 473 A+ Sbjct: 369 AL 370
>PRS6B_DICDI (P34123) 26S protease regulatory subunit 6B homolog (TAT-binding| protein homolog 2) Length = 403 Score = 44.3 bits (103), Expect = 3e-04 Identities = 24/62 (38%), Positives = 32/62 (51%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSGADITEICQRACKY 479 RLD+ I PLPD + IF+ K L+ ++DL SGA+I ICQ A + Sbjct: 311 RLDRKIEFPLPDRRQKRLIFQVITSKMNLSDEVDLEDYVSRPDKLSGAEIQSICQEAGMH 370 Query: 478 AI 473 AI Sbjct: 371 AI 372
>SPAST_HUMAN (Q9UBP0) Spastin| Length = 616 Score = 43.9 bits (102), Expect = 4e-04 Identities = 33/120 (27%), Positives = 54/120 (45%), Gaps = 2/120 (1%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRHQIFK--ACLRKSPLAKDIDLSALAKYTQGFSGADITEICQRAC 485 R + +Y+ LP+ ++R + K C + SPL + +L+ LA+ T G+SG+D+T + + A Sbjct: 499 RFIKRVYVSLPNEETRLLLLKNLLCKQGSPLTQK-ELAQLARMTDGYSGSDLTALAKDAA 557 Query: 484 KYAIXXXXXXXXXXXXXXXXNPXXXXXXXXXXXXEIRAAHFEESMKYARRSVSDADIRKY 305 I P IR + F ES+K +RSVS + Y Sbjct: 558 LGPI-------------RELKPEQVKNMSASEMRNIRLSDFTESLKKIKRSVSPQTLEAY 604
>FTSH4_SYNY3 (P72991) Cell division protein ftsH homolog 4 (EC 3.4.24.-)| Length = 616 Score = 43.9 bits (102), Expect = 4e-04 Identities = 19/57 (33%), Positives = 32/57 (56%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSGADITEICQRA 488 R D+ + + PD R +I R L++D+DL +A+ T GF+GAD++ + A Sbjct: 321 RFDRQVVVDRPDYAGRREILNVHARGKTLSQDVDLDKIARRTPGFTGADLSNLLNEA 377
>SPAST_MOUSE (Q9QYY8) Spastin| Length = 614 Score = 43.9 bits (102), Expect = 4e-04 Identities = 33/120 (27%), Positives = 54/120 (45%), Gaps = 2/120 (1%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRHQIFK--ACLRKSPLAKDIDLSALAKYTQGFSGADITEICQRAC 485 R + +Y+ LP+ ++R + K C + SPL + +L+ LA+ T G+SG+D+T + + A Sbjct: 497 RFIKRVYVSLPNEETRLLLLKNLLCKQGSPLTQK-ELAQLARMTDGYSGSDLTALAKDAA 555 Query: 484 KYAIXXXXXXXXXXXXXXXXNPXXXXXXXXXXXXEIRAAHFEESMKYARRSVSDADIRKY 305 I P IR + F ES+K +RSVS + Y Sbjct: 556 LGPI-------------RELKPEQVKNMSASEMRNIRLSDFTESLKKIKRSVSPQTLEAY 602
>NVL_HUMAN (O15381) Nuclear valosin-containing protein-like (Nuclear VCP-like| protein) (NVLp) Length = 856 Score = 43.9 bits (102), Expect = 4e-04 Identities = 23/62 (37%), Positives = 33/62 (53%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSGADITEICQRACKY 479 R D+ I + +PD SR +I + RK L + D LA T GF GAD+ +C+ A Sbjct: 425 RFDREICLGIPDEASRERILQTLCRKLRLPQAFDFCHLAHLTPGFVGADLMALCREAAMC 484 Query: 478 AI 473 A+ Sbjct: 485 AV 486
>PSMR_METMP (Q6LWR0) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 407 Score = 43.9 bits (102), Expect = 4e-04 Identities = 24/62 (38%), Positives = 34/62 (54%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSGADITEICQRACKY 479 R D++I I +PD D R +I K K L K +DL +AK + GAD+ +C A + Sbjct: 309 RFDRIIEISMPDEDGRLEILKIHTEKMNL-KGVDLREVAKIAENMVGADLKAVCTEAGMF 367 Query: 478 AI 473 AI Sbjct: 368 AI 369
>FTSH_MYCPU (Q98PE4) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 725 Score = 43.5 bits (101), Expect = 6e-04 Identities = 20/57 (35%), Positives = 32/57 (56%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSGADITEICQRA 488 R D++I + LPD+ R +I K + L+K+I +AK T G+SGA + + A Sbjct: 372 RFDRIITVGLPDIKEREEILKLHSKGKRLSKEIKFDKIAKRTPGYSGAQLENVINEA 428
>PRS6B_CAEEL (P46502) Probable 26S protease regulatory subunit 6B| Length = 414 Score = 43.5 bits (101), Expect = 6e-04 Identities = 23/62 (37%), Positives = 30/62 (48%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSGADITEICQRACKY 479 RLD+ I PLPD + +F + L+ D+DL SGADI ICQ A Sbjct: 322 RLDRKIEFPLPDRRQKRLVFSTVCSRMNLSDDVDLEDWVARPDKISGADINSICQEAGMQ 381 Query: 478 AI 473 A+ Sbjct: 382 AV 383
>ATD1B_BRARE (Q503W7) ATPase family AAA domain-containing protein 1-B| Length = 362 Score = 43.5 bits (101), Expect = 6e-04 Identities = 21/57 (36%), Positives = 32/57 (56%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSGADITEICQRA 488 R+ +I P+V R I K L + ++LS +AK T GFSG+D+ E+C+ A Sbjct: 254 RMPTRFHINQPNVRQRKDILKLILENENVESAVELSEIAKQTDGFSGSDLREMCRDA 310
>PRS6B_RAT (Q63570) 26S protease regulatory subunit 6B (TAT-binding protein 7)| (TBP-7) Length = 418 Score = 43.5 bits (101), Expect = 6e-04 Identities = 23/62 (37%), Positives = 31/62 (50%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSGADITEICQRACKY 479 RLD+ I PLPD + IF K L++++DL SGADI ICQ + Sbjct: 326 RLDRKIEFPLPDRRQKRLIFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQESGML 385 Query: 478 AI 473 A+ Sbjct: 386 AV 387
>PRS6B_HUMAN (P43686) 26S protease regulatory subunit 6B (MIP224)| (MB67-interacting protein) (TAT-binding protein 7) (TBP-7) Length = 418 Score = 43.5 bits (101), Expect = 6e-04 Identities = 23/62 (37%), Positives = 31/62 (50%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSGADITEICQRACKY 479 RLD+ I PLPD + IF K L++++DL SGADI ICQ + Sbjct: 326 RLDRKIEFPLPDRRQKRLIFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQESGML 385 Query: 478 AI 473 A+ Sbjct: 386 AV 387
>FTSH_HELPY (P71408) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 632 Score = 43.5 bits (101), Expect = 6e-04 Identities = 21/61 (34%), Positives = 33/61 (54%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSGADITEICQRACKY 479 R D+ + + PD + R +I K ++ LA D++L +AK T G +GAD+ I A Sbjct: 332 RFDRQVLVDKPDFNGRVEILKVHIKGVKLANDVNLQEVAKLTAGLAGADLANIINEAALL 391 Query: 478 A 476 A Sbjct: 392 A 392
>FTSH_HELPJ (Q9ZM66) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 632 Score = 43.5 bits (101), Expect = 6e-04 Identities = 21/61 (34%), Positives = 33/61 (54%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSGADITEICQRACKY 479 R D+ + + PD + R +I K ++ LA D++L +AK T G +GAD+ I A Sbjct: 332 RFDRQVLVDKPDFNGRVEILKVHIKGVKLANDVNLQEVAKLTAGLAGADLANIINEAALL 391 Query: 478 A 476 A Sbjct: 392 A 392
>PRS10_SCHPO (O74445) Probable 26S protease subunit rpt4| Length = 388 Score = 43.5 bits (101), Expect = 6e-04 Identities = 26/62 (41%), Positives = 33/62 (53%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSGADITEICQRACKY 479 RLD+ I IPLP+ R +I K L K +ID AL K T G +GAD+ + A Sbjct: 293 RLDRKIEIPLPNEVGRMEILKIHLEKVSKQGEIDYEALVKLTDGTNGADLRNVVTEAGFI 352 Query: 478 AI 473 AI Sbjct: 353 AI 354
>ATD1A_BRARE (Q7ZZ25) ATPase family AAA domain-containing protein 1-A| Length = 380 Score = 43.1 bits (100), Expect = 7e-04 Identities = 18/62 (29%), Positives = 35/62 (56%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSGADITEICQRACKY 479 R+ ++ LP+ R +I + L L+ I+L +A ++G+SG+D+ E+C+ A Y Sbjct: 253 RMPTAFHVGLPNAAQREEILRLILSGENLSNAINLKEIASQSEGYSGSDLKELCRDAAMY 312 Query: 478 AI 473 + Sbjct: 313 RV 314
>PEX1_PICPA (P46463) Peroxisome biosynthesis protein PAS1 (Peroxin-1)| Length = 1157 Score = 43.1 bits (100), Expect = 7e-04 Identities = 21/62 (33%), Positives = 35/62 (56%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSGADITEICQRACKY 479 RLD+ + +PD D R I ++ R ++K ++LS++A GFSGAD+ + A Sbjct: 957 RLDKSVICDMPDFDDRLDILQSVTRNMNVSKSVNLSSVAGECSGFSGADLQALAYNAYLK 1016 Query: 478 AI 473 A+ Sbjct: 1017 AV 1018
>YMEL1_RAT (Q925S8) ATP-dependent metalloprotease YME1L1 (EC 3.4.24.-)| (YME1-like protein 1) (ATP-dependent metalloprotease FtsH1) (Meg-4) Length = 715 Score = 43.1 bits (100), Expect = 7e-04 Identities = 21/57 (36%), Positives = 31/57 (54%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSGADITEICQRA 488 R D + +P PDV R +I K L K K +D +A+ T GFSGA++ + +A Sbjct: 439 RFDMQVTVPRPDVKGRTEILKWYLNKIKFDKSVDPEIIARGTVGFSGAELENLVNQA 495
>YMEL1_MOUSE (O88967) ATP-dependent metalloprotease YME1L1 (EC 3.4.24.-)| (YME1-like protein 1) (ATP-dependent metalloprotease FtsH1) Length = 715 Score = 43.1 bits (100), Expect = 7e-04 Identities = 21/57 (36%), Positives = 31/57 (54%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSGADITEICQRA 488 R D + +P PDV R +I K L K K +D +A+ T GFSGA++ + +A Sbjct: 439 RFDMQVTVPRPDVKGRTEILKWYLNKIKFDKSVDPEIIARGTVGFSGAELENLVNQA 495
>TBP6_YEAST (P40328) Probable 26S protease subunit YTA6 (TAT-binding homolog 6)| Length = 754 Score = 43.1 bits (100), Expect = 7e-04 Identities = 20/58 (34%), Positives = 35/58 (60%), Gaps = 1/58 (1%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRHQIFKACLRKSPLA-KDIDLSALAKYTQGFSGADITEICQRA 488 R + +YIPLPD ++R K + K + +D+D + + T+GFSG+D+T + + A Sbjct: 638 RFSRKLYIPLPDYETRLYHLKRLMAKQKNSLQDLDYELITEMTEGFSGSDLTSLAKEA 695
>FTSH1_SYNY3 (Q55700) Cell division protein ftsH homolog 1 (EC 3.4.24.-)| Length = 627 Score = 43.1 bits (100), Expect = 7e-04 Identities = 18/57 (31%), Positives = 31/57 (54%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSGADITEICQRA 488 R D+ + + PD R +I + R LA ++ + ++A+ T GFSGAD+ + A Sbjct: 332 RFDRQVMVDAPDYSGRKEILEVHARNKKLAPEVSIDSIARRTPGFSGADLANLLNEA 388
>VPS4A_MOUSE (Q8VEJ9) Vacuolar sorting protein 4a| Length = 437 Score = 43.1 bits (100), Expect = 7e-04 Identities = 23/54 (42%), Positives = 36/54 (66%), Gaps = 1/54 (1%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRHQIFKACLRKSP-LAKDIDLSALAKYTQGFSGADITEI 500 R ++ IYIPLP+ +R Q+F+ L +P D ++ LA+ T+G+SGADI+ I Sbjct: 284 RFEKRIYIPLPEEAARAQMFRLHLGSTPHNLTDANIHELARKTEGYSGADISII 337
>VPS4A_HUMAN (Q9UN37) Vacuolar sorting protein 4a (SKD2 protein) (hVPS4)| (VPS4-1) Length = 437 Score = 43.1 bits (100), Expect = 7e-04 Identities = 23/54 (42%), Positives = 36/54 (66%), Gaps = 1/54 (1%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRHQIFKACLRKSP-LAKDIDLSALAKYTQGFSGADITEI 500 R ++ IYIPLP+ +R Q+F+ L +P D ++ LA+ T+G+SGADI+ I Sbjct: 284 RFEKRIYIPLPEEAARAQMFRLHLGSTPHNLTDANIHELARKTEGYSGADISII 337
>PRS10_YEAST (P53549) 26S protease subunit RPT4 (26S protease subunit SUG2)| (Proteasomal cap subunit) Length = 437 Score = 43.1 bits (100), Expect = 7e-04 Identities = 24/62 (38%), Positives = 32/62 (51%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSGADITEICQRACKY 479 RLD+ + IPLP+ R +IFK K + D A K + GF+GADI A + Sbjct: 342 RLDRKVEIPLPNEAGRLEIFKIHTAKVKKTGEFDFEAAVKMSDGFNGADIRNCATEAGFF 401 Query: 478 AI 473 AI Sbjct: 402 AI 403
>FTSH_CAPAN (Q39444) Cell division protein ftsH homolog, chloroplast precursor| (EC 3.4.24.-) (Fragment) Length = 662 Score = 43.1 bits (100), Expect = 7e-04 Identities = 20/57 (35%), Positives = 32/57 (56%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSGADITEICQRA 488 + D+ + + PDV R +I + R LAKD+D +A+ T GF+GAD+ + A Sbjct: 390 KFDRQVTVDRPDVAGRVRILQVHSRGKALAKDVDFDKIARRTPGFTGADLQNLMNEA 446
>PRS8_DROME (O18413) 26S protease regulatory subunit 8| Length = 405 Score = 42.7 bits (99), Expect = 0.001 Identities = 22/62 (35%), Positives = 35/62 (56%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSGADITEICQRACKY 479 R+D+ I P P+ ++R I K RK L + I+L +A+ G SGA++ +C A Y Sbjct: 309 RIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMY 368 Query: 478 AI 473 A+ Sbjct: 369 AL 370
>PRS8_XENLA (P46470) 26S protease regulatory subunit 8 (SUG1 homolog) (xSUG1)| Length = 461 Score = 42.7 bits (99), Expect = 0.001 Identities = 22/62 (35%), Positives = 35/62 (56%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSGADITEICQRACKY 479 R+D+ I P P+ ++R I K RK L + I+L +A+ G SGA++ +C A Y Sbjct: 304 RIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMY 363 Query: 478 AI 473 A+ Sbjct: 364 AL 365
>PRS8_MANSE (P54814) 26S protease regulatory subunit 8 (18-56 protein)| Length = 402 Score = 42.7 bits (99), Expect = 0.001 Identities = 22/62 (35%), Positives = 35/62 (56%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSGADITEICQRACKY 479 R+D+ I P P+ ++R I K RK L + I+L +A+ G SGA++ +C A Y Sbjct: 306 RIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMY 365 Query: 478 AI 473 A+ Sbjct: 366 AL 367
>PRS8_RAT (P62198) 26S protease regulatory subunit 8 (Proteasome subunit p45)| (p45/SUG) (Proteasome 26S subunit ATPase 5) (Thyroid hormone receptor-interacting protein 1) (TRIP1) Length = 406 Score = 42.7 bits (99), Expect = 0.001 Identities = 22/62 (35%), Positives = 35/62 (56%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSGADITEICQRACKY 479 R+D+ I P P+ ++R I K RK L + I+L +A+ G SGA++ +C A Y Sbjct: 310 RIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMY 369 Query: 478 AI 473 A+ Sbjct: 370 AL 371
>PRS8_PIG (P62197) 26S protease regulatory subunit 8 (Proteasome subunit p45)| (p45/SUG) (Proteasome 26S subunit ATPase 5) (TAT-binding protein homolog 10) (TBP10) Length = 406 Score = 42.7 bits (99), Expect = 0.001 Identities = 22/62 (35%), Positives = 35/62 (56%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSGADITEICQRACKY 479 R+D+ I P P+ ++R I K RK L + I+L +A+ G SGA++ +C A Y Sbjct: 310 RIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMY 369 Query: 478 AI 473 A+ Sbjct: 370 AL 371
>PRS8_MOUSE (P62196) 26S protease regulatory subunit 8 (Proteasome subunit p45)| (p45/SUG) (Proteasome 26S subunit ATPase 5) (mSUG1) Length = 406 Score = 42.7 bits (99), Expect = 0.001 Identities = 22/62 (35%), Positives = 35/62 (56%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSGADITEICQRACKY 479 R+D+ I P P+ ++R I K RK L + I+L +A+ G SGA++ +C A Y Sbjct: 310 RIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMY 369 Query: 478 AI 473 A+ Sbjct: 370 AL 371
>PRS8_HUMAN (P62195) 26S protease regulatory subunit 8 (Proteasome subunit p45)| (p45/SUG) (Proteasome 26S subunit ATPase 5) (Thyroid hormone receptor-interacting protein 1) (TRIP1) Length = 406 Score = 42.7 bits (99), Expect = 0.001 Identities = 22/62 (35%), Positives = 35/62 (56%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSGADITEICQRACKY 479 R+D+ I P P+ ++R I K RK L + I+L +A+ G SGA++ +C A Y Sbjct: 310 RIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMY 369 Query: 478 AI 473 A+ Sbjct: 370 AL 371
>PRS8_BOVIN (P62194) 26S protease regulatory subunit 8 (Proteasome subunit p45)| (p45/SUG) (Proteasome 26S subunit ATPase 5) Length = 406 Score = 42.7 bits (99), Expect = 0.001 Identities = 22/62 (35%), Positives = 35/62 (56%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSGADITEICQRACKY 479 R+D+ I P P+ ++R I K RK L + I+L +A+ G SGA++ +C A Y Sbjct: 310 RIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMY 369 Query: 478 AI 473 A+ Sbjct: 370 AL 371
>FTSH_MEDSA (Q9BAE0) Cell division protein ftsH homolog, chloroplast precursor| (EC 3.4.24.-) Length = 706 Score = 42.7 bits (99), Expect = 0.001 Identities = 20/57 (35%), Positives = 31/57 (54%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSGADITEICQRA 488 R D+ + + PDV R +I + R LAKD+D +A+ T GF+G D+ + A Sbjct: 413 RFDRQVTVDRPDVAGRVKILQVHSRGKALAKDVDFDKIARRTPGFTGVDLQNLMNEA 469
>PRS6B_ENCCU (Q8SQI9) 26S protease regulatory subunit 6B homolog| Length = 387 Score = 42.4 bits (98), Expect = 0.001 Identities = 23/62 (37%), Positives = 31/62 (50%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSGADITEICQRACKY 479 RLD+ I PLPD + +F A K L +D+ +L + S ADI ICQ A Sbjct: 295 RLDRKIEFPLPDRRQKRLVFNAITSKMSLNDSVDIESLVCRPEKISCADINSICQEAGML 354 Query: 478 AI 473 A+ Sbjct: 355 AV 356
>PRS6B_MOUSE (P54775) 26S protease regulatory subunit 6B (MIP224)| (MB67-interacting protein) (TAT-binding protein 7) (TBP-7) (CIP21) Length = 418 Score = 42.4 bits (98), Expect = 0.001 Identities = 22/55 (40%), Positives = 28/55 (50%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSGADITEICQ 494 RLD+ I PLPD + IF K L++++DL SGADI ICQ Sbjct: 326 RLDRKIEFPLPDRRQKRLIFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQ 380
>FTSH1_ARATH (Q39102) Cell division protein ftsH homolog 1, chloroplast| precursor (EC 3.4.24.-) Length = 716 Score = 42.4 bits (98), Expect = 0.001 Identities = 20/57 (35%), Positives = 31/57 (54%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSGADITEICQRA 488 R D+ + + PDV R +I + R L KD+D +A+ T GF+GAD+ + A Sbjct: 422 RFDRQVTVDRPDVAGRVKILQVHSRGKALGKDVDFDKVARRTPGFTGADLQNLMNEA 478
>FTSH_MYCTU (P0A4V8) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 760 Score = 42.4 bits (98), Expect = 0.001 Identities = 20/57 (35%), Positives = 30/57 (52%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSGADITEICQRA 488 R D+ I + PD+ R + + + P+A D DL LAK T G +GAD+ + A Sbjct: 323 RFDRQIPVSNPDLAGRRAVLRVHSKGKPMAADADLDGLAKRTVGMTGADLANVINEA 379
>FTSH_MYCBO (P0A4V9) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 760 Score = 42.4 bits (98), Expect = 0.001 Identities = 20/57 (35%), Positives = 30/57 (52%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSGADITEICQRA 488 R D+ I + PD+ R + + + P+A D DL LAK T G +GAD+ + A Sbjct: 323 RFDRQIPVSNPDLAGRRAVLRVHSKGKPMAADADLDGLAKRTVGMTGADLANVINEA 379
>FTSH_MYCLE (Q9CD58) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 787 Score = 42.4 bits (98), Expect = 0.001 Identities = 20/57 (35%), Positives = 30/57 (52%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSGADITEICQRA 488 R D+ I + PD+ R + + + P+A D DL LAK T G +GAD+ + A Sbjct: 323 RFDRQIPVSNPDLAGRRAVLRVHSKGKPIADDADLDGLAKRTVGMTGADLANVVNEA 379
>PRS8_SCHPO (P41836) 26S protease regulatory subunit 8 homolog (Protein let1)| Length = 403 Score = 42.4 bits (98), Expect = 0.001 Identities = 20/62 (32%), Positives = 35/62 (56%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSGADITEICQRACKY 479 R+D+ I P P ++R +I + R L + IDL ++A+ G SGA++ +C A + Sbjct: 307 RIDRKIEFPPPSAEARAEILRIHSRSMNLTRGIDLKSIAEKMNGASGAELKGVCTEAGMF 366 Query: 478 AI 473 A+ Sbjct: 367 AL 368
>PRS4_CHICK (Q90732) 26S protease regulatory subunit 4 (P26s4) (Proteasome 26S| subunit ATPase 1) Length = 440 Score = 42.0 bits (97), Expect = 0.002 Identities = 22/57 (38%), Positives = 30/57 (52%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSGADITEICQRA 488 R+D+ I PLPD ++ +IF+ + LA D+ L L SGADI IC A Sbjct: 346 RIDRKIEFPLPDEKTKKRIFQIHTSRMTLADDVTLDELIMAKDDLSGADIKAICTEA 402
>MSP1_CAEEL (P54815) Protein MSP1 homolog| Length = 342 Score = 42.0 bits (97), Expect = 0.002 Identities = 17/57 (29%), Positives = 31/57 (54%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSGADITEICQRA 488 R+ +P+P+ R QI LR + ++L +A+ +G SG+D+ E+C+ A Sbjct: 240 RMTARFQVPVPNAKQRSQILNVILRNEKINNTVNLGEIAQAAEGLSGSDLKEVCRLA 296
>FTSH_GUITH (O78516) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 631 Score = 42.0 bits (97), Expect = 0.002 Identities = 21/57 (36%), Positives = 29/57 (50%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSGADITEICQRA 488 R D+ + + +PDV R +I R L I L +AK T GFSGAD+ + A Sbjct: 333 RFDRQVTVDVPDVKGRLEILNVHARNKKLDLSISLELIAKRTPGFSGADLANLLNEA 389
>FTSH_TOBAC (O82150) Cell division protein ftsH homolog, chloroplast precursor| (EC 3.4.24.-) (DS9) Length = 714 Score = 41.6 bits (96), Expect = 0.002 Identities = 19/57 (33%), Positives = 31/57 (54%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSGADITEICQRA 488 R D+ + + PDV R +I + R L KD+D +A+ T G++GAD+ + A Sbjct: 413 RFDRQVTVDRPDVAGRIKILQVHSRGKALTKDVDFEKIARRTPGYTGADLQNLMNEA 469
>YMEL1_HUMAN (Q96TA2) ATP-dependent metalloprotease YME1L1 (EC 3.4.24.-)| (YME1-like protein 1) (ATP-dependent metalloprotease FtsH1) (Meg-4) (Presenilin-associated metalloprotease) (PAMP) Length = 773 Score = 41.6 bits (96), Expect = 0.002 Identities = 20/57 (35%), Positives = 31/57 (54%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSGADITEICQRA 488 R D + +P PDV R +I K L K + +D +A+ T GFSGA++ + +A Sbjct: 497 RFDMQVTVPRPDVKGRTEILKWYLNKIKFDQSVDPEIIARGTVGFSGAELENLVNQA 553
>PRS4_RAT (P62193) 26S protease regulatory subunit 4 (P26s4) (Proteasome 26S| subunit ATPase 1) Length = 440 Score = 41.6 bits (96), Expect = 0.002 Identities = 22/57 (38%), Positives = 30/57 (52%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSGADITEICQRA 488 R+D+ I PLPD ++ +IF+ + LA D+ L L SGADI IC A Sbjct: 346 RIDRKIEFPLPDEKTKKRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEA 402
>PRS4_MOUSE (P62192) 26S protease regulatory subunit 4 (P26s4) (Proteasome 26S| subunit ATPase 1) Length = 440 Score = 41.6 bits (96), Expect = 0.002 Identities = 22/57 (38%), Positives = 30/57 (52%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSGADITEICQRA 488 R+D+ I PLPD ++ +IF+ + LA D+ L L SGADI IC A Sbjct: 346 RIDRKIEFPLPDEKTKKRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEA 402
>PRS4_HUMAN (P62191) 26S protease regulatory subunit 4 (P26s4) (Proteasome 26S| subunit ATPase 1) Length = 440 Score = 41.6 bits (96), Expect = 0.002 Identities = 22/57 (38%), Positives = 30/57 (52%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSGADITEICQRA 488 R+D+ I PLPD ++ +IF+ + LA D+ L L SGADI IC A Sbjct: 346 RIDRKIEFPLPDEKTKKRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEA 402
>FTSH_MYCGE (P47695) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 702 Score = 41.2 bits (95), Expect = 0.003 Identities = 23/62 (37%), Positives = 30/62 (48%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSGADITEICQRACKY 479 R D+ I I LPD+ R I K L+ I L +AK T GFSGA + + A Sbjct: 391 RFDRHIQINLPDIKEREGILKVHAENKNLSSKISLLDVAKRTPGFSGAQLENVINEATLL 450 Query: 478 AI 473 A+ Sbjct: 451 AV 452
>PSMR1_HALSA (Q9HNP9) Proteasome-activating nucleotidase 1 (Proteasome| regulatory subunit 1) Length = 411 Score = 41.2 bits (95), Expect = 0.003 Identities = 22/62 (35%), Positives = 34/62 (54%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSGADITEICQRACKY 479 R D+LI +P P+ D+R +I + + +A +D S LA T FSGA + + A + Sbjct: 313 RFDRLIEVPNPNPDARERILEIHAGEMNVADSVDFSDLAADTAEFSGAQLASLATEAGMF 372 Query: 478 AI 473 AI Sbjct: 373 AI 374
>PRS6A_YEAST (P33297) 26S protease regulatory subunit 6A (TAT-binding protein| homolog 1) (TBP-1) Length = 434 Score = 40.8 bits (94), Expect = 0.004 Identities = 24/62 (38%), Positives = 32/62 (51%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSGADITEICQRACKY 479 RLD+ I PLP DSR QI + RK DI+ LA+ T F+GA + + A Sbjct: 342 RLDRKIEFPLPSEDSRAQILQIHSRKMTTDDDINWQELARSTDEFNGAQLKAVTVEAGMI 401 Query: 478 AI 473 A+ Sbjct: 402 AL 403
>RCA1_YEAST (P40341) Mitochondrial respiratory chain complexes assembly protein| RCA1 (EC 3.4.24.-) (TAT-binding homolog 12) Length = 825 Score = 40.8 bits (94), Expect = 0.004 Identities = 27/63 (42%), Positives = 34/63 (53%), Gaps = 2/63 (3%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDI-DL-SALAKYTQGFSGADITEICQRAC 485 R D+ I I P+++ R IF L LA +I DL + LA T GFSGADI +C A Sbjct: 509 RFDRHINIDKPELEGRKAIFAVHLHHLKLAGEIFDLKNRLAALTPGFSGADIANVCNEAA 568 Query: 484 KYA 476 A Sbjct: 569 LIA 571
>PRS6A_RAT (Q63569) 26S protease regulatory subunit 6A (TAT-binding protein 1)| (TBP-1) (Spermatogenic cell/sperm-associated TAT-binding protein homolog SATA) Length = 439 Score = 40.8 bits (94), Expect = 0.004 Identities = 20/62 (32%), Positives = 35/62 (56%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSGADITEICQRACKY 479 RLD+ I P+P+ ++R +I + RK ++ D++ LA+ T F+GA +C A Sbjct: 347 RLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMI 406 Query: 478 AI 473 A+ Sbjct: 407 AL 408
>PRS6A_HUMAN (P17980) 26S protease regulatory subunit 6A (TAT-binding protein 1)| (TBP-1) (Proteasome subunit P50) Length = 439 Score = 40.8 bits (94), Expect = 0.004 Identities = 20/62 (32%), Positives = 35/62 (56%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSGADITEICQRACKY 479 RLD+ I P+P+ ++R +I + RK ++ D++ LA+ T F+GA +C A Sbjct: 347 RLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMI 406 Query: 478 AI 473 A+ Sbjct: 407 AL 408
>SAP1_YEAST (P39955) Protein SAP1| Length = 897 Score = 40.8 bits (94), Expect = 0.004 Identities = 23/53 (43%), Positives = 32/53 (60%), Gaps = 2/53 (3%) Frame = -1 Query: 640 YIPLPDVDSRHQIFKACL--RKSPLAKDIDLSALAKYTQGFSGADITEICQRA 488 YIPLP+ +RH FK L +K L + D L K T+G+SG+DIT + + A Sbjct: 787 YIPLPEDQTRHVQFKKLLSHQKHTLTES-DFDELVKITEGYSGSDITSLAKDA 838
>NVL_MOUSE (Q9DBY8) Nuclear valosin-containing protein-like (Nuclear VCP-like| protein) (NVLp) Length = 855 Score = 40.8 bits (94), Expect = 0.004 Identities = 20/62 (32%), Positives = 33/62 (53%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSGADITEICQRACKY 479 R D+ + + +PD +R +I + RK L + + LA T GF GAD+ +C+ A Sbjct: 424 RFDREVCLGIPDEAARERILQTLCRKLRLPETFNFCHLAHLTPGFVGADLMALCREAAMC 483 Query: 478 AI 473 A+ Sbjct: 484 AV 485
>FTSH2_SYNY3 (P73179) Cell division protein ftsH homolog 2 (EC 3.4.24.-)| Length = 665 Score = 40.8 bits (94), Expect = 0.004 Identities = 18/57 (31%), Positives = 31/57 (54%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSGADITEICQRA 488 R D+ + + PDV R I + L +++ L+A+A+ T GF+GAD+ + A Sbjct: 371 RFDRQVTVDYPDVQGRELILAIHAQNKKLHEEVQLAAIARRTPGFTGADLANVLNEA 427
>PRS6A_MOUSE (O88685) 26S protease regulatory subunit 6A (TAT-binding protein 1)| (TBP-1) Length = 442 Score = 40.4 bits (93), Expect = 0.005 Identities = 20/62 (32%), Positives = 35/62 (56%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSGADITEICQRACKY 479 RLD+ I P+P+ ++R +I + RK ++ D++ LA+ T F+GA +C A Sbjct: 350 RLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQSKAVCVEAGMI 409 Query: 478 AI 473 A+ Sbjct: 410 AL 411
>PR6AB_XENLA (O42586) 26S protease regulatory subunit 6A-B (TAT-binding protein| 10) (TBP-10) Length = 404 Score = 40.4 bits (93), Expect = 0.005 Identities = 19/57 (33%), Positives = 33/57 (57%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSGADITEICQRA 488 RLD+ I P+P+ ++R +I + RK ++ D++ LA+ T F+GA +C A Sbjct: 312 RLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEA 368
>FTSH_MYCPN (P75120) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 709 Score = 40.4 bits (93), Expect = 0.005 Identities = 22/62 (35%), Positives = 31/62 (50%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSGADITEICQRACKY 479 R D+ I I LPD+ R I + + L+ I L +AK T GFSGA + + A Sbjct: 388 RFDRHIQINLPDIKEREGILQVHAKNKNLSSKISLLDVAKRTPGFSGAQLENVINEATLL 447 Query: 478 AI 473 A+ Sbjct: 448 AV 449
>VPS4_SCHPO (Q09803) Suppressor protein of bem1/bed5 double mutants| Length = 432 Score = 40.4 bits (93), Expect = 0.005 Identities = 22/58 (37%), Positives = 35/58 (60%), Gaps = 1/58 (1%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRHQIFKACLRKSPL-AKDIDLSALAKYTQGFSGADITEICQRA 488 R ++ IYIPLP+ +R ++F+ + K P D LAK T G+SG+DI+ + + A Sbjct: 285 RFEKRIYIPLPNAHARARMFELNVGKIPSELTSQDFKELAKMTDGYSGSDISIVVRDA 342
>ATAD1_RAT (Q505J9) ATPase family AAA domain-containing protein 1| Length = 361 Score = 40.0 bits (92), Expect = 0.006 Identities = 19/57 (33%), Positives = 32/57 (56%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSGADITEICQRA 488 R+ +I P + R I K L+ + + +DL +A+ T GFSG+D+ E+C+ A Sbjct: 250 RMPTRFHINQPALKQREAILKLILKNENVDRHVDLLEVAQETDGFSGSDLKEMCRDA 306
>ATAD1_MOUSE (Q9D5T0) ATPase family AAA domain-containing protein 1| Length = 361 Score = 40.0 bits (92), Expect = 0.006 Identities = 19/57 (33%), Positives = 32/57 (56%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSGADITEICQRA 488 R+ +I P + R I K L+ + + +DL +A+ T GFSG+D+ E+C+ A Sbjct: 250 RMPTRFHINQPALKQREAILKLILKNENVDRHVDLLEVAQETDGFSGSDLKEMCRDA 306
>ATAD1_HUMAN (Q8NBU5) ATPase family AAA domain-containing protein 1| Length = 361 Score = 40.0 bits (92), Expect = 0.006 Identities = 19/57 (33%), Positives = 32/57 (56%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSGADITEICQRA 488 R+ +I P + R I K L+ + + +DL +A+ T GFSG+D+ E+C+ A Sbjct: 250 RMPTRFHINQPALKQREAILKLILKNENVDRHVDLLEVAQETDGFSGSDLKEMCRDA 306
>FTSH3_SYNY3 (P73437) Cell division protein ftsH homolog 3 (EC 3.4.24.-)| Length = 628 Score = 40.0 bits (92), Expect = 0.006 Identities = 19/61 (31%), Positives = 33/61 (54%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSGADITEICQRACKY 479 R D+ + + PD+ R +I + +K L K+++L +A T GF+GAD+ + A Sbjct: 336 RFDRQVLVDRPDLAGRLKILEIYAKKIKLDKEVELKNIATRTPGFAGADLANLVNEAALL 395 Query: 478 A 476 A Sbjct: 396 A 396
>PRS4_CAEEL (O16368) Probable 26S protease regulatory subunit 4| Length = 443 Score = 39.3 bits (90), Expect = 0.010 Identities = 19/57 (33%), Positives = 30/57 (52%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSGADITEICQRA 488 R+D+ I PLPD ++ +IF+ + L K+++L SGADI +C A Sbjct: 349 RIDRKIEFPLPDEKTKRRIFQIHTSRMTLGKEVNLEEFITAKDELSGADIKAMCTEA 405
>VPS4_YEAST (P52917) Vacuolar protein sorting-associated protein VPS4 (END13| protein) (DOA4-independent degradation protein 6) Length = 437 Score = 38.9 bits (89), Expect = 0.014 Identities = 22/59 (37%), Positives = 36/59 (61%), Gaps = 2/59 (3%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRHQIFKACLRKSP--LAKDIDLSALAKYTQGFSGADITEICQRA 488 R ++ IYIPLPD+ +R +F+ + +P L K+ D L T+G+SG+DI + + A Sbjct: 289 RFERRIYIPLPDLAARTTMFEINVGDTPCVLTKE-DYRTLGAMTEGYSGSDIAVVVKDA 346
>PRS7_CAEEL (Q18787) Probable 26S protease regulatory subunit 7| Length = 435 Score = 38.9 bits (89), Expect = 0.014 Identities = 20/62 (32%), Positives = 32/62 (51%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSGADITEICQRACKY 479 RLD+ + LPD+ R I K ++ + +DI LA+ +GA+I +C A + Sbjct: 338 RLDRKVEFALPDLAGRAHILKIHAKQMSVERDIRYDLLARLCPNSTGAEIRSVCTEAGMF 397 Query: 478 AI 473 AI Sbjct: 398 AI 399
>FTSH_RICPR (Q9ZEA2) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 637 Score = 38.9 bits (89), Expect = 0.014 Identities = 20/61 (32%), Positives = 31/61 (50%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSGADITEICQRACKY 479 R D+ I + PD++ R QI K L+K + +A+ T GFSGA++ + A Sbjct: 315 RFDRQIAVANPDINGREQILKVHLKKIKYNSTVLARIIARGTPGFSGAELANLVNEAALI 374 Query: 478 A 476 A Sbjct: 375 A 375
>FTSH_RICCN (Q92JJ9) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 637 Score = 38.9 bits (89), Expect = 0.014 Identities = 20/61 (32%), Positives = 31/61 (50%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSGADITEICQRACKY 479 R D+ I + PD++ R QI K L+K + +A+ T GFSGA++ + A Sbjct: 315 RFDRQIAVANPDINGREQILKVHLKKIKYNSTVLARIIARGTPGFSGAELANLVNEAALI 374 Query: 478 A 476 A Sbjct: 375 A 375
>AFG3_YEAST (P39925) Mitochondrial respiratory chain complexes assembly protein| AFG3 (EC 3.4.24.-) (TAT-binding homolog 10) Length = 761 Score = 38.9 bits (89), Expect = 0.014 Identities = 28/67 (41%), Positives = 35/67 (52%), Gaps = 6/67 (8%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRHQIFKACLRK---SPLAKDI--DLSA-LAKYTQGFSGADITEIC 497 R D+ I I PDV+ R QI+ L++ PL D +LS LA T GF+GADI C Sbjct: 450 RFDRHIQIDSPDVNGRQQIYLVHLKRLNLDPLLTDDMNNLSGKLATLTPGFTGADIANAC 509 Query: 496 QRACKYA 476 A A Sbjct: 510 NEAALIA 516
>ATAD2_MOUSE (Q8CDM1) ATPase family AAA domain-containing protein 2| Length = 1040 Score = 38.9 bits (89), Expect = 0.014 Identities = 23/63 (36%), Positives = 33/63 (52%), Gaps = 1/63 (1%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRHQIFKACLRK-SPLAKDIDLSALAKYTQGFSGADITEICQRACK 482 R D+ LPD ++R +I K R +P D+ L LA++ G+ GADI IC A Sbjct: 244 RFDREFLFSLPDKNARKEILKIHTRDWNPKPVDMFLEELAEHCVGYCGADIKSICAEAAL 303 Query: 481 YAI 473 A+ Sbjct: 304 CAL 306
>PEX6_YEAST (P33760) Peroxisomal biogenesis factor 6 (Peroxin-6) (Peroxisome| biosynthesis protein PAS8) Length = 1030 Score = 38.9 bits (89), Expect = 0.014 Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 2/59 (3%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRH-QIFKACLRKSPLAKDIDLSALAKYTQ-GFSGADITEICQRA 488 R D+L+Y+ +PD D++ I +A RK L D+ L LAK ++GAD +C A Sbjct: 892 RFDKLLYLGIPDTDTKQLNILEALTRKFVLDNDVKLIELAKLCPFNYTGADFYALCSDA 950
>YME1_CAEEL (P54813) Protein YME1 homolog (EC 3.4.24.-)| Length = 676 Score = 38.9 bits (89), Expect = 0.014 Identities = 22/57 (38%), Positives = 30/57 (52%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSGADITEICQRA 488 R D + +P PD+ R IF L K + ID LAK + GF+GADI + +A Sbjct: 359 RFDVRVTVPKPDLAGRVDIFNFYLSKIVHSGGIDPKVLAKGSTGFTGADIENMVNQA 415
>SEC18_CANAL (P34732) Vesicular-fusion protein SEC18| Length = 794 Score = 38.5 bits (88), Expect = 0.018 Identities = 23/66 (34%), Positives = 32/66 (48%), Gaps = 4/66 (6%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRHQIF----KACLRKSPLAKDIDLSALAKYTQGFSGADITEICQR 491 R + I I LPD R IF K L+ D++ L+ T+ F+GA+I +C Sbjct: 446 RFEIQIEISLPDEKGRKDIFLIHTKKLTENGILSSDVNFDELSTLTKNFTGAEIEGLCNS 505 Query: 490 ACKYAI 473 A YAI Sbjct: 506 AKSYAI 511
>VPS4B_MOUSE (P46467) Vacuolar sorting protein 4b (SKD1 protein)| Length = 444 Score = 38.1 bits (87), Expect = 0.023 Identities = 21/58 (36%), Positives = 34/58 (58%), Gaps = 1/58 (1%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRHQIFKACLRKSPLA-KDIDLSALAKYTQGFSGADITEICQRA 488 R ++ IYIPLP+ +R +F+ L + + + D L + T G+SGADI+ I + A Sbjct: 291 RFEKRIYIPLPEAHARAAMFRLHLGSTQNSLTEADFQELGRKTDGYSGADISIIVRDA 348
>PRS6A_SCHPO (O14126) 26S protease regulatory subunit 6A| Length = 438 Score = 38.1 bits (87), Expect = 0.023 Identities = 20/62 (32%), Positives = 34/62 (54%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSGADITEICQRACKY 479 RLD+ + PLP+ ++R I + RK + DI+ LA+ T ++GA + +C A Sbjct: 346 RLDRKLEFPLPNEEARVGILRIHSRKMAIDDDINWEELARSTDEYNGAMLKSVCVEAGMI 405 Query: 478 AI 473 A+ Sbjct: 406 AL 407
>PRS8_DICDI (P34124) 26S protease regulatory subunit 8 (TAT-binding protein| homolog 10) (Fragment) Length = 389 Score = 38.1 bits (87), Expect = 0.023 Identities = 21/62 (33%), Positives = 31/62 (50%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSGADITEICQRACKY 479 R+D+ I P P R I K RK L + I+L ++ G SGA++ +C A Y Sbjct: 293 RIDRKIEFPNPGDAGRLDILKIHSRKMNLTRGINLKKISDKMNGASGAELKAVCTEAGMY 352 Query: 478 AI 473 A+ Sbjct: 353 AL 354
>VPS4B_HUMAN (O75351) Vacuolar sorting protein 4b (SKD1 protein)| Length = 444 Score = 37.7 bits (86), Expect = 0.030 Identities = 22/58 (37%), Positives = 34/58 (58%), Gaps = 1/58 (1%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRHQIFKACLRKSPLA-KDIDLSALAKYTQGFSGADITEICQRA 488 R ++ IYIPLP+ +R +FK L + + + D L + T G+SGADI+ I + A Sbjct: 291 RFEKRIYIPLPEPHARAAMFKLHLGTTQNSLTEADFRELGRKTDGYSGADISIIVRDA 348
>NSF_ARATH (Q9M0Y8) Vesicle-fusing ATPase (EC 3.6.4.6) (Vesicular-fusion| protein NSF) (N-ethylmaleimide sensitive fusion protein) Length = 742 Score = 37.4 bits (85), Expect = 0.040 Identities = 24/66 (36%), Positives = 35/66 (53%), Gaps = 4/66 (6%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRHQIFKACLRK----SPLAKDIDLSALAKYTQGFSGADITEICQR 491 RL+ + I LPD R QI + K S L DI+L LA T+ +SGA++ + + Sbjct: 385 RLEVQVEISLPDEAGRLQILQIHTNKMKENSFLGTDINLQELAARTKNYSGAELEGVVKS 444 Query: 490 ACKYAI 473 A YA+ Sbjct: 445 ATSYAL 450
>PEX1_YEAST (P24004) Peroxisome biosynthesis protein PAS1 (Peroxin-1)| Length = 1043 Score = 37.4 bits (85), Expect = 0.040 Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 9/66 (13%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRHQIFKACL---------RKSPLAKDIDLSALAKYTQGFSGADIT 506 RLD+ + +P R I +A + +K L K+ DL +A+ T GFSGAD+ Sbjct: 855 RLDKSVICNIPTESERLDILQAIVNSKDKDTGQKKFALEKNADLKLIAEKTAGFSGADLQ 914 Query: 505 EICQRA 488 +C A Sbjct: 915 GLCYNA 920
>ATAD2_PONPY (Q5RDX4) ATPase family AAA domain-containing protein 2| Length = 1091 Score = 37.0 bits (84), Expect = 0.052 Identities = 23/63 (36%), Positives = 31/63 (49%), Gaps = 1/63 (1%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRHQIFKACLRK-SPLAKDIDLSALAKYTQGFSGADITEICQRACK 482 R D+ LPD ++R +I K R +P D L LA+ G+ GADI IC A Sbjct: 420 RFDREFLFSLPDKEARKEILKIHTRDWNPKPLDTFLEELAENCVGYRGADIKSICAEAAL 479 Query: 481 YAI 473 A+ Sbjct: 480 CAL 482
>SEC18_SCHPO (Q9P7Q4) Vesicular-fusion protein SEC18 homolog| Length = 792 Score = 37.0 bits (84), Expect = 0.052 Identities = 23/65 (35%), Positives = 33/65 (50%), Gaps = 4/65 (6%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRHQIFKACLRKSP----LAKDIDLSALAKYTQGFSGADITEICQR 491 RL+ + I LPD R QI K + L D+D+ LA T+ FSGA+I + + Sbjct: 439 RLEVHMEISLPDEHGRLQILKIHTSRMASNGILENDVDMEELASLTKNFSGAEIAGLIKS 498 Query: 490 ACKYA 476 A +A Sbjct: 499 ASSFA 503
>ATAD2_HUMAN (Q6PL18) ATPase family AAA domain-containing protein 2| Length = 1390 Score = 37.0 bits (84), Expect = 0.052 Identities = 23/63 (36%), Positives = 31/63 (49%), Gaps = 1/63 (1%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRHQIFKACLRK-SPLAKDIDLSALAKYTQGFSGADITEICQRACK 482 R D+ LPD ++R +I K R +P D L LA+ G+ GADI IC A Sbjct: 589 RFDREFLFSLPDKEARKEILKIHTRDWNPKPLDTFLEELAENCVGYCGADIKSICAEAAL 648 Query: 481 YAI 473 A+ Sbjct: 649 CAL 651
>PRS7_SCHPO (O42931) 26S protease regulatory subunit 7 homolog| Length = 438 Score = 36.6 bits (83), Expect = 0.068 Identities = 17/62 (27%), Positives = 32/62 (51%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSGADITEICQRACKY 479 R+D+ + LPD++ R I + + + KDI +A+ +GA++ +C A + Sbjct: 340 RIDRKVEFGLPDLEGRAHILRIHAKSMAIDKDIRWELIARLCPSQTGAELRSVCTEAGMF 399 Query: 478 AI 473 AI Sbjct: 400 AI 401
>FTSH_PORPU (P51327) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 628 Score = 36.6 bits (83), Expect = 0.068 Identities = 16/57 (28%), Positives = 28/57 (49%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSGADITEICQRA 488 R D+ + + +PD R I + + + + L +A+ T GFSGAD+ + A Sbjct: 333 RFDRQVSVDVPDFRGRLAILEVHAKNKKMESKVSLETIARRTPGFSGADLANLLNEA 389
>PRS4_YEAST (P40327) 26S protease regulatory subunit 4 homolog (TAT-binding| homolog 5) Length = 437 Score = 35.4 bits (80), Expect = 0.15 Identities = 18/57 (31%), Positives = 29/57 (50%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSGADITEICQRA 488 R+D+ I PD+ ++ +I K L++D++L L SGADI +C A Sbjct: 343 RIDRKILFENPDLSTKKKILGIHTSKMNLSEDVNLETLVTTKDDLSGADIQAMCTEA 399
>YME1_SCHMA (P46508) Protein YME1 homolog (EC 3.4.24.-)| Length = 662 Score = 35.4 bits (80), Expect = 0.15 Identities = 18/57 (31%), Positives = 29/57 (50%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSGADITEICQRA 488 R D I++ P + R + L+K +ID+ LA T G++GADI + +A Sbjct: 324 RFDVQIHVSPPTYEGRIALLNLYLKKVKTGSNIDIEKLAHGTVGYTGADIQNLVNQA 380
>YCF46_ODOSI (P49541) Hypothetical 56.9 kDa protein ycf46 (ORF497)| Length = 497 Score = 35.0 bits (79), Expect = 0.20 Identities = 17/54 (31%), Positives = 33/54 (61%), Gaps = 2/54 (3%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRHQIFKACLR--KSPLAKDIDLSALAKYTQGFSGADITE 503 R D++ ++ LP+++ R +IFK ++ + K D LA+ ++ FSGA+I + Sbjct: 382 RFDEIFFLDLPELEERKEIFKIHIQEFRPNSWKLFDYKKLAQLSESFSGAEIRQ 435
>RIX7_YEAST (Q07844) Ribosome biogenesis ATPase RIX7| Length = 837 Score = 34.7 bits (78), Expect = 0.26 Identities = 18/66 (27%), Positives = 36/66 (54%), Gaps = 4/66 (6%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRHQIFKACLRK--SPLAKDIDLSALAKYTQ--GFSGADITEICQR 491 RLD+ ++I LP+ + + I K + +PL+ D+D + + + FSGAD+ + + Sbjct: 691 RLDKSLFIELPNTEEKLDIIKTLTKSHGTPLSSDVDFEEIIRNEKCNNFSGADLAALVRE 750 Query: 490 ACKYAI 473 + A+ Sbjct: 751 SSVLAL 756 Score = 33.1 bits (74), Expect = 0.75 Identities = 22/62 (35%), Positives = 30/62 (48%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSGADITEICQRACKY 479 R D+ I + +P+ SR I K + ID + LAK T GF GAD+ + A Sbjct: 368 RFDREICLNVPNEVSRLHILKKMSDNLKIDGAIDFAKLAKLTPGFVGADLKALVTAAGTC 427 Query: 478 AI 473 AI Sbjct: 428 AI 429
>PRS2_METJA (Q58889) Putative 26S protease regulatory subunit homolog MJ1494| Length = 371 Score = 34.7 bits (78), Expect = 0.26 Identities = 18/52 (34%), Positives = 28/52 (53%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSGADITE 503 R ++ I LP+ + R +I + +K PL +L + T+GFSG DI E Sbjct: 277 RFEEEIEFKLPNDEERLKIMELYAKKMPLPVKANLKEFVEKTKGFSGRDIKE 328
>YCF46_GUITH (O78439) Hypothetical 57.8 kDa protein ycf46| Length = 506 Score = 34.3 bits (77), Expect = 0.34 Identities = 23/63 (36%), Positives = 32/63 (50%), Gaps = 2/63 (3%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRHQIFKACLRK-SPLA-KDIDLSALAKYTQGFSGADITEICQRAC 485 R D++ +I LPD+ R IFK L+K P + D L+ + FSGA+I E A Sbjct: 398 RFDEVFFIGLPDLKERECIFKVHLKKIRPKSWSTYDTEILSAQSNRFSGAEIEESIYEAM 457 Query: 484 KYA 476 A Sbjct: 458 HIA 460
>PRS7_YEAST (P33299) 26S protease regulatory subunit 7 homolog (CIM5 protein)| (TAT-binding homolog 3) Length = 467 Score = 34.3 bits (77), Expect = 0.34 Identities = 15/62 (24%), Positives = 32/62 (51%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSGADITEICQRACKY 479 R+D+ + LPD++ R IF+ + + + I +++ +GA++ +C A + Sbjct: 370 RIDRKVEFSLPDLEGRANIFRIHSKSMSVERGIRWELISRLCPNSTGAELRSVCTEAGMF 429 Query: 478 AI 473 AI Sbjct: 430 AI 431
>PRS6B_ASPNG (P78578) 26S protease regulatory subunit 6B homolog| Length = 423 Score = 32.3 bits (72), Expect = 1.3 Identities = 22/58 (37%), Positives = 28/58 (48%), Gaps = 1/58 (1%) Frame = -1 Query: 658 RLDQLIYIP-LPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSGADITEICQRA 488 RLD+ I P L D R IF K L+ ++DL +L + SGA I I Q A Sbjct: 327 RLDRKIEFPSLRDRRERRLIFSTIASKMSLSPEVDLDSLIVRNEPLSGAVIAAIMQEA 384
>ROK1_CANGA (Q6FN65) ATP-dependent RNA helicase ROK1 (EC 3.6.1.-)| Length = 565 Score = 32.3 bits (72), Expect = 1.3 Identities = 20/49 (40%), Positives = 29/49 (59%), Gaps = 1/49 (2%) Frame = +2 Query: 512 ISTAESLGVLGQSTEINILGQR-RLPEASFEDLVPRVDIRKRDVDKLIK 655 I+T E L +S + NI G+ LP SFEDL+ R + KR ++ LI+ Sbjct: 93 ITTKEQASALRKSYKGNITGEDIPLPIGSFEDLISRFSLDKRLLNNLIE 141
>NSF_CAEEL (Q94392) Vesicle-fusing ATPase (EC 3.6.4.6) (Vesicular-fusion| protein NSF) (N-ethylmaleimide sensitive fusion protein) (NEM-sensitive fusion protein) Length = 824 Score = 31.6 bits (70), Expect = 2.2 Identities = 20/61 (32%), Positives = 36/61 (59%), Gaps = 4/61 (6%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRHQIFK---ACLRK-SPLAKDIDLSALAKYTQGFSGADITEICQR 491 RL+ + + LPD R QI K A +R+ + + ++DL ++K T+ FSGA++ + + Sbjct: 465 RLEVQMEVSLPDETGRLQILKIHTARMREYNKMDPNVDLEDISKRTKNFSGAELEGLVRA 524 Query: 490 A 488 A Sbjct: 525 A 525
>SO2A1_MOUSE (Q9EPT5) Solute carrier organic anion transporter family member 2A1| (Solute carrier family 21 member 2) (Prostaglandin transporter) (PGT) Length = 643 Score = 30.8 bits (68), Expect = 3.7 Identities = 17/39 (43%), Positives = 17/39 (43%), Gaps = 5/39 (12%) Frame = -3 Query: 374 GCPLRGVDEVCPPECERRRHPQVPG-----LCPDSAAVP 273 GC V EV PP HPQ P LCPDS P Sbjct: 418 GCSTPAVAEVYPPSTPSSIHPQPPACRRDCLCPDSVFHP 456
>NSF2_DROME (P54351) Vesicular-fusion protein Nsf2 (N-ethylmaleimide-sensitive| fusion protein 2) (NEM-sensitive fusion protein 2) (dNsf-2) Length = 752 Score = 30.4 bits (67), Expect = 4.9 Identities = 18/61 (29%), Positives = 33/61 (54%), Gaps = 4/61 (6%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRHQIFKACLRK----SPLAKDIDLSALAKYTQGFSGADITEICQR 491 RL+ + I LP+ R QI ++ + +A D+D + +A T+ FSGA++ + + Sbjct: 393 RLEVQMEISLPNEQGRVQILNIHTKRMRDFNKIASDVDNNEIAAKTKNFSGAELEGLVRA 452 Query: 490 A 488 A Sbjct: 453 A 453
>NSF_MOUSE (P46460) Vesicle-fusing ATPase (EC 3.6.4.6) (Vesicular-fusion| protein NSF) (N-ethylmaleimide sensitive fusion protein) (NEM-sensitive fusion protein) (SKD2 protein) Length = 744 Score = 30.0 bits (66), Expect = 6.3 Identities = 20/61 (32%), Positives = 31/61 (50%), Gaps = 4/61 (6%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRHQIFKACLRKSP----LAKDIDLSALAKYTQGFSGADITEICQR 491 RL+ + I LPD R QI + L+ D+D+ LA T+ FSGA++ + + Sbjct: 388 RLEVKMEIGLPDEKGRLQILHIHTARMRGHQLLSADVDIKELAVETKNFSGAELEGLVRA 447 Query: 490 A 488 A Sbjct: 448 A 448
>NSF_HUMAN (P46459) Vesicle-fusing ATPase (EC 3.6.4.6) (Vesicular-fusion| protein NSF) (N-ethylmaleimide sensitive fusion protein) (NEM-sensitive fusion protein) Length = 744 Score = 30.0 bits (66), Expect = 6.3 Identities = 20/61 (32%), Positives = 31/61 (50%), Gaps = 4/61 (6%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRHQIFKACLRKSP----LAKDIDLSALAKYTQGFSGADITEICQR 491 RL+ + I LPD R QI + L+ D+D+ LA T+ FSGA++ + + Sbjct: 388 RLEVKMEIGLPDEKGRLQILHIHTARMRGHQLLSADVDIKELAVETKNFSGAELEGLVRA 447 Query: 490 A 488 A Sbjct: 448 A 448
>NSF_CRIGR (P18708) Vesicle-fusing ATPase (EC 3.6.4.6) (Vesicular-fusion| protein NSF) (N-ethylmaleimide sensitive fusion protein) (NEM-sensitive fusion protein) Length = 744 Score = 30.0 bits (66), Expect = 6.3 Identities = 20/61 (32%), Positives = 31/61 (50%), Gaps = 4/61 (6%) Frame = -1 Query: 658 RLDQLIYIPLPDVDSRHQIFKACLRKSP----LAKDIDLSALAKYTQGFSGADITEICQR 491 RL+ + I LPD R QI + L+ D+D+ LA T+ FSGA++ + + Sbjct: 388 RLEVKMEIGLPDEKGRLQILHIHTARMRGHQLLSADVDIKELAVETKNFSGAELEGLVRA 447 Query: 490 A 488 A Sbjct: 448 A 448
>ROK1_ASHGO (Q75AE1) ATP-dependent RNA helicase ROK1 (EC 3.6.1.-)| Length = 569 Score = 29.6 bits (65), Expect = 8.3 Identities = 20/49 (40%), Positives = 26/49 (53%), Gaps = 1/49 (2%) Frame = +2 Query: 512 ISTAESLGVLGQSTEINILG-QRRLPEASFEDLVPRVDIRKRDVDKLIK 655 I+TAE L +S + G LP SFEDLV R + KR + LI+ Sbjct: 92 ITTAEEASQLRRSYRGKVTGADAPLPIGSFEDLVTRFKLDKRLLSNLIE 140 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 74,825,147 Number of Sequences: 219361 Number of extensions: 1209827 Number of successful extensions: 3479 Number of sequences better than 10.0: 197 Number of HSP's better than 10.0 without gapping: 3303 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3441 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6257125380 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
