Clone Information

BLAST Search Result

Clone Name	rbah61k09
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	RL3_ORYSA (P35684) 60S ribosomal protein L3	291	8e-79
2	RL3B_ARATH (P22738) 60S ribosomal protein L3	272	7e-73
3	RL3A_ARATH (P17094) 60S ribosomal protein L3	266	3e-71
4	RL3_DROME (O16797) 60S ribosomal protein L3	220	2e-57
5	RL3_TOXCA (P49149) 60S ribosomal protein L3	214	2e-55
6	RL3_MOUSE (P27659) 60S ribosomal protein L3 (J1 protein)	211	2e-54
7	RL3_CAEEL (P50880) 60S ribosomal protein L3	209	5e-54
8	RL3_RAT (P21531) 60S ribosomal protein L3 (L4)	209	5e-54
9	RL3_BOVIN (P39872) 60S ribosomal protein L3	209	5e-54
10	RL3_HUMAN (P39023) 60S ribosomal protein L3 (HIV-1 TAR RNA-bindi...	209	7e-54
11	RL3_ASHGO (Q759R7) 60S ribosomal protein L3	208	1e-53
12	RL3_CAEBR (Q9NBK4) 60S ribosomal protein L3	206	5e-53
13	RL3L_BOVIN (Q3SZ10) 60S ribosomal protein L3-like	205	1e-52
14	RL3_MACFA (Q4R5Q0) 60S ribosomal protein L3	203	3e-52
15	RL3_DICDI (P34113) 60S ribosomal protein L3	201	1e-51
16	RL3L_HUMAN (Q92901) 60S ribosomal protein L3-like	201	1e-51
17	RL3_KLULA (Q6CJR7) 60S ribosomal protein L3	201	2e-51
18	RL3_YEAST (P14126) 60S ribosomal protein L3 (YL1) (RP1) (Mainten...	200	2e-51
19	RL3_CANGA (Q6FTJ2) 60S ribosomal protein L3	199	7e-51
20	RL3_ASPFU (Q8NKF4) 60S ribosomal protein L3 (Allergen Asp f 23)	197	2e-50
21	RL3B_SCHPO (P36584) 60S ribosomal protein L3-B	197	2e-50
22	RL3A_SCHPO (P40372) 60S ribosomal protein L3-A	197	2e-50
23	RL3_DEBHA (Q6BXM5) 60S ribosomal protein L3	195	8e-50
24	RL3_NEUCR (P59671) 60S ribosomal protein L3	191	2e-48
25	RL3_ENCCU (Q8SQI3) 60S ribosomal protein L3	187	2e-47
26	RL3_PIG (Q29293) 60S ribosomal protein L3 (Fragment)	116	5e-26
27	RL3_PYRFU (Q8TZZ8) 50S ribosomal protein L3P	113	4e-25
28	RL3_PYRAB (Q9V1T5) 50S ribosomal protein L3P	110	3e-24
29	RL3_PYRHO (O59418) 50S ribosomal protein L3P	110	3e-24
30	RL3_PYRKO (Q5JDJ0) 50S ribosomal protein L3P	105	1e-22
31	RL3_METAC (Q8TRU7) 50S ribosomal protein L3P	94	3e-19
32	RL3_METJA (P54014) 50S ribosomal protein L3P	93	6e-19
33	RL3_METMA (Q8PV50) 50S ribosomal protein L3P	92	1e-18
34	RL3_ARCFU (O28354) 50S ribosomal protein L3P	91	2e-18
35	RL3_METTH (O26110) 50S ribosomal protein L3P	90	5e-18
36	RL3_METVA (Q9UWG2) 50S ribosomal protein L3P	89	1e-17
37	RL3_METKA (Q8TY90) 50S ribosomal protein L3P	88	2e-17
38	RL3_PYRAE (Q8ZW52) 50S ribosomal protein L3P	80	4e-15
39	RL3_THEVO (Q97BX7) 50S ribosomal protein L3P	77	3e-14
40	RL3_HALSA (Q9HPD4) 50S ribosomal protein L3P	77	4e-14
41	RL3_THEAC (Q9HIQ9) 50S ribosomal protein L3P	75	2e-13
42	RL3_HALMA (P20279) 50S ribosomal protein L3P (Hmal3) (Hl1)	74	5e-13
43	RL3_NANEQ (P60458) 50S ribosomal protein L3P	69	1e-11
44	RL3_SULTO (Q975I1) 50S ribosomal protein L3P	62	1e-09
45	RL3_SULSO (Q9UXA8) 50S ribosomal protein L3P	62	2e-09
46	RL3_AERPE (Q9YFM2) 50S ribosomal protein L3P	58	2e-08
47	RL3_SULAC (Q4JB40) 50S ribosomal protein L3P	58	2e-08
48	RUVB_LISMO (Q8Y6Z8) Holliday junction ATP-dependent DNA helicase...	38	0.021
49	RUVB_LISMF (Q71ZD8) Holliday junction ATP-dependent DNA helicase...	38	0.021
50	RUVB_LISIN (Q92BI2) Holliday junction ATP-dependent DNA helicase...	38	0.028
51	CY42_TRYBB (Q99396) Receptor-type adenylate cyclase GRESAG 4.2 (...	31	2.6
52	RL3_MYCPU (Q98PY0) 50S ribosomal protein L3	31	3.4
53	IPAC_SHIFL (P18012) Invasin ipaC (42 kDa antigen)	30	4.5
54	IPAC_SHIDY (Q03946) Invasin ipaC (42 kDa antigen)	30	4.5
55	CYSA_PSEPK (Q88CL2) Sulfate/thiosulfate import ATP-binding prote...	30	4.5
56	ICAM5_HUMAN (Q9UMF0) Intercellular adhesion molecule 5 precursor...	30	4.5
57	RUVB_RHOBA (Q7UPG4) Holliday junction ATP-dependent DNA helicase...	30	5.8
58	POLR_OYMV (P20127) RNA replicase polyprotein (EC 2.7.7.48)	30	5.8
59	LAMA1_MOUSE (P19137) Laminin alpha-1 chain precursor (Laminin A ...	29	10.0
60	RUVB_ENTFA (Q839T5) Holliday junction ATP-dependent DNA helicase...	29	10.0

>RL3_ORYSA (P35684) 60S ribosomal protein L3|
          Length = 388

 Score =  291 bits (746), Expect = 8e-79
 Identities = 139/146 (95%), Positives = 142/146 (97%)
 Frame = -1

Query: 626 RKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEF 447
           RKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGK GQE+H A TEF
Sbjct: 242 RKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKSGQESHAACTEF 301

Query: 446 DRTEKDITPMGGFPHYGVVKADYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKF 267
           DRTEKDITPMGGFPHYGVVK DYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKF
Sbjct: 302 DRTEKDITPMGGFPHYGVVKGDYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKF 361

Query: 266 VDTSSKFGHGRFQTTDEKQRFYGKLK 189
           +DTSSKFGHGRFQTTDEKQRF+GKLK
Sbjct: 362 IDTSSKFGHGRFQTTDEKQRFFGKLK 387

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>RL3B_ARATH (P22738) 60S ribosomal protein L3|
          Length = 389

 Score =  272 bits (695), Expect = 7e-73
 Identities = 125/144 (86%), Positives = 136/144 (94%)
 Frame = -1

Query: 626 RKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEF 447
           RKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVY++GKVGQETH A TE+
Sbjct: 242 RKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYRVGKVGQETHSAMTEY 301

Query: 446 DRTEKDITPMGGFPHYGVVKADYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKF 267
           DRTEKDITPMGGFPHYG+VK DYLMIKGCCVGPKKRVVTLRQ+LLKQTSRLA+EEIKLKF
Sbjct: 302 DRTEKDITPMGGFPHYGIVKEDYLMIKGCCVGPKKRVVTLRQTLLKQTSRLAMEEIKLKF 361

Query: 266 VDTSSKFGHGRFQTTDEKQRFYGK 195
           +D +S  GHGRFQT+ EK +FYG+
Sbjct: 362 IDAASNGGHGRFQTSQEKAKFYGR 385

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>RL3A_ARATH (P17094) 60S ribosomal protein L3|
          Length = 388

 Score =  266 bits (681), Expect = 3e-71
 Identities = 123/145 (84%), Positives = 135/145 (93%)
 Frame = -1

Query: 626 RKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEF 447
           RKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTE+NKK+Y++GKVG E H A TE+
Sbjct: 242 RKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTELNKKIYRLGKVGTEAHTAMTEY 301

Query: 446 DRTEKDITPMGGFPHYGVVKADYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKF 267
           DRTEKD+TPMGGFPHYG+VK DYLMIKGCCVGPKKRVVTLRQSLL QTSRLALEEIKLKF
Sbjct: 302 DRTEKDVTPMGGFPHYGIVKDDYLMIKGCCVGPKKRVVTLRQSLLTQTSRLALEEIKLKF 361

Query: 266 VDTSSKFGHGRFQTTDEKQRFYGKL 192
           +DT+S FGHGRFQT+ EK RFY ++
Sbjct: 362 IDTASIFGHGRFQTSLEKMRFYNRV 386

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>RL3_DROME (O16797) 60S ribosomal protein L3|
          Length = 415

 Score =  220 bits (561), Expect = 2e-57
 Identities = 107/153 (69%), Positives = 123/153 (80%), Gaps = 7/153 (4%)
 Frame = -1

Query: 626 RKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHD----- 462
           RKTH+GLRKVACIGAWHP+RVS TVARAGQ GYHHRTE+NKK+Y+IG  G  T D     
Sbjct: 241 RKTHKGLRKVACIGAWHPSRVSTTVARAGQKGYHHRTEINKKIYRIG-AGIHTKDGKVIK 299

Query: 461 --ASTEFDRTEKDITPMGGFPHYGVVKADYLMIKGCCVGPKKRVVTLRQSLLKQTSRLAL 288
             ASTE+D T+K ITPMGGFPHYG V  D++MIKGCC+G KKR++TLR+SLLK T R AL
Sbjct: 300 NNASTEYDLTDKSITPMGGFPHYGEVNNDFVMIKGCCIGSKKRIITLRKSLLKHTKRSAL 359

Query: 287 EEIKLKFVDTSSKFGHGRFQTTDEKQRFYGKLK 189
           E+IKLKF+DTSSK GHGRFQT  +K  F G LK
Sbjct: 360 EQIKLKFIDTSSKMGHGRFQTPADKLAFMGPLK 392

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>RL3_TOXCA (P49149) 60S ribosomal protein L3|
          Length = 401

 Score =  214 bits (544), Expect = 2e-55
 Identities = 98/149 (65%), Positives = 121/149 (81%), Gaps = 3/149 (2%)
 Frame = -1

Query: 626 RKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGK---VGQETHDAS 456
           RKTH+GLRKVACIGAWHP+RV +TVARAGQ GYHHRTE+NKK+Y++GK     +   +  
Sbjct: 241 RKTHKGLRKVACIGAWHPSRVQFTVARAGQKGYHHRTEVNKKIYRLGKSCLTEEGKKNGG 300

Query: 455 TEFDRTEKDITPMGGFPHYGVVKADYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIK 276
           T++D TEK + PMGGFPHYG+V  D++MI+GCCVG KKR +TLR+SL+ QT R A E+I 
Sbjct: 301 TDYDITEKSVNPMGGFPHYGLVNQDFVMIRGCCVGSKKRPITLRKSLIVQTKRFAHEKIN 360

Query: 275 LKFVDTSSKFGHGRFQTTDEKQRFYGKLK 189
           LK++DTSSKFGHGRFQT  EK+ F GKLK
Sbjct: 361 LKWIDTSSKFGHGRFQTHAEKRAFMGKLK 389

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>RL3_MOUSE (P27659) 60S ribosomal protein L3 (J1 protein)|
          Length = 402

 Score =  211 bits (536), Expect = 2e-54
 Identities = 103/152 (67%), Positives = 125/152 (82%), Gaps = 6/152 (3%)
 Frame = -1

Query: 626 RKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIG-----KVGQET-H 465
           RKTHRGLRKVACIGAWHPARV++TVARAGQ GYHHRTE+NKK+YKIG     K G+   +
Sbjct: 241 RKTHRGLRKVACIGAWHPARVAFTVARAGQKGYHHRTEINKKIYKIGQGYLIKDGKLIKN 300

Query: 464 DASTEFDRTEKDITPMGGFPHYGVVKADYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALE 285
           +AST++D ++K I P+GGF HYG V  D++M+KGC VG KKRV+TLR+SLL QT R ALE
Sbjct: 301 NASTDYDLSDKSINPLGGFVHYGEVTNDFIMLKGCVVGTKKRVLTLRKSLLVQTKRRALE 360

Query: 284 EIKLKFVDTSSKFGHGRFQTTDEKQRFYGKLK 189
           +I LKF+DT+SKFGHGRFQT +EK+ F G LK
Sbjct: 361 KIDLKFIDTTSKFGHGRFQTMEEKKAFMGPLK 392

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>RL3_CAEEL (P50880) 60S ribosomal protein L3|
          Length = 401

 Score =  209 bits (532), Expect = 5e-54
 Identities = 97/149 (65%), Positives = 123/149 (82%), Gaps = 3/149 (2%)
 Frame = -1

Query: 626 RKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKVG---QETHDAS 456
           RKTH+GLRKVACIGAWHP+RV++TVARAGQ G+HHRT +N K+Y+IGK     +  ++ S
Sbjct: 242 RKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEGKNNGS 301

Query: 455 TEFDRTEKDITPMGGFPHYGVVKADYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIK 276
           TEFD T+K ITPMGGFP YG+V  DY+M++G  +GPKKR++TLR+SL+ QT R+A E+I 
Sbjct: 302 TEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKRVAHEKIN 361

Query: 275 LKFVDTSSKFGHGRFQTTDEKQRFYGKLK 189
           LK++DTSSK GHGRFQTT EK+ F GKLK
Sbjct: 362 LKWIDTSSKTGHGRFQTTAEKRAFMGKLK 390

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>RL3_RAT (P21531) 60S ribosomal protein L3 (L4)|
          Length = 402

 Score =  209 bits (532), Expect = 5e-54
 Identities = 102/152 (67%), Positives = 125/152 (82%), Gaps = 6/152 (3%)
 Frame = -1

Query: 626 RKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIG-----KVGQET-H 465
           RKTHRGLRKVACIGAWHPARV+++VARAGQ GYHHRTE+NKK+YKIG     K G+   +
Sbjct: 241 RKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYLIKDGKLIKN 300

Query: 464 DASTEFDRTEKDITPMGGFPHYGVVKADYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALE 285
           +AST++D ++K I P+GGF HYG V  D++M+KGC VG KKRV+TLR+SLL QT R ALE
Sbjct: 301 NASTDYDLSDKSINPLGGFVHYGEVTNDFIMLKGCVVGTKKRVLTLRKSLLVQTKRRALE 360

Query: 284 EIKLKFVDTSSKFGHGRFQTTDEKQRFYGKLK 189
           +I LKF+DT+SKFGHGRFQT +EK+ F G LK
Sbjct: 361 KIDLKFIDTTSKFGHGRFQTMEEKKAFMGPLK 392

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>RL3_BOVIN (P39872) 60S ribosomal protein L3|
          Length = 402

 Score =  209 bits (532), Expect = 5e-54
 Identities = 102/152 (67%), Positives = 125/152 (82%), Gaps = 6/152 (3%)
 Frame = -1

Query: 626 RKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIG-----KVGQET-H 465
           RKTHRGLRKVACIGAWHPARV+++VARAGQ GYHHRTE+NKK+YKIG     K G+   +
Sbjct: 241 RKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYLIKDGKLIKN 300

Query: 464 DASTEFDRTEKDITPMGGFPHYGVVKADYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALE 285
           +AST++D ++K I P+GGF HYG V  D++M+KGC VG KKRV+TLR+SLL QT R ALE
Sbjct: 301 NASTDYDLSDKSINPLGGFVHYGEVTNDFVMLKGCVVGTKKRVLTLRKSLLVQTKRRALE 360

Query: 284 EIKLKFVDTSSKFGHGRFQTTDEKQRFYGKLK 189
           +I LKF+DT+SKFGHGRFQT +EK+ F G LK
Sbjct: 361 KIDLKFIDTTSKFGHGRFQTVEEKKAFMGPLK 392

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>RL3_HUMAN (P39023) 60S ribosomal protein L3 (HIV-1 TAR RNA-binding protein B)|
           (TARBP-B)
          Length = 402

 Score =  209 bits (531), Expect = 7e-54
 Identities = 102/152 (67%), Positives = 125/152 (82%), Gaps = 6/152 (3%)
 Frame = -1

Query: 626 RKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIG-----KVGQET-H 465
           RKTHRGLRKVACIGAWHPARV+++VARAGQ GYHHRTE+NKK+YKIG     K G+   +
Sbjct: 241 RKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYLIKDGKLIKN 300

Query: 464 DASTEFDRTEKDITPMGGFPHYGVVKADYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALE 285
           +AST++D ++K I P+GGF HYG V  D++M+KGC VG KKRV+TLR+SLL QT R ALE
Sbjct: 301 NASTDYDLSDKSINPLGGFVHYGEVTNDFVMLKGCVVGTKKRVLTLRKSLLVQTKRRALE 360

Query: 284 EIKLKFVDTSSKFGHGRFQTTDEKQRFYGKLK 189
           +I LKF+DT+SKFGHGRFQT +EK+ F G LK
Sbjct: 361 KIDLKFIDTTSKFGHGRFQTMEEKKAFMGPLK 392

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>RL3_ASHGO (Q759R7) 60S ribosomal protein L3|
          Length = 388

 Score =  208 bits (529), Expect = 1e-53
 Identities = 102/146 (69%), Positives = 117/146 (80%)
 Frame = -1

Query: 626 RKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEF 447
           RKTHRGLRKVACIGAWHPA V +TVARAGQNGYHHRT +N KVY+IGK G E + A+TEF
Sbjct: 241 RKTHRGLRKVACIGAWHPAHVMWTVARAGQNGYHHRTSINHKVYRIGKGGDEGN-AATEF 299

Query: 446 DRTEKDITPMGGFPHYGVVKADYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKF 267
           DRT+K ITPMGGF HYG V  D++M+KG   G +KRVVTLR+SL   TSR ALEE+ LK+
Sbjct: 300 DRTKKTITPMGGFVHYGAVNNDFVMVKGSIPGTRKRVVTLRKSLYTSTSRRALEEVNLKW 359

Query: 266 VDTSSKFGHGRFQTTDEKQRFYGKLK 189
           +DT+SKFG GRFQT  EK  F G LK
Sbjct: 360 IDTASKFGKGRFQTPAEKHAFMGTLK 385

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>RL3_CAEBR (Q9NBK4) 60S ribosomal protein L3|
          Length = 401

 Score =  206 bits (524), Expect = 5e-53
 Identities = 96/149 (64%), Positives = 122/149 (81%), Gaps = 3/149 (2%)
 Frame = -1

Query: 626 RKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKVG---QETHDAS 456
           RKTH+GLRKVACIGAWHP+RV++TVARAGQ G+HHRT +N K+Y+IGK     +  ++ S
Sbjct: 242 RKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEGKNNGS 301

Query: 455 TEFDRTEKDITPMGGFPHYGVVKADYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIK 276
           TEFD T+K I PMGGFP YG+V  DY+M++G  +GPKKR++TLR+SL+ QT R+A E+I 
Sbjct: 302 TEFDLTQKTINPMGGFPRYGLVNQDYVMLRGAILGPKKRLITLRKSLITQTKRVAHEKIN 361

Query: 275 LKFVDTSSKFGHGRFQTTDEKQRFYGKLK 189
           LK++DTSSK GHGRFQTT EK+ F GKLK
Sbjct: 362 LKWIDTSSKTGHGRFQTTAEKRAFMGKLK 390

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>RL3L_BOVIN (Q3SZ10) 60S ribosomal protein L3-like|
          Length = 406

 Score =  205 bits (521), Expect = 1e-52
 Identities = 99/153 (64%), Positives = 118/153 (77%), Gaps = 7/153 (4%)
 Frame = -1

Query: 626 RKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHD----- 462
           RKTH+GLRKVACIGAWHPARV  ++ARAGQ GYHHRTE+NKK+Y+IG+ G    D     
Sbjct: 241 RKTHKGLRKVACIGAWHPARVGCSIARAGQKGYHHRTELNKKIYRIGR-GLHMEDGKVVK 299

Query: 461 --ASTEFDRTEKDITPMGGFPHYGVVKADYLMIKGCCVGPKKRVVTLRQSLLKQTSRLAL 288
             AST +D T+K ITP+GGFPHYG V  D++M+KGC  G KKRV+TLR+SLL   SR AL
Sbjct: 300 NNASTSYDVTDKSITPLGGFPHYGEVNNDFVMLKGCIAGTKKRVITLRKSLLVHHSRQAL 359

Query: 287 EEIKLKFVDTSSKFGHGRFQTTDEKQRFYGKLK 189
           E I+LKF+DT+SKFGHGRFQT  EK+ F G  K
Sbjct: 360 ENIELKFIDTTSKFGHGRFQTAQEKRAFMGPQK 392

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>RL3_MACFA (Q4R5Q0) 60S ribosomal protein L3|
          Length = 402

 Score =  203 bits (517), Expect = 3e-52
 Identities = 101/152 (66%), Positives = 124/152 (81%), Gaps = 6/152 (3%)
 Frame = -1

Query: 626 RKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIG-----KVGQET-H 465
           RKTHRGLRKVACIGA HPARV+++VARAGQ GYHHRTE+NKK+YKIG     K G+   +
Sbjct: 241 RKTHRGLRKVACIGARHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYLIKDGKLIKN 300

Query: 464 DASTEFDRTEKDITPMGGFPHYGVVKADYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALE 285
           +AST++D ++K I P+GGF HYG V  D++M+KGC VG KKRV+TLR+SLL QT R ALE
Sbjct: 301 NASTDYDLSDKSINPLGGFVHYGEVTNDFVMLKGCVVGTKKRVLTLRKSLLVQTKRRALE 360

Query: 284 EIKLKFVDTSSKFGHGRFQTTDEKQRFYGKLK 189
           +I LKF+DT+SKFGHGRFQT +EK+ F G LK
Sbjct: 361 KIDLKFIDTTSKFGHGRFQTMEEKKAFMGPLK 392

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>RL3_DICDI (P34113) 60S ribosomal protein L3|
          Length = 397

 Score =  201 bits (512), Expect = 1e-51
 Identities = 94/150 (62%), Positives = 116/150 (77%), Gaps = 4/150 (2%)
 Frame = -1

Query: 626 RKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKV----GQETHDA 459
           RKTH+GLRKVACIGAWHP+RVS TV RAGQ GYHHR E NKK+Y+IG+     G++    
Sbjct: 242 RKTHKGLRKVACIGAWHPSRVSTTVPRAGQLGYHHRVERNKKIYRIGQAQPEDGKQISTG 301

Query: 458 STEFDRTEKDITPMGGFPHYGVVKADYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEI 279
            TEFD TEK I PMGGF HYG+VK ++LM+KGC  GP+KR +TLR+S+  QT R ALE+I
Sbjct: 302 KTEFDLTEKTINPMGGFAHYGMVKHEFLMLKGCVAGPRKRALTLRKSITTQTGRAALEKI 361

Query: 278 KLKFVDTSSKFGHGRFQTTDEKQRFYGKLK 189
            LKF+DTSSKFGHG  QT ++K +++G  K
Sbjct: 362 TLKFIDTSSKFGHGLHQTAEDKTKYFGVKK 391

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>RL3L_HUMAN (Q92901) 60S ribosomal protein L3-like|
          Length = 406

 Score =  201 bits (512), Expect = 1e-51
 Identities = 97/153 (63%), Positives = 117/153 (76%), Gaps = 7/153 (4%)
 Frame = -1

Query: 626 RKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHD----- 462
           RKTH+GLRKVACIGAWHPARV  ++ARAGQ GYHHRTE+NKK+++IG+ G    D     
Sbjct: 241 RKTHKGLRKVACIGAWHPARVGCSIARAGQKGYHHRTELNKKIFRIGR-GPHMEDGKLVK 299

Query: 461 --ASTEFDRTEKDITPMGGFPHYGVVKADYLMIKGCCVGPKKRVVTLRQSLLKQTSRLAL 288
             AST +D T K ITP+GGFPHYG V  D++M+KGC  G KKRV+TLR+SLL   SR A+
Sbjct: 300 NNASTSYDVTAKSITPLGGFPHYGEVNNDFVMLKGCIAGTKKRVITLRKSLLVHHSRQAV 359

Query: 287 EEIKLKFVDTSSKFGHGRFQTTDEKQRFYGKLK 189
           E I+LKF+DT+SKFGHGRFQT  EK+ F G  K
Sbjct: 360 ENIELKFIDTTSKFGHGRFQTAQEKRAFMGPQK 392

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>RL3_KLULA (Q6CJR7) 60S ribosomal protein L3|
          Length = 387

 Score =  201 bits (510), Expect = 2e-51
 Identities = 96/146 (65%), Positives = 116/146 (79%)
 Frame = -1

Query: 626 RKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEF 447
           RKTHRGLRKVACIGAWHPA V ++VARAGQ GYHHRT +N KVY++GK G +  +A+TEF
Sbjct: 240 RKTHRGLRKVACIGAWHPAHVMWSVARAGQRGYHHRTSINHKVYRVGK-GDDEANAATEF 298

Query: 446 DRTEKDITPMGGFPHYGVVKADYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKF 267
           DRT+K ITPMGGF HYG +  D++++KG   G +KRVVTLR+SL   TSR ALEE+ LK+
Sbjct: 299 DRTKKTITPMGGFVHYGAINNDFVILKGSIPGTRKRVVTLRKSLYTNTSRKALEEVTLKW 358

Query: 266 VDTSSKFGHGRFQTTDEKQRFYGKLK 189
           +DT+SKFG GRFQT  EK  F G LK
Sbjct: 359 IDTASKFGKGRFQTPAEKHAFLGTLK 384

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>RL3_YEAST (P14126) 60S ribosomal protein L3 (YL1) (RP1) (Maintenance of|
           killer protein 8) (Trichodermin resistance protein)
          Length = 386

 Score =  200 bits (509), Expect = 2e-51
 Identities = 94/146 (64%), Positives = 115/146 (78%)
 Frame = -1

Query: 626 RKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEF 447
           RKTHRGLRKVACIGAWHPA V ++VARAGQ GYH RT +N K+Y++GK G +  + +T F
Sbjct: 239 RKTHRGLRKVACIGAWHPAHVMWSVARAGQRGYHSRTSINHKIYRVGK-GDDEANGATSF 297

Query: 446 DRTEKDITPMGGFPHYGVVKADYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKF 267
           DRT+K ITPMGGF HYG +K D++M+KGC  G +KR+VTLR+SL   TSR ALEE+ LK+
Sbjct: 298 DRTKKTITPMGGFVHYGEIKNDFIMVKGCIPGNRKRIVTLRKSLYTNTSRKALEEVSLKW 357

Query: 266 VDTSSKFGHGRFQTTDEKQRFYGKLK 189
           +DT+SKFG GRFQT  EK  F G LK
Sbjct: 358 IDTASKFGKGRFQTPAEKHAFMGTLK 383

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>RL3_CANGA (Q6FTJ2) 60S ribosomal protein L3|
          Length = 387

 Score =  199 bits (505), Expect = 7e-51
 Identities = 96/146 (65%), Positives = 115/146 (78%)
 Frame = -1

Query: 626 RKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEF 447
           RKTHRGLRKVACIGAWHPA V ++VARAGQ GYHHRT +N K+Y+IGK G +  +A+T F
Sbjct: 240 RKTHRGLRKVACIGAWHPAHVMWSVARAGQRGYHHRTSINHKIYRIGK-GDDEGNAATNF 298

Query: 446 DRTEKDITPMGGFPHYGVVKADYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKF 267
           DRT+K I PMGGF HYG+V  D++M+KG   G KKRVVTLR+SL   TSR A+EE+ LK+
Sbjct: 299 DRTKKTINPMGGFVHYGMVNNDFVMVKGSIPGCKKRVVTLRKSLYTNTSRKAVEEVTLKW 358

Query: 266 VDTSSKFGHGRFQTTDEKQRFYGKLK 189
           +DT+SKFG GRFQT  EK  F G LK
Sbjct: 359 IDTASKFGKGRFQTPAEKHAFMGTLK 384

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>RL3_ASPFU (Q8NKF4) 60S ribosomal protein L3 (Allergen Asp f 23)|
          Length = 392

 Score =  197 bits (502), Expect = 2e-50
 Identities = 95/146 (65%), Positives = 117/146 (80%)
 Frame = -1

Query: 626 RKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEF 447
           RKTH+GLRKVACIGAWHP+ V +TVARAGQ GYHHRT  N KV++IGK G +  +AST+F
Sbjct: 241 RKTHKGLRKVACIGAWHPSHVQWTVARAGQMGYHHRTSCNHKVFRIGK-GSDEGNASTDF 299

Query: 446 DRTEKDITPMGGFPHYGVVKADYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKF 267
           D ++K ITPMGGF  YG VK DY+M+KG   G KKRV+TLR++L  QTSR A E+++LK+
Sbjct: 300 DISKKQITPMGGFVRYGEVKNDYIMVKGSVPGVKKRVMTLRKTLYPQTSRRATEKVELKW 359

Query: 266 VDTSSKFGHGRFQTTDEKQRFYGKLK 189
           +DTSSKFGHG FQT +EK+ F G LK
Sbjct: 360 IDTSSKFGHGAFQTPEEKRAFMGTLK 385

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>RL3B_SCHPO (P36584) 60S ribosomal protein L3-B|
          Length = 387

 Score =  197 bits (501), Expect = 2e-50
 Identities = 95/146 (65%), Positives = 115/146 (78%)
 Frame = -1

Query: 626 RKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEF 447
           RKTHRGLRKVACIGAWHPA V +TVARAG  GY HRT++N K+Y+IG  G +  +AST+F
Sbjct: 239 RKTHRGLRKVACIGAWHPANVQWTVARAGNAGYMHRTQLNSKIYRIG-AGDDAKNASTDF 297

Query: 446 DRTEKDITPMGGFPHYGVVKADYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKF 267
           D TEK ITPMGGF  YGVV+ D++M+ G   GP KRV+TLR+SLL  TSR ALE + LK+
Sbjct: 298 DATEKRITPMGGFVRYGVVENDFVMLNGATPGPVKRVLTLRKSLLTHTSRKALEPVSLKW 357

Query: 266 VDTSSKFGHGRFQTTDEKQRFYGKLK 189
           +DT+SKFGHGRFQT  E ++F G LK
Sbjct: 358 IDTASKFGHGRFQTPAEAKQFLGTLK 383

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>RL3A_SCHPO (P40372) 60S ribosomal protein L3-A|
          Length = 387

 Score =  197 bits (501), Expect = 2e-50
 Identities = 95/146 (65%), Positives = 115/146 (78%)
 Frame = -1

Query: 626 RKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEF 447
           RKTHRGLRKVACIGAWHPA V +TVARAG  GY HRT++N K+Y+IG  G +  +AST+F
Sbjct: 239 RKTHRGLRKVACIGAWHPANVQWTVARAGNAGYMHRTQLNSKIYRIG-AGDDAKNASTDF 297

Query: 446 DRTEKDITPMGGFPHYGVVKADYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKF 267
           D TEK ITPMGGF  YGVV+ D++M+ G   GP KRV+TLR+SLL  TSR ALE + LK+
Sbjct: 298 DATEKRITPMGGFVRYGVVENDFVMLNGATPGPVKRVLTLRKSLLTHTSRKALEPVSLKW 357

Query: 266 VDTSSKFGHGRFQTTDEKQRFYGKLK 189
           +DT+SKFGHGRFQT  E ++F G LK
Sbjct: 358 IDTASKFGHGRFQTPAEAKQFLGTLK 383

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>RL3_DEBHA (Q6BXM5) 60S ribosomal protein L3|
          Length = 389

 Score =  195 bits (496), Expect = 8e-50
 Identities = 94/146 (64%), Positives = 112/146 (76%)
 Frame = -1

Query: 626 RKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEF 447
           RKTHRGLRKVACIGAWHPA V +TVARAGQNG+HHRT +N KVY++G  G E+  A TEF
Sbjct: 240 RKTHRGLRKVACIGAWHPANVQWTVARAGQNGFHHRTSINHKVYRVGSAGDESSGA-TEF 298

Query: 446 DRTEKDITPMGGFPHYGVVKADYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKF 267
           DRT+K I PMGGF  YG VK D++++KG   G KKR+VT+R+SL   TSR A E + LK+
Sbjct: 299 DRTKKTINPMGGFVRYGNVKNDFMLLKGSIPGVKKRIVTIRKSLYVDTSRRATENVNLKW 358

Query: 266 VDTSSKFGHGRFQTTDEKQRFYGKLK 189
           +DT+SKFG GRFQT  EK  F G LK
Sbjct: 359 IDTASKFGKGRFQTPAEKHAFLGTLK 384

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>RL3_NEUCR (P59671) 60S ribosomal protein L3|
          Length = 392

 Score =  191 bits (484), Expect = 2e-48
 Identities = 91/146 (62%), Positives = 114/146 (78%)
 Frame = -1

Query: 626 RKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEF 447
           RKTH+GLRKVACIGAWHP+ V +TVARAGQ GYHHRT +N K+Y+IGK G     A+TE 
Sbjct: 241 RKTHKGLRKVACIGAWHPSHVQWTVARAGQAGYHHRTSVNHKIYRIGK-GDAEDSAATEV 299

Query: 446 DRTEKDITPMGGFPHYGVVKADYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKF 267
           D T+K ITPMGGF  YG +  D++M+KG   G KKRV+TLR+S+   TSR ALE+++LK+
Sbjct: 300 DVTKKKITPMGGFVRYGEINNDFVMVKGSVPGVKKRVMTLRKSMFVHTSRKALEKVELKW 359

Query: 266 VDTSSKFGHGRFQTTDEKQRFYGKLK 189
           +DTSS+FGHG FQT  EK++F G LK
Sbjct: 360 IDTSSEFGHGAFQTPAEKKQFQGTLK 385

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>RL3_ENCCU (Q8SQI3) 60S ribosomal protein L3|
          Length = 383

 Score =  187 bits (476), Expect = 2e-47
 Identities = 92/146 (63%), Positives = 114/146 (78%)
 Frame = -1

Query: 626 RKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEF 447
           RK+ +G+RKVACIGAWHP+RV Y++ARAGQ G+H RTE NK+VY IG     + +  TEF
Sbjct: 236 RKSRKGIRKVACIGAWHPSRVMYSIARAGQMGFHRRTEKNKRVYMIGN---GSSNIKTEF 292

Query: 446 DRTEKDITPMGGFPHYGVVKADYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKF 267
           D TEK I+PMGGFPHYG V+ D++M+KG  VG +KRVVTLR+SLL+Q    A EE+ +KF
Sbjct: 293 DLTEKPISPMGGFPHYGEVRNDFIMVKGAVVGARKRVVTLRKSLLRQR---AGEELVIKF 349

Query: 266 VDTSSKFGHGRFQTTDEKQRFYGKLK 189
           VDTSSK GHGRFQT+ EK+ FYG  K
Sbjct: 350 VDTSSKIGHGRFQTSAEKKAFYGARK 375

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>RL3_PIG (Q29293) 60S ribosomal protein L3 (Fragment)|
          Length = 130

 Score =  116 bits (291), Expect = 5e-26
 Identities = 55/92 (59%), Positives = 71/92 (77%), Gaps = 6/92 (6%)
 Frame = -1

Query: 626 RKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIG-----KVGQ-ETH 465
           RKTHRGLRKVACIGAWHPAR +++VARAGQ GYHHRTE+NKK+YKIG     K G+   +
Sbjct: 39  RKTHRGLRKVACIGAWHPARXAFSVARAGQKGYHHRTEINKKIYKIGQGYLIKDGKLIKN 98

Query: 464 DASTEFDRTEKDITPMGGFPHYGVVKADYLMI 369
           +  T++D ++K I P+G F HYG V  D++M+
Sbjct: 99  NXXTDYDLSDKSINPLGRFVHYGEVTNDFVML 130

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>RL3_PYRFU (Q8TZZ8) 50S ribosomal protein L3P|
          Length = 365

 Score =  113 bits (283), Expect = 4e-25
 Identities = 54/125 (43%), Positives = 80/125 (64%)
 Frame = -1

Query: 623 KTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFD 444
           K  +G RKV  IG WHPARV +TV  AGQ G+HHRTE+NK++  IG+ G+   D +TE  
Sbjct: 245 KDSKGRRKVGSIGPWHPARVMWTVPMAGQMGFHHRTELNKRLIAIGENGKLKLDENTEI- 303

Query: 443 RTEKDITPMGGFPHYGVVKADYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFV 264
               +ITP GGFPHYG+V++D++MI G   G  KR++ +R ++     +  ++  ++ +V
Sbjct: 304 ----EITPKGGFPHYGIVRSDFMMIAGSVPGAIKRIIRVRPAIRPPKKKPPVQRPQITYV 359

Query: 263 DTSSK 249
              SK
Sbjct: 360 SVESK 364

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>RL3_PYRAB (Q9V1T5) 50S ribosomal protein L3P|
          Length = 361

 Score =  110 bits (276), Expect = 3e-24
 Identities = 53/125 (42%), Positives = 78/125 (62%)
 Frame = -1

Query: 623 KTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFD 444
           K  +G RKV  IG WHPARV +TV  AGQ G+HHRTE+NK++  IG+ G+         D
Sbjct: 242 KDSKGRRKVGSIGPWHPARVMWTVPMAGQMGFHHRTELNKRLIAIGENGK------LVID 295

Query: 443 RTEKDITPMGGFPHYGVVKADYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFV 264
             E +ITP GGFPHYG+V++D++MI G   G  KR++ +R ++     +  ++  ++ +V
Sbjct: 296 GNEIEITPKGGFPHYGIVRSDFMMIAGSVPGAIKRIIRVRPAIRPPKKKPPVQRPQITYV 355

Query: 263 DTSSK 249
              SK
Sbjct: 356 SVESK 360

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>RL3_PYRHO (O59418) 50S ribosomal protein L3P|
          Length = 362

 Score =  110 bits (275), Expect = 3e-24
 Identities = 53/125 (42%), Positives = 77/125 (61%)
 Frame = -1

Query: 623 KTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFD 444
           K  +G RKV  IG WHPARV +TV  AGQ G+HHRTE+NK++  IG+ G+         D
Sbjct: 243 KDSKGRRKVGSIGPWHPARVMWTVPMAGQMGFHHRTELNKRLIAIGENGK------LVID 296

Query: 443 RTEKDITPMGGFPHYGVVKADYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFV 264
             E +ITP GGFPHYG+V+ D++MI G   G  KR++ +R ++     +  ++  ++ +V
Sbjct: 297 GNEIEITPKGGFPHYGIVRGDFMMIAGSVPGAIKRIIRVRPAIRPPKKKPPVQRPQITYV 356

Query: 263 DTSSK 249
              SK
Sbjct: 357 SVESK 361

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>RL3_PYRKO (Q5JDJ0) 50S ribosomal protein L3P|
          Length = 346

 Score =  105 bits (262), Expect = 1e-22
 Identities = 50/119 (42%), Positives = 76/119 (63%)
 Frame = -1

Query: 605 RKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDI 426
           R +  +G WHPARV +TV +AGQ G+HHRTE NK++  IG+ G+   D +      E +I
Sbjct: 233 RHIGNLGPWHPARVMWTVPQAGQMGFHHRTEFNKRLIAIGENGKLVLDGN------EIEI 286

Query: 425 TPMGGFPHYGVVKADYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSK 249
           TP GGFPHYG+V++D+LMI+G   G  KR++ +R ++     +  +E  ++ +V   SK
Sbjct: 287 TPKGGFPHYGIVRSDFLMIEGTIPGSFKRIIRVRPAIRPPKKKPPVERPQITYVSRESK 345

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>RL3_METAC (Q8TRU7) 50S ribosomal protein L3P|
          Length = 337

 Score = 94.4 bits (233), Expect = 3e-19
 Identities = 49/122 (40%), Positives = 73/122 (59%)
 Frame = -1

Query: 608 LRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKD 429
           LR+V  +GA++P+RVS+ V + GQ GYH RTE NK++ KIG  G+E              
Sbjct: 232 LRQVGTLGAFNPSRVSWRVPQMGQMGYHQRTEFNKRILKIGSDGEE-------------- 277

Query: 428 ITPMGGFPHYGVVKADYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSK 249
           +TP GGF +YG+V+ DY++IKG   GP KR++ LR  +  +  +  L E  + ++   SK
Sbjct: 278 VTPEGGFINYGLVRGDYILIKGSVPGPSKRLIRLRDPI--RAKKADLGEPNILYISRESK 335

Query: 248 FG 243
            G
Sbjct: 336 QG 337

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>RL3_METJA (P54014) 50S ribosomal protein L3P|
          Length = 335

 Score = 93.2 bits (230), Expect = 6e-19
 Identities = 49/121 (40%), Positives = 69/121 (57%)
 Frame = -1

Query: 605 RKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDI 426
           R V  IG W P  V ++V   GQ GYH RTE NK++ KIG  G E              I
Sbjct: 230 RHVGSIGPWQPKMVMWSVPMPGQMGYHQRTEYNKRILKIGNNGDE--------------I 275

Query: 425 TPMGGFPHYGVVKADYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSKF 246
           TP GGF HYGV++ +Y+++KG   GP KR++ LR+++  Q   + + EI   ++ T+SK 
Sbjct: 276 TPKGGFLHYGVIRNNYVVLKGSVQGPAKRLIVLRRAIRPQEPLIKVPEI--TYISTTSKQ 333

Query: 245 G 243
           G
Sbjct: 334 G 334

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>RL3_METMA (Q8PV50) 50S ribosomal protein L3P|
          Length = 337

 Score = 92.4 bits (228), Expect = 1e-18
 Identities = 47/122 (38%), Positives = 73/122 (59%)
 Frame = -1

Query: 608 LRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKD 429
           LR++  +G+++P+RVS+ V + GQ GYH RTE NK++ KIG  G+E              
Sbjct: 232 LRQIGTLGSFNPSRVSWRVPQMGQMGYHQRTEFNKRILKIGSDGEE-------------- 277

Query: 428 ITPMGGFPHYGVVKADYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSK 249
           +TP GGF +YG+V+ DY++IKG   GP KR++ LR  +  +  +  L E  + ++   SK
Sbjct: 278 VTPEGGFINYGLVRGDYVLIKGSVPGPSKRLIRLRDPI--RAKKADLGEPNILYISRESK 335

Query: 248 FG 243
            G
Sbjct: 336 QG 337

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>RL3_ARCFU (O28354) 50S ribosomal protein L3P|
          Length = 331

 Score = 91.3 bits (225), Expect = 2e-18
 Identities = 45/121 (37%), Positives = 72/121 (59%)
 Frame = -1

Query: 605 RKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDI 426
           R+V  +G W+P  V +TV +AGQ G+H RTE NK++ KIG+ G+E              I
Sbjct: 226 RRVGNLGPWNPHHVRWTVPQAGQMGFHQRTEYNKRLIKIGENGEE--------------I 271

Query: 425 TPMGGFPHYGVVKADYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSKF 246
           TP GGF HYGV++  Y+++ G   GP KR++ +R ++  +  +   + + + +V T+SK 
Sbjct: 272 TPKGGFLHYGVIRTQYVLVTGSVPGPVKRLIRMRDAI--RPPKAHFDGVNIVYVSTTSKQ 329

Query: 245 G 243
           G
Sbjct: 330 G 330

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>RL3_METTH (O26110) 50S ribosomal protein L3P|
          Length = 337

 Score = 90.1 bits (222), Expect = 5e-18
 Identities = 49/122 (40%), Positives = 72/122 (59%), Gaps = 1/122 (0%)
 Frame = -1

Query: 605 RKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKD- 429
           R +  +G W P+R  +TV +AGQ GYH RTE NK++ KIG             D +E D 
Sbjct: 230 RHIGSLGPWTPSRTMWTVPQAGQMGYHRRTEYNKQILKIG-------------DASEADL 276

Query: 428 ITPMGGFPHYGVVKADYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSK 249
           + P GGF  YG+V+ DY+MIKG   GP KR+V LR+++  + +    E  ++ ++ T+SK
Sbjct: 277 VNPDGGFVRYGLVRNDYVMIKGSVPGPTKRLVVLRKAI--RAAGKQEEAPQINYISTASK 334

Query: 248 FG 243
            G
Sbjct: 335 QG 336

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>RL3_METVA (Q9UWG2) 50S ribosomal protein L3P|
          Length = 334

 Score = 89.0 bits (219), Expect = 1e-17
 Identities = 48/122 (39%), Positives = 66/122 (54%)
 Frame = -1

Query: 605 RKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDI 426
           R+   IG W P RV +TV  AGQ G+H RTE NK++ K+G  G E              I
Sbjct: 229 RQTGSIGPWRPKRVMWTVPLAGQMGFHQRTEYNKRILKLGSEGAE--------------I 274

Query: 425 TPMGGFPHYGVVKADYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSKF 246
           TP GGF +YG VK  Y+++KG   GP KR+V LR ++     +  L E+   ++   SK 
Sbjct: 275 TPKGGFLNYGAVKNGYVVVKGTVQGPAKRLVVLRGAVRPAEDKFGLPEV--TYISKESKQ 332

Query: 245 GH 240
           G+
Sbjct: 333 GN 334

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>RL3_METKA (Q8TY90) 50S ribosomal protein L3P|
          Length = 361

 Score = 88.2 bits (217), Expect = 2e-17
 Identities = 48/106 (45%), Positives = 64/106 (60%), Gaps = 2/106 (1%)
 Frame = -1

Query: 626 RKTHRGL--RKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDAST 453
           RKT R    R +  IG   P+RV +TV  AGQ GYH RTE NK++ KIG+ G+E      
Sbjct: 227 RKTQRKQKGRHIGSIGPITPSRVRWTVPMAGQVGYHQRTEHNKRILKIGEDGEE------ 280

Query: 452 EFDRTEKDITPMGGFPHYGVVKADYLMIKGCCVGPKKRVVTLRQSL 315
                   +TP GGF +YGVV+ DY+MI G   GPKKR++ +R ++
Sbjct: 281 --------VTPRGGFVNYGVVRGDYIMIHGTVPGPKKRLIRVRPAV 318

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>RL3_PYRAE (Q8ZW52) 50S ribosomal protein L3P|
          Length = 338

 Score = 80.5 bits (197), Expect = 4e-15
 Identities = 45/100 (45%), Positives = 57/100 (57%)
 Frame = -1

Query: 623 KTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFD 444
           K  +G R+   IG   PA V +T  R GQ G+H RTE NK++ KIG+ G E         
Sbjct: 229 KHRKGHRRTGTIGPQAPA-VMFTQPRPGQMGFHQRTEYNKRLLKIGENGAE--------- 278

Query: 443 RTEKDITPMGGFPHYGVVKADYLMIKGCCVGPKKRVVTLR 324
                ITP  GFPHYGVVK  Y++I+G   G +KR+V LR
Sbjct: 279 -----ITPKSGFPHYGVVKGPYILIQGSVPGARKRLVVLR 313

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>RL3_THEVO (Q97BX7) 50S ribosomal protein L3P|
          Length = 331

 Score = 77.4 bits (189), Expect = 3e-14
 Identities = 46/128 (35%), Positives = 65/128 (50%)
 Frame = -1

Query: 626 RKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEF 447
           RK  +  R +  +G WHP  V  TV +AGQ GY  RT  N +V K  K      DA T  
Sbjct: 217 RKNRKHRRMIGTLGPWHPDWVRNTVPQAGQMGYQQRTISNVRVLKYSK----GEDADT-- 270

Query: 446 DRTEKDITPMGGFPHYGVVKADYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKF 267
                 I   GGF HYG+VK DY+++ G   GP KR++ +R    ++     ++ +KL +
Sbjct: 271 ------INVRGGFLHYGLVKNDYVLLFGSVPGPAKRLIKMRDPARQKVP--DIDNVKLDY 322

Query: 266 VDTSSKFG 243
           +   SK G
Sbjct: 323 ISLESKQG 330

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>RL3_HALSA (Q9HPD4) 50S ribosomal protein L3P|
          Length = 334

 Score = 77.0 bits (188), Expect = 4e-14
 Identities = 44/121 (36%), Positives = 65/121 (53%)
 Frame = -1

Query: 605 RKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDI 426
           R++  +G W+P+RV  TV + GQ GYH RTE+NK++  I   G E               
Sbjct: 231 RRIGNLGPWNPSRVRSTVPQQGQTGYHQRTELNKRLIDIND-GDEP-------------- 275

Query: 425 TPMGGFPHYGVVKADYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSKF 246
           TP GGFP+YG V   Y ++KG   GP++R+V  R ++    S     E+  ++V T+S  
Sbjct: 276 TPDGGFPNYGEVDGPYTLVKGSVPGPEQRLVRFRPAVRPNESPRLDPEV--RYVSTASNQ 333

Query: 245 G 243
           G
Sbjct: 334 G 334

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>RL3_THEAC (Q9HIQ9) 50S ribosomal protein L3P|
          Length = 331

 Score = 75.1 bits (183), Expect = 2e-13
 Identities = 45/128 (35%), Positives = 64/128 (50%)
 Frame = -1

Query: 626 RKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEF 447
           RK  +  R +  +G WHP  V  TV +AGQ G+  RT  N +V K G           E 
Sbjct: 217 RKNRKHRRMIGTLGPWHPDWVRNTVPQAGQMGFQQRTISNVRVIKYGN--------KEEV 268

Query: 446 DRTEKDITPMGGFPHYGVVKADYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKF 267
           D     I   GGF HYG VK DY+++ G   G  KR++ +R    ++     +EE+KL++
Sbjct: 269 D----SINVRGGFLHYGFVKNDYVLLFGSIPGASKRLIKMRDPARQKVP--DIEEVKLEY 322

Query: 266 VDTSSKFG 243
           +   SK G
Sbjct: 323 ISLESKQG 330

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>RL3_HALMA (P20279) 50S ribosomal protein L3P (Hmal3) (Hl1)|
          Length = 337

 Score = 73.6 bits (179), Expect = 5e-13
 Identities = 37/97 (38%), Positives = 54/97 (55%)
 Frame = -1

Query: 605 RKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDI 426
           R++  +G W+P+RV  TV + GQ GYH RTE+NK++  IG+  + T D            
Sbjct: 234 RRIGNLGPWNPSRVRSTVPQQGQTGYHQRTELNKRLIDIGEGDEPTVD------------ 281

Query: 425 TPMGGFPHYGVVKADYLMIKGCCVGPKKRVVTLRQSL 315
              GGF +YG V   Y ++KG   GP KR+V  R ++
Sbjct: 282 ---GGFVNYGEVDGPYTLVKGSVPGPDKRLVRFRPAV 315

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>RL3_NANEQ (P60458) 50S ribosomal protein L3P|
          Length = 321

 Score = 68.9 bits (167), Expect = 1e-11
 Identities = 39/116 (33%), Positives = 60/116 (51%)
 Frame = -1

Query: 623 KTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFD 444
           K+ +G+RKV  IG+  P R+  TV   GQ GYH RTE NK + KIG              
Sbjct: 215 KSEKGVRKVGAIGSRGPGRIFPTVPMPGQMGYHRRTEYNKLIIKIG-------------- 260

Query: 443 RTEKDITPMGGFPHYGVVKADYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIK 276
              + +   GG+  YG V    +++KG   GP+KR++ LR+++     +  +E I+
Sbjct: 261 ---EPLNVEGGWVRYGQVIGPTILLKGSVPGPRKRLIILREAIRPPRKQEKVEGIE 313

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>RL3_SULTO (Q975I1) 50S ribosomal protein L3P|
          Length = 343

 Score = 62.0 bits (149), Expect = 1e-09
 Identities = 45/127 (35%), Positives = 64/127 (50%)
 Frame = -1

Query: 623 KTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFD 444
           K  +G RKV   G    +  SY V + GQ GYH RTE NK++ KI     E         
Sbjct: 235 KHRKGSRKVGARGPSF-STPSY-VPQPGQMGYHRRTEYNKRILKISDDPNE--------- 283

Query: 443 RTEKDITPMGGFPHYGVVKADYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFV 264
                I P GGF +YG+V+  YL+I+G  +G KKR + LR  +  + S +     K+ +V
Sbjct: 284 -----INPKGGFVNYGIVRNTYLIIEGSIIGAKKRPLFLRYPI--RPSWIPQSAPKITYV 336

Query: 263 DTSSKFG 243
           +  S+ G
Sbjct: 337 NLYSQQG 343

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>RL3_SULSO (Q9UXA8) 50S ribosomal protein L3P|
          Length = 351

 Score = 61.6 bits (148), Expect = 2e-09
 Identities = 37/101 (36%), Positives = 53/101 (52%)
 Frame = -1

Query: 623 KTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFD 444
           K  +G RK+   G       SYT  + GQ G+H RTE NK++ KIG              
Sbjct: 243 KHRKGSRKIGTRGP-SLGTPSYT-PQPGQLGFHRRTEYNKRIIKIGD------------- 287

Query: 443 RTEKDITPMGGFPHYGVVKADYLMIKGCCVGPKKRVVTLRQ 321
              K+I P GGF  YG+V+  Y++++G  +G KKR + LR+
Sbjct: 288 -EPKEINPAGGFVRYGIVRNTYVLLEGSILGSKKRPIFLRE 327

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>RL3_AERPE (Q9YFM2) 50S ribosomal protein L3P|
          Length = 344

 Score = 58.2 bits (139), Expect = 2e-08
 Identities = 35/129 (27%), Positives = 63/129 (48%), Gaps = 2/129 (1%)
 Frame = -1

Query: 623 KTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFD 444
           K  +G R++      H     +   +AGQ G+H RTE NK++  I   G +         
Sbjct: 231 KHRKGSRRIGARS--HGRSTFWETPQAGQTGFHRRTEYNKRILMIDDDGYK--------- 279

Query: 443 RTEKDITPMGGFPHYGVVKADYLMIKGCCVGPKKRVVTLRQSLL--KQTSRLALEEIKLK 270
                +TP GGF  YGVV++ ++M+ G   G  KR + +R ++   +   +L + + ++ 
Sbjct: 280 -----VTPAGGFLRYGVVRSTFVMLSGSIPGTPKRPIVMRWAIRPPEWYLKLGVRKPEIT 334

Query: 269 FVDTSSKFG 243
           ++  +SK G
Sbjct: 335 YISLASKQG 343

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>RL3_SULAC (Q4JB40) 50S ribosomal protein L3P|
          Length = 342

 Score = 58.2 bits (139), Expect = 2e-08
 Identities = 42/127 (33%), Positives = 64/127 (50%)
 Frame = -1

Query: 623 KTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFD 444
           K  +G RK+   G    +  SY V + GQ G+H RTE NK++ KIG              
Sbjct: 234 KHRKGSRKIGARGP-SISTPSY-VPQPGQLGFHRRTEYNKRIIKIGD------------- 278

Query: 443 RTEKDITPMGGFPHYGVVKADYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFV 264
               +I P GG  +YG+VK  YL+I+G  +G +KR + LR  +    S  +    K+ +V
Sbjct: 279 -NVNEINPAGGIVNYGLVKNTYLVIEGSVLGSRKRPLFLRYPIRPSWSPESAP--KITYV 335

Query: 263 DTSSKFG 243
           + +S+ G
Sbjct: 336 NLASQQG 342

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>RUVB_LISMO (Q8Y6Z8) Holliday junction ATP-dependent DNA helicase ruvB (EC|
           3.6.1.-)
          Length = 335

 Score = 38.1 bits (87), Expect = 0.021
 Identities = 32/115 (27%), Positives = 55/115 (47%), Gaps = 5/115 (4%)
 Frame = +3

Query: 132 VSHVRF---DKMTQLILRSSSSLELAIEPLLL--VRGLETAVPKLGRGVDKLELDFLQCE 296
           + H+ F   +++T+++LR+S+ L+  I+ L    +       P++   + K   DF Q  
Sbjct: 177 IDHLEFYTEEQLTEIVLRTSNILDTKIDDLGAREIARRSRGTPRIANRLLKRVRDFAQVR 236

Query: 297 TRGLLQQGLAEGHHTLLWPDTASLDHQVVGLHHTIVREATHGSDVLLGPVELSRG 461
             G + + LA+   TLL  D   LD     L HTI+ ++  G  V L  +  S G
Sbjct: 237 GNGTVTEKLAKEALTLLQVDPRGLDTIDQKLLHTII-QSFRGGPVGLDTIAASIG 290

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>RUVB_LISMF (Q71ZD8) Holliday junction ATP-dependent DNA helicase ruvB (EC|
           3.6.1.-)
          Length = 335

 Score = 38.1 bits (87), Expect = 0.021
 Identities = 32/115 (27%), Positives = 55/115 (47%), Gaps = 5/115 (4%)
 Frame = +3

Query: 132 VSHVRF---DKMTQLILRSSSSLELAIEPLLL--VRGLETAVPKLGRGVDKLELDFLQCE 296
           + H+ F   +++T+++LR+S+ L+  I+ L    +       P++   + K   DF Q  
Sbjct: 177 IDHLEFYTEEQLTEIVLRTSNILDTKIDDLGAREIARRSRGTPRIANRLLKRVRDFAQVR 236

Query: 297 TRGLLQQGLAEGHHTLLWPDTASLDHQVVGLHHTIVREATHGSDVLLGPVELSRG 461
             G + + LA+   TLL  D   LD     L HTI+ ++  G  V L  +  S G
Sbjct: 237 GNGTVTEKLAKEALTLLQVDPRGLDTIDQKLLHTII-QSFRGGPVGLDTIAASIG 290

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>RUVB_LISIN (Q92BI2) Holliday junction ATP-dependent DNA helicase ruvB (EC|
           3.6.1.-)
          Length = 335

 Score = 37.7 bits (86), Expect = 0.028
 Identities = 32/115 (27%), Positives = 54/115 (46%), Gaps = 5/115 (4%)
 Frame = +3

Query: 132 VSHVRF---DKMTQLILRSSSSLELAIEPLLL--VRGLETAVPKLGRGVDKLELDFLQCE 296
           + H+ F   +++T+++LR+S  L+  I+ L    +       P++   + K   DF Q  
Sbjct: 177 IDHLEFYTEEQLTEIVLRTSGILDTKIDDLGAREIARRSRGTPRIANRLLKRVRDFAQVR 236

Query: 297 TRGLLQQGLAEGHHTLLWPDTASLDHQVVGLHHTIVREATHGSDVLLGPVELSRG 461
             G + + LA+   TLL  D   LD     L HTI+ ++  G  V L  +  S G
Sbjct: 237 GNGTVTEKLAKEALTLLQVDPRGLDTIDQKLLHTII-QSFRGGPVGLDTIAASIG 290

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>CY42_TRYBB (Q99396) Receptor-type adenylate cyclase GRESAG 4.2 (EC 4.6.1.1)|
           (ATP pyrophosphate-lyase) (Adenylyl cyclase) (Fragment)
          Length = 572

 Score = 31.2 bits (69), Expect = 2.6
 Identities = 17/63 (26%), Positives = 29/63 (46%), Gaps = 5/63 (7%)
 Frame = -1

Query: 566 VSYTVARAGQNGYHHRTEMNKKVYKIGKVGQ-----ETHDASTEFDRTEKDITPMGGFPH 402
           + Y     G + Y        +   +G  GQ     ET+ + +  +R++ D+TP+GG P 
Sbjct: 401 IRYDEVTKGYDYYGQTANTAARTESVGNGGQVLMTCETYHSLSTAERSQFDVTPLGGVPL 460

Query: 401 YGV 393
            GV
Sbjct: 461 RGV 463

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>RL3_MYCPU (Q98PY0) 50S ribosomal protein L3|
          Length = 266

 Score = 30.8 bits (68), Expect = 3.4
 Identities = 15/43 (34%), Positives = 26/43 (60%)
 Frame = -1

Query: 392 VKADYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFV 264
           VK + L++KG   GPKK  V +++   K  S+ A++ + L+ V
Sbjct: 182 VKNNILLVKGAVPGPKKGFVVIKECAKKIPSKEAVKLVDLEIV 224

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>IPAC_SHIFL (P18012) Invasin ipaC (42 kDa antigen)|
          Length = 363

 Score = 30.4 bits (67), Expect = 4.5
 Identities = 16/50 (32%), Positives = 27/50 (54%)
 Frame = +3

Query: 177 SSSSLELAIEPLLLVRGLETAVPKLGRGVDKLELDFLQCETRGLLQQGLA 326
           SS+++ L I   +L+  L TA  KLG  +  +  D  +     +++QGLA
Sbjct: 103 SSNAVSLIISVAVLLSALRTAETKLGSQLSLIAFDATKSAAENIVRQGLA 152

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>IPAC_SHIDY (Q03946) Invasin ipaC (42 kDa antigen)|
          Length = 363

 Score = 30.4 bits (67), Expect = 4.5
 Identities = 16/50 (32%), Positives = 27/50 (54%)
 Frame = +3

Query: 177 SSSSLELAIEPLLLVRGLETAVPKLGRGVDKLELDFLQCETRGLLQQGLA 326
           SS+++ L I   +L+  L TA  KLG  +  +  D  +     +++QGLA
Sbjct: 103 SSNAVSLIISVAVLLSALRTAETKLGSQLSLIAFDATKSAAENIVRQGLA 152

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>CYSA_PSEPK (Q88CL2) Sulfate/thiosulfate import ATP-binding protein cysA (EC|
           3.6.3.25) (Sulfate-transporting ATPase)
          Length = 329

 Score = 30.4 bits (67), Expect = 4.5
 Identities = 21/76 (27%), Positives = 36/76 (47%), Gaps = 1/76 (1%)
 Frame = +3

Query: 186 SLELAIEPLLLVRGLETAVPKLGRGVDKLELDFLQCETRGLLQQGLAEGHHTLLWPDTAS 365
           ++E+A   +++ +G+   +   G   D+   DF+        +  L+EGHH L  P   S
Sbjct: 200 AMEVADRIVVMNKGVIEQIGSPGEVYDQPANDFVYHFLGDSNRLALSEGHHVLFRPHEVS 259

Query: 366 LD-HQVVGLHHTIVRE 410
           L  H+  G H   VR+
Sbjct: 260 LSRHETEGHHAAEVRD 275

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>ICAM5_HUMAN (Q9UMF0) Intercellular adhesion molecule 5 precursor (ICAM-5)|
           (Telencephalin)
          Length = 924

 Score = 30.4 bits (67), Expect = 4.5
 Identities = 16/66 (24%), Positives = 27/66 (40%)
 Frame = +3

Query: 231 ETAVPKLGRGVDKLELDFLQCETRGLLQQGLAEGHHTLLWPDTASLDHQVVGLHHTIVRE 410
           E+  P     ++  E   L C  RG    G+      + WP+   +  +  G +H +   
Sbjct: 670 ESTCPSHQTWLEGAEASALACAARGRPSPGVRCSREGIPWPEQQRVSREDAGTYHCVATN 729

Query: 411 ATHGSD 428
           A HG+D
Sbjct: 730 A-HGTD 734

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>RUVB_RHOBA (Q7UPG4) Holliday junction ATP-dependent DNA helicase ruvB (EC|
           3.6.1.-)
          Length = 366

 Score = 30.0 bits (66), Expect = 5.8
 Identities = 18/87 (20%), Positives = 41/87 (47%), Gaps = 2/87 (2%)
 Frame = +3

Query: 153 KMTQLILRSSSSLELAIEPLL--LVRGLETAVPKLGRGVDKLELDFLQCETRGLLQQGLA 326
           ++ +++LR+S  L + ++P    ++     + P+L         D+ Q +T+G ++  + 
Sbjct: 216 ELAEIVLRNSKKLNIEVDPTSAGVIADRSRSTPRLANNRLLWVRDYAQSKTKGNVEASVC 275

Query: 327 EGHHTLLWPDTASLDHQVVGLHHTIVR 407
           E    ++  D   LD Q      T++R
Sbjct: 276 EAALDMIGIDHLGLDKQDRNYLDTLMR 302

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>POLR_OYMV (P20127) RNA replicase polyprotein (EC 2.7.7.48)|
          Length = 1776

 Score = 30.0 bits (66), Expect = 5.8
 Identities = 18/85 (21%), Positives = 35/85 (41%)
 Frame = +1

Query: 265  TNLSLISSSARREVCFSRDWRRVTTRFFGPTQHPLIIR*SAFTTP**GKPPMGVMSFSVL 444
            T  +++S+++R +     DWR    R F  +QH                         V 
Sbjct: 1400 TQATIVSNASRSDP----DWRYTVVRIFAKSQH------------------------KVN 1431

Query: 445  SNSVEASWVSCPTLPILYTFLFISV 519
              S+  SW +C TL +++ F+ +++
Sbjct: 1432 DGSIFGSWKACQTLALMHDFVILTL 1456

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>LAMA1_MOUSE (P19137) Laminin alpha-1 chain precursor (Laminin A chain)|
          Length = 3084

 Score = 29.3 bits (64), Expect = 10.0
 Identities = 12/29 (41%), Positives = 19/29 (65%)
 Frame = -1

Query: 473  ETHDASTEFDRTEKDITPMGGFPHYGVVK 387
            ET  A+++ +R EKD+  +GG PH   V+
Sbjct: 2426 ETPGAASDLNRLEKDLIYVGGLPHSKAVR 2454

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>RUVB_ENTFA (Q839T5) Holliday junction ATP-dependent DNA helicase ruvB (EC|
           3.6.1.-)
          Length = 338

 Score = 29.3 bits (64), Expect = 10.0
 Identities = 20/86 (23%), Positives = 40/86 (46%), Gaps = 5/86 (5%)
 Frame = +3

Query: 132 VSHVRF---DKMTQLILRSSSSLELAI--EPLLLVRGLETAVPKLGRGVDKLELDFLQCE 296
           +SH+ +     + +++LRS+   +  I  E    +       P++   + K   DF Q +
Sbjct: 178 ISHMEYYQEQDLKEIVLRSADIFQTEIFEEGAFEIARRSRGTPRIANRLLKRVRDFAQVQ 237

Query: 297 TRGLLQQGLAEGHHTLLWPDTASLDH 374
           + G + + +A+   TLL  D   LD+
Sbjct: 238 SDGKIDRAIADKALTLLQVDHQGLDY 263


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 93,135,175
Number of Sequences: 219361
Number of extensions: 1982413
Number of successful extensions: 5470
Number of sequences better than 10.0: 60
Number of HSP's better than 10.0 without gapping: 5212
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5414
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5767334219
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result